TCONS_00012122 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012122
Unique NameTCONS_00012122
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1008

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012122 ID=TCONS_00012122|Name=TCONS_00012122|organism=Clytia hemisphaerica|type=transcript|length=1008bp
GTTTTTTTAGTGATAATTAATTAAAACAAGGATGTTTCTCACAAGAACTG
AATACGACAGAGGTGTCAATTTGTTCTCACCAGAGGGAAGATTATTCCAA
GTAGAATATGCGATCGAAGCTATCAAGctcGGCTCAACAGCCATTGGGAT
ACAAACATCCGAGGGTGTTGTATTGGCTGTGGAAAGAAGAATTACCTCAC
CGCTCATCATCCCTAAAAGTATCGAGAAAATCTTCGAAGTTGATCAACAC
ATCGGATGTGCAATGAGTGGATTGATCGCAGATTCTCGAACCATGGTTGA
CAAAGCACGTGTTGAAGGCCAGAACCATTGGTTTACGTACAACGAGAAGA
TGTCCGTCGAAAGTTTGACGCAATCACTTTCAAACTTGGCATTGGCTTTC
GGTAATCGAGACTATGATAAAGGTGCAATGaGTCGACCATTTGGTGTTGC
GTTGCTCATCGGTGGAATCGATGAAAACGGTCCTCAATTATTTCACTTGG
ACCCTTCTGGAACTTTCCTACAATACGATGCAAAAGCTATCGGATCAGCC
AGTGAAGGAGCTCAACAAACGCTACAAGAAGTCTATCACAAGTCGATGAC
GCTGAAGGAAGCATGCAATCAAGCACTGACCATCTTAAAACAAGTCATGG
AAGAGAAATTGACCGCCACTAATATTGAGTTGGCAACGATTACAGTAGCC
GATAATTTCAAGATGTTCTCCAAAGACCAGTTGGAAGAATTGATCAAAGA
GATCAACAAACGaatgaaaattcttttcaaaacgcCACAAAATCGAGGTT
AAACTTAAACTTGGTTTAACTTATAATGATAATTCAAAGGGAACGGAGGG
CAAGGGTTTAACCAAGTTTTATGATCAGGTATTTTCTTGTATTAGAATTT
TTAATGCCATCATTTTCATTAGCGATTTAcctgtaaagttttttttggaa
agaaatatttaattattttgaaggaaaaagaaaattgaaatttaaaaaaa
ttaacaac
Run BLAST on NCBI

protein sequence of TCONS_00012122-protein

>TCONS_00012122-protein ID=TCONS_00012122-protein|Name=TCONS_00012122-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MFLTRTEYDRGVNLFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAV
ERRITSPLIIPKSIEKIFEVDQHIGCAMSGLIADSRTMVDKARVEGQNHW
FTYNEKMSVESLTQSLSNLALAFGNRDYDKGAMSRPFGVALLIGGIDENG
PQLFHLDPSGTFLQYDAKAIGSASEGAQQTLQEVYHKSMTLKEACNQALT
ILKQVMEEKLTATNIELATITVADNFKMFSKDQLEELIKEINKRMKILFK
TPQNRG
Run BLAST on NCBI

transcript from alignment at sc0000137:372716..384973-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012122 ID=TCONS_00012122|Name=TCONS_00012122|organism=Clytia hemisphaerica|type=transcript|length=12258bp|location=Sequence derived from alignment at sc0000137:372716..384973- (Clytia hemisphaerica)
GTTTTTTTAGTGATAATTAATTAAAACAAGGATGTTTCTCACAAGAACTG
AATACGACAGGTAAAATTATTTTGCTATTTACTCTAGTTTATTTAAAGCT
ATAAAGCTAAGCTTTTTTTAAACTAAGTCGCTATTATTTGCTTACTCATC
AATTTTAAATTTCATGCTTTTCCACATTAGATTGCAATGGATGTAGATAA
ATTGGTTAGAAAAACATTTTTTGTAATTGAACACAATATAACAATAGCAA
GACACCGCACTGATATAAAACATGTGTCTGATATGAAACAGGAACACTCA
TGTAACAATAAAACCTTTAATTTTAGATAGAATATTTTTTTGTATGTCAA
ATCCATAAAGGTTTGTATAATTGAAAATTATTTAGAATATTCTTGGAAAA
TCTTTCTCACAATGTTTTTCCAGGAGGATGACTTTTTAGATTTCTGAGAG
TGATCGCACACTCTAAAGTGATATTAATATCAAGTTATAACTTTTGGTTC
TTCACTTTTTAAGGGTTAGAGTAAAAGGTATTATAACAGGGGGGATACAG
TCGAAGGGTACTACTAACCCTGATTTTCAGGAAAATTTGTTTTAGGTTCC
ACCACCCCCTCATAGCTTCAGCCCCCCTTACTTTGGGGGGGGGGCTAAGA
AATATTTTGGCCTTTAAAGAGCCCGGGGGCTAAAATTACCAAAATATTTG
GGGGGACCTAGATTGTTGGGGGGGGGGGTTAAGAAATATTTTGGCCTTTA
AAGAGCCCGGGGGCTAAAATTACCAAAATATTTGGGGGGCCCTAGATTGT
TGGGGGGGGGGGTTAAGAAATATTTTGGCCTTTAAAGAGCCCGGGGGCTA
AAATTACCAAAATATTTGGGGGGCCCTAGATTGTTGGGGGGGGGGGTTAA
GAAATATTTTGGCCTTTAAAGAGCCCGGGGGCTAAAATTACCAAAATATT
TGGGGGGCCCTAGATTGTTGGGGGGGGGGGTTAAGAAATATTTTGGCCTT
TAAAGAGCCCGGGGGCTAAAATTACCAAAATATTTGGGGGGCCCTAGATT
GTTGGGGGGGGGGGTTAAGAAATATTTTGGCCTTTAAAGAGCCCGGGGGC
TAAAATTACCAAAATATTTGGGGGGCCCTAGATTGTTGGGGGGGGGGGCT
AGAGGATCTGACTGAGACTCTGGGGGCTGTTCAGCTAATTTCAAAAGATC
TCTTATCTTACTATTAAATCAAATATAAAAAGTAAAAGATTTGTAAACAT
AAATATTAATACAAGTAAAATTGAGTTTTCATTTATCAGTACTCTGTACT
CGCATATATTTTTTATTGACTTCTCTACGGGGGCGGGAGAACAATGTTTT
TGTTTTTTCCCCAAGTGTTAGGGTACCTAGCGCAAGGCAATTTTTTGGGG
GAGCTAAATTGTTGGGGGGACCTTACTTTGTTGGGGGAGCTAGAAACCTG
GCTGAAGCTATGTCCCTTTTAGCTTTTAGTACCTGGTAAAAAAAGGGACC
CACGCCTTATTTTAGAAGCTTGTTACCAAGGAAAATATAGATTGGCAAAA
TTTCCATTCCGTTTTGACAAAATATCCACTTTACCCACCAAATACCATAA
