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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012120 ID=TCONS_00012120|Name=TCONS_00012120|organism=Clytia hemisphaerica|type=transcript|length=1100bp
GAATTACTGTTATACCTTATCGAAAATGATGACTTCGTTCAATTTTCCAT
CGACAAAACTTTTAGCCTCCTACTTTTTGGTCCAAAATTATCCGCCATTT
TGTTATCGCGTGAAATGCGCGAAAGAAACAAATGTAGTTTTGACTTATGA
CTTTTCGATAAATGGTAGTTTGAAGCAATTGCATAAAGTAATGGAAGGGT
TTTTGCTTAGCAACTCACGTGTTTACATTCAAAAGGACAgctttcaaatc
aaaacaaactttacattttatattttattttgcatTGGTTCAGATCATTA
CTGATTACGGTGGTGGCTGGTGCTCctccttttttaatttttttatagag
CTTTTTAGTATCAAATATGCCTCGTGATCCTTACCCTTTTCCAAAATTCG
AAAATGACAATGACTTTTCATCGAGCTCGCAACTGCAGGCTCAAAACCAA
AACAATGTGATGGATTCATCTGACCAATGGAATAGACTTTATGAGAAAAA
GACTTTAGCAAGCTCAAGGCGTGAGGTTTTCCATCATGACCCACAGGCAC
CACGTGATAGTTTAGATTTCGTCATCAAATCGATCTACGATCACCATTCA
GAATTTCTTCAATCCAGCGCTGAAACACTTTACCAACCTGAAACTCTGGG
CTTACCACACGGACGTAAGTTGAAGAATCGAACTACACCAAATACAGAAA
AAATGACCGACATCAAAAAAGACAAACTCAAAATTACCGTGTCTGAAAAA
CGCGAAAATATCGACAGCGTCAAAGGAGCTATACCAAGCCACCACAGTGC
AGCTACCAACAGAGGGTATTTGCGTAAACACGATGGTGGGTTTTATGGTT
GTTGACTTGACATACTACAAAAccaaatatttgtttatataGTTCGAATA
ACATATGAAAtaagtactagttatcgcatgacttcgagtgcaatacgaga
aatattttacgagttccgagatttttccgtaatatttttccgagacttta
ggcgaggaaaaatatcggtaaaatctcggaacgagtaagatatcgagtat
tgcacgagaagtcatgtgataactaatttattgtcgactcaaaaaaattg Run BLAST on NCBI protein sequence of TCONS_00012120-protein >TCONS_00012120-protein ID=TCONS_00012120-protein|Name=TCONS_00012120-protein|organism=Clytia hemisphaerica|type=polypeptide|length=162bp
MPRDPYPFPKFENDNDFSSSSQLQAQNQNNVMDSSDQWNRLYEKKTLASS
RREVFHHDPQAPRDSLDFVIKSIYDHHSEFLQSSAETLYQPETLGLPHGR
KLKNRTTPNTEKMTDIKKDKLKITVSEKRENIDSVKGAIPSHHSAATNRG
YLRKHDGGFYGC Run BLAST on NCBI transcript from alignment at sc0000137:323330..337726- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012120 ID=TCONS_00012120|Name=TCONS_00012120|organism=Clytia hemisphaerica|type=transcript|length=14397bp|location=Sequence derived from alignment at sc0000137:323330..337726- (Clytia hemisphaerica)
GAATTACTGTTATACCTTATCGAAAATGATGACTTCGTTCAATTTTCCAT
CGACAAAACTTTTAGCCTCCTACTTTTTGGTCCAAAATTATCCGCCATTT
TGTTATCGCGTGAAATGCGCGAAAGAAACAAATGTAGTTTTGACTTATGA
CTTTTCGATAAATGGTAGTTTGAAGCAATTGCATAAAGTAATGGAAGGGT
TTTTGCTTAGCAACTCACGTGTTTACATTCAAAAGGACAGCTTTCAAATC
AAAACAAACTTTACATTTTATATTTTATTTTGCATTGGTTCAGATCATTA
CTGATTACGGTGGTGGCTGGTGCTCCTCCTTTTTTAATTTTTTTATAGAG
CTTTTTAGTATCAAATATGCCTCGTGATCCTTACCCTTTTCCAAAATTCG
AAAATGACAATGACTTTTCATCGAGCTCGCAACTGCAGGTATGAAATATT
TTCTTAATTTTGTTTTCCTTTATATTATTTATTTTATTTGACTATTCACT
TATCTATTTGGGGAGAATAATAGTTTTTGTGGTTTGATTTGGTCTCAAAA
CAGCTTAAAATAGTAACTCTTAAAAACGTATGACATGGTCGATACCAAAA
AGTGCCGGGGGGCGGCCATGGACCATGGACTAAAGTGTATACAGATAAAT
AAGGGTGAATGTCACTAGTCCGACAGTAAAAAATAGTCCGAATCTATAAA
