TCONS_00012123 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012123
Unique NameTCONS_00012123
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1319

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012123 ID=TCONS_00012123|Name=TCONS_00012123|organism=Clytia hemisphaerica|type=transcript|length=1319bp
TTGTTTTTTTAGTGATAATTAATTAAAACAAGGATGTTTCTCACAAGAAC
TGAATACGACAGAGGTGTCAATTTGTTCTCACCAGAGGGAAGATTATTCC
AAGTAGAATATGCGATCGAAGCTATCAAGctcGGCTCAACAGCCATTGGG
ATACAAACATCCGAGGGTGTTGTATTGGCTGTGGAAAGAAGAATTACCTC
ACCGCTCATCATCCCTAAAAGTATCGAGAAAATCTTCGAAGTTGATCAAC
ACATCGGATGTGCAATGAGTGGATTGATCGCAGATTCTCGAACCATGGTT
GACAAAGCACGTGTTGAAGGCCAGAACCATTGGTTTACGTACAACGAGAA
GATGTCCGTCGAAAGTTTGACGCAATCACTTTCAAACTTGGCATTGGCTT
TCGGTAATCGAGACTATGATAAAGGTGCAATGaGTCGACCATTTGGTGTT
GCGTTGCTCATCGGTGGAATCGATGAAAACGGTCCTCAATTATTTCACTT
GGACCCTTCTGGAACTTTCCTACAATACGATGCAAAAGCTATCGGATCAG
CCAGTGAAGGAGCTCAACAAACGCTACAAGAAGTCTATCACAAGTCGATG
ACGCTGAAGGAAGCATGCAATCAAGCACTGACCATCTTAAAACAAGTCAT
GGAAGAGAAATTGACCGCCACTAATATTGAGTTGGCAACGATTACAGTAG
CCGATAATTTCAAGATGTTCTCCAAAGACCAGTTGGAAGAATTGATCAAA
GAGATCAACAAGTAAACATTCCCTAGTTTATTTAATATTTGTGAGTTATT
CTATGAGATAGGGATTTTTAAGATCTGAGCTCCTATTCTTGCCTCAAAAT
TCGGAAGTTTCTTATTATGATGTATTTAGGGAAATTCTTGATattaatga
cgtaatcttttatacggaaacatcGGGTGTTTGCCACCGCAGCttcattg
tttaaattcaaaacttgTGACAAACGTCCGgtgtttttcgggtgtttccg
tgtAAAAcgtcatgaatttttttattctgGAAAGTTACGTCAGTTTTATT
TCGGTTGATTTGGCTTTTAGACGaatgaaaattcttttcaaaacgcCACA
AAATCGAGGTTAAACTTAAACTTGGTTTAACTTATAATGATAATTCAAAG
GGAACGGAGGGCAAGGGTTTAACCAAGTTTTATGATCAGGTATTTTCTTG
TATTAGAATTTTTAATGCCATCATTTTCATTAGCGATTTAcctgtaaagt
tttttttggaaagaaatatttaattattttgaaggaaaaagaaaattgaa
atttaaaaaaattaacaac
Run BLAST on NCBI

transcript from alignment at sc0000137:372716..384975-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012123 ID=TCONS_00012123|Name=TCONS_00012123|organism=Clytia hemisphaerica|type=transcript|length=12260bp|location=Sequence derived from alignment at sc0000137:372716..384975- (Clytia hemisphaerica)
TTGTTTTTTTAGTGATAATTAATTAAAACAAGGATGTTTCTCACAAGAAC
TGAATACGACAGGTAAAATTATTTTGCTATTTACTCTAGTTTATTTAAAG
CTATAAAGCTAAGCTTTTTTTAAACTAAGTCGCTATTATTTGCTTACTCA
TCAATTTTAAATTTCATGCTTTTCCACATTAGATTGCAATGGATGTAGAT
AAATTGGTTAGAAAAACATTTTTTGTAATTGAACACAATATAACAATAGC
AAGACACCGCACTGATATAAAACATGTGTCTGATATGAAACAGGAACACT
CATGTAACAATAAAACCTTTAATTTTAGATAGAATATTTTTTTGTATGTC
AAATCCATAAAGGTTTGTATAATTGAAAATTATTTAGAATATTCTTGGAA
AATCTTTCTCACAATGTTTTTCCAGGAGGATGACTTTTTAGATTTCTGAG
AGTGATCGCACACTCTAAAGTGATATTAATATCAAGTTATAACTTTTGGT