TTCAGTACCAGATATTAGTTATTAGCTTGAAATGAGTGAAATAAATTGTG
TAGTACTGGGTAATAACTTTTTGAGATAAAAAACTAGACATCGCCACCCG
GCCACGAGTCAGTATCCTGCAGCTGTACACCCCCTGCTTATAAAACACTC
TTTATTAAAAATTAATCAATATGCATTTCAGTAATTAGTTTTTACAAAAC
AAGGAATGGGGTATAATGAGATATTACAAAAGGATTTGACCGGACCAGAC
CAGTACGCTGTTTTCAGTTTGAAGAAGAAAATATCATCTTATATGTAATA
TAATGCATATAAAAGAGAACTTTTGAGTCAGATTTCTAAGAATCCTGTTC
TTCCTCGCTGGTCACAATTATTACCTATCAAACAAACTTTCTTTGAACTT
TCAGATAATTTCTTTACACCAAGCTACCTGTTTATTTTGTTTCGTTTTCA
CATTGTAGAGGTGTCAATTTGTTCTCACCAGAGGGAAGATTATTCCAAGT
AGAATATGCGATCGAAGCTATCAAGGTATGTATCTTGTCACATACCTGTT
ATAAAATCTTCATTCTATTATCTGTACATATACAGCAACTCTTGAACCTC
TACACTAAACAGGCAAGCTTTCTGATAACAAGCCCTTATAAACAACTCCC
AAATTTCCCATTGCATCAAATTTTAGTTCCCCGTACCTGTTCAATTTATG
TATCATACGTCTCCATTAGGTCTAACTTTTCAACAAATAGTTGCCATTAA
CCTTTTTTATCTGAATTATTCAGTTACTACAGTTTGTAGCTTACTACCTT
ATCGGCCCTTTTTACGCAGGCCCCTTTTATGCAGGCCCTTATTCCGCCAA
AGCCTAATTTTGGGCTTGCGTCAATTAGGCGTAAATAACACAAAAACTTG
TAAAAATCGTTATTCAGGCTTCAAAACAGTCAGTATTAACTAAAATTTAC
ATTATAATGTCATCTTTCATCTTGCCACAAAGGATGGGCGTAAAAAGGGC
GGATAAGGTATATTAAATCTCATTTTCAGCTCGGCTCAACAGCCATTGGG
ATACAAACATCCGAGGGTGTTGTATTGGCTGTGGAAAGAAGAATTACCTC
ACCGCTCATCATCCCTAAAAGTATCGAGAAAATCTTCGAAGTTGATCAAC
ACATCGGTGAGGATTTGTTTTCTCGTTACCGCTCACACAAACAGAAACCA
ATTTTAACAGCGTTCAGACCAGAGTACCTAATTCAGGACCTACTAGAGAC
CATCTTACTATCTCTAATTCAATGATCTTCGAGGGACCCAAAATTGTCTT
CGAATTATAGCAAGATTCTAATTACAGAGAATAATTTACACCATTATCCA
ACTGAGGGGACAAATATTATAGTTCGAATTACAGAAAGTCTCAAATAATA
GAGGTTCGAATTAGAGAGAGTTGACTGTACTAAATCTTGCAGATGGTTTA
GGATGGACTAGGGTGGAAACCTTTGGTATTATTCCTTTAAAGGGACATAA
AAGTACTGACGAAATTTGTAAACAAACCGTATGCAGTGGGATACAAAATC
AAAACAAATATGGCCGATTTTGATTGTTTCAATTGTTTTACAAGTTTGTT
TTGGACACGTGATTTTAATTGTTCTCTTTGGTGACACGTGGTTCGCGCAA
TGTTTACATTTTACTACTTTTATGTCCCTTTAAAGTAAAGACCTTGGAAA
GACCTTTCCAAAGATCCTAGCATTCCTAGCTGGTACACAACGTTGTTTCA
ACGTTCATCTAACGTTATATGGACGTTGTGAACGTTAGATGAACGTTGAA
AACATTTCTCCATTATTCATTAGGATGTGCAATGAGTGGATTGATCGCAG
ATTCTCGAACCATGGTTGACAAAGCACGTGTTGAAGGCCAGGTCAGTTCA
CTTTTGAGTCCATTTTAAAGATTTTTCTTTGAGCAAGATTAACATACCTA
ATTTTTACGACAGTCCCTCTATCTTTCTTAAATTGGAAAAGTTTTAAATC
GAGATTAGTCACAGTTGATGAAAGTATTAAAGTTAGTAACTTTTATCGAG
TTATTATTCGAGTCTTCCTCACAAATTTTAACAGAATTTCTTTTTCGCCA
GTCACTATTCCCCTCTAACCTCTATCTCTCTAACTTGGGATTTGGGATTT
CAGGCATTTAGCATTTTGAGGGGAAAGTAAAAGTGAGCAAGTAAAAGCAA
CCCTTTTCAAGGTTTTTAGGGCTCACTTTTTGCAAATTTGACCTAATAAT
TATAATCCTTTAAAATTGTCGATTTAATTTTCTTCCATAGAACCATTGGT
TTACGTACAACGAGAAGATGTCCGTCGAAAGTTTGACGCAATCACTTTCA
AACTTGGCATTGGCTTTCGGTAATCGAGACTATGATAAAGGTGCAATGGT
ATGTTGTTCAATTTTATCGGGTTAAATATACATTCTCTTTAAAATTAACC
TTTTGTATGACGTACAAGACCTACATGAGGAATTCTAATATTGAAGCAAG
GATTGATTCGATTCTAGTATTGATCAGAACTTGATTTTTCCCGAGAAAAT
AATGTTGTCTCTCTCCTGTAGTTGATTTCCTTCTTAACCCTATTTATCTC
AGGCTTTTTTGAATGCAGTATACGAAGGATTAGAGGCTGGAATCTACCAG
GTGTCGAAAACCTATGACCTAGATGTGCTGTGATCATGAAACTTTCAAGA
AATGTTCCTTGCCATAAAAAGGAAACCCATAGAAAAAAATTACAGTTGAT
GATGTTCCTCATATAGGTGGTAACGTCATCACAAAGTTATCACCTGTCGT
CATAAGTTGGTCGATTCGCCTCAATATCAACACCTTAATGCCTCAACGCC
TCCATGCTCAACGCCATCAAACCAATCAGTTTGTTTTTATTTCTTTCAGA
GTCGACCATTTGGTGTTGCGTTGCTCATCGGTGGAATCGATGAAAACGGT
CCTCAATTGTAAGTTGTTTGTTGTTTGTTGTTGTTAGTTGGAGTTGACTC
TTTATTACGATCTACAAGCGATCAATAATTTTCTTCGAATGATAGAAAGA
TTTGGATCACAGAGAGACTATCATACACGACTTTCCAGGTTGAGGGGACT
AATCTTTTAGTTACAGAAAGATTCAAATTTAAAGCCTAATTGTTTTTCTG
ATCAGGGTATTTTCTTTGCACTTTGGAAGGAAAATTTGTCAAAAACCCTG
TATTTTTTACAAATTATATATATTTTTAAGTCAACCATAGCGTTAGTGTT
TTCAAAGTTAAAAAAAGCCCAAAAAGCCCGGAGGGCCGGTAGGCTTCTAG
GCTGGTGGTGACTGTCAAACATGAAGATCATTTATGAAGAGAGCATCAGG
CTTTTAAAAGCACTCTATTGTTCACTTTATATGATTGCAAATTCTTCTTT
CTCTTGCAGATTTCACTTGGACCCTTCTGGAACTTTCCTACAATACGATG
CAAAAGCTATCGGTATAACAATATTCTAATACTTTTTTCTCTGACCTTGT
AAATAACCCCTCCCCTTTAACGATGCAAAAACTATCGGTATGATAACACA
ATATTGTAATGACTTTTTCTCTGACCTTGTAAATAACCCCTTCCCTTTTA
CGATGCAAAAGCTATCGGTATGATAACACAATATTGTAATGACTTTTTCT