ATAAATTTAGAATTTAGAAGTGTTTTTTACCGACGTCACTTTTGTCCGAA
AACGAAAGAATTTAGAGTGTCAAATGTTGAATACTAGGGTTTTTCACTGA
GATAATATTAATAATAATTCATTTTAGCAGCATTTTGACATAATTAGAAA
TAAAGGACCAATCAAATTTGCGCAAAGATAATTTATAGCAAAAAGAATGC
ACCGTCTTTAAGGGTCCCTTTTTGCATGTTCAGCGAATTATGTTATAAAT
AAGGGTTGTAAACCACAAACTTTAATTCCAGCCCCCCCCCCCTAAAGAAG
GGTCGTAAAAACAGCTAAATCCAATTTCTTGACTCTTAAAAGCCTAATCC
TAATAAGCTTCCCAAAATTTAAGAAAAGTTGGGTTTAGGGACCCAACCTC
AAAGTCGGAGCTTTGGATTTTTATAAGAACGTGGTTGCTTATAAAAGATG
TGCTTCCTCTTCGGCGATTCATATTTTGTTTTTGACTCGTTGTCGGACAA
AAGTGTTGTCGGAATACTGACGACCTCCTGATAATAATTGGCAGTGGAAA
TAAGAATGCCTGTAACTTTTGATAGTCAACTATAATTATGAAAATATTTT
TTGCTTGTTTTAGAGAATCAAAAGCACTAAATTTTAAATGTATAATTTTT
TAATTAATAATTAATTCCGGATTACAGTATTAGCGGTTACTGTAAATTTG
TGATTGCAAAAATTAAGCTTTTTTTCTACTTATGCTACAACGTTTATTTG
TACACCAGTGGTAGTTCAACCTTAGATAAAGAAGGTTGTCAAACTTCAAG
GCAAACAGAAACTTCCTTTGGAAGATATCAGAGTCGAAATACCCCTTGGT
AGCACTTTTCTGTGAAATATCAAAGTGCAGTTCTCTGTGTAGCCAAGGTG
TCCAGGTTTCAATTTCGATTAATTGAGAGAGTAAGTAATATTTCAAACCA
GATGGTATATGGTATTGTATGAGAAGACAGAAAACCATTTAATAGTTAGT
TAGGGTTAAAGTCATTTGGTTGATGACCATGGAGAAATAAAAGATACTCT
TGCTGTTTTTCAATGTGCAAGCATTTTGAATTTTCTTTCTCTTCCAGGCT
CAAAACCAAAACAATGTGATGGATTCATCTGACCAATGGAATAGACTTTA
TGAGAAAAAGACTTTAGCAAGCTCAAGGCGTGAGGTTTTCCATCATGACC
CACAGGTAATTTATTTTGCAAGCCATTAGATGAATTTGTAAATTCATTAC
GTTTGGTGTTATCCAAGTAAACCAAATATGGATATCCACTGAGTTGATAA
ACTCGAACTTGTTTAGATTGATTCAATAAATGTAGACTGAGTATCTACTT
CTATTAATTTTCATGATTTCTAGTTGTGAAAATTCTAGGAGTATCTATCA
AAATCTATCTTTAAGTTGTTTGAAATTTCCTGGTCGCAACAATTAAGGAA
GCCTTGCTAAACTTAACAACTTATTTCATAAGTCAATTTCAAACACATGT
TAAAGATCGAATTTTACACTCTAAACAAAAATTTTGTATCCAAACCCCCT
GTTTGGCTGAAATTGCCACACTAAATAGTAAAGCCTTAATCTGCGAAAGA
GGCTGCACTTTTGGTGCAATTTGTTGAAAATAGAAATTACAGAGCAATCC
AGACGAGTACTTTATTTTTATTATCAATTTACATATAAATTAAAGTTGAG
ATTATAATTGTTTGATACTCAAAGTTTCACGCAACTTTTCGTTACGATCT
TCAGTCAAAAAATCTAATATTATCAAAATATTATCAATTTGCAAATTATA
ATTTTATGAAATCANGCAATCCAGATGAGCTGATTTATTTTTATTATCAA
TTTACAAATAATAATTTTATAATATCCTCTTTTTAAGGCACCACGTGATA
GTTTAGATTTCGTCATCAAATCGATCTACGATCACCATTCAGAATTTCTT
CAATCCAGCGCTGAAACACTTTACCAACCTGAAACTCTGGGCTTACCACA
CGGGTAAGTCACTTCAATATACAGATTTCGAATTATATTTTTGCATAGCT
TTTGCTTTGATCCCATGTAATCTGCATGAAAAAAAGTTAAGTGAACAAAA
CAAAAAGCAGTTGTTAGACAAGCAATTTTAGCTCATTTTTTTAGAAATAG
AAAAACATTTTTTGAATGAATAAAAAGAGAAATAAAAACGTCTATAAACA
TTTTATAATGCATTTACACTTGTCGCTGATATTTGTTCGATTGCGTAGTT
TAATTTGAAACATAAAACACGAGTGCTACTTTTTAATGCCTTTAATTTTC
GCAGATGAGATGGAATTTTTATAACATACTTTAATAATTTGTCATTTGAA
TTATAATAAAAATGATGCATTCTTTAGAAAAAGTAACAAAATTGGTTAAC
GACCAACCAAATCCAATAAAAGCTTGTAAAAACTTCATGTCGTCCCAATT
TTCAACTTCACAAGATGCATTTATTTGGAATTTGTTTTGTGCTATAAGTT
TTAATTTTCCCCCCCCCCCCTGGGTGTTTTTCCACTGGCGGCTTAAGCTA
ACAGGGTTAGCAAAACGTCCAATAAAATGCTGAACAGCCAAAAACTATTC
ATATAAATTTGTGGATGAAAAGAGATGGTTACACGTCAATATGTACTTTC