TCTTCACTTTTTAAGGGTTAGAGTAAAAGGTATTATAACAGGGGGGATAC
AGTCGAAGGGTACTACTAACCCTGATTTTCAGGAAAATTTGTTTTAGGTT
CCACCACCCCCTCATAGCTTCAGCCCCCCTTACTTTGGGGGGGGGGCTAA
GAAATATTTTGGCCTTTAAAGAGCCCGGGGGCTAAAATTACCAAAATATT
TGGGGGGACCTAGATTGTTGGGGGGGGGGGTTAAGAAATATTTTGGCCTT
TAAAGAGCCCGGGGGCTAAAATTACCAAAATATTTGGGGGGCCCTAGATT
GTTGGGGGGGGGGGTTAAGAAATATTTTGGCCTTTAAAGAGCCCGGGGGC
TAAAATTACCAAAATATTTGGGGGGCCCTAGATTGTTGGGGGGGGGGGTT
AAGAAATATTTTGGCCTTTAAAGAGCCCGGGGGCTAAAATTACCAAAATA
TTTGGGGGGCCCTAGATTGTTGGGGGGGGGGGTTAAGAAATATTTTGGCC
TTTAAAGAGCCCGGGGGCTAAAATTACCAAAATATTTGGGGGGCCCTAGA
TTGTTGGGGGGGGGGGTTAAGAAATATTTTGGCCTTTAAAGAGCCCGGGG
GCTAAAATTACCAAAATATTTGGGGGGCCCTAGATTGTTGGGGGGGGGGG
CTAGAGGATCTGACTGAGACTCTGGGGGCTGTTCAGCTAATTTCAAAAGA
TCTCTTATCTTACTATTAAATCAAATATAAAAAGTAAAAGATTTGTAAAC
ATAAATATTAATACAAGTAAAATTGAGTTTTCATTTATCAGTACTCTGTA
CTCGCATATATTTTTTATTGACTTCTCTACGGGGGCGGGAGAACAATGTT
TTTGTTTTTTCCCCAAGTGTTAGGGTACCTAGCGCAAGGCAATTTTTTGG
GGGAGCTAAATTGTTGGGGGGACCTTACTTTGTTGGGGGAGCTAGAAACC
TGGCTGAAGCTATGTCCCTTTTAGCTTTTAGTACCTGGTAAAAAAAGGGA
CCCACGCCTTATTTTAGAAGCTTGTTACCAAGGAAAATATAGATTGGCAA
AATTTCCATTCCGTTTTGACAAAATATCCACTTTACCCACCAAATACCAT
AATTCAGTACCAGATATTAGTTATTAGCTTGAAATGAGTGAAATAAATTG
TGTAGTACTGGGTAATAACTTTTTGAGATAAAAAACTAGACATCGCCACC
CGGCCACGAGTCAGTATCCTGCAGCTGTACACCCCCTGCTTATAAAACAC
TCTTTATTAAAAATTAATCAATATGCATTTCAGTAATTAGTTTTTACAAA
ACAAGGAATGGGGTATAATGAGATATTACAAAAGGATTTGACCGGACCAG
ACCAGTACGCTGTTTTCAGTTTGAAGAAGAAAATATCATCTTATATGTAA
TATAATGCATATAAAAGAGAACTTTTGAGTCAGATTTCTAAGAATCCTGT
TCTTCCTCGCTGGTCACAATTATTACCTATCAAACAAACTTTCTTTGAAC
TTTCAGATAATTTCTTTACACCAAGCTACCTGTTTATTTTGTTTCGTTTT
CACATTGTAGAGGTGTCAATTTGTTCTCACCAGAGGGAAGATTATTCCAA
GTAGAATATGCGATCGAAGCTATCAAGGTATGTATCTTGTCACATACCTG
TTATAAAATCTTCATTCTATTATCTGTACATATACAGCAACTCTTGAACC
TCTACACTAAACAGGCAAGCTTTCTGATAACAAGCCCTTATAAACAACTC
CCAAATTTCCCATTGCATCAAATTTTAGTTCCCCGTACCTGTTCAATTTA
TGTATCATACGTCTCCATTAGGTCTAACTTTTCAACAAATAGTTGCCATT
AACCTTTTTTATCTGAATTATTCAGTTACTACAGTTTGTAGCTTACTACC
TTATCGGCCCTTTTTACGCAGGCCCCTTTTATGCAGGCCCTTATTCCGCC
AAAGCCTAATTTTGGGCTTGCGTCAATTAGGCGTAAATAACACAAAAACT
TGTAAAAATCGTTATTCAGGCTTCAAAACAGTCAGTATTAACTAAAATTT
ACATTATAATGTCATCTTTCATCTTGCCACAAAGGATGGGCGTAAAAAGG
GCGGATAAGGTATATTAAATCTCATTTTCAGCTCGGCTCAACAGCCATTG
GGATACAAACATCCGAGGGTGTTGTATTGGCTGTGGAAAGAAGAATTACC
TCACCGCTCATCATCCCTAAAAGTATCGAGAAAATCTTCGAAGTTGATCA
ACACATCGGTGAGGATTTGTTTTCTCGTTACCGCTCACACAAACAGAAAC
CAATTTTAACAGCGTTCAGACCAGAGTACCTAATTCAGGACCTACTAGAG
ACCATCTTACTATCTCTAATTCAATGATCTTCGAGGGACCCAAAATTGTC
TTCGAATTATAGCAAGATTCTAATTACAGAGAATAATTTACACCATTATC
CAACTGAGGGGACAAATATTATAGTTCGAATTACAGAAAGTCTCAAATAA
TAGAGGTTCGAATTAGAGAGAGTTGACTGTACTAAATCTTGCAGATGGTT
TAGGATGGACTAGGGTGGAAACCTTTGGTATTATTCCTTTAAAGGGACAT
AAAAGTACTGACGAAATTTGTAAACAAACCGTATGCAGTGGGATACAAAA
TCAAAACAAATATGGCCGATTTTGATTGTTTCAATTGTTTTACAAGTTTG
TTTTGGACACGTGATTTTAATTGTTCTCTTTGGTGACACGTGGTTCGCGC
AATGTTTACATTTTACTACTTTTATGTCCCTTTAAAGTAAAGACCTTGGA
AAGACCTTTCCAAAGATCCTAGCATTCCTAGCTGGTACACAACGTTGTTT
CAACGTTCATCTAACGTTATATGGACGTTGTGAACGTTAGATGAACGTTG
AAAACATTTCTCCATTATTCATTAGGATGTGCAATGAGTGGATTGATCGC
AGATTCTCGAACCATGGTTGACAAAGCACGTGTTGAAGGCCAGGTCAGTT
CACTTTTGAGTCCATTTTAAAGATTTTTCTTTGAGCAAGATTAACATACC
TAATTTTTACGACAGTCCCTCTATCTTTCTTAAATTGGAAAAGTTTTAAA
TCGAGATTAGTCACAGTTGATGAAAGTATTAAAGTTAGTAACTTTTATCG
AGTTATTATTCGAGTCTTCCTCACAAATTTTAACAGAATTTCTTTTTCGC
CAGTCACTATTCCCCTCTAACCTCTATCTCTCTAACTTGGGATTTGGGAT
TTCAGGCATTTAGCATTTTGAGGGGAAAGTAAAAGTGAGCAAGTAAAAGC
AACCCTTTTCAAGGTTTTTAGGGCTCACTTTTTGCAAATTTGACCTAATA
ATTATAATCCTTTAAAATTGTCGATTTAATTTTCTTCCATAGAACCATTG
GTTTACGTACAACGAGAAGATGTCCGTCGAAAGTTTGACGCAATCACTTT
CAAACTTGGCATTGGCTTTCGGTAATCGAGACTATGATAAAGGTGCAATG
GTATGTTGTTCAATTTTATCGGGTTAAATATACATTCTCTTTAAAATTAA
CCTTTTGTATGACGTACAAGACCTACATGAGGAATTCTAATATTGAAGCA
AGGATTGATTCGATTCTAGTATTGATCAGAACTTGATTTTTCCCGAGAAA
ATAATGTTGTCTCTCTCCTGTAGTTGATTTCCTTCTTAACCCTATTTATC
TCAGGCTTTTTTGAATGCAGTATACGAAGGATTAGAGGCTGGAATCTACC
AGGTGTCGAAAACCTATGACCTAGATGTGCTGTGATCATGAAACTTTCAA
GAAATGTTCCTTGCCATAAAAAGGAAACCCATAGAAAAAAATTACAGTTG
ATGATGTTCCTCATATAGGTGGTAACGTCATCACAAAGTTATCACCTGTC
GTCATAAGTTGGTCGATTCGCCTCAATATCAACACCTTAATGCCTCAACG
CCTCCATGCTCAACGCCATCAAACCAATCAGTTTGTTTTTATTTCTTTCA
GAGTCGACCATTTGGTGTTGCGTTGCTCATCGGTGGAATCGATGAAAACG
GTCCTCAATTGTAAGTTGTTTGTTGTTTGTTGTTGTTAGTTGGAGTTGAC
TCTTTATTACGATCTACAAGCGATCAATAATTTTCTTCGAATGATAGAAA
GATTTGGATCACAGAGAGACTATCATACACGACTTTCCAGGTTGAGGGGA
CTAATCTTTTAGTTACAGAAAGATTCAAATTTAAAGCCTAATTGTTTTTC
TGATCAGGGTATTTTCTTTGCACTTTGGAAGGAAAATTTGTCAAAAACCC
TGTATTTTTTACAAATTATATATATTTTTAAGTCAACCATAGCGTTAGTG
TTTTCAAAGTTAAAAAAAGCCCAAAAAGCCCGGAGGGCCGGTAGGCTTCT
AGGCTGGTGGTGACTGTCAAACATGAAGATCATTTATGAAGAGAGCATCA
GGCTTTTAAAAGCACTCTATTGTTCACTTTATATGATTGCAAATTCTTCT
TTCTCTTGCAGATTTCACTTGGACCCTTCTGGAACTTTCCTACAATACGA
TGCAAAAGCTATCGGTATAACAATATTCTAATACTTTTTTCTCTGACCTT
GTAAATAACCCCTCCCCTTTAACGATGCAAAAACTATCGGTATGATAACA
CAATATTGTAATGACTTTTTCTCTGACCTTGTAAATAACCCCTTCCCTTT
TACGATGCAAAAGCTATCGGTATGATAACACAATATTGTAATGACTTTTT
CTCTGACCTTGTAGATAACCCCTTCCCTATTACCTAGTCCGAATCGCTGA
CCTCTTAGTCTACTCATTGCGAGAAATTCTTGGGAACGTCAACAGCTCCC
CTGTTCTTATGGGATATATGGAACTAGGATCTACTAGTTGGAAATAATAG
GATCTACTACAATCGGTGACGAAATACTTGGCACAAAAAGGAAATCCACC
GGGGTGTTTTGAAACCACAATCGATTTGCAAGTGCTCTAAAGTAGGTTCA
AAGGGTAGAGTTTTAACTCTGAGTTTTAACGCTAGACTTAAGAATCTTAA
TTAATCTGCGGATCCAAAAGTTCAAAAATGGTCCAGTAGGGCTTGAAATA
TAGCCTAGAAACCAATAAATCCCTCCCAGATCGAAATAATCGTTGAAATC
AAGTTGAAGGCCCGAAATTGACATTCTAGCTCGAACTTCACTTTTCGAAA
AATGGTAAATTAGCCAAAAGTGCCAATATGTTATGGCACTGATTGTAGTT
AGAAATAATATTATCATTTAGCTAGGGGAAATTCGGAACTGGAGCTACTT
TTAATGATTGTGTTGATAAGTCACAAGACAGGCTCGTTCTTCATGACCAG
TAAATCTATTCTTGATATTCATGACGTAATCACGGGTATTTGCCACCACG
CTTGTTTGTTTTTCGGGTGTATCTGTATAAAAGATTACGTCATGAATATC
AAGAATTTAACACCATTATTTTTCTTTGCACACAGGATCAGCCAGTGAAG
GAGCTCAACAAACGCTACAAGAAGTCTATCACAAGGTATACAATGCTAAT
AAGCCTATAGGCAAAAACAAAACATTATGTAAATCTATGTACACTCCCAT
CATCGAACGTTAGAATGTTTTTCTTTTTTAATGAGGCTGGACTTAAAAAA
TTGTTGGTTTGCCGTCACCCGACCGACCCTACCTCGAAACCTGCCGACCC
CAAAATTGCCATTTTAAAGAAGATTTTTTTTCCTTCAAAAACTTCAAACA
ATAAAAAATCAAAACTGCATCTTGTTTGTCTCAAGCATAAGAATCGGAAA
CTCCCTGCTAGCACTTCTGTTTTTATTCAAAATTACCCAAATGTCAACAA
ACTGTTAACCCTTCCATGGACGAAAATTTGATAAATTGCCAAAACAAAAA
AAGATTCCGACCGCCGACCCACCTCCAAAATCTAGGGTCGGGTGACGGCA
AACCAACAATTTTTTAAGTCCAGCCTGATTATCTTAATTACTTTGAGTCA
TAAAATTTGTTCATGGAATCGACAATAGATTTATTTTAATAAATTTCTTT
GATAAACAACAAGAGCGACAAAAAAATCAAACTTTGAAAGCAAAATTTGA
AAAAAAAATCTACGGCGGTATAATAGCCATGGTATATTAGGAATTATTCG
ATGGCTGTTTTTGCCTACAGGTCCTACAGGTATATAATAATACACAATGT
CCAAAAGGTTTCCTTATTAATTATGCGAATATTATTCATGATAAACATGA
CGTAATTTTTAATATGGTAGGCTTATTAGACCATGTTCAGACGTTACGGT
TTCATATCACTTCGATGTGGTTTTTGTTAGGGATTTTGTTAGTTTTCATA
CTCATTTCGGTCCGTTTCAGAGCAAGAACGTTCCGATGAAATTAGTGTAG
CGAAACCGTTTTAATCTGCTTCGCTTTGTGACGTCTTCTTTTTTGACGTT
TCCAATTTTGACGTTCACACAGTGTTTCGGAACTGTTTTGTTTCGGAGCA
AAATGGAACGTAGCGTGTGAACGTGGTCATAACTCCAAATTTCCTTAACT
CAAACAAATTTGTGTTCTCCCGTGCGTGTTCGTGTTATCGAGACTCAAGT
TTGCAACATAATGTTCAAAAGTTTGTTTAAAGTGGTTATTATGCGAATAT
TATGTCATGAGCTCACTTGTGCGAGTCAAGACTGCGTCATATTTCGGGGC
ATATTTTTTTTAAACAAGTTATTTAGCATCATGTTTTCCCCACAGCATGC
GTCTTTGAGCTTCACCACCACTAAAGGTCACATCAGCTAATTTTTCATGG
CTCAACCGAAAATGTAGACTTTGTGATAAATTTTCTTTCTACAGTCGATG
ACGCTGAAGGAAGCATGCAATCAAGCACTGACCATCTTAAAACAAGTCAT
GGAAGAGAAATTGACCGCCACTAATATTGAGGTAACCTTTATTAGTTATT
ACCGTGAAAAATAAAGAAAAGTCGTTCCTCCTCCGCGGCACTGGCAATTT
TCACGATATGTTTTCGTAGAGGTCAATATACATTTGTGAAATACACAACT
ATAAATGTTTGTTGCCTCCCGGCCCTATACTCTACCCAGTTTCTTGAAGA
GACAAATCCTGGAGAAAGTTCTGCACACGATTTTTAGTCGTTGACTAAGA
AAGTGCCGAGGCTCACTTGATGAAATTTCTAACAACTAAAACAAAACCTG
CACGATATTAAATCAAGTTCATGAAAGTAAAGTTCGTAAATGTCGTGATT
TTTCCACCTCGCGAAAGTTTCTGCTTGCGTAATATTAAGCCTAAAGTTAT
AAAGCTCGCAAAAGTTTACTTTGTGCTTAAAGGAAAGGGGATAAAAAAAT
TGGTCGATCGACGATTCACAAGACCCGACCCGAAAGAATCTCAAAACAAT
GTGAATAGGGTTTTATTCGCTTGTTAGGATAATATAAAGATGGGTGGATT
TTATGTTGTCATGGACACTAAAAGACGTTAAAAGCTCCTCTTCTCATTTT
ACGACTTAATGAGGTCAATTTTCTCTCTTCATAAAGATTGATCGCTCTCC
TCTTTAATCATGATTTGTAGTGTTGACAGTGAAATCTTTTGCACGCGTGT
TCTTACAGTGCACGTTTTTTATAAGAATATAAGTCTTCGATTTATTACCA
AAGTCTTTTAAGAACAAGTTAAGAACACTTCAAGGCTTTATGCACTCTAA
AGCGTGCAATCTCTTCGGAAATTCCATGGTGAAACTAAGAACATTTAATT
TTTTTAGGCTTAGAACTCAAAGGCTCGTGTTCTTACAGTGCACGGTTTTT
ATAAGAAAGAACTATATAAGAACATAAGGCTTCGATTACCAAAGTCATTT
AAGAACAAGCTAAGAACATTTTAAGGATTTATTTATGGACTCTAAAACAC
CCAATTTCTTAGGAAATTTCATGGTGAAATTAAAAACATTCAGAATATTT
TTATGCTTAGAACACAAAGGCTTCGACAGTTTTTGATGCTCTTATAAAAA
AACGTATATCTAGATAACAAATCTTTCACGAATCACTTCGAGAAAGTTAC
TCTTAGGTGCCAAAAAAATCGAAAAATTAACAAGCGTTTATTTGGCACCT
AAGAGTATCCATGTATGTACTTTTATAGAAATATGAAAGAGTCTTTAGAT
TCTTTGCCGTGTCATTTCATTCGGTTACAACTTGGGGAAAACAGAGCACT
GTGGTTTACCTTTGTGAAGATAACTGTTTTTTTATAAGCAAGCATCTCTC
CCTATATCAGGCTTGCATTATGCTTAGCATTCTATTGTTCTCGAACAATA
GAGCTATTGTTTAGGTACCAATAAGTGATCCTACATATGCTTATAAACGT
TATGATTATAAAAGAAAAAACATGCGCCTTGTTCAGCAAATTCTTTAGGG
AGATAAACCATTTTATTTGGTTTTCCCTTGGAATGATTAAATCTTCTCAT
GACTTTAGAAATATTTGAAACATTCCTAAAGTTCCTAAAGGCAATTTAAC
AAGTCTTTAGTGAATATGTTCCGCAGAACTCTGGATGTGACCTCCCCTTC
GTTGCCAGGGCCATGGTCTCCCATTAAAAACTGATCATCAATGAATGAGT
CATTGTATGTTATAATGAGAGGGTTTGTACGTAGTGATTAGTTCCCAATA
ATTAACCGATTAAAAATTTTATGGCTAATTAGAAGTGCCTTAACTTGAGG
TTTTAACTTGACAATGAGATTATTTTCCGAACGGTATGTTGTCATAGGTT
TTGATTATTTGCCCTTGTGACCCTAACCCTTCTAAATTTTTTTCACAAAG
ACGTTAAGGTCACACACAGCCTTTTCTCAAACCTTGTTTTATATGTCATC
GGTCAAGTTTTGAGAGATTTTGATCCCTTTGGAATTTCCGTCTAAACTTT
TTTGTTTTGGTTGTAAAAATCTTTAACCCCTTCGTCTTTAAAGTTTTTAT
ACATTAGGTGGAACCCAGTTTCCCGATAACATCCTAATTCTTACTGTCCG
GTATCTTTTTCATTTACATCCGCATACGCCCCTTTTATCTGTGGGCGTGA
CACTCCTGTTCTTTTTCTCTCGGCATGGGCCCCGTCAACGGGGGGGCCGG
GGGGTCCATGGCCCCCCCACTTTTTGGTAGACCATATCATACGTTTTTAA
GAGTTACTATCTTAAGCTGGTTTGAGACCAAATCAAACCACAANCCCCCC
CCCCCCGCTTATTAATTTTTGGGAAAATGTTTTTGAAAGTTCCCTCTTTT
GTCCTAATTCAGCTGTATTAGCCTCCTTTTCAATTTTTTTTTACCCAGGA
CATTTTTATTCCAACCCCTCTCCCCGCTTAATAAGTTTTGAGATTTTTTC
CAACATCTCGCTTATTCCAACCCCCCCCCCCCGGCTATTAGGTACCCGAG
AGTATATGTCGTCTCAGACCCCGTGAAACACCACAAGTTTTCCAGTTTTG
AAGGATTTTGAAGCCTTATAAGTTACTGTCCTGATTATTGTTTTAATGCT
CTTCAGCCCTTTTCCTTTTTAAGGTTTTGCACAGTGTGTTTTCCTGATGA
CATCTCAATTTTTCCTATCCGGTTATTTTTTGACATCCTTAGACGCCCCT
TTGTATGTTGAAGCAGGGCGTGTCTTTTCTGCTTTTGCAACACATGAAAT
ATGTTGATCACGAGAATAACATTTGATAGTGATTAAAAACCTCAAACTTC
CTTTTGTCTCTCTTTTCATTCTTTTGTTATAAGAACAAATTCTGTCTCTG
TTTTCTTTCTCTTTTTTGTAAGAACCATTCTGCTTTGTGTCTTTGTNAGA
ACAAATTCTGTCTCTGTTTTCTTTCTCTTTTTTGTAAGAACCATTCTGCT
TTGTGTCTTTGTGAATGTTTCCGAGCTCTGTCTCTGCGGTTTACAAACAA
TTTCATTTCCGTATCAAAATTTACTAGCCGGAACAATGTCTTATTTGAAT
TAGCTTACTTGGTTTGTTGCTGTTGTTGTTGTTCTTCACGTCGTTTTTCT
TGCAAAGTCAATATGAAAAGCAAACCTGCCACTAGTTTTTAATATCCCTT
TGTTACAAAAATAAAATAAAAACAGCAGGGAAACCGCACTACAATTTACA
AATGTCAATACTTTTTACTCAAGACGGTTATTTTCTCCCGACCGCAGGCG
AATTTGGTTTCTAAGGCGATAAGGGTTGATCACCTTGTGACGTCATGCAC
GCAATTAGATATCTTATCTCTGTTGCTATATTTTTAACTTATGGAATGTT
GGAATGTTATCTTAGGGGATTAAAAGTCTGAGATCGAAACTTTTTATTTC
CATCTTTTAAGAAGGCTGAATATTGAAATTGGTATTTCGTAAAAAGTTAA
TACTACAATCGTTGCCAATATATCATGGCACATTTCCGGTGGTCAAATTT
AGATACATTGCAATAACCTCCCCCTCCCCTCCGAACAATGTTGGTGGGAA
AGAAATATTGCTTGGCCGGCCCTTAGCTCGCCCCGACAACATTGTTTGGG
GGAAGAGGGGAATGCTCTTTTTTGTGCTTTTTGCCATAGGTTTAAAACGA
TATATGTAGCTTCTTGAATCTCTTTACTGTACCTAAACCTGATATCAAAG
AGTCAGAGCTTCATATTCCTGCATATATCGTTTTCGTTTTGTAAAATAGC
CGAGCTATGGAATAGACTTTAAGGAACCCGAGATAAACGCGAGACAATAT
GATAAAAATACCTTGGACGATGAATTTCTGAAAGGAAAGTTGAATAGAAT
ATGATAGAAGAAAGATCCTTCGATGACTAGTAGCGTGGTGCCAGGGGGCA
GCCCCCCCCCCCAAGCGGTCAATTTTTTGGGGCGCCGAAATACAAAGGGC
GCAAAAAGACGCCTCGGATTAATAATTTCGGTGCACTTTTGCTTTTTTGC
ACCTTAGAATTGGCAGTTTTCGGCCAAAAAGAGAGAAAATACCCTAGACT
TTTCGAGCTCGTTTCGCTCGTGTCATTTATCAAAGATATTTTCTTTTCAT
ATGGGGGCGCCAAAATCGATATTTTCTAATGTAAAATTGCCTCCCCAGTT
TGCCCGAATTTCAGTCGCGGTACTGTTGATGACATGTATTCCTCAATATT
TTTTTTTGTCTTTTACTTATAGTTGGCAACGATTACAGTAGCCGATAATT
TCAAGATGTTCTCCAAAGACCAGTTGGAAGAATTGATCAAAGAGATCAAC
AAGTAAACATTCCCTAGTTTATTTAATATTTGTGAGTTATTCTATGAGAT
AGGGATTTTTAAGATCTGAGCTCCTATTCTTGCCTCAAAATTCGGAAGTT
TCTTATTATGATGTATTTAGGGAAATTCTTGATATTAATGACGTAATCTT
TTATACGGAAACATCGGGTGTTTGCCACCGCAGCTTCATTGTTTAAATTC
AAAACTTGTGACAAACGTCCGGTGTTTTTCGGGTGTTTCCGTGTAAAACG
TCATGAATTTTTTTATTCTGGAAAGTTACGTCAGTTTTATTTCGGTTGAT
TTGGCTTTTAGACGAATGAAAATTCTTTTCAAAACGCCACAAAATCGAGG
TTAAACTTAAACTTGGTTTAACTTATAATGATAATTCAAAGGGAACGGAG
GGCAAGGGTTTAACCAAGTTTTATGATCAGGTATTTTCTTGTATTAGAAT
TTTTAATGCCATCATTTTCATTAGCGATTTACCTGTAAAGTTTTTTTTGG
AAAGAAATATTTAATTATTTTGAAGGAAAAAGAAAATTGAAATTTAAAAA
AATTAACAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006816XLOC_006816Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012123-exon-sc0000137-1575043694:384914..384975TCONS_00012123-exon-sc0000137-1575043694:384914..384975Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1575043694:382849..382915TCONS_00012123-exon-sc0000137-1575043694:382849..382915Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1575043694:382218..382344TCONS_00012123-exon-sc0000137-1575043694:382218..382344Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1575043694:381483..381550TCONS_00012123-exon-sc0000137-1575043694:381483..381550Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1575043694:380976..381083TCONS_00012123-exon-sc0000137-1575043694:380976..381083Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1575043694:380416..380474TCONS_00012123-exon-sc0000137-1575043694:380416..380474Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1575043694:379912..379964TCONS_00012123-exon-sc0000137-1575043694:379912..379964Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1575043694:378941..378990TCONS_00012123-exon-sc0000137-1575043694:378941..378990Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1575043694:377545..377631TCONS_00012123-exon-sc0000137-1575043694:377545..377631Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1575043694:372716..373353TCONS_00012123-exon-sc0000137-1575043694:372716..373353Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:384914..384975TCONS_00012123-exon-sc0000137-1510915933:384914..384975Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:382849..382915TCONS_00012123-exon-sc0000137-1510915933:382849..382915Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:382218..382344TCONS_00012123-exon-sc0000137-1510915933:382218..382344Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:381483..381550TCONS_00012123-exon-sc0000137-1510915933:381483..381550Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:380976..381083TCONS_00012123-exon-sc0000137-1510915933:380976..381083Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:380416..380474TCONS_00012123-exon-sc0000137-1510915933:380416..380474Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:379912..379964TCONS_00012123-exon-sc0000137-1510915933:379912..379964Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:378941..378990TCONS_00012123-exon-sc0000137-1510915933:378941..378990Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:377545..377631TCONS_00012123-exon-sc0000137-1510915933:377545..377631Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1510915933:372716..373353TCONS_00012123-exon-sc0000137-1510915933:372716..373353Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:384914..384975TCONS_00012123-exon-sc0000137-1491911889:384914..384975Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:382849..382915TCONS_00012123-exon-sc0000137-1491911889:382849..382915Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:382218..382344TCONS_00012123-exon-sc0000137-1491911889:382218..382344Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:381483..381550TCONS_00012123-exon-sc0000137-1491911889:381483..381550Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:380976..381083TCONS_00012123-exon-sc0000137-1491911889:380976..381083Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:380416..380474TCONS_00012123-exon-sc0000137-1491911889:380416..380474Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:379912..379964TCONS_00012123-exon-sc0000137-1491911889:379912..379964Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:378941..378990TCONS_00012123-exon-sc0000137-1491911889:378941..378990Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:377545..377631TCONS_00012123-exon-sc0000137-1491911889:377545..377631Clytia hemisphaericaexon
TCONS_00012123-exon-sc0000137-1491911889:372716..373353TCONS_00012123-exon-sc0000137-1491911889:372716..373353Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:372716..384975 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
89.0936	89.3277	66.9065	69.6276	106.338	72.9391	134.44	150.982	75.8232	71.6058	61.997	58.5001	43.852	43.3347	59.7587	64.0601	63.1142	79.7443	24.6169	26.8442	57.4639	56.2329	56.7662	56.0085	119.897	146.475	63.9763	48.5787	48.7471	38.5715
Blast
[Close]
BLAST of TCONS_00012123 vs. Swiss-Prot (Human)
Match: PSA5 (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3)

HSP 1 Score: 404.445 bits (1038), Expect = 6.609e-140
Identity = 190/241 (78.84%), Postives = 214/241 (88.80%), Query Frame = 1 
Query:   34 MFLTRTEYDRGVNLFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVVLAVERRITSPLIIPKSIEKIFEVDQHIGCAMSGLIADSRTMVDKARVEGQNHWFTYNEKMSVESLTQSLSNLALAFGNRDYDKGAMSRPFGVALLIGGIDENGPQLFHLDPSGTFLQYDAKAIGSASEGAQQTLQEVYHKSMTLKEACNQALTILKQVMEEKLTATNIELATITVADNFKMFSKDQLEELIKEI 756
            MFLTR+EYDRGVN FSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGV LAVE+RITSPL+ P SIEKI E+D HIGCAMSGLIAD++T++DKARVE QNHWFTYNE M+VES+TQ++SNLAL FG  D D GAMSRPFGVALL GG+DE GPQLFH+DPSGTF+Q DA+AIGSASEGAQ +LQEVYHKSMTLKEA   +L ILKQVMEEKL ATNIELAT+    NF MF+K++LEE+IK+I
Sbjct:    1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241
The following BLAST results are available for this feature:
BLAST of TCONS_00012123 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSA56.609e-14078.84Proteasome subunit alpha type-5 OS=Homo sapiens GN... [more]
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