CTGACCTTGTAGATAACCCCTTCCCTATTACCTAGTCCGAATCGCTGACC
TCTTAGTCTACTCATTGCGAGAAATTCTTGGGAACGTCAACAGCTCCCCT
GTTCTTATGGGATATATGGAACTAGGATCTACTAGTTGGAAATAATAGGA
TCTACTACAATCGGTGACGAAATACTTGGCACAAAAAGGAAATCCACCGG
GGTGTTTTGAAACCACAATCGATTTGCAAGTGCTCTAAAGTAGGTTCAAA
GGGTAGAGTTTTAACTCTGAGTTTTAACGCTAGACTTAAGAATCTTAATT
AATCTGCGGATCCAAAAGTTCAAAAATGGTCCAGTAGGGCTTGAAATATA
GCCTAGAAACCAATAAATCCCTCCCAGATCGAAATAATCGTTGAAATCAA
GTTGAAGGCCCGAAATTGACATTCTAGCTCGAACTTCACTTTTCGAAAAA
TGGTAAATTAGCCAAAAGTGCCAATATGTTATGGCACTGATTGTAGTTAG
AAATAATATTATCATTTAGCTAGGGGAAATTCGGAACTGGAGCTACTTTT
AATGATTGTGTTGATAAGTCACAAGACAGGCTCGTTCTTCATGACCAGTA
AATCTATTCTTGATATTCATGACGTAATCACGGGTATTTGCCACCACGCT
TGTTTGTTTTTCGGGTGTATCTGTATAAAAGATTACGTCATGAATATCAA
GAATTTAACACCATTATTTTTCTTTGCACACAGGATCAGCCAGTGAAGGA
GCTCAACAAACGCTACAAGAAGTCTATCACAAGGTATACAATGCTAATAA
GCCTATAGGCAAAAACAAAACATTATGTAAATCTATGTACACTCCCATCA
TCGAACGTTAGAATGTTTTTCTTTTTTAATGAGGCTGGACTTAAAAAATT
GTTGGTTTGCCGTCACCCGACCGACCCTACCTCGAAACCTGCCGACCCCA
AAATTGCCATTTTAAAGAAGATTTTTTTTCCTTCAAAAACTTCAAACAAT
AAAAAATCAAAACTGCATCTTGTTTGTCTCAAGCATAAGAATCGGAAACT
CCCTGCTAGCACTTCTGTTTTTATTCAAAATTACCCAAATGTCAACAAAC
TGTTAACCCTTCCATGGACGAAAATTTGATAAATTGCCAAAACAAAAAAA
GATTCCGACCGCCGACCCACCTCCAAAATCTAGGGTCGGGTGACGGCAAA
CCAACAATTTTTTAAGTCCAGCCTGATTATCTTAATTACTTTGAGTCATA
AAATTTGTTCATGGAATCGACAATAGATTTATTTTAATAAATTTCTTTGA
TAAACAACAAGAGCGACAAAAAAATCAAACTTTGAAAGCAAAATTTGAAA
AAAAAATCTACGGCGGTATAATAGCCATGGTATATTAGGAATTATTCGAT
GGCTGTTTTTGCCTACAGGTCCTACAGGTATATAATAATACACAATGTCC
AAAAGGTTTCCTTATTAATTATGCGAATATTATTCATGATAAACATGACG
TAATTTTTAATATGGTAGGCTTATTAGACCATGTTCAGACGTTACGGTTT
CATATCACTTCGATGTGGTTTTTGTTAGGGATTTTGTTAGTTTTCATACT
CATTTCGGTCCGTTTCAGAGCAAGAACGTTCCGATGAAATTAGTGTAGCG
AAACCGTTTTAATCTGCTTCGCTTTGTGACGTCTTCTTTTTTGACGTTTC
CAATTTTGACGTTCACACAGTGTTTCGGAACTGTTTTGTTTCGGAGCAAA
ATGGAACGTAGCGTGTGAACGTGGTCATAACTCCAAATTTCCTTAACTCA
AACAAATTTGTGTTCTCCCGTGCGTGTTCGTGTTATCGAGACTCAAGTTT
GCAACATAATGTTCAAAAGTTTGTTTAAAGTGGTTATTATGCGAATATTA
TGTCATGAGCTCACTTGTGCGAGTCAAGACTGCGTCATATTTCGGGGCAT
ATTTTTTTTAAACAAGTTATTTAGCATCATGTTTTCCCCACAGCATGCGT
CTTTGAGCTTCACCACCACTAAAGGTCACATCAGCTAATTTTTCATGGCT
CAACCGAAAATGTAGACTTTGTGATAAATTTTCTTTCTACAGTCGATGAC
GCTGAAGGAAGCATGCAATCAAGCACTGACCATCTTAAAACAAGTCATGG
AAGAGAAATTGACCGCCACTAATATTGAGGTAACCTTTATTAGTTATTAC
CGTGAAAAATAAAGAAAAGTCGTTCCTCCTCCGCGGCACTGGCAATTTTC
ACGATATGTTTTCGTAGAGGTCAATATACATTTGTGAAATACACAACTAT
AAATGTTTGTTGCCTCCCGGCCCTATACTCTACCCAGTTTCTTGAAGAGA
CAAATCCTGGAGAAAGTTCTGCACACGATTTTTAGTCGTTGACTAAGAAA
GTGCCGAGGCTCACTTGATGAAATTTCTAACAACTAAAACAAAACCTGCA
CGATATTAAATCAAGTTCATGAAAGTAAAGTTCGTAAATGTCGTGATTTT
TCCACCTCGCGAAAGTTTCTGCTTGCGTAATATTAAGCCTAAAGTTATAA
AGCTCGCAAAAGTTTACTTTGTGCTTAAAGGAAAGGGGATAAAAAAATTG
GTCGATCGACGATTCACAAGACCCGACCCGAAAGAATCTCAAAACAATGT
GAATAGGGTTTTATTCGCTTGTTAGGATAATATAAAGATGGGTGGATTTT
ATGTTGTCATGGACACTAAAAGACGTTAAAAGCTCCTCTTCTCATTTTAC
GACTTAATGAGGTCAATTTTCTCTCTTCATAAAGATTGATCGCTCTCCTC
TTTAATCATGATTTGTAGTGTTGACAGTGAAATCTTTTGCACGCGTGTTC
TTACAGTGCACGTTTTTTATAAGAATATAAGTCTTCGATTTATTACCAAA
GTCTTTTAAGAACAAGTTAAGAACACTTCAAGGCTTTATGCACTCTAAAG
CGTGCAATCTCTTCGGAAATTCCATGGTGAAACTAAGAACATTTAATTTT
TTTAGGCTTAGAACTCAAAGGCTCGTGTTCTTACAGTGCACGGTTTTTAT
AAGAAAGAACTATATAAGAACATAAGGCTTCGATTACCAAAGTCATTTAA
GAACAAGCTAAGAACATTTTAAGGATTTATTTATGGACTCTAAAACACCC
AATTTCTTAGGAAATTTCATGGTGAAATTAAAAACATTCAGAATATTTTT
ATGCTTAGAACACAAAGGCTTCGACAGTTTTTGATGCTCTTATAAAAAAA
CGTATATCTAGATAACAAATCTTTCACGAATCACTTCGAGAAAGTTACTC
TTAGGTGCCAAAAAAATCGAAAAATTAACAAGCGTTTATTTGGCACCTAA
GAGTATCCATGTATGTACTTTTATAGAAATATGAAAGAGTCTTTAGATTC
TTTGCCGTGTCATTTCATTCGGTTACAACTTGGGGAAAACAGAGCACTGT
GGTTTACCTTTGTGAAGATAACTGTTTTTTTATAAGCAAGCATCTCTCCC
TATATCAGGCTTGCATTATGCTTAGCATTCTATTGTTCTCGAACAATAGA
GCTATTGTTTAGGTACCAATAAGTGATCCTACATATGCTTATAAACGTTA
TGATTATAAAAGAAAAAACATGCGCCTTGTTCAGCAAATTCTTTAGGGAG
ATAAACCATTTTATTTGGTTTTCCCTTGGAATGATTAAATCTTCTCATGA
CTTTAGAAATATTTGAAACATTCCTAAAGTTCCTAAAGGCAATTTAACAA
GTCTTTAGTGAATATGTTCCGCAGAACTCTGGATGTGACCTCCCCTTCGT
TGCCAGGGCCATGGTCTCCCATTAAAAACTGATCATCAATGAATGAGTCA
TTGTATGTTATAATGAGAGGGTTTGTACGTAGTGATTAGTTCCCAATAAT
TAACCGATTAAAAATTTTATGGCTAATTAGAAGTGCCTTAACTTGAGGTT
TTAACTTGACAATGAGATTATTTTCCGAACGGTATGTTGTCATAGGTTTT
GATTATTTGCCCTTGTGACCCTAACCCTTCTAAATTTTTTTCACAAAGAC
GTTAAGGTCACACACAGCCTTTTCTCAAACCTTGTTTTATATGTCATCGG
TCAAGTTTTGAGAGATTTTGATCCCTTTGGAATTTCCGTCTAAACTTTTT
TGTTTTGGTTGTAAAAATCTTTAACCCCTTCGTCTTTAAAGTTTTTATAC
ATTAGGTGGAACCCAGTTTCCCGATAACATCCTAATTCTTACTGTCCGGT
ATCTTTTTCATTTACATCCGCATACGCCCCTTTTATCTGTGGGCGTGACA
CTCCTGTTCTTTTTCTCTCGGCATGGGCCCCGTCAACGGGGGGGCCGGGG
GGTCCATGGCCCCCCCACTTTTTGGTAGACCATATCATACGTTTTTAAGA
GTTACTATCTTAAGCTGGTTTGAGACCAAATCAAACCACAANCCCCCCCC
CCCCGCTTATTAATTTTTGGGAAAATGTTTTTGAAAGTTCCCTCTTTTGT
CCTAATTCAGCTGTATTAGCCTCCTTTTCAATTTTTTTTTACCCAGGACA
TTTTTATTCCAACCCCTCTCCCCGCTTAATAAGTTTTGAGATTTTTTCCA
ACATCTCGCTTATTCCAACCCCCCCCCCCCGGCTATTAGGTACCCGAGAG
TATATGTCGTCTCAGACCCCGTGAAACACCACAAGTTTTCCAGTTTTGAA
GGATTTTGAAGCCTTATAAGTTACTGTCCTGATTATTGTTTTAATGCTCT
TCAGCCCTTTTCCTTTTTAAGGTTTTGCACAGTGTGTTTTCCTGATGACA
TCTCAATTTTTCCTATCCGGTTATTTTTTGACATCCTTAGACGCCCCTTT
GTATGTTGAAGCAGGGCGTGTCTTTTCTGCTTTTGCAACACATGAAATAT
GTTGATCACGAGAATAACATTTGATAGTGATTAAAAACCTCAAACTTCCT
TTTGTCTCTCTTTTCATTCTTTTGTTATAAGAACAAATTCTGTCTCTGTT
TTCTTTCTCTTTTTTGTAAGAACCATTCTGCTTTGTGTCTTTGTNAGAAC
AAATTCTGTCTCTGTTTTCTTTCTCTTTTTTGTAAGAACCATTCTGCTTT
GTGTCTTTGTGAATGTTTCCGAGCTCTGTCTCTGCGGTTTACAAACAATT
TCATTTCCGTATCAAAATTTACTAGCCGGAACAATGTCTTATTTGAATTA
GCTTACTTGGTTTGTTGCTGTTGTTGTTGTTCTTCACGTCGTTTTTCTTG
CAAAGTCAATATGAAAAGCAAACCTGCCACTAGTTTTTAATATCCCTTTG
TTACAAAAATAAAATAAAAACAGCAGGGAAACCGCACTACAATTTACAAA
TGTCAATACTTTTTACTCAAGACGGTTATTTTCTCCCGACCGCAGGCGAA
TTTGGTTTCTAAGGCGATAAGGGTTGATCACCTTGTGACGTCATGCACGC
AATTAGATATCTTATCTCTGTTGCTATATTTTTAACTTATGGAATGTTGG
AATGTTATCTTAGGGGATTAAAAGTCTGAGATCGAAACTTTTTATTTCCA
TCTTTTAAGAAGGCTGAATATTGAAATTGGTATTTCGTAAAAAGTTAATA
CTACAATCGTTGCCAATATATCATGGCACATTTCCGGTGGTCAAATTTAG
ATACATTGCAATAACCTCCCCCTCCCCTCCGAACAATGTTGGTGGGAAAG
AAATATTGCTTGGCCGGCCCTTAGCTCGCCCCGACAACATTGTTTGGGGG
AAGAGGGGAATGCTCTTTTTTGTGCTTTTTGCCATAGGTTTAAAACGATA
TATGTAGCTTCTTGAATCTCTTTACTGTACCTAAACCTGATATCAAAGAG
TCAGAGCTTCATATTCCTGCATATATCGTTTTCGTTTTGTAAAATAGCCG
AGCTATGGAATAGACTTTAAGGAACCCGAGATAAACGCGAGACAATATGA
TAAAAATACCTTGGACGATGAATTTCTGAAAGGAAAGTTGAATAGAATAT
GATAGAAGAAAGATCCTTCGATGACTAGTAGCGTGGTGCCAGGGGGCAGC
CCCCCCCCCCAAGCGGTCAATTTTTTGGGGCGCCGAAATACAAAGGGCGC
AAAAAGACGCCTCGGATTAATAATTTCGGTGCACTTTTGCTTTTTTGCAC
CTTAGAATTGGCAGTTTTCGGCCAAAAAGAGAGAAAATACCCTAGACTTT
TCGAGCTCGTTTCGCTCGTGTCATTTATCAAAGATATTTTCTTTTCATAT
GGGGGCGCCAAAATCGATATTTTCTAATGTAAAATTGCCTCCCCAGTTTG
CCCGAATTTCAGTCGCGGTACTGTTGATGACATGTATTCCTCAATATTTT
TTTTTGTCTTTTACTTATAGTTGGCAACGATTACAGTAGCCGATAATTTC
AAGATGTTCTCCAAAGACCAGTTGGAAGAATTGATCAAAGAGATCAACAA
GTAAACATTCCCTAGTTTATTTAATATTTGTGAGTTATTCTATGAGATAG
GGATTTTTAAGATCTGAGCTCCTATTCTTGCCTCAAAATTCGGAAGTTTC
TTATTATGATGTATTTAGGGAAATTCTTGATATTAATGACGTAATCTTTT
ATACGGAAACATCGGGTGTTTGCCACCGCAGCTTCATTGTTTAAATTCAA
AACTTGTGACAAACGTCCGGTGTTTTTCGGGTGTTTCCGTGTAAAACGTC
ATGAATTTTTTTATTCTGGAAAGTTACGTCAGTTTTATTTCGGTTGATTT
GGCTTTTAGACGAATGAAAATTCTTTTCAAAACGCCACAAAATCGAGGTT
AAACTTAAACTTGGTTTAACTTATAATGATAATTCAAAGGGAACGGAGGG
CAAGGGTTTAACCAAGTTTTATGATCAGGTATTTTCTTGTATTAGAATTT
TTAATGCCATCATTTTCATTAGCGATTTACCTGTAAAGTTTTTTTTGGAA
AGAAATATTTAATTATTTTGAAGGAAAAAGAAAATTGAAATTTAAAAAAA
TTAACAAC

Coding sequence (CDS) from alignment at sc0000137:372716..384973-

>TCONS_00012122 ID=TCONS_00012122|Name=TCONS_00012122|organism=Clytia hemisphaerica|type=CDS|length=8481bp|location=Sequence derived from alignment at sc0000137:372716..384973- (Clytia hemisphaerica)
ACGAATGAAAATTCTTTTCAAAACGCCACAAAATCGAGGTTAATTGGCAA
CGATTACAGTAGCCGATAATTTCAAGATGTTCTCCAAAGACCAGTTGGAA
GAATTGATCAAAGAGATCAACAATCGATGACGCTGAAGGAAGCATGCAAT
CAAGCACTGACCATCTTAAAACAAGTCATGGAAGAGAAATTGACCGCCAC
TAATATTGAGGATCAGCCAGTGAAGGAGCTCAACAAACGCTACAAGAAGT
CTATCACAAGATTTCACTTGGACCCTTCTGGAACTTTCCTACAATACGAT
GCAAAAGCTATCGAGTCGACCATTTGGTGTTGCGTTGCTCATCGGTGGAA
TCGATGAAAACGGTCCTCAATTAACCATTGGTTTACGTACAACGAGAAGA
TGTCCGTCGAAAGTTTGACGCAATCACTTTCAAACTTGGCATTGGCTTTC
GGTAATCGAGACTATGATAAAGGTGCAATGGATGTGCAATGAGTGGATTG
ATCGCAGATTCTCGAACCATGGTTGACAAAGCACGTGTTGAAGGCCAGCT
CGGCTCAACAGCCATTGGGATACAAACATCCGAGGGTGTTGTATTGGCTG
TGGAAAGAAGAATTACCTCACCGCTCATCATCCCTAAAAGTATCGAGAAA
ATCTTCGAAGTTGATCAACACATCGAGGTGTCAATTTGTTCTCACCAGAG
GGAAGATTATTCCAAGTAGAATATGCGATCGAAGCTATCAAGATGTTTCT
CACAAGAACTGAATACGACAGACGAATGAAAATTCTTTTCAAAACGCCAC
AAAATCGAGGTTAATTGGCAACGATTACAGTAGCCGATAATTTCAAGATG
TTCTCCAAAGACCAGTTGGAAGAATTGATCAAAGAGATCAACAATCGATG
ACGCTGAAGGAAGCATGCAATCAAGCACTGACCATCTTAAAACAAGTCAT
GGAAGAGAAATTGACCGCCACTAATATTGAGGATCAGCCAGTGAAGGAGC
TCAACAAACGCTACAAGAAGTCTATCACAAGATTTCACTTGGACCCTTCT
GGAACTTTCCTACAATACGATGCAAAAGCTATCGAGTCGACCATTTGGTG
TTGCGTTGCTCATCGGTGGAATCGATGAAAACGGTCCTCAATTAACCATT
GGTTTACGTACAACGAGAAGATGTCCGTCGAAAGTTTGACGCAATCACTT
TCAAACTTGGCATTGGCTTTCGGTAATCGAGACTATGATAAAGGTGCAAT
GGATGTGCAATGAGTGGATTGATCGCAGATTCTCGAACCATGGTTGACAA
AGCACGTGTTGAAGGCCAGCTCGGCTCAACAGCCATTGGGATACAAACAT
CCGAGGGTGTTGTATTGGCTGTGGAAAGAAGAATTACCTCACCGCTCATC
ATCCCTAAAAGTATCGAGAAAATCTTCGAAGTTGATCAACACATCGAGGT
GTCAATTTGTTCTCACCAGAGGGAAGATTATTCCAAGTAGAATATGCGAT
CGAAGCTATCAAGATGTTTCTCACAAGAACTGAATACGACAGACGAATGA
AAATTCTTTTCAAAACGCCACAAAATCGAGGTTAATTGGCAACGATTACA
GTAGCCGATAATTTCAAGATGTTCTCCAAAGACCAGTTGGAAGAATTGAT
CAAAGAGATCAACAATCGATGACGCTGAAGGAAGCATGCAATCAAGCACT
GACCATCTTAAAACAAGTCATGGAAGAGAAATTGACCGCCACTAATATTG
AGGATCAGCCAGTGAAGGAGCTCAACAAACGCTACAAGAAGTCTATCACA
AGATTTCACTTGGACCCTTCTGGAACTTTCCTACAATACGATGCAAAAGC
TATCGAGTCGACCATTTGGTGTTGCGTTGCTCATCGGTGGAATCGATGAA
AACGGTCCTCAATTAACCATTGGTTTACGTACAACGAGAAGATGTCCGTC
GAAAGTTTGACGCAATCACTTTCAAACTTGGCATTGGCTTTCGGTAATCG
AGACTATGATAAAGGTGCAATGGATGTGCAATGAGTGGATTGATCGCAGA
TTCTCGAACCATGGTTGACAAAGCACGTGTTGAAGGCCAGCTCGGCTCAA
CAGCCATTGGGATACAAACATCCGAGGGTGTTGTATTGGCTGTGGAAAGA
AGAATTACCTCACCGCTCATCATCCCTAAAAGTATCGAGAAAATCTTCGA
AGTTGATCAACACATCGAGGTGTCAATTTGTTCTCACCAGAGGGAAGATT
ATTCCAAGTAGAATATGCGATCGAAGCTATCAAGATGTTTCTCACAAGAA
CTGAATACGACAGACGAATGAAAATTCTTTTCAAAACGCCACAAAATCGA
GGTTAATTGGCAACGATTACAGTAGCCGATAATTTCAAGATGTTCTCCAA
AGACCAGTTGGAAGAATTGATCAAAGAGATCAACAATCGATGACGCTGAA
GGAAGCATGCAATCAAGCACTGACCATCTTAAAACAAGTCATGGAAGAGA
AATTGACCGCCACTAATATTGAGGATCAGCCAGTGAAGGAGCTCAACAAA
CGCTACAAGAAGTCTATCACAAGATTTCACTTGGACCCTTCTGGAACTTT
CCTACAATACGATGCAAAAGCTATCGAGTCGACCATTTGGTGTTGCGTTG
CTCATCGGTGGAATCGATGAAAACGGTCCTCAATTAACCATTGGTTTACG
TACAACGAGAAGATGTCCGTCGAAAGTTTGACGCAATCACTTTCAAACTT
GGCATTGGCTTTCGGTAATCGAGACTATGATAAAGGTGCAATGGATGTGC
AATGAGTGGATTGATCGCAGATTCTCGAACCATGGTTGACAAAGCACGTG
TTGAAGGCCAGCTCGGCTCAACAGCCATTGGGATACAAACATCCGAGGGT
GTTGTATTGGCTGTGGAAAGAAGAATTACCTCACCGCTCATCATCCCTAA
AAGTATCGAGAAAATCTTCGAAGTTGATCAACACATCGAGGTGTCAATTT
GTTCTCACCAGAGGGAAGATTATTCCAAGTAGAATATGCGATCGAAGCTA
TCAAGATGTTTCTCACAAGAACTGAATACGACAGACGAATGAAAATTCTT
TTCAAAACGCCACAAAATCGAGGTTAATTGGCAACGATTACAGTAGCCGA
TAATTTCAAGATGTTCTCCAAAGACCAGTTGGAAGAATTGATCAAAGAGA
TCAACAATCGATGACGCTGAAGGAAGCATGCAATCAAGCACTGACCATCT
TAAAACAAGTCATGGAAGAGAAATTGACCGCCACTAATATTGAGGATCAG
CCAGTGAAGGAGCTCAACAAACGCTACAAGAAGTCTATCACAAGATTTCA
CTTGGACCCTTCTGGAACTTTCCTACAATACGATGCAAAAGCTATCGAGT
CGACCATTTGGTGTTGCGTTGCTCATCGGTGGAATCGATGAAAACGGTCC
TCAATTAACCATTGGTTTACGTACAACGAGAAGATGTCCGTCGAAAGTTT
GACGCAATCACTTTCAAACTTGGCATTGGCTTTCGGTAATCGAGACTATG
ATAAAGGTGCAATGGATGTGCAATGAGTGGATTGATCGCAGATTCTCGAA
CCATGGTTGACAAAGCACGTGTTGAAGGCCAGCTCGGCTCAACAGCCATT
GGGATACAAACATCCGAGGGTGTTGTATTGGCTGTGGAAAGAAGAATTAC
CTCACCGCTCATCATCCCTAAAAGTATCGAGAAAATCTTCGAAGTTGATC
AACACATCGAGGTGTCAATTTGTTCTCACCAGAGGGAAGATTATTCCAAG
TAGAATATGCGATCGAAGCTATCAAGATGTTTCTCACAAGAACTGAATAC
GACAGACGAATGAAAATTCTTTTCAAAACGCCACAAAATCGAGGTTAATT
GGCAACGATTACAGTAGCCGATAATTTCAAGATGTTCTCCAAAGACCAGT
TGGAAGAATTGATCAAAGAGATCAACAATCGATGACGCTGAAGGAAGCAT
GCAATCAAGCACTGACCATCTTAAAACAAGTCATGGAAGAGAAATTGACC
GCCACTAATATTGAGGATCAGCCAGTGAAGGAGCTCAACAAACGCTACAA
GAAGTCTATCACAAGATTTCACTTGGACCCTTCTGGAACTTTCCTACAAT
ACGATGCAAAAGCTATCGAGTCGACCATTTGGTGTTGCGTTGCTCATCGG
TGGAATCGATGAAAACGGTCCTCAATTAACCATTGGTTTACGTACAACGA
GAAGATGTCCGTCGAAAGTTTGACGCAATCACTTTCAAACTTGGCATTGG
CTTTCGGTAATCGAGACTATGATAAAGGTGCAATGGATGTGCAATGAGTG
GATTGATCGCAGATTCTCGAACCATGGTTGACAAAGCACGTGTTGAAGGC
CAGCTCGGCTCAACAGCCATTGGGATACAAACATCCGAGGGTGTTGTATT
GGCTGTGGAAAGAAGAATTACCTCACCGCTCATCATCCCTAAAAGTATCG
AGAAAATCTTCGAAGTTGATCAACACATCGAGGTGTCAATTTGTTCTCAC
CAGAGGGAAGATTATTCCAAGTAGAATATGCGATCGAAGCTATCAAGATG
TTTCTCACAAGAACTGAATACGACAGACGAATGAAAATTCTTTTCAAAAC
GCCACAAAATCGAGGTTAATTGGCAACGATTACAGTAGCCGATAATTTCA
AGATGTTCTCCAAAGACCAGTTGGAAGAATTGATCAAAGAGATCAACAAT
CGATGACGCTGAAGGAAGCATGCAATCAAGCACTGACCATCTTAAAACAA
GTCATGGAAGAGAAATTGACCGCCACTAATATTGAGGATCAGCCAGTGAA
GGAGCTCAACAAACGCTACAAGAAGTCTATCACAAGATTTCACTTGGACC
CTTCTGGAACTTTCCTACAATACGATGCAAAAGCTATCGAGTCGACCATT
TGGTGTTGCGTTGCTCATCGGTGGAATCGATGAAAACGGTCCTCAATTAA
CCATTGGTTTACGTACAACGAGAAGATGTCCGTCGAAAGTTTGACGCAAT
CACTTTCAAACTTGGCATTGGCTTTCGGTAATCGAGACTATGATAAAGGT
GCAATGGATGTGCAATGAGTGGATTGATCGCAGATTCTCGAACCATGGTT
GACAAAGCACGTGTTGAAGGCCAGCTCGGCTCAACAGCCATTGGGATACA
AACATCCGAGGGTGTTGTATTGGCTGTGGAAAGAAGAATTACCTCACCGC
TCATCATCCCTAAAAGTATCGAGAAAATCTTCGAAGTTGATCAACACATC
GAGGTGTCAATTTGTTCTCACCAGAGGGAAGATTATTCCAAGTAGAATAT
GCGATCGAAGCTATCAAGATGTTTCTCACAAGAACTGAATACGACAGACG
AATGAAAATTCTTTTCAAAACGCCACAAAATCGAGGTTAATTGGCAACGA
TTACAGTAGCCGATAATTTCAAGATGTTCTCCAAAGACCAGTTGGAAGAA
TTGATCAAAGAGATCAACAATCGATGACGCTGAAGGAAGCATGCAATCAA
GCACTGACCATCTTAAAACAAGTCATGGAAGAGAAATTGACCGCCACTAA
TATTGAGGATCAGCCAGTGAAGGAGCTCAACAAACGCTACAAGAAGTCTA
TCACAAGATTTCACTTGGACCCTTCTGGAACTTTCCTACAATACGATGCA
AAAGCTATCGAGTCGACCATTTGGTGTTGCGTTGCTCATCGGTGGAATCG
ATGAAAACGGTCCTCAATTAACCATTGGTTTACGTACAACGAGAAGATGT
CCGTCGAAAGTTTGACGCAATCACTTTCAAACTTGGCATTGGCTTTCGGT
AATCGAGACTATGATAAAGGTGCAATGGATGTGCAATGAGTGGATTGATC
GCAGATTCTCGAACCATGGTTGACAAAGCACGTGTTGAAGGCCAGCTCGG
CTCAACAGCCATTGGGATACAAACATCCGAGGGTGTTGTATTGGCTGTGG
AAAGAAGAATTACCTCACCGCTCATCATCCCTAAAAGTATCGAGAAAATC
TTCGAAGTTGATCAACACATCGAGGTGTCAATTTGTTCTCACCAGAGGGA
AGATTATTCCAAGTAGAATATGCGATCGAAGCTATCAAGATGTTTCTCAC
AAGAACTGAATACGACAGACGAATGAAAATTCTTTTCAAAACGCCACAAA
ATCGAGGTTAATTGGCAACGATTACAGTAGCCGATAATTTCAAGATGTTC
TCCAAAGACCAGTTGGAAGAATTGATCAAAGAGATCAACAATCGATGACG
CTGAAGGAAGCATGCAATCAAGCACTGACCATCTTAAAACAAGTCATGGA
AGAGAAATTGACCGCCACTAATATTGAGGATCAGCCAGTGAAGGAGCTCA
ACAAACGCTACAAGAAGTCTATCACAAGATTTCACTTGGACCCTTCTGGA
ACTTTCCTACAATACGATGCAAAAGCTATCGAGTCGACCATTTGGTGTTG
CGTTGCTCATCGGTGGAATCGATGAAAACGGTCCTCAATTAACCATTGGT
TTACGTACAACGAGAAGATGTCCGTCGAAAGTTTGACGCAATCACTTTCA
AACTTGGCATTGGCTTTCGGTAATCGAGACTATGATAAAGGTGCAATGGA
TGTGCAATGAGTGGATTGATCGCAGATTCTCGAACCATGGTTGACAAAGC
ACGTGTTGAAGGCCAGCTCGGCTCAACAGCCATTGGGATACAAACATCCG
AGGGTGTTGTATTGGCTGTGGAAAGAAGAATTACCTCACCGCTCATCATC
CCTAAAAGTATCGAGAAAATCTTCGAAGTTGATCAACACATCGAGGTGTC
AATTTGTTCTCACCAGAGGGAAGATTATTCCAAGTAGAATATGCGATCGA
AGCTATCAAGATGTTTCTCACAAGAACTGAATACGACAGACGAATGAAAA
TTCTTTTCAAAACGCCACAAAATCGAGGTTAATTGGCAACGATTACAGTA
GCCGATAATTTCAAGATGTTCTCCAAAGACCAGTTGGAAGAATTGATCAA
AGAGATCAACAATCGATGACGCTGAAGGAAGCATGCAATCAAGCACTGAC
CATCTTAAAACAAGTCATGGAAGAGAAATTGACCGCCACTAATATTGAGG
ATCAGCCAGTGAAGGAGCTCAACAAACGCTACAAGAAGTCTATCACAAGA
TTTCACTTGGACCCTTCTGGAACTTTCCTACAATACGATGCAAAAGCTAT
CGAGTCGACCATTTGGTGTTGCGTTGCTCATCGGTGGAATCGATGAAAAC
GGTCCTCAATTAACCATTGGTTTACGTACAACGAGAAGATGTCCGTCGAA
AGTTTGACGCAATCACTTTCAAACTTGGCATTGGCTTTCGGTAATCGAGA
CTATGATAAAGGTGCAATGGATGTGCAATGAGTGGATTGATCGCAGATTC
TCGAACCATGGTTGACAAAGCACGTGTTGAAGGCCAGCTCGGCTCAACAG
CCATTGGGATACAAACATCCGAGGGTGTTGTATTGGCTGTGGAAAGAAGA
ATTACCTCACCGCTCATCATCCCTAAAAGTATCGAGAAAATCTTCGAAGT
TGATCAACACATCGAGGTGTCAATTTGTTCTCACCAGAGGGAAGATTATT
CCAAGTAGAATATGCGATCGAAGCTATCAAGATGTTTCTCACAAGAACTG
AATACGACAGACGAATGAAAATTCTTTTCAAAACGCCACAAAATCGAGGT
TAATTGGCAACGATTACAGTAGCCGATAATTTCAAGATGTTCTCCAAAGA
CCAGTTGGAAGAATTGATCAAAGAGATCAACAATCGATGACGCTGAAGGA
AGCATGCAATCAAGCACTGACCATCTTAAAACAAGTCATGGAAGAGAAAT
TGACCGCCACTAATATTGAGGATCAGCCAGTGAAGGAGCTCAACAAACGC
TACAAGAAGTCTATCACAAGATTTCACTTGGACCCTTCTGGAACTTTCCT
ACAATACGATGCAAAAGCTATCGAGTCGACCATTTGGTGTTGCGTTGCTC
ATCGGTGGAATCGATGAAAACGGTCCTCAATTAACCATTGGTTTACGTAC
AACGAGAAGATGTCCGTCGAAAGTTTGACGCAATCACTTTCAAACTTGGC
ATTGGCTTTCGGTAATCGAGACTATGATAAAGGTGCAATGGATGTGCAAT
GAGTGGATTGATCGCAGATTCTCGAACCATGGTTGACAAAGCACGTGTTG
AAGGCCAGCTCGGCTCAACAGCCATTGGGATACAAACATCCGAGGGTGTT
GTATTGGCTGTGGAAAGAAGAATTACCTCACCGCTCATCATCCCTAAAAG
TATCGAGAAAATCTTCGAAGTTGATCAACACATCGAGGTGTCAATTTGTT
CTCACCAGAGGGAAGATTATTCCAAGTAGAATATGCGATCGAAGCTATCA
AGATGTTTCTCACAAGAACTGAATACGACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006816XLOC_006816Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012122-proteinTCONS_00012122-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012122-exon-sc0000137-1575043694:384914..384973TCONS_00012122-exon-sc0000137-1575043694:384914..384973Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:382849..382915TCONS_00012122-exon-sc0000137-1575043694:382849..382915Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:382218..382344TCONS_00012122-exon-sc0000137-1575043694:382218..382344Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:381483..381550TCONS_00012122-exon-sc0000137-1575043694:381483..381550Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:380976..381083TCONS_00012122-exon-sc0000137-1575043694:380976..381083Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:380416..380474TCONS_00012122-exon-sc0000137-1575043694:380416..380474Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:379912..379964TCONS_00012122-exon-sc0000137-1575043694:379912..379964Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:378941..378990TCONS_00012122-exon-sc0000137-1575043694:378941..378990Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:377545..377631TCONS_00012122-exon-sc0000137-1575043694:377545..377631Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:373274..373353TCONS_00012122-exon-sc0000137-1575043694:373274..373353Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1575043694:372716..372964TCONS_00012122-exon-sc0000137-1575043694:372716..372964Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:384914..384973TCONS_00012122-exon-sc0000137-1510915933:384914..384973Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:382849..382915TCONS_00012122-exon-sc0000137-1510915933:382849..382915Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:382218..382344TCONS_00012122-exon-sc0000137-1510915933:382218..382344Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:381483..381550TCONS_00012122-exon-sc0000137-1510915933:381483..381550Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:380976..381083TCONS_00012122-exon-sc0000137-1510915933:380976..381083Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:380416..380474TCONS_00012122-exon-sc0000137-1510915933:380416..380474Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:379912..379964TCONS_00012122-exon-sc0000137-1510915933:379912..379964Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:378941..378990TCONS_00012122-exon-sc0000137-1510915933:378941..378990Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:377545..377631TCONS_00012122-exon-sc0000137-1510915933:377545..377631Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:373274..373353TCONS_00012122-exon-sc0000137-1510915933:373274..373353Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1510915933:372716..372964TCONS_00012122-exon-sc0000137-1510915933:372716..372964Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:384914..384973TCONS_00012122-exon-sc0000137-1491911889:384914..384973Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:382849..382915TCONS_00012122-exon-sc0000137-1491911889:382849..382915Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:382218..382344TCONS_00012122-exon-sc0000137-1491911889:382218..382344Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:381483..381550TCONS_00012122-exon-sc0000137-1491911889:381483..381550Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:380976..381083TCONS_00012122-exon-sc0000137-1491911889:380976..381083Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:380416..380474TCONS_00012122-exon-sc0000137-1491911889:380416..380474Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:379912..379964TCONS_00012122-exon-sc0000137-1491911889:379912..379964Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:378941..378990TCONS_00012122-exon-sc0000137-1491911889:378941..378990Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:377545..377631TCONS_00012122-exon-sc0000137-1491911889:377545..377631Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:373274..373353TCONS_00012122-exon-sc0000137-1491911889:373274..373353Clytia hemisphaericaexon
TCONS_00012122-exon-sc0000137-1491911889:372716..372964TCONS_00012122-exon-sc0000137-1491911889:372716..372964Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:372716..384973 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
161.071	169.95	127.306	113.985	19.754	24.2039	28.7898	24.3874	122.086	112.515	107.626	115.501	84.2822	86.5752	129.731	136.45	183.516	162.538	45.8542	59.0717	89.8754	96.6466	100.091	90.0229	57.6419	23.9695	92.2543	65.0678	68.3998	58.0868
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000426Proteasome_asu_N
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR023332Proteasome_alpha-type
IPR033812Proteasome_alpha_type_5
Vocabulary: Cellular Component
TermDefinition
GO:0019773proteasome core complex, alpha-subunit complex
GO:0005839proteasome core complex
Vocabulary: Molecular Function
TermDefinition
GO:0004175endopeptidase activity
GO:0004298threonine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0019773 proteasome core complex, alpha-subunit complex
molecular_function GO:0004175 endopeptidase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
Blast
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BLAST of TCONS_00012122 vs. Swiss-Prot (Human)
Match: PSA5 (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3)

HSP 1 Score: 404.445 bits (1038), Expect = 1.567e-141
Identity = 190/241 (78.84%), Postives = 214/241 (88.80%), Query Frame = 2 
Query:   32 MFLTRTEYDRGVNLFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVERRITSPLIIPKSIEKIFEVDQHIGCAMSGLIADSRTMVDKARVEGQNHWFTYNEKMSVESLTQSLSNLALAFGNRDYDKGAMSRPFGVALLIGGIDENGPQLFHLDPSGTFLQYDAKAIGSASEGAQQTLQEVYHKSMTLKEACNQALTILKQVMEEKLTATNIELATITVADNFKMFSKDQLEELIKEI 754
            MFLTR+EYDRGVN FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGV LAVE+RITSPL+ P SIEKI E+D HIGCAMSGLIAD++T++DKARVE QNHWFTYNE M+VES+TQ++SNLAL FG  D D GAMSRPFGVALL GG+DE GPQLFH+DPSGTF+Q DA+AIGSASEGAQ +LQEVYHKSMTLKEA   +L ILKQVMEEKL ATNIELAT+    NF MF+K++LEE+IK+I
Sbjct:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241
The following BLAST results are available for this feature:
BLAST of TCONS_00012122 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSA51.567e-14178.84Proteasome subunit alpha type-5 OS=Homo sapiens GN... [more]
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