ATTTCCCATTGCAACACAGGAGAAAAATCGAAAAATATTTTGTTTTTCGT
GATCCGCCTATCATCGCTCTTTTGTTCTTTCAAACATGCCCTCGAGCATG
TATCTAGTGGATTAGAAAATTCGTGCAAAATACAAAAGATTTAACGAATT
TTCTCCTGTGTTTTTCTCCTGTGTTGCTTTGGGAAATACAATATTTTTCT
GAAAAGAAAAAATTAACGTGCAGCCATCTCTTTTCATCCAAAAATTACAT
GAACAGTTTTGGGTGGGCTATTCATCGTTTTATCAAAAGTTTAATTCTGT
TAGCTTAAGCTGTCAGTATAAAAACACCCCCTGTTATCAAAGTCTCTTGG
TAGATCGGTAAATAAGTAGGGGCAATTTCTAACAATGGTTTATAGAATAT
TTATCTCAGCTCAAGTTCCAGTATTGATACCCTTGATATCAGGATCACCA
CAAGGAAGAGATCAGGGGGAATCTTTTATTGAATGCTACAGTACAGCGTC
TGTTTTTTCATAGTCATTATAAAAAAACCCGGTCTGGAAGGCTTTTGTTT
CTTTCTATTGCTAACCGTTAGAGCTTGCGTACCTTAAATTGATTTGTTTT
ACATAGTTTTTGATCATGTGATTATAAAATCATCCAATCCCAAGAGTCGA
AAATGGTAACGTGATCAAAAAGTATGCAAATTGCAACTTGTCTTTCATTT
ACAACAAAGGAAAAATTGACAATAAAGCTTAAACGATACATTACCAGACC
AGGATTTTTTATAATGACTATTGTTTTTTTAAGCTTAGAGAGCTACAAGA
CTTTCTTGAAAGGAGTACTGGCAACTATCAAAATATCTTCAATTAAATTG
TTCATTATTTTTAGACGTAAGTTGAAGAATCGAACTACACCAAATACAGA
AAAAATGACCGACATCAAAAAAGACAAACTCAAAATTACCGTGTCTGAAA
AACGCGAAAATATCGACAGCGTCAAAGGAGCTATACGTAAGTTGGTGCTA
TTGATACCTCTATTCATGATATGCACCACTTGAGAGTCTTCTGAGAACTT
TTTTGAGAACTTTTCCACCCAATAAGTCACATAAACAATAGAAAAAGTGA
CGTATTAGGTGCAAAACAAAAGGACAGAAAAGTTGCATAATTTCGTCATT
GCAGTGTTGCATATCATGAATACCATTGATTTCAAAGCCGGGGGGGAGGC
TAGATCCGAAACTCCTGGATGGGAAATGAAGCCACATAAATCACATCCAG
AACACGTGACCTGTGTTTTTTTCAAACAAAAATTCCAAGTGCGGGGAAAA
CATAAGTTTCACTTTTTCTTACTTTGGAAAGGTTGAAGTTTCCTCTCTAG
CCTCTTCGGGGCTTCAAACTCAATGCTCTATATCTTGTTATGGCTTGCTT
TTATAAGTCACTCAATGGGAATGAGAACTTTACGTGAAAAAAATAGTGGT
TGAATTCAGGATACACTGTACACACCTGCGCATTTGCTTACACTAGCCTG
AGCAGCATCTCCATTTTTTAATCACCCGATCTTGTCTGGGCGATATTAGG
CTGCCCCTTCTGATATATTTTGAGGCTGCGTTTTGTGTACGAAATTCTCG
TCTTTGTGTTTTTGAAGTTTGAGTTTTAAAAATTTGATTAGCTTGATTAG
TAATTTTTATACGAGAGATCATTAATTTTAATTAAATCTTTATGGCTAGA
CGTTAATACAATCATTAAATTTCTGAAGCTTTTTAAGAAAATTAAAAAAG
GTCGCCTCAAAGTTGGGGTAACTCTTGGACGGGAATTTCATACGCGATGC
GCATCCCTTAGGACGATATGGGATCATCTGATTCTTCTCTGACTCGCTTT
TTCCTCTTTTTTAGCAAGCCATCACAGTGCAGCTACCAACAGAGGTTATT
CGCGTAAACACGATGGGGGATTTTATGGTTGTTGACTTGACATACTACAA
AACCAAATATTTGTTTATATAATTCGAATAACATATGAAATAATAACATA
AATTATGCTGTAATTTTTTTTCTAATTCTCTTTTTTTGTTTTTCTTTGCA
TTTATTATCTATTCAGTATCGGTAATTTTACTCTGAGCTGAAATCTCAAA
TATCTTATATCATATTTCTGATTAATCGAGATTATCATTTGCGTATTTAA
CTTAGACTCGTCGATCACTGATCAGATATGACAAAAATTTAAGTATTCTC
TTGAGCTTATGAAAAATGTATTTTCCTGATTTTGCCTGTTTTTAGCTTAG
ATTTTTGGGATTTTCGGATTTTCCTAGTCTGGAGCTAGACTACTAATTAA
CATCAGTTTTACTCAAAACTTCTTTTACAGTAGTAGAAGAAAACTACCTA
GAAGTTTGTTTACTTTTCCAGTTTTTGAATTCCAAATTCCCGCACGACTT
TTTTTCTTTTTGACTTTGAGGCAGGATTGCTCCTACGTTTTGTGTTAAAA
GAATGGTGGTCTGGAAATCGAGACTAGGATTTTCCTTAAACTTCTGCTTG
GGAAAATAAGCACTCTTTTATAAGCATTTTTCAGTCTTGTCAAGCCTCAA
CCTAAACATCTATAAGCCTGTTTTCGAAATTTTGTTTACTTTAGAAAAAG
CATGCATTAGTTAACAACGCTAATGATCGTCGTGGCGCGTTGGCAATCTT
TTTTTCTTCACTTGTGGCTTCATAGGCACTTACTTTTACCGATTTGGAAA
