TCONS_00012193 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012193
Unique NameTCONS_00012193
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2957

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012193 ID=TCONS_00012193|Name=TCONS_00012193|organism=Clytia hemisphaerica|type=transcript|length=2957bp
TAAGACCAGcttttgagagagagagagctcGTACAACTTTCACAAATTAG
TGTGTTTGGGGTCAGGGTACCCGATCTTTGACTTATATATTGATCGGTGC
GCCTCTTTATCGAGGACTAGTGACGTCAAACTGGCTTCTGTGGCGAGCTT
CGAACACACGCCAACGGCTCCGCGAGTCCCAAACACGTTGAATTTGCCAA
AAACACAACAGAAAAAGAACGGTTTAGGAGGCCATCCAACTAAAATGGGT
CGAAAGAAAATCCAAATCTCTCGAATCAACGATGAAAGGAACCGTCAGGT
CACCTTCACTAAAAGGAAATTTGGTCTGATGAAGAAGGCTTATGAACTAA
GCATCCTGTGTGATTGTGAAATTGCCTTGATTATCTTCAACTCCAGTAAC
AAGTTATTCCAATATGCAAGCACAGACATGGATAAGATTTTGCTGAAATA
TACAGAATACAATGAACCACACGAAAGTAGAACAAATGCAGATATTCACG
AGAcaatttcaagaaaagaaaacaagaatTGTGGATCTCCAGATGATGAC
TCTTTTGTCCTTACTCCAAGAACTGAAATGAAATACCAAAAGATTAACGA
AGAATTTGAAATTATGATGAAAAAGTCCTCAAATGGGGTAACTTCAAGTT
ACCCACAGATGGGATCCTTACCACACAATATGCCCTCTCCCCATGACGAT
ACTGGAAAAGATATGAGATCAACAACTCCTTTACAAAGAGATGGTAGATT
GTCTGCTAGCCCACACCCTCATGCACCGCTTCATCATGGATTAACATCAC
CGCCACCACAAAACTTATCTTTACCAAGTCGCAGTCCACACCCAATGAAC
CCACCACCTCTAGGAAACACGAATAACAATATCAGTCGAAGTGGAACACC
AAACATGAAACAAGGAGGAATGCAAAATTCACGAGCTCAACAAAATCACA
CACCGAATCAACAACTGATGCATGGAAACATGGGAAACTCTGAGTCAATG
CCAAACAATATGCCTAGTCAGACCTTTGGAGGTGGAGGAGGAGGTGGCTC
AATGCAACCGCCAAGCTTGCCATCAAATTTCCCAACGAGTTATTCAAGTT
ATGATGTAGATACTGGTCAAATGTCTTATGGAGTTACCTCAATGAACAAC
AGCATACATTCTAGTCAAGCAATATCCCACAATCCAACACTGCAAAGGTC
ACACAGTTTGAACAACAACAAACCAAACATGAACATCAAAGTTGAGCCAC
CAGACCACATGAGGGGGCCGTCCCCTTCTATTCACAACTTTCAATCTCCT
AATCCATTTCATCATACTGCGCCACCATCGCACCATAAAGACTTTAGTGA
CCAGAATAATATGATGTCACTTGGTGGTGGTGGGCCTATGTCTAAGAGAC
AGCGTATAGAAGGCCATAATGATGGATGGCAGTAGCCCAGTTTAGACACT
GTGTCAATGATAACGCAACATAATGCGGGTAAACCCACCATGCTAGCCTG
ACAGATAGGCTATAATCACCATAATTGGGTGTAGTAGCGCCATAATGAGT
TAAATTATGCTTTTCACACCTCGTTCAGAAAGATTGGATGGTTTCTTTTT
TGAGTAATAGTTGGTTGGTGtttatttttgctgctggaaCGAAAGTGTAT
TATTTTCCCTTGTTCCTGTATAAACTTTCTTAAGAAGGCATTCAGTTAGT
CTTTTTCATCATTTATAAACTCAACCTTGTTCATATACTAAAGACAGTTA
ATTGACTCatttaaggaaaaaaaaactaaaattttctttcaattttttaa
aaatacttttcatttctttttccaatatatttttttgttgttttgttcaC
TCGTATAATTATGTAaatagtttttcttaaaaaagccaaaatttaaGACA
ATGACAGTTTTTATTATTGAAATAAGGcgcttttttaatatttgcaaGAA
ATTTTATTACGGATTACTAGTCAACTTTATCcaaattatttttgggggtA
TTTCAACAAGTTAGGTGTAACATAATCTTCCAAACTTTTTGTTTCTGACA
GTGACGAGCTACTCTCATGTACCTAATACTtcaatcgtagaaattttagc
gagactaattttagcgtatattagcgagtcagtaaaatcttgattttttt
tggatttattttagcgaatcacgatttcgattcggcgtgttttagcgaga
tttattttagcgaaaatagggaaaactcgctaaaacgctaaaattagtct
cgctaaaatttctacgattacaGTAGCCGTCTCCCTCCCGCTAAttaatc
tttcgaaaattttccacccaggacatttttattggaaccccctccccccg
cttattaagttttgaggtTTTTTCCAACTTCCcctcccccggctattagg
tacccgagagtaacccAATTCATGCAATCTTTAACTCACTCCTCGGGCGA
ATGTCTTACTCCAAAAAATCTCActtaaattaaacaaaaaatgctTGGTT
ACGTCAATTTCGCATTCCCTGAGTTTAGCAGCTTGAGaagatttgtttat
tttataattttttcgtATATGGTTCAGAGATTTGCTGCAGTTTGTTTTCT
ACtttcaatgtatttttcttAGCATGATGTAGTTTTGTTTAGTCTTATTT
TCAATTGCTTCATCTGATCTGAGTGCTTGAAATATGGATTgaattcttgc
ctttcatgaaAATCAGATCTTTCCTAGTTTAAGCCCAccttatattttat
aaattttttcttttgaatggtagtagaatttgttttgaaaatggagtATG
AAAGCTTGTATTCATGTAAATAGAACACACCCTCTCTCTGAAACATACGG
Tttggaaaaagacaaaaagaagaaatgacaaaatatgacactttcttttt
cattttcattttttttcaggattttgtGTCTAAATAACTATACAAACCTA
TCCGGAC
Run BLAST on NCBI

protein sequence of TCONS_00012193-protein

>TCONS_00012193-protein ID=TCONS_00012193-protein|Name=TCONS_00012193-protein|organism=Clytia hemisphaerica|type=polypeptide|length=396bp
MGRKKIQISRINDERNRQVTFTKRKFGLMKKAYELSILCDCEIALIIFNS
SNKLFQYASTDMDKILLKYTEYNEPHESRTNADIHETISRKENKNCGSPD
DDSFVLTPRTEMKYQKINEEFEIMMKKSSNGVTSSYPQMGSLPHNMPSPH
DDTGKDMRSTTPLQRDGRLSASPHPHAPLHHGLTSPPPQNLSLPSRSPHP
MNPPPLGNTNNNISRSGTPNMKQGGMQNSRAQQNHTPNQQLMHGNMGNSE
SMPNNMPSQTFGGGGGGGSMQPPSLPSNFPTSYSSYDVDTGQMSYGVTSM
NNSIHSSQAISHNPTLQRSHSLNNNKPNMNIKVEPPDHMRGPSPSIHNFQ
SPNPFHHTAPPSHHKDFSDQNNMMSLGGGGPMSKRQRIEGHNDGWQ
Run BLAST on NCBI

transcript from alignment at sc0000141:118380..127765-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012193 ID=TCONS_00012193|Name=TCONS_00012193|organism=Clytia hemisphaerica|type=transcript|length=9386bp|location=Sequence derived from alignment at sc0000141:118380..127765- (Clytia hemisphaerica)
TAAGACCAGCTTTTGAGAGAGAGAGAGCTCGTACAACTTTCACAAATTAG
TGTGTTTGGGGTCAGGGTACCCGATCTTTGACTTATATATTGATCGGGTA
TGCAAAGCTTTTGTTACTTTTCTTTACTTATTATGAAAGTATTACAATGT
TCTAATAAGCTTCTCTTTGAGAAAAAAATTCTTTCAAAACTTGTTCATTA
TAGCGTGCACCGTTTATTATAAAAGTTCAACTTCGGCTTTATAGTTTCTT
CCTATTAAATTGAGGTGAAAGTTATAACACAAAAATGCGTGTCTTTTTTA
TAGAAGAGAGAGCTATTTTGTCATATCTATCTTTTTTTGTTGAATGTAGT
GATTTTTAAATAGAGTTTTCAAGGCTTTTTGTGGAAGGGAGATTTTTAAA
ACATTTTTTGATGTTTTTACAATCAATAGTTTTGTTTACACTGACAACTC
AAACTCCTTTGCTCTCATAACTGTTATCTTTCCTTGAAAATAATAAAATA
AAGAAAAGGCCTTGCTTTCTATTCATTCCTTACTATGGCTACCCTCTATT
TTTCTTTTGTTATTATAACGTATACCATTTATTTTCATTTCTGTAGTGCG
CCTCTTTATCGAGGACTAGTGACGTCAAACTGGCTTCTGTGGCGAGCTTC
GAACACACGCCAACGGCTCCGCGAGTCCCAAACACGTTGAATTTGCCAAA
AACACAACAGAAAAAGAACGGTTTAGGAGGCCATCCAACTAAAATGGGTC
GAAAGAAAATCCAAATCTCTCGAATCAACGATGAAAGGAACCGTCAGGTA
TAATAAAACCTTTTAAATTTTTTGTTGTAATTTTTTCTTCTCCCTCTCCT
GATGACCTCCTACCCATCAAAGTGAAATGTATTTATTTATTTTTGCAATC
AAAATAGTGAAATTCTATTTGAAGGGCCACAGTGAGACTAAAAGTGGCCT
TGACTAGAGGATGTGTTATTGCTTTTGTAAACATTTAGAAATATTTTAAA
TGTTGAACTCTGAAAAGTCAATGAGTAAATGATTTTCAAGGTCAATATTG
AAAATATAGATTAAACAAAAATTTGTGTCTTTCATATTCAAAGGAGGATG
CTTTTTACTGACCATATCCCTGAAATCACTTATTTGTTTTACCAATTATC
AATTTTTGACAGAGGATATTTTACACCAAAATTTTTGTGGTCATATATTT
ATATGTCTGTAACAAGATACTTCTTATGCTACTCAATGAAAAAGGGTGAC
TCAAGCCTATTCATTTTCTCCTATGATTGGTTACAACTTGTAATAAATGG
GTTTTAATATATAATTATTAGGCCACAGGATAAGAGATCTAGAATTTTTT
GCTTCTATTCACAAACATCAATAAGATTTGATTATTTGAATCACTGTTTC
ATGTAAAGTTATAGCATCTCAATCAGTATTGTTTTTTTCTCAAAATTCAT
GAATAAAACAATGTATCGTATTCATAAGTGAAAATAATCAATTTCAGCAG
GAAATCTGATCAAGAAACTATCTGATACAAAAGTTCACTGTGTTATATTG
CCTTTGATTGCCTTCAACTGCTTTCAATATAAAAATTGCGCAAAAAAAGT
TGTAAGAGAATTTTTTACAGGAAGTTGTTAACATTAATTTCTTCTTGAAA
AAGAAATAGCATTCCTTTTACTTCCCTTGTCAACATCCTTCCCTTAAAAG
TTACATCATTGATCATTTTCATTTTGGTGTTGCTCATTTTTCTTACAAAA
GGGAAATTCAAGGCTTTACATATTATGAACTGTATCATTTCATTAAGTAT
CATCATATTTCAAAATCATTGACCTCGATATTGATACTGAAAATTTTTAT
ACATAATGTTTTAAACCCATGCAGTGATAATGCACCGTTGTTGTGTCTAC
TACCTATTGCAATTTGTCTACCGTCCTTTTTCTGCAGTCACCATTGTTGA
GTNTTGTGTCTACTACCTATTGCAATTTGTCTACCGTCCTTTTTCTGCAG
TCATCCTTTGTTCAGCGATAAATCTCATCTATTAATTCATAAGATTCAAT
GTCACGTAGATCTGTTTTATAGTGATTAAAAAGGGCTGATAATGGGGATG
AATTCATTTTAGTTTTATGAGAGAAATCTACATTAATTACAAATTTTAAT
GATAAATTTTAGCAGAATGCATTGTCATTTGGCATAAATTGATTGAGCGA
AAAAGAAATCAATTGATTTACAACTTGTTTTTGTCATTTATTTGTAAAAG
GATGTCATTTAGGAGAAAGCTTTTTTTAATTCCCTATAATTGCCCTCAAT
TATTGCTAGGATGCAAAAGTCAAAAGGTTCAAACTGTCATATACTTGACT
TGTATAATCAGTGACGTTATTCTGTCAAAACAAAAAAAACATTTTTTCAA
AACTCTTAAAAAACTTAAAGTTTAACATTTTTATACTTTCCTTAGATATT
TTTCTGTCTCTACTTCTAAAAGAACATTTTAACAAAAAAGTAGAATGTAG
TAATTACACAATCATTTCAAATTAATTGAAACATAATTACACTTTAATGT
TGTACCATTAGTGGATAATTTCATCCCTTTCATATTTATATTAAACATCT
AATTATTGTTTCATATTTTATAAATATTGTTCTTCTTCATTAACCCTATT
ATGCAATCTTTTACCACACAGAGAATTATTTCAGAGACACAAAGAAATTA
TGAAATTCCATATGAAAATTACAAGAATGGAAAGTTGAAATTATGTTTTG
GCTTGCCTCACTGATAACTTGTGCCAAAAGCCTGATACGTCCCAATATTG
TCTACATTCTCTCTACTTTTATGACACATGTTTCTTAATAAGANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTTCTTCACTTTTT
TGGAAGGTGTCATCCCCCCGGGTTCGAACTATGAACAGTCTAAACAAGCA
CAACAATACCACGGTAAGTGTAAACCACAGGTTGCAGGTTTCAGGTCACA
GGTTACAGGTTACAGGTCACAGGTCAGTGTTGGTCAGCTTTAATTACTGT
AAAACACAAAAAAAATGTTTGAAAAACAGTTGTTAATGTCAAAAATATAA
TTCCAAAGGTATTTTATTGATCTAGAACTATTTTAAAGCTAAATATCTAC
CCACGTGCTGACCATGTGATTTCGCGTTTTATTCCGTGTATAACACGGAC
CTGTAATAGTTGTATTATATATTACATCTATATCACACATGTAAAAAAAA
TAACTTTTCAATGTTATACGCATGTTACGTATGTTATATACAAAGAATAA
AGAAATATTCGAATATCGATCTCAACCTTTGCTTAACATAACATAACAGG
AAAATAGCTATTTCACAATCACTATGTCATATCTCATTTTATCTCCTGCA
TCACCTTGGGTATGATAACAAGAATTGATGAAAATAGCGTCAATGGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNGAGTATTTATTGTTTTCAAAACCTGTCAATCTAT
ATCCACTTGCAGCGTCAGCATCCTATTATGCATGAAGAATATTTTATTGT
TAATTGGCGTACAAAAGCTCATACTTTCAGATAACATAATTATTTACATA
ATTTAAGTGTCATTTGTTGTCAATATTTGGGGATGATGATTTGTCGTTTA
AGTCTTCTAAATAACATTATTAACATATTTTGATATTAGATTTCCATTAG
TTATAATATTTTCAGGAACTTATGTTATGAGTTGTATGTTATGAATTGTA
TGTTACGAGTGCGTTACAGTTTTCCGGTCTGTGTTTTGTTAACCTGTAAC
CTGTGACCTGTAACCTGTAACCTGTGACCTGTAACCTGCAACCTGTAACC
TGCGGTTTACACTTACCGACAATACCAGCACCAAAAATCCCTTTGAAATT
CCCAATTTCCATCAACAATTCAGGAATAGAATATTTTTCCAAATTCTGAA
ACTCCGATAATATTTTGTTTTTCTGGACTGAAATAGACCTATTTTCTGTC
TTAGACATAGGACCTAATTTCCGAAATTACGTCCAAATATTCATAAAATT
TTGCCACTCCGCCCCAAAAATTGCATGATTCTGCTCCTCGGACAACCATG
AAACTATTCAAAACCGTATATGTATAACAGTTGCGAAGCCCTCAAAAGTA
CCCTACTAATGTTAACAAATGATGACTAATGTAAAAATGTCTCTAAAACG
CAATGGATCAAAACGCGTATCCAAACACTTTCATACAAATGCTTAAAAAA
GTTGGTATTGTGAAGTATGATTATGAAAGATCTACATAATGTTAGAANAA
ACCATATTGTCGAATATTGTTCGTCAATATATTGTGTAGTCTAAGTAGCC
CTTTAGAAATAAGGTTTTTCTAAGTTTATCATTTCTTCAATTTCAGGTCA
CCTTCACTAAAAGGAAATTTGGTCTGATGAAGAAGGCTTATGAACTAAGC
ATCCTGTGTGATTGTGAAATTGCCTTGATTATCTTCAACTCCAGTAACAA
GTTATTCCAATATGCAAGCACAGACATGGATAAGATTTTGCTGAAATATA
CAGAATACAATGAACCACACGAAAGTAGAACAAATGCAGATATTCACGAG
GTATCTTACTCTCTTCATAATTATAAAGTTTGTCAGCAGCTTTCTACAAC
ACTAGCTTAGATACTGCCTTTGACTGAACCAAACCTAAAGTAGCCCAACA
GCATCAATGATAGCAGGGACCTAGATCTAGCTGGAGCCTTAATTCATTCT
TAAAATACAAGAGGAGATTGGATGAGAGTGTCCTGAAACCAAATGCCTAA
AAAATGATAGATGGTGTGACATCAGCTGAATCAGAGGGCTGTGAAGTAAG
TAAGTTCGCAGTCAAGGGCAATCTGAAGGCTCCCTTTTTTCTAGCTGTCT
TCCCTGAGGGGCACCATTCCTTTCCCTGGATTTCTGCACTTGCCCTTGAT
CAATTGCTGAGCATCAAGCAGAAAGGCATCAAGTACCATTTTGGGAATAT
TTGTTATGACCAGACAGGGGGTTGAACCTACAACCTTGTGCATCATAGCT
GGATGCTCTACCTCTATACTACTGCTAGAGAGCTGAGGAGAACTGTTTAT
GCTTTAAATTAAAATGATGTTGAACCTTTGTATTTAGAATTAGCACTTTC
AAATTCTCTCTATTTTTGTAGACAATTTCAAGAAAAGAAAACAAGAATTG
TGGATCTCCAGATGATGACTCTGTAAGGGAAATTTATCTTGACCCACCCC
TGCTTCTCCACACAATTCACATAGATCTGTAAATAAAAGCAGTGGAACTA
TCATGTCATGGGAACTATTTTCTATTTCTCAATTTCTTAGTGTGATTGCA
ACAAACAAAGAAATTTTTTATTGACCTATCATTTATCAATAATTATCTTT
GATTGTTTGCTCCCCTCTCTGGCTTTTTCTTTCTTCTTCCCTATTGAGAT
ACCATATGCTTCCTTTTGGATTGTCATGGTTTCTCAAATTTGAAGAAAGA
CCCTCCTTCTTTTTATATTGCAAACTGATACCTGCAACTTATAATAAATA
ATGTCTATACTAATGCAAAAAAAATTACTTAATTTGAAAGCTTTCTTTAA
TATTGATTTTGTGCTGCACTTTCTCTCTCCCTCTCTTCATAAGGCCATGT
TAGACGCAACATTTTCTGCCAACATTTTAGAAAATTTTCTTAAGATAGGT
AAAATTTTACCATATGTGAGCTTTTAAAAATTTTATTTTTTTTTCTCACA
CTTTACCTTTTAGTTTGTCCTTACTCCAAGAACTGAAATGAAATACCAAA
AGATTAACGAAGAATTTGAAATTATGATGAAAAAGTCCTCAAATGGGGTA
AGAAGTTTTTTATGAATTACCCAAAGTAAAGTAGAAGTAAGATTTCAGTT
TGAAACTGATATCGAGAATTTTCAGCACATCTCAGATTTGATTAGCCATT
AAACACACCGAAAAAGTTTCTCCAATTTCTTCAGACTTGACAACTTTTAA
AAACTCAAGCTTTGTACCTTATTTGACTAGGAAAAATCTTTTGTGTAAAA
AGAGGACATAGAAGGTAGAAATGATGATTCTTATATCCAGGAAAATACCT
GAAGACCTGGAAATGTGTTCGGTCACAAATTGAGATTATACTAGCCAAAT
AAATAGTAGGTCTACTTAAGTTATTAACACGCTTTACAACACGTCTATTG
TTGTCTATTTTCTTAGGTAACTTCAAGTTACCCACAGATGGGATCCTTAC
CACACAATATGCCCTCTCCCCATGACGATACTGGAAAAGATATGAGATCA
ACAACTCCTTTACAAAGAGATGGTAGATTGTCTGCTAGCCCACACCCTCA
TGCACGTAAGTTGATGGTTTTACGTTAAAATAAACAAAATGAATAAAAAC
CACGTTGACCCAGCCAAAAATATACTGGTTTTTAAGCAAGTTGTTTATTT
GTTCTTTAAAAGACATACTTCCCAGTTACAAGTTTCATATAAATTTTTTT
AGCGCTTCATCATGGATTAACATCACCGCCACCACAAAACTTATCTTTAC
CAAGTCGCAGTCCACACCCAATGAACCCACCACCTCTAGGAAACACGAAT
AACAATATCAGTCGAAGTGGAACACCAAACATGAAACAAGGAGGAATGCA
AAATTCACGAGCTCAACAAAATCACACACCGAATCAACAACTGATGCATG
GAAACATGGGAAACTCTGAGTCAATGCCAAACAATATGCCTAGTCAGACC
TTTGGAGGTGGAGGAGGAGGTGGCTCAATGCAACCGCCAAGCTTGCCATC
AAATTTCCCAACGAGTTATTCAAGTTATGATGTAGATACTGGTCAAATGT
CTTATGGAGTTACCTCAATGAACAACAGCATACATTCTAGTCAAGCAATA
TCCCACAATCCAACACTGCAAAGGTATTTGCTTTCTTTATAGTTTAAAAC
AATTTTTGCTACGAATTTAATCATTTGGAACCAATACCTGTGTCCCATCC
CATGCAAGTAAATATTGCATTTAGTACTCGCACGGTCAGTTTTAACATTC
TCTTTTTCTAACATTTTTACCTTCAGGTCACACAGTTTGAACAACAACAA
ACCAAACATGAACATCAAAGTTGAGCCACCAGACCACATGAGGGGGCCGT
CCCCTTCTATTCACAACTTTCAATCTCCTAATCCATTTCATCATACTGCG
CCACCATCGCACCATAAAGACTTTAGTGACCAGAATAATATGATGTCACT
TGGTGGTGGTGGGCCTATGTCTAAGAGACAGCGTATAGAAGGCCATAATG
ATGGATGGCAGTAGCCCAGTTTAGACACTGTGTCAATGATAACGCAACAT
AATGCGGGTAAACCCACCATGCTAGCCTGACAGATAGGCTATAATCACCA
TAATTGGGTGTAGTAGCGCCATAATGAGTTAAATTATGCTTTTCACACCT
CGTTCAGAAAGATTGGATGGTTTCTTTTTTGAGTAATAGTTGGTTGGTGT
TTATTTTTGCTGCTGGAACGAAAGTGTATTATTTTCCCTTGTTCCTGTAT
AAACTTTCTTAAGAAGGCATTCAGTTAGTCTTTTTCATCATTTATAAACT
CAACCTTGTTCATATACTAAAGACAGTTAATTGACTCATTTAAGGAAAAA
AAAACTAAAATTTTCTTTCAATTTTTTAAAAATACTTTTCATTTCTTTTT
CCAATATATTTTTTTGTTGTTTTGTTCACTCGTATAATTATGTAAATAGT
TTTTCTTAAAAAAGCCAAAATTTAAGACAATGACAGTTTTTATTATTGAA
ATAAGGCGCTTTTTTAATATTTGCAAGAAATTTTATTACGGATTACTAGT
CAACTTTATCCAAATTATTTTTGGGGGTATTTCAACAAGTTAGGTGTAAC
ATAATCTTCCAAACTTTTTGTTTCTGACAGTGACGAGCTACTCTCATGTA
CCTAATACTTCAATCGTAGAAATTTTAGCGAGACTAATTTTAGCGTATAT
TAGCGAGTCAGTAAAATCTTGATTTTTTTTGGATTTATTTTAGCGAATCA
CGATTTCGATTCGGCGTGTTTTAGCGAGATTTATTTTAGCGAAAATAGGG
AAAACTCGCTAAAACGCTAAAATTAGTCTCGCTAAAATTTCTACGATTAC
AGTAGCCGTCTCCCTCCCGCTAATTAATCTTTCGAAAATTTTCCACCCAG
GACATTTTTATTGGAACCCCCTCCCCCCGCTTATTAAGTTTTGAGGTTTT
TTCCAACTTCCCCTCCCCCGGCTATTAGGTACCCGAGAGTAACCCAATTC
ATGCAATCTTTAACTCACTCCTCGGGCGAATGTCTTACTCCAAAAAATCT
CACTTAAATTAAACAAAAAATGCTTGGTTACGTCAATTTCGCATTCCCTG
AGTTTAGCAGCTTGAGAAGATTTGTTTATTTTATAATTTTTTCGTATATG
GTTCAGAGATTTGCTGCAGTTTGTTTTCTACTTTCAATGTATTTTTCTTA
GCATGATGTAGTTTTGTTTAGTCTTATTTTCAATTGCTTCATCTGATCTG
AGTGCTTGAAATATGGATTGAATTCTTGCCTTTCATGAAAATCAGATCTT
TCCTAGTTTAAGCCCACCTTATATTTTATAAATTTTTTCTTTTGAATGGT
AGTAGAATTTGTTTTGAAAATGGAGTATGAAAGCTTGTATTCATGTAAAT
AGAACACACCCTCTCTCTGAAACATACGGTTTGGAAAAAGACAAAAAGAA
GAAATGACAAAATATGACACTTTCTTTTTCATTTTCATTTTTTTTCAGGA
TTTTGTGTCTAAATAACTATACAAACCTATCCGGAC

Coding sequence (CDS) from alignment at sc0000141:118380..127765-

>TCONS_00012193 ID=TCONS_00012193|Name=TCONS_00012193|organism=Clytia hemisphaerica|type=CDS|length=8337bp|location=Sequence derived from alignment at sc0000141:118380..127765- (Clytia hemisphaerica)
GTCACACAGTTTGAACAACAACAAACCAAACATGAACATCAAAGTTGAGC
CACCAGACCACATGAGGGGGCCGTCCCCTTCTATTCACAACTTTCAATCT
CCTAATCCATTTCATCATACTGCGCCACCATCGCACCATAAAGACTTTAG
TGACCAGAATAATATGATGTCACTTGGTGGTGGTGGGCCTATGTCTAAGA
GACAGCGTATAGAAGGCCATAATGATGGATGGCAGTAGCGCTTCATCATG
GATTAACATCACCGCCACCACAAAACTTATCTTTACCAAGTCGCAGTCCA
CACCCAATGAACCCACCACCTCTAGGAAACACGAATAACAATATCAGTCG
AAGTGGAACACCAAACATGAAACAAGGAGGAATGCAAAATTCACGAGCTC
AACAAAATCACACACCGAATCAACAACTGATGCATGGAAACATGGGAAAC
TCTGAGTCAATGCCAAACAATATGCCTAGTCAGACCTTTGGAGGTGGAGG
AGGAGGTGGCTCAATGCAACCGCCAAGCTTGCCATCAAATTTCCCAACGA
GTTATTCAAGTTATGATGTAGATACTGGTCAAATGTCTTATGGAGTTACC
TCAATGAACAACAGCATACATTCTAGTCAAGCAATATCCCACAATCCAAC
ACTGCAAAGGTAACTTCAAGTTACCCACAGATGGGATCCTTACCACACAA
TATGCCCTCTCCCCATGACGATACTGGAAAAGATATGAGATCAACAACTC
CTTTACAAAGAGATGGTAGATTGTCTGCTAGCCCACACCCTCATGCACTT
TGTCCTTACTCCAAGAACTGAAATGAAATACCAAAAGATTAACGAAGAAT
TTGAAATTATGATGAAAAAGTCCTCAAATGGGACAATTTCAAGAAAAGAA
AACAAGAATTGTGGATCTCCAGATGATGACTCTGTCACCTTCACTAAAAG
GAAATTTGGTCTGATGAAGAAGGCTTATGAACTAAGCATCCTGTGTGATT
GTGAAATTGCCTTGATTATCTTCAACTCCAGTAACAAGTTATTCCAATAT
GCAAGCACAGACATGGATAAGATTTTGCTGAAATATACAGAATACAATGA
ACCACACGAAAGTAGAACAAATGCAGATATTCACGAGATGGGTCGAAAGA
AAATCCAAATCTCTCGAATCAACGATGAAAGGAACCGTCAGGTCACACAG
TTTGAACAACAACAAACCAAACATGAACATCAAAGTTGAGCCACCAGACC
ACATGAGGGGGCCGTCCCCTTCTATTCACAACTTTCAATCTCCTAATCCA
TTTCATCATACTGCGCCACCATCGCACCATAAAGACTTTAGTGACCAGAA
TAATATGATGTCACTTGGTGGTGGTGGGCCTATGTCTAAGAGACAGCGTA
TAGAAGGCCATAATGATGGATGGCAGTAGCGCTTCATCATGGATTAACAