TCONS_00012176 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012176
Unique NameTCONS_00012176
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length640

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012176 ID=TCONS_00012176|Name=TCONS_00012176|organism=Clytia hemisphaerica|type=transcript|length=640bp
GAAAAAGCATCAAAACGTTTGGAACTATGGAGGAGCTCTGGGAGCACACC
AATCATGACGTGTGCAGCTCAACAACATGAAAGTTTGTcgcaagaagaaa
aaaatgtacagtCCGTACAAGAGAACCCACAAGCAGTTtgcgtgatgacg
tgatagggactttGTTGcagcgtgattgcgtgatttggaatttttgtctt
cgtgattgcgtgatgagaGGTTAAAACGTGATCGtggtttgaaagatttt
tgagggGGGAAGGGTAAACTAATTGAAATATGTCAGCTCGTACATTAAAG
TTATCATGAAAAGTAAAGCCATTTGTTGGAGATTAATTCTAAATGGAATG
ATGCGTAAGACATAAAGAATTTTCTAgatgtttaaaaacaaaagtttttt
ttactttacatAAAATGTTTATTCAATGTTTTTGCCTCGAAGTAATaatt
tgtacttttacggtgtgacgggattggctcTTTTTtaagtacggtattac
gggatttgatgaaaaaacaGACGataaaacggtattttaaaatcagacgg
tgacgatATTTAGCCTTATTTTCTGTCATTGTGCCAGTATAACctctaca
aaccggtgtgacggtgttatcatttttttttaattttcgg
Run BLAST on NCBI

transcript from alignment at sc0000141:508662..524513+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012176 ID=TCONS_00012176|Name=TCONS_00012176|organism=Clytia hemisphaerica|type=transcript|length=15852bp|location=Sequence derived from alignment at sc0000141:508662..524513+ (Clytia hemisphaerica)
GAAAAAGCATCAAAACGTTTGGAACTATGGAGGAGCTCTGGGAGCACACC
AATCATGACATGTGCAGCTCAACAACATGAAAGTTTGTcgcaagaagaaa
aaaatgtgcagCCCGTACAAGAGAACCcccaagcggtttgcgtgatgacg
tgatagggactttGTTGCAGCCtgattacgtgatttgaaatttttgtctt
cgtgattgcgtgatgagaGGTTAAAACGTGATCGtggtttgaaagatttt
tgagtcgtgatacgtgatttggactttttttaaagggatgcgtgatcttc
cattttcttttttgttgatttgcgtgatcgtgattgtagacaaaaagtgc
gtgtgatatcgtgatcagagttaccgNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNggggggggggggggtaaactaATTGAAATATGTCAGCTTGTACA
TTAAAGATATCATCAAAAGTAAAGCCCTTTGTTGGGGAGAGTAATTCTAA
ATGGATTGATGCGTAAGCCATAAagaattttctagaaattttttttactt
tacatAAAATGTTTTGTTCAGTGTTTTTTGCCTCGAAATAATaatttgta
cttttacggtgtgacgggattgggtCTACaagatttgacgaaaaaacagA
CGataaaacggtattttaaaatcagacggtggtcgggtgagttagggcgt
gtctagatttttaaaaatcacaaatcccgaatccgcgaccaatagcaccc
attctcagggattcacttatggatttttacATGACCTATACCTGAAGGTT
TCAGGACccggttgttacgtaattaaatattaacctaaaaattaattatt
aaagaaagtgtgaattatgacgtcatcaaattatgacgtcataaatcgta
aattagctctaactctaAAAGTACATGTCGAATCTTtctcaaatttggac
caaagatgTATGTTAATGGTGtcaaacttttcaataaaaatattttgaaa
attttgatgacgtcagcaaaaaatacaaaaaatcgaaaaatgcaattttt
tgctgacgtcatcaaatttttccaaattttttttttcaaaaagttacatt
tcagttagatgcatctttggttcaaatttgggaaaGATTGGACATGTACT
TTTAATATTATGGCGATTatacgattcatgacgtcaccaaattcgatcaa
attatgacgtcatgattacaatttctttaataattaatttttaggttaat
atttaattacgtaacaaccggGTCCTGAAACCTTAATGGTAAtttagagc
cctaagtggatctctgaatctggcttatattggtagcgaaaacttagggt
aaactgttaggtttctgagacttgccctaagtcactcgagGTACAGTATT
TAGCCTTATTTTCTGTCATTGTGCCAGTATAACctctacaaaccggtgtg
acggtgttatcatttttatttaattttcggtattctgggattcagcaaaa
atattGACGGGAAAATGTCTCTACAATCCCCCCCCCAAATTGTATTTGAA
GCAAACTTTAATGTATCTTCTTCAAAAGAGCAGACGTCTAACAATATTGT
AAAAGTAATGTAATGCAGTAGACttaatttttcaataatattttgtaTAA
TGATTACGAATTATGgagtaaaatttgtttttgttatcAATTTTTGCACT
TCTAATATtactaacctgagatcagattgtgattgttttctgtcGAGAat
gctgaagctctaaagggatgggtgtaaacataacaatctgaagAATATGC
TATTCAAAAATTGTAAGGACTGCACTCATCTAAAAGGACTGTGGTtaaca
acaaagttgcgtgattgtgcttatgaatagggcgccgtatcaggaaaatt
tagtttttgactttccgacACACTTAACATAAtttttgttgtagaatttt
gcgcggaaggactattttcctcagatggttaattttcaagggcCTTTAGA
GGTTAACCGTGCCCGAGAGATATCAGGTTAGATATTACCAAGCCAAACTA
TAGACAATATATATCTAGTTTATATCAGGATAGCTCGACTTTCTTTTTTT
GCATAgacttattttttgtaaaaactacTTCAAGTGACGAAGATTTCTTA
ATATTCGGCAATTTTAGACAAAGTTTATTCttgcaaaaacaaaatttatc
tTTGAAATCCAACAGTAGGAAATTTACCACCCGGACATTGTAacttttga
ccccccccccccccagacagcattagttgaccccatggacaatcaaaatt
acccccaaacaaagcaaatttaccccccggacattgtgacttttgacccc
cccccccaccagacagcattagttgaccccatggacaatcaaaattaccc
ccaaacaaaGCAAGTTTACCCCTCGgataaggcaaattttgtagattttt
tactACACCCGGACACTTCTATCCTCCACCCTCCACCCTCCCCCCATGGA
AGGACATTTTCTGAAAGAGCCCAAAGCTTGACTTCAGTTacagtaaaatt
ttcaagtacTTATCACGTATAGGATGTAagatgtatttttttatttttgt
gtgtCATCAGGAGCTGGTTATGTGAAAATATATATCTTTATAAGGGAACA
ATCTCTGTATTGGAATTAAGTCTGAACTTGTCctcttttttcaaacaaat
gaacaacaccaaaatttggattttattaAACAGTCCTCTTTTTGTTATTT
CATACTCTATCTGATCATGTCATGTGAGTAAGTTCagatcatagaggtat
aaagaaagacaggagatgaatttgtcggtaattggtcgttaaagtctttt
gatttcttttatgtaataaatcaaaagaaattctaggctcgcNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaatcaaaaga
aattctaggctcgcccgatgaaatacgactttttagtagaactcaagttt
gctctgaatattcttactatcagcatcgaggatttctagccttctgatat
acgagaataaaataaaatttagctccacgaaatgattttgcgttcaattt
tgtcatccattaaatttttttttgaaaagatattttctccagccagaaaa
taaaaagttctttataagcacacacaattccagacccaatttgtacaggg
ggggggtcaacatttataataccaacccatagcccaaaaacctgactttt
gacctNtagtaccaataccaatctgacaaatttgagcttaaagctgttta
aaggggacccaccccctcccacacaaacagggtactaagagaaacttaaa
aaaaactcatttttgaaatactctttcttcaacacaacacaaaaaatatc
atatgctaaaatagaaaatgactgaaaactgacaatacaataaaaaacaa
accgaatgaagctagcaaaatcaatctgaatcaatattatctgaatataa
taattgatgtgcaaaaactaggagaagctattattagtacataattttag
aacagaataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtatatg
agattatgagcatgcatacctcgtaatttttttaatcgtagggcgagcat
ggttacaatagcatacttctcctgtttctttatacctccatgttcAGATC
TAGTTTTCAGTtattctgagcctcgtgtttcttacgaaatgtgtttctta
aaaaaaaacgtgtattttgatTGGATTCCAAAAACGCTTTTTAGATCTTT
TTAGATGTCAAGTTTTCCGCTCTTCAATATAAAACAATGAGTGATACTTT
AATGGAGCTAGCTCATAATGGGTCGAACTATGAAGATTTaaagaaacaat
caaaattgatAAGGGCTAGGTAGCAACAAACACGAAGGGCACGAGGAGAA
ATACAGTCtcggacaaaatatttgagacaaaggatttTGAGACAAAATGA
TTTTAAGCGCTCTAAATTACTTCTAGAATGTAGAGTTTTGAAATGAgcct
taagacttaggaccttggctcaaaattgttcaaaaaaggCTGGGAATATA
GCCAAGATGCCACTGAACCCCAACGGgatcaaaatattcaatgaaataaa
gttaaaacacacagaattctcaatatatttcgattaTGGTTGTTGTCCAA
CACTTTCTAGCCGACAACAAAATAGTCCGAATAGTCCGAGGAAATGGAAC
TAACCCGGAAGTATGTCTACTCCGACTGCTTTTTTGTCCGAAAATGGTCG
CACGATCTTTTATCATTTACAAGCCTTTTCTTTTGTCTGGCAGCGACCAA
ACCAAAAACTTAAACGGCTAAGAAACTAGTCTAGCAtgtaggaagtagaa
aacttgacaggagcatcaatatatttatttattttaaccatatcccgaca
taaaaattttaaacaaaaaagttatacggtaaacgactggattcccagtc
tactAAGAAACTAACTATTTCACCTATCCCCATCACTttgattttcatct
ttttaaaaatcacctCTTTTTATATATTGCCACTAATCAGTAGACCCTCC
TCccacaaaaaatgtttttttctaattGCGACTAAAGATCAAATCTTTTT
AGATTACAAGCCTGTGTAATAGACAGACATTACAGGTTTATTCCCTGCAT
CATGTAACCTCCAAGCAGCTATTCGTGCTCCACGCATTCCAATGGTTCCG
CAAAAAGACCTGCAAAGTATCTCAAGTTTCTTTGATGGCCGAAACTCTGA
TTCACGATTCAATCGCGGGAGTTcgaataaaattaaattgattAGCTCGG
ACAGTCTTAGGAAGCATGGGCTAAAAAAAAATCGATTCTACTGCGACAGT
GGCTTTCTTGCTCCGAACCAAATCCAAGATGGCCTGAAATTCACGTTTTA
GATCTTgtcaatattttgaatattttatggATTTTGAGACTTATAAATAG
TCCaggagccaaatcctatatctccttaaataagcacttttgcttaaccc
atgattctacaggataaattatatatttttgaaatcctcaactatcctag
tttaagaaatgATCAGTCCctaaagctaactcctggtcaatttttcatac
tgcaCCCGAGTTTAGGAGGTATTTTTTACCCTTtctaaggatttgttaag
gaaaatattttttcatgtatgatttaatttaatttgctatatctcatgAA
TAGTTTATCCTATAGAATCTTGGGctaagcaaaatgccatttttcaggtt
tggctcccggactaaaaGAAAGTTCAATGTTTCAAATGTTGTTTATTTAG
TTTAGTGTAGCTCTCTTACACCCACAGAAGTGGCTGCTCATACTTATTGA
CCTAAAAGCTTCGAAAGactgttttgaaagaaaagccATAAACTTCAAAG
TCCCGTACCATAATTTTCCGGTGTGacattaaaaatgttaaaaagcttTA
TGGACGATAGAATCGTCTAAAAAATTTACTGAATTCCTAATATTTTTGCT
TTGTGAGCTTTTCGAGTTTCCCTGGATACATGTGAGAAAAGTCAAAACTA
TCTTTATCTTGAGAAAACACGTATCACTCCATCTAGCGAATTTAATATCA
TCTAATTAATCTTCTAATCTTTTTTAGCATGTCGGACTTCGGATTTCGGG
CGACATTTCAGCGCAGCTGTTTTATTTGAACATTGTTTGCTGATCTTATT
GAATTATGTGTAGAGAATGAGTGTTGTGAGGTTGTTCAATGATTTGATAT
AAGTTTCTTCTGttaaaaaaccatttcaaaatgTGGCGTTAGCTACCCTC
ACAACCTTCTCTaatcaaatgaaaatttccatAGCTTTTATAGCTTACAA
ACATGTCAAAATATCCAACAATGTCATTAGGGAATATAATTATGCatgca
aaagaaagaaaagggaTTTCTAGGTATGCTAGAAATCCCTGATGACTAGA
TTATAAACAAATTCTTATAACTCATTTGGGATTTAATGTATATCAAATAA
TCTATTCATTATAAACGTAAACAAAATTCCTCATGACATTTAGGAATAAa
gttaaacacaaagaaaagctCCATTGGTGGAGCGTGCGCGTCAAAGTCAG
TTATAACACAACATTTTACAATACTAGAGAGGagagaaattttctttaat
tttataataataaactttataagaataatcatgatgaaattggccaagaA
ATTAAGAATTTGCTTAGAACATCATCATCATGAAGTTTGGCAGTAGAGCC
TAAGATTGCTGATTTTAGAACCTTTTAAAATGTAAGTTGCAATCGTCCCC
CATTAAGGTTCGAAGTTTTCGCAAAAATGCTATTTTATGATTTAGCTATG
TACTACATGTCAAAGTTAGGTGAAATTATGATCATAGCCtaaagaatacc
gtaagaatagtTTAGGATgctttttcccaaaaagttaaaaatatccatga
tgaaagggaaaaatatcattcttataaaaaaaagtgtgtacaccgttttt
tataagaatacactttacaAGAATGTCCataatgaaaatggccaaaaaaa
ttagaataatgctataaatatcaccatcatggaattttgctactcaagct
aagaatgccattttttagagcattttcaattagaaattgtcaattacccc
caagtaaggctcattcctttcacaaaaaggcattttatgcttgagacgta
tgcactaaattttatatttagtctgaattaggattaaaacctaagaatgc
tgaaagaatattttaggatgagtTTCCACAAAAAATGTTAacaatattca
tgatgaaatggaaaaacatcaTTCTTATATAGAAAGCGTGTATTGGAAAT
GAAGTGATTTAATAAATAAGAGCATCGGATTCATTATCACTTGAGCGAAG
TTATCAACGGACAAAAGAAAGTGATTTAATTAATGAGAGCGTGAGATTCA
TTATCACTTGAGCGAAGTTATCAACGGAGAAAAGAAAGTGATTTAATTAA
ATGAGAGCATCAGATTCATCATCACTTGAGCAAAGTTATCAACGGAGAAA
AGAAAGTGATTTAATTAAATGAGAGCGTCAGATTCATCATCACTTGAGCA
AAGTTATCAACGGAGAAAAGAAAGTGATTTAATTAAATGAGAGCGTCAGA
TTCATCATCACTTGAGCAAAGTTATCAACGGAGAAAAGAAAGTGATTTAA
TTAAATGAGAGCGTCAGATTCATCATCACTTGAGCAAAGTTATCAACGGA
GAAAAGAAAGTGATTTAATTAAATGAGAGCGTCAGATTCATCATCACTTG
AGCAAAGTTATCAACGGAGAAAAGAAAGTACTTGATTGACAAAAAAATGG
CGATCAAAAATCTGCTCATcctgattttactttttacagTTGTTTTACAG
TGGTTTTGTATTTGCAGTAATGATATTACCATGCCTCACAGGCAGACTGA
TTTCTCAATGCTCAGCTGCACGGAGATAAGAAATATCACACTCGTGATGG
GAATGTATGAAGATTATAAGTTTTACCGATATTTTAACGATTTGATAACG
AACGAGTATTGTTTTTACGTTAACATGTACCTCAACAGTGAGGATCGCGT
GGTTCGCGTACGGAATAGTAACGATCTGTTGTACATCATTGAAAGAAATA
AGCATTATTTCGAAGATGGTAGGCTGGTGAAACTGGTAGACCGTTTATAC
GAAGAGAAAATATTTGGTGATGCTGATGGTATAAAACAATCATTTATCGT
CATAAACTTTCATATCGGAATAAAATCAGTTTCTTCAAGTCTAAAAAAAA
TGCAGAATGACAGGAAATGGGATATTATCATTATGTCATGGAATTACAAA
TATATTTTATGGCTAGACTGGCTTCCACTTCATCGATTTATTCAGACACT
CGTGTTTAGTGATATTTATCTCATTAATTTAATTGACGTCATTAAAAACC
CTGATTATGACAGGTATGACGCAGCATATCAGTGGATTTCATCCAGAAAC
GACTTGTTTAATTCTTCGTGTTTCGGTAAGATCGACAAAATAAACTTTAT
GGTATATAGTTTTTGGGAATATTACTTTCCCATGACATTGGCAGtgttaa
gaaaagaaaatgatcGTCGAGAGCAGGAAAAACTGAAACCCTTGAGGATA
ATTTTCTGGAATTACAACGGTTATTATGCAAGAATAATTGATTCGAAAGG
CAAGGCAGGTGGTGAATATGTGGAGTTTGTGCACAGATGGAAAAaccatc
ctctatacaataattATAACTACACGAAAAACGAATGGGAGATTTTTATT
AATGTGATAGATTGGATGCCTGAGTGGGTTTGTGAGGACTACAAAACACT
TTTACGAATCCAAAATTATCATTACCAAGAGTTCAAAACACGATATGAAA
AGAATTGCTACAGCAGTGAAAGCATCAAAACGTTTGGAACCATGGAGGAG
CTCTGGGAGCACATAAATCATGACGTGTCAGAAGCATCCGGCGACGACCT
TTTTTTGAATATCTGCTGTTCGACCATAGTTAACCTAGTTTTTTGGATCT
gttgttcaaattttttgaaatccctACTCCTAGAAATATCTATGTGCTGT
TCTCTTAAAATGTCAAGATAACATTAGAAACCCTTCTCCTAGAAATTTGG
ATCTGTTGTTCAGCTAAAATCTACTTCTTCTCTCTTCCTAGAAAATGTTT
ACGATCTGCAGTTCCCCCTTCTCCCCCGCGCTTCTCATCTGCTGTTCCAC
ATTTTTATCCGCCCTTCTCATCTGCTGTTCTACATTTTTATCCGCCCTTC
TCATCTGCTGTTCCACTTTTATCCGCCCTTCTCATCTGCTGTTCCACTTT
TATCCGCCCTTCTTATCTGCTGTTCCACTTTATCCCCGCCCGTCTCATCC
GCTGTTTTACCATATCCTTCTACTTTTCTCCATATCTGTCCCGCCCACCG
TCCAGCCAGCGAGAAGAATAGAACGAATACATCTAAGCTATTTGACCCGC
GCACTATGAAAAAGTATTTCCGGGGGTAAAGTTGAATCTTTCATGAAAGA
TTTTAGTAGAAAATAACCATTATTTTGTCCTTCGATCACTTNCCGCGCac
aatgaaaatatatttcCGGGGGTAAAGTTGAATCTTTCATGAAAGATTTT
AGTAGAAAATAACCATTATTTTGTCCTTCGATCACTTATTTTTGGTTGAT
AATGATAGCAATATTAGTTGTTGGTAGCCTTTTGATGCctattatttgtt
ttttaaaaaatttcttgacCGCTTTTGTTTTATCCTAAACCCCCTGTATT
CACTACAAACAAGATGAAAATATTTGCGCGCCTAAAACCACGAGGAGTAA
GAATCAATATGGTCGATGGGAGCTCCTATCTGGTCGATGGTCacttcaaa
atttaaatatttatttattggGAAAGTATTTTGTCTTCGATCAATTTGAT
GGTACATTATGGtacttttttattgcttttttgtATGCGTCGAGGGCTTA
TTATAAGTAGAAGCCAGCTTCTtgtttaaaaactttattttgtgTGTTGA
TTTCCCtaagtttacaaaaattcaatcAACTCTGTCATCAGATGTAGAGT
TTGTTTTGAGAATCTTTCTTGATAATTGTACCTAAAACAGGGGGTTGGGA
AAGAtctgcttacaaaaattaaatcgtctCTGTTATCGGAGGCAGTGTTT
AAGTACGTTTGCGGCTTctatttttctatcaaaaatgttttctaaaagat
ctgcttacaaaaattaaatcgtctctgtcgaggcagtgtttaagtacgtt
tgcggcttctatttttctatcaaaaatgttttttaaaagatctgcttaca
aaaattaaatcgtctctgtcgaggcagtgtttaagtacgtttgcagcatc
tattttttatgttttatgaaAACATTGGCTTCAGAAAGATtgttcacaaa
aaatgaaatattctcTAACATCAGAGTCAGAGTACTTTTGCAGGTTCTGT
TTTATGCCAcattaaaaagatttatttaaTTAAAAAGAATGCAAGAAGGG
AAAGGATGTGTCCTGCATGTTTCTATGGGATTttgttttcagttttcatt
tttctcactaTTGCTTTTTTGTCAATATTGTTGTTATTTCAATGTCTTTT
TATTTGTCTGTATAGAGAGTTTGTTTCGACATTTTCTTGATCTTATTTGT
TGACTCATTTCAGTTGATTTTGTGTCTATTAAGGTTGCATTAGCTTGGAT
TGGTTGTTTTGGATTTGACTTGGGTTTGACTTGGATTTGTTTGGTTGCAA
AACGCATTGTGTAGTTCAACAGGTGTTCCCAGGTCATTGTTCATGCTCTT
TTAGCAACTGGTTATCTAAtgctgcccctcctgaaattaTTACAGCCTTT
TCACTggaaaaaaaaactagaaaaagtgcatttttttgccNCAAAACGCA
TTGTGTAGTTTAACAGGTGTTcccaggccatttttcatgctcttttagCA
ACTGGTTATCTAAtgctgcccctcctgaaattaTTACAGCCTTTTCACTg
gaaaaaaaactagaaaaagtgcatttttttgccACCAATAAATGTCGCCC
TGCCTTTCTAAAGAGAATGGTCTGGTTCCTCAGAACTACCTTTGCGTACC
CCCATTGTTGTGTTTTTTATGTATAGTGTTTGAAGGAGGTAACTTGCCAT
CGCCCTAGAACACTGCACTTGAAAAAGTATTCTAATTCAAAgtcttttca
ttaaaatatgtAACAAAACCagtgttttacaaaatattttcaaatatcaa
CTTCCCCTACCACTGTATAACTGAATCAAGTCTAGGGCGATGCCTGGTCC
ACAGTCCAGGAATAGGCATGGTTCAATAATATCTGCTATTTGAATCTGTC
AGTAAAAAGGATGGGCTCCTTCAAGCActtaattttacaatttttttttg
gaagctAGTCGTcagatgattttctttttccagaaaTATATTACACAAAT
TACCATGCTGGATTGCCATATTTTTGAAGAGTTTGAACTTTCTTCTTATC
ATAATTCCTACAGATTAGAGCTAAAGCTTCATATATTTTGTACCCTCAAA
CTAGTTTGATTAttttgctaagaacattttaaggctttgctaaCTTTTGT
AGACTTGAAATCACCTGGTTTCTGaggaaaatggataaaattactcacaa
aagatggtgaaaataagaacatgtattaaagaacattcaaagtcgtcaaa
aaattaaacgttcttataaaaaaacgtgtgttcAAGTTCTTTGCAGTTCT
TTgtcatgtttaaatttttttatgattagaaaaattattttgagaatcTA
TGTATCAAAACTTTTATAAAATTGACAACAGATTAAAAATGAACCACTCT
GATGAAGAAATTTGGCTTAGTAAACATCAAAGTCTGTCAAATCATGCCTG
TCAATATGGATGCCTGTCCAAACAAATGTCACAGGTAAGACATTTTTTCT
TATTACTTCCATTGGCCTATCATCAGGGTACCATTTCCTGCAACACCGTA
ATGCGTAAAGACTTATTTAGAACAATGTGGAATCTCTGGTTGGATCCTTA
TAAAAGGACTTTCTGTGATGAAGGACATGCCTTTAGCACAAATAAATCGA
AGAGGTGTTTCAATGTGTGCTTTTATCGTTCAAACAATCATCCTTTATAT
TTTTAAGGTATTTTGGCCAAGAAAATTTGAGGAAAACTCGTCCAAGTAAA
ACAAGGAATTACGAGATCCTTATTCACCAATTTTATGAAGCAATATTCAC
CACCATAAAATTTGATTCAGTCACATTGAAAGGTACtggagtgatttttt
tcttatggccattgtgcggaaaggggtctgatcccccatCTTGGCATCCC
CTAACCTTTAAAAANTGgccatagtgcggaaaggggtctgatcccccatC
TTGGCATCccctaacctttaaaaatgcctatccccaaggattttggacaa
aataGCTAACACATATAATGGTGAAATATAAATATATTAGAGAGAAAGAA
ACAGAATAATAAACttaactttcttctttttgactcagactactctaaca
gaaaacttgCTTTCATAAAGACCAAACTTCATAAcctgtgcttgaaaata
atctatatacaatatatttttcatgaaaatttctgacccccctcttcttc
aatttttcgaaAGGTGTCATCCctcccttaagaaaggggggggggcgaaC
TATGATGGCTTCATATAACACATATTGGACCAATAGATAGAACttttaaa
tgttaaatttaATGTTTTCCTATTAGAGCCTTGGGGGCACTTAATTCAGC
GGATTTGGCAAAAAATCccccaaatttaattttttctgtcgCCAGCCAAA
TTTGAATTGTATTATGTATTCATTTGATAtggtttttgataaaaaatatt
cttcatctgccaaattaaactcttgaagatttaattttttaagCCATTTG
CAAAATGAAATTCCCTTCTCTaaatgaaatttttgcaaaaatgtcttttt
ttaagGTATATACTCCTAATTTTATGGCTATGATTTTCCATTTTCTACCT
CTTAGGTTTGGAAAGATCAGTCTTTGGTCAAAAGAGAAGTTCTTTATTGG
GATCGTGAAGATtgtgattttttattatcaaactGTCTACGGATTCACTC
GTCGGAACATTTAAAAGTCTTCATGAGAATTTTATCATTagcaaatattt
tattttttcaatcatttcatCATTTCTATCATATTTCATTAAATTTAGCC
ATTGGACATGGCCATTTTTCAAGATTCTTTCAGGGTTATCGAAAGCACTT
GCATAAAATATCCTACATCCCCCATGAACAGGTTTTTCGGGAAGATTCCA
ATTCATTTTTTCTTAAGTGGAGGTCCTCCTTATCGACAGTGGGTTGAACG
Aggactactttaatcgtagaaattttagagatttatccacgcgaaatttc
tggttaaaTTGCCATGATACATTTTTAACAATAGGAAGGGTTttagtgca
aagaaatgctagaaaatgAATTCGATCAATAATGAAAAACGAGTATTcac
taaaatttatccacgcaaaattttttgaaatcgtgattcgctaaaataaa
tccaaaaaaaatcaagattttcctggctcgctaatatacgctaaaattag
tctcgctaaaatttctacgataaTAGTACCTTAAGGGAGCTAATTTTCGC
AATAATGGCTCCGCAAAATACGATTTTCACTAAAGATCTTCAGAACTGCT
aggaaaacaagaaaatttaGGCAAAAATTGGGTGTCAACCGCGAAAATAC
AATCGACAAAAATCGTTTATTTTACAGCCTCACATAGCGAAAACAGTTCC
CTAAGGTAATGAATTCCTGAAAACTCTGAAAAGTTTAGAATGCTTAAATG
TTATTTAATATAATTTCCTCACCTTACAAATTATAGTTAAGGAAATTTGT
AATCTATTTTGTATTAAACCAATGacttattttaagaaatattaaACAAG
ACTGAAATAAACCTATTCTTAAATCCTACCATGATTTTATCAAACATACA
CATTTCTCTTAATGATAGGTTGCGAAAAAACCATTGAAAAAAATGGTCCT
GAGAAGACCAAAATTGGGTGGTCTCTGTCTAAATGGCCCCATAAATTATA
GactaaaataccacttctcTTAAATGCGGTGTAAGAAATGCAAGAAATTC
TCGTAAACCTTTCTAGTACTCATTATGTCCAAGATTTTCGTACCGAACCC
CCCCCTCCCTGTTGTAATATGTGTCGATAGGAGTCTAACATCGCGAAAAC
TAATGGTTTTCAATCAAAGTTAAGATTTTGGTCCTTTTAGACAATTATTT
AAGGTGATTTTTCGCTTTTCTGTCCTCTGGCAACATTGGGTATGCCTagt
aaattacaaacaaaatcttAAATCTGCTGTACCGCTTGCTGGCTCGCTTA
GTTGAAAATCTATCTGTTTTGCCCGACCTAGAAAATACGATCTGCTGTTC
ACTGATTACGTCATCATCTAAAAATTATTATCTGCTGTTCATTGGTGTGT
TTTGCACGACCTAGAAAATACGATCTGCTGTTCAACGTATTACGTCATCA
TCTAGAAATTATTATCTGCTGTTCTTTGGTGATGTCCCCATCTAGAAAAT
ACTATCTGCTGTTCATGAATGATATCTTCTCCTGAATAAGAACAGCagat
aatttgaagaaaacaagCCATCCTAGAAAATGGGATGTGCTGGtcacttt
caaagaaaaacccTTCACCTGGCAAAGAACAGCAGACATTTCGTACAAAT
GGCTCGCCGAATGCTTCTTACGTGTGCAGCTCAACAACATGAAAGTTTGT
cgcaagaagaaaaaaatgtacagtCCGTACAAGAGAACCCACAAGCAGTT
tgcgtgatgacgtgatagggactttGTTGcagcgtgattgcgtgatttgg
aatttttgtcttcgtgattgcgtgatgagaGGTTAAAACGTGATCGtggt
ttgaaagatttttgagggGGGAAGGGTAAACTAATTGAAATATGTCAGCT
CGTACATTAAAGTTATCATGAAAAGTAAAGCCATTTGTTGGAGATTAATT
CTAAATGGAATGATGCGTAAGACATAAAGAATTTTCTAgatgtttaaaaa
caaaagttttttttactttacatAAAATGTTTATTCAATGTTTTTGCCTC
GAAGTAATaatttgtacttttacggtgtgacgggattggctcTTTTTtaa
gtacggtattacgggatttgatgaaaaaacaGACGataaaacggtatttt
aaaatcagacggtgacgatATTTAGCCTTATTTTCTGTCATTGTGCCAGT
ATAACctctacaaaccggtgtgacggtgttatcatttttttttaattttc
gg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006854XLOC_006854Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012176-exon-sc0000141-1491911889:508662..508720TCONS_00012176-exon-sc0000141-1491911889:508662..508720Clytia hemisphaericaexon
TCONS_00012176-exon-sc0000141-1510915933:508662..508720TCONS_00012176-exon-sc0000141-1510915933:508662..508720Clytia hemisphaericaexon
TCONS_00012176-exon-sc0000141-1575043694:508662..508720TCONS_00012176-exon-sc0000141-1575043694:508662..508720Clytia hemisphaericaexon
TCONS_00012176-exon-sc0000141-1491911889:523933..524513TCONS_00012176-exon-sc0000141-1491911889:523933..524513Clytia hemisphaericaexon
TCONS_00012176-exon-sc0000141-1510915933:523933..524513TCONS_00012176-exon-sc0000141-1510915933:523933..524513Clytia hemisphaericaexon
TCONS_00012176-exon-sc0000141-1575043694:523933..524513TCONS_00012176-exon-sc0000141-1575043694:523933..524513Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000141supercontigsc0000141:508662..524513 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.246945	0.08027	0.372805	0.182366	5.99434	2.807	3.91567	3.17042	1.66477	3.69456	3.16905	0.603034	3.01098	1.59189	3.08492	3.71187	0.926903	0.6967	2.01256	2.01443	0.0795868	0.349377	0.0943807	0.343223	0.618645	0.15775	0.33861	0.120458	0.0913632	0.372338
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012176 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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