GTTGAGCGAAAGTCCTCTCGAAATGAATAAAGATCATAGCGGGTCTCGTT
TTGATATAGAACTACCTAGTGAAATTTACATGTATGGTTCCCAAAAACGT
TTATTTTATGTTTGAAGATCAATTATCTTTCCAACGAGACCTATAACTGT
TCTAACCTCGATAAGGTATGACAACCTTATAACTAGAAAAAGCTTTTATT
CCTATATCTCACCCTCATAAAAACAAGTTTGTGTGGACCTGTCAATTGTT
TTGAAACAGACTTTAAAATATTTTTAAATTCAAAAGATTTTTGTACATAA
ATTTTTTTTATTAAAGTTTTATTTTTTTTGATTTCATATTTTTACATTAT
GTGATTTTGTATCAGTGATTGATTGATTTATTGCAATGCAAATTATATTG
AATGCTTAAAATTGCAGACTTTTATCTAGTTTTTCTAGTACCTTCTGCCT
TTACTGCCGAAAAAAACTTTGAAGGTCTGTGACTATTTAAAACCGTAAAA
CTATAATATCGAAAATCTATTACACAATACAAAAGCTTCATATTCTACCA
GTAAAAAAAATTCCATTAAATTTAAATGAAGGTTGTGGAAATAAAACTCA
AGGGACCTTGATGCTGTAAACTCAATTTATTATTTAATTGAATACTGATC
TAATTGAAACCTTCTTGAAAAATTAAATACTGTCTTGAAAAATTGTTTTT
TCATTTCTCTCTGTCCATAAAATATTTTATTGTTCTGAAGAATTTTCTCC
GTCAGCAGCATCAGCCATATTTCTTTCGTCATTCTGCACGGCTATTTTGA
CAGTTTCGTTTGGAAGATTTCGAAGGCTTTCATCTTCTTCCATGCACCGT
TCAGCAGATTTCATTTCAAACAAACCAGTCATCACAAAATCAAGATGGTT
GTTTCTCTTTATGATCACATCTGTTTTTTTCACAATGATTTCTGTCGCAT
TCTTTGCCAGCGCAAACGAATTTTCTACCATTACTACAATCATATTTTTC
TCCTTTTTGACTGGCGTGGTTTATATTGTTTTATATTGTAAATATTGTTT
AACCCTTTTGCTTCTATGGTTAGTTTGAGACTGGCTATAAATAAAGTTAT
CCAGGAGGTTTTTATTCAATCATATATTTATGTTTTTGTAAGTGCCCGAC
TGACATTTTTGGAATTATCAATTACTAAATAAATAGTACTTAATATCTCA
AATACCTTGATAGGAATCAACTTATTGCCGAAGTCAACTGTACGGAAGCT
TTTTAACCCTGTTTACAGAACAATTGTTTTTCTAAGAATTTCTAAAAAAT
TTTTGTGGTGTGTTTTTTTGTTGTCATGAATTCATGAATCCAGATTTTAG
CGTTAACATTCTTGTCTTTTTATACACAGGGAAGTTCTAAAATAAAATTT
ATGCTTCACTTGCATAAATTTGGTGATCATATTGATTTATTGACTTTATC
TTTGCAAAGAAGTTATGAAATGTCAATAACAAATGTTGAATGACAATTTC
ACACTTTTTGAAATCACGTTTTTCTTGACTTTGGCGAGTTTTAGCGGTAA
CCAGATCTCAGTTCAGCCTTCCTAAAATCGAATTTTGTTCATATTTACCA
AAGAAAACGCTAAAGTTTGGCTGCATTTTACCTAAAGTCTATTCACGATA
AGTGTGCACCCTTTTTTCTTTTACCTATAACTTTTGAAGGAATTCTTCAA
TCTTTATAAATTTGGTATCGTTGGAGAGATATTTGTGAGTGTATATATCG
TATATAATAAATTTATGAAAAATGTTCGCAATTACCTGACAATGTTTACA
TTTATTTTTAATGGGTAAAGAAATCTAACCCTAAAACAAACAAGAAGCCC
AAGGGCATGAAGGCCCAGCATTAAAAGTTTTGTTTCTAAATAAGAGTGAT
AAAGTTTGCTTACTCATCAATTTTAATTTACAAGCCGGCACGAATGTGGA
GCAAGATTGGTCAGAAAAGAGGAAGAGAAAAACATTTTTTTGCTTATATT
AGCACAATATAACAACTGATATAAACATGTGTCTGACATATGAAACGGGA
ACACTTATTTATGTAAAAATAAAACTTTTGAAAAATCTTTAACAAACATG
ATTGTGTTAGCTCTAACTAAAGGGAGCAAAAACAAATGATAAAAAGTAAA
ATTAAAAAGAAACCAGCCTCGAAAAAATTTTCCTGCAACCACAGTGGCTG
CAGCCTCAGCAGCACTCAAATAATGCAAAATTTGTATATTGCTGCAGTCC
ATAAAAACTGAACAATTTGGAGTTATTGGCTGAAATTTTGTACAGTGACT
CACTTTCAGATGCAGATCATAATTCAGTACTCTTAGGTGCCAAATAAACG
GGCCCCCCACTTGTTAATTTTTCGAAAATTTTCCAATTTTTCATGTTTGC
ACTCATCCTTGTCCCAAGGGACCCAAAAAAACCAAAGAGTCTTTAGAATT
CAAGGTTTAATTTGGAAATTTTGTAGNTATTCGACCCCCCCCCCCCCGTT
TATTTGGCACCTAAGAGTAAGTGTTTTTCCCAAAATGAGGCTATTTCAAG
ATGGTGTCTGACAGGGTGGTGCCAATAAGCCCTTTTGACCGTTTTGGACT
GAAATTGCTTGATTTTCATAGCTAAATGTATCTGAAAGTCCTTATTGTCT
ATTTTTTAAAATCATTATGACATGCTGAAATTGTGTACAAAATTTGAGCT
TTTTAGTTCAATTTTACCAGGAGAAACAAGCAAAAGAAATTTGCAAAATC
AGACAAAACCGCGATACAAGCTGCAACACGGAGAATGCTCAAAATGCCTT
GCGACAACTTTTTCAAAACAGTAGATTTGAGCCCGGCTCTTCCCAACGAA
ACTGCAAAAAATAGCTGTAGAGAATTACGAAAGAAATATGGCTGATGCTG
CTGACGGAGAAAATTCTTCGGAACAATAAAATATTTTATGGATATAGAGA
AATGAAAAACAATTTGTCAAAGCAGTATTTTACTACTGTATATTCTTTTT
TCAAAAGAAAACATCAGTGTTCAATTAAATAAAACACAACAAGGTGTCGG
TCTGTCTGTGTATCCCTACAGTATTATTACATAAAAATTAGAAGACGTGT
TTAACCTACAACTTTTCGAACGTAGTAGCGCGATCAGACTGCAACGGTTT
TAGGATGGTAAAAAAAAAATTGGTGTATTTTCTCTCTTTTTGGCCGAAAA
ATGCCAATTCTAAGGTGTAAAAAAGCAAATGGGCGTCGAATTATAGTAAA
CAAAGGCTTCTTTTAGTGCCCTTTGTATTTCGGCGCCCCTCAAAAAAATC
GGCCGCTGGATTTACCCATCGCACGTGGGTTAAAATTGCTCTTGGATTTG
TGGGTCAAAATCGCTCGTGGGTCAAAATTTCCCCGTGGGTCCAAAATTTT
CCGTTGGTCCGAAATGTTCCAAAAATCCCAATACTGTAAGATCGTGTAAG
ATATTTATGGTATTTTAAGCAGCGAGCTAGCTGTAAACATTGTTTACATT
TCGCTGTTTCAAGTCTATTCTTAAATCCATCATCTTCTCATTCAGAGAAA
TATCGTATCAATTCATTTAAACTTCCCCTCCCTTATAGAGTCTGCTAAAT
TACGTGGGTTACGTGGGTTCGTGGGTTAAAATATCTCGTGGGTTCGTGGG
TCCGAAAAAAAATCACGTGGGTTGAAATTGCTCGTGGGTTCGTGGGTTCG
TGGGTCAAAATCGCTCGTGGGTCCAAATTTTCCCGTGGGTCCAAAATTTT
CCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCAAACCGAGGATAAGTAGTAAAGTTGAG
AATTAAAGGCTGAGAATATTGACACAAAGCTTAACATAATGGCTTGGTGC
TGAGAATACCAAAATGTGAAGGGTATGGTATGTATGGTATTTTAAGCAGC
GAGCTAGCTGTAAACATTGTTTACATTTCGCTGTTTCAAGTCTATTTTTA
AATCCATCATCTTCTCATTCAGAGAAATATCGTATCAATTCATTTAAACT
TCCCCTCCCTTATCTTTTGTTTGCACAAAAATTGAAGGAAAACTACTCAT
CAAACAACAGAAGTTATAACTATATATCTATTTTTTACAAGAAAAATTCA
ATGAAATTATTCTTGTCTGAAAAGTTTCGCTATTTTATTTCGAAATAAAT
CGTATATCCTTATTATGATTAGGCTTCTGGCATCCACTAACGGATTCGTG
CTCCTTATAGAGGATGCTTAAGGGCTCTGACCATAGTGAATTTTTCATAA
TTGCCGTGTTTAAAATGTGTTTTCTGACTGATGTAACCAACAAAACTATG
GCATGTTATACATTTTCTGTTAGACAAACTATTCCTGAATCTGAAAATTC
AAAAATTGCATTGAAAAAGTTTGATGAAGAAGAAAATCAAGACTTTTGCG
AGGAAGAATATTTCAACTTTGAAGAGCTTAGTTTCGGCGAAGAAAAAACA
TTTTGAAAAAATTTTTGCAGTAGTTGGTGTATCTTTTACCGAACAATAAA
AGTTTTTGCGGAAAATTTTTGTAAATGCTTCTTTGTCTCGAAATCTTCAA
AATAGTGGTTTTTCATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNATATATAAAGGCAATTCTTTGTTAAAAGTGTTAAGGAACCTGAAATA
TAACTTTTATGTTCAAATACCAAAATCAATTTTTGGACTATGGTCAGAGC
CCTTAATAAGCGATATTTCCTTTGTCCAGAGATTTGCCGCCTTTAGCCGG
TATACGGCTAAAGACATTTTTAGCTGGCGAGTGTCTACAAATATGACATT
ACGTAATGTTTAAATTTTCTGTGAGACACCAAATCATAGATTGGAAAATA
TATTTGGATTTCGAAAAAAAAAGTAGGCGAAGGGAAGTTGGCATCTTTTT
ATTCCTCCTTTCTTGTTTAATGTGATTTTTTGTAAAATATTAGAAATTAG
ATTTATTGAATTTAAGTGCCCTGATGTATCTTCTGTGTGCACCAACAAAA
TTTTGCTTCATAAAACTACATTTCGATGCTTGAATTTGGACTTGTATGAG
TGTATAATTTTTTACCACACTGGGGATTCGTTGATCACTTTGGCTCCAGA
TAATTGTTTTGTCAGTTCTACGGATATGTTGCAGATTATTTCATTATTGA
ATATTTCTGACATTACTTCTTTATGATTCTACAAAAGGGAGTGTTGTTAA
AACAAACAAAGAACTTTTTATCAGCATTTCACCTTTTAATACTGTGTGGC
CTTTGTATCTTTTCAGGTACTTAGCTTCAATTCTTTGAAGAGATTGGAGT
GTTTCTGGTTGTTTTCTTTCACTTTTGTGTTCGTAATTGTATTTTTCGAG
CTTCGACCGAAGAGCTGCTGATGGAAAAGTTTTGATAAATTTACAGACCA
GATATCTTAGATTTCCTTTGCGAACCGGAAAGCGGTTGGTAGATCATTAA
GCAGACCTATACTACCTGGGGTCTTGTAGAGGTCTGCGATTCAGACTATA
TTATGATATGATACATTCATCCGTTTTTGTGACTTCTAAAGTCTTCAATT
TTCAGTCTAAAATGTTCTTAATTTTTCAGACTACTCTAAATCGACAATAT
CATGCAAAATAAAGGACACTTAAAATTGGTAAAATTTGGACAATACTCTC
GGGTACCTAATAGCCGGGGGGGTTGGAATAAATCTCAAAACTTAATAAGT
AACTTAAAAAATGTCCTGGGTGGAAAATTTTGAAAAAGAGTCTAATACAG
CAGAATTAGGACAAAAGAGGGAACTTCCAAAAACATTTTCCCAAAAATTA
ATAAGCGGGGGGGTTGGAATAAGAATGTCCTGGGTGGAAAATTTTGAAAA
AGAGTCTAATACAGCAGAATTAGGACAAAAGAGGGAACTTCCAAAAACAT
TTTCCCAAAAATTAATAAGCGGGGGGGTTGGAATAAGAATGTCCTGGGTG
GAAAATTTTCGAAAAATTAATTAACGGGGGGGGGACGGCTATTAAGTACC
CGAGAGTACTTGACTCTCGATTTTAGAAAATCTATCCCTAAGTTCGGTTA
AAACTGCTTGAAAAGAGGAAAGAATTATAGTTTCTTGTCATTTTTTCCAA
ACTGAGGTTGGGCATGTTCTTACGATGCTCTTAATTTTTCAATGTTCTTA
TAAACTGGGCTCTAATAAAAAAGACGTGTACCAGTTTGTCGGTATTGACC
TTTTTTTGCGTCGGTATTTCGGTGATCAAAAAAAAATGTGTCGGTATTTC
GGTGTGAGAGATGCTTTTCGATGATGGAAAATGTTAAATTTTCAATCGAT
GATACAGTAATTTTGCTTAAAACGTCGGAGAAAAGTGCTAAATCGAGGGC
TACCCCTCTCATCCTCTTATCTCATATTAGAATTTAAAAAAAAAAAACAT
GAAAAAATGTCGGTGGTGTCGTAAAAAATGTGTTGGTATTGCGGTGATCT
TGTAAAAAATTTTCCCCCCCCCCCCCCTATAATGGACGAAAAGATAATGG
GCACAAGATTGACTGTTCTAAGAAATTCCTGCATATCATGAATACCATTG
ATTTCAAAGCTGCCCCCCCCCCTCCCCGAGATCCGAAACTCCTGGATGGG
AAATGAAGACACTTAAATCCCATCCAGAACACGTAACCTGTGTTTTTTTC
AAGCTAAATTTCTTAGTGCAGGGAAAACTTAAGTCTTCACTTTCTTTTAC
TTAAGAAAGGTTGAAGATTCCCTTCTATATCTTGTTATGGCTTGCTTTTA
TAAGTTACTGAATGGAAAACTTTTCGTGAAAAACATTTAAACGGAAAAAA
ATAGTGGTTAATTCAGGATACACTGTACACACCTGCGCATTTGCTTACAC
TAGCCTGAGCAGCATCTCAATTTTGGCTGGGCGATATTAGGCTGCACGCA
CCCCCTCTGATATGCTTTGATATAGAGGCTGTGTTTTGTGTACAAAATTC
TCGTCCGAGAGTAGCCCTCATCTTTGTGTTTTTGAAATTTGAGTTTTAAA
AATTTGATTAGCTTGATTAGTAAAGTTTAATATAATAAGAGATCATTGAT
TTTCATTAATTCTTTATGGCTAGATGTTAATACATTAATACAATCATTAA
ATTTCTGAAGCTTTTTAAGAAAATTAAAACAGGTCGCCTCAAAATTGGGG
TACGTCTTGGACGGGTATTTCCCTTAGGACAATATGGGATCATTTGATTC
TTCTCTGACTCGCTTTTTCTTCTCTTTTTAGCAAGCCACCACAGTGCAGC
TACCAACAGAGGGTATTTGCGTAAACACGATGGTGGGTTTTATGGTTGTT
GACTTGACATACTACAAAACCAAATATTTGTTTATATAGTTCGAATAACA
TATGAAATAAGTACTAGTTATCGCATGACTTCGAGTGCAATACGAGAAAT
ATTTTACGAGTTCCGAGATTTTTCCGTAATATTTTTCCGAGACTTTAGGC
GAGGAAAAATATCGGTAAAATCTCGGAACGAGTAAGATATCGAGTATTGC
ACGAGAAGTCATGTGATAACTAATTTATTGTCGACTCAAAAAAATTG Coding sequence (CDS) from alignment at sc0000137:323330..337726- >TCONS_00012120 ID=TCONS_00012120|Name=TCONS_00012120|organism=Clytia hemisphaerica|type=CDS|length=2445bp|location=Sequence derived from alignment at sc0000137:323330..337726- (Clytia hemisphaerica)
CAAGCCACCACAGTGCAGCTACCAACAGAGGGTATTTGCGTAAACACGAT
GGTGGGTTTTATGGTTGTTGAACGTAAGTTGAAGAATCGAACTACACCAA
ATACAGAAAAAATGACCGACATCAAAAAAGACAAACTCAAAATTACCGTG
TCTGAAAAACGCGAAAATATCGACAGCGTCAAAGGAGCTATACGCACCAC
GTGATAGTTTAGATTTCGTCATCAAATCGATCTACGATCACCATTCAGAA
TTTCTTCAATCCAGCGCTGAAACACTTTACCAACCTGAAACTCTGGGCTT
ACCACACGGGCTCAAAACCAAAACAATGTGATGGATTCATCTGACCAATG
GAATAGACTTTATGAGAAAAAGACTTTAGCAAGCTCAAGGCGTGAGGTTT
TCCATCATGACCCACAGATGCCTCGTGATCCTTACCCTTTTCCAAAATTC
GAAAATGACAATGACTTTTCATCGAGCTCGCAACTGCAGCAAGCCACCAC
AGTGCAGCTACCAACAGAGGGTATTTGCGTAAACACGATGGTGGGTTTTA
TGGTTGTTGAACGTAAGTTGAAGAATCGAACTACACCAAATACAGAAAAA
ATGACCGACATCAAAAAAGACAAACTCAAAATTACCGTGTCTGAAAAACG
CGAAAATATCGACAGCGTCAAAGGAGCTATACGCACCACGTGATAGTTTA
GATTTCGTCATCAAATCGATCTACGATCACCATTCAGAATTTCTTCAATC
CAGCGCTGAAACACTTTACCAACCTGAAACTCTGGGCTTACCACACGGGC
TCAAAACCAAAACAATGTGATGGATTCATCTGACCAATGGAATAGACTTT
ATGAGAAAAAGACTTTAGCAAGCTCAAGGCGTGAGGTTTTCCATCATGAC
CCACAGATGCCTCGTGATCCTTACCCTTTTCCAAAATTCGAAAATGACAA
TGACTTTTCATCGAGCTCGCAACTGCAGCAAGCCACCACAGTGCAGCTAC
CAACAGAGGGTATTTGCGTAAACACGATGGTGGGTTTTATGGTTGTTGAA
CGTAAGTTGAAGAATCGAACTACACCAAATACAGAAAAAATGACCGACAT
CAAAAAAGACAAACTCAAAATTACCGTGTCTGAAAAACGCGAAAATATCG
ACAGCGTCAAAGGAGCTATACGCACCACGTGATAGTTTAGATTTCGTCAT
CAAATCGATCTACGATCACCATTCAGAATTTCTTCAATCCAGCGCTGAAA
CACTTTACCAACCTGAAACTCTGGGCTTACCACACGGGCTCAAAACCAAA
ACAATGTGATGGATTCATCTGACCAATGGAATAGACTTTATGAGAAAAAG
ACTTTAGCAAGCTCAAGGCGTGAGGTTTTCCATCATGACCCACAGATGCC
TCGTGATCCTTACCCTTTTCCAAAATTCGAAAATGACAATGACTTTTCAT
CGAGCTCGCAACTGCAGCAAGCCACCACAGTGCAGCTACCAACAGAGGGT
ATTTGCGTAAACACGATGGTGGGTTTTATGGTTGTTGAACGTAAGTTGAA
GAATCGAACTACACCAAATACAGAAAAAATGACCGACATCAAAAAAGACA
AACTCAAAATTACCGTGTCTGAAAAACGCGAAAATATCGACAGCGTCAAA
GGAGCTATACGCACCACGTGATAGTTTAGATTTCGTCATCAAATCGATCT
ACGATCACCATTCAGAATTTCTTCAATCCAGCGCTGAAACACTTTACCAA
CCTGAAACTCTGGGCTTACCACACGGGCTCAAAACCAAAACAATGTGATG
GATTCATCTGACCAATGGAATAGACTTTATGAGAAAAAGACTTTAGCAAG
CTCAAGGCGTGAGGTTTTCCATCATGACCCACAGATGCCTCGTGATCCTT
ACCCTTTTCCAAAATTCGAAAATGACAATGACTTTTCATCGAGCTCGCAA
CTGCAGCAAGCCACCACAGTGCAGCTACCAACAGAGGGTATTTGCGTAAA
CACGATGGTGGGTTTTATGGTTGTTGAACGTAAGTTGAAGAATCGAACTA
CACCAAATACAGAAAAAATGACCGACATCAAAAAAGACAAACTCAAAATT
ACCGTGTCTGAAAAACGCGAAAATATCGACAGCGTCAAAGGAGCTATACG
CACCACGTGATAGTTTAGATTTCGTCATCAAATCGATCTACGATCACCAT
TCAGAATTTCTTCAATCCAGCGCTGAAACACTTTACCAACCTGAAACTCT
GGGCTTACCACACGGGCTCAAAACCAAAACAATGTGATGGATTCATCTGA
CCAATGGAATAGACTTTATGAGAAAAAGACTTTAGCAAGCTCAAGGCGTG
AGGTTTTCCATCATGACCCACAGATGCCTCGTGATCCTTACCCTTTTCCA
AAATTCGAAAATGACAATGACTTTTCATCGAGCTCGCAACTGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012120-exon-sc0000137-1575043694:337289..337726 | TCONS_00012120-exon-sc0000137-1575043694:337289..337726 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1575043694:335822..335929 | TCONS_00012120-exon-sc0000137-1575043694:335822..335929 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1575043694:335024..335139 | TCONS_00012120-exon-sc0000137-1575043694:335024..335139 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1575043694:333391..333512 | TCONS_00012120-exon-sc0000137-1575043694:333391..333512 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1575043694:323330..323645 | TCONS_00012120-exon-sc0000137-1575043694:323330..323645 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1510915933:337289..337726 | TCONS_00012120-exon-sc0000137-1510915933:337289..337726 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1510915933:335822..335929 | TCONS_00012120-exon-sc0000137-1510915933:335822..335929 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1510915933:335024..335139 | TCONS_00012120-exon-sc0000137-1510915933:335024..335139 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1510915933:333391..333512 | TCONS_00012120-exon-sc0000137-1510915933:333391..333512 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1510915933:323330..323645 | TCONS_00012120-exon-sc0000137-1510915933:323330..323645 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1491911889:337289..337726 | TCONS_00012120-exon-sc0000137-1491911889:337289..337726 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1491911889:335822..335929 | TCONS_00012120-exon-sc0000137-1491911889:335822..335929 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1491911889:335024..335139 | TCONS_00012120-exon-sc0000137-1491911889:335024..335139 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1491911889:333391..333512 | TCONS_00012120-exon-sc0000137-1491911889:333391..333512 | Clytia hemisphaerica | exon |
| TCONS_00012120-exon-sc0000137-1491911889:323330..323645 | TCONS_00012120-exon-sc0000137-1491911889:323330..323645 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000137 | supercontig | sc0000137:323330..337726 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR022179 | DUF3695 |
Blast
BLAST of TCONS_00012120 vs. Swiss-Prot (Human)
Match: CA194 (Uncharacterized protein C1orf194 OS=Homo sapiens GN=C1orf194 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.266e-20 Identity = 52/167 (31.14%), Postives = 93/167 (55.69%), Query Frame = 1
Query: 373 RDPYPFPKFENDNDFXXXXXXXXX----XXXXVMDSSDQWNRLYEKKTLASSRREVFHHDPQAPRDSLDFVIKSIYDHHSEFLQSSAETLYQPETLGLPHGRKLK---NRTTPNTEKMTDIKKDKLKITVSEKRENIDSVKGAIPSHHSAATNRGYLRKHDGGFYGC 852
RDP+ P +ND+ + + + N ++ + W+RL T+ S RR+ ++ DP+ P+D LDF + ++Y+HH+ ++ +E L +T + K++ TP T +T + ++ ++ K+E+I S++G+I S H+AATN GY RK DGGF+
Sbjct: 5 RDPFQQPTLDNDDSYLGELRASKKLPYKNPTHLAQQQEPWSRLNSTPTITSMRRDAYYFDPEIPKDDLDFRLAALYNHHTGTFKNKSEILLNQKTTQDTYRTKIQFPGEFLTPPTPPITFLA--NIRHWINPKKESIHSIQGSIVSPHTAATNGGYSRKKDGGFFST 169
The following BLAST results are available for this feature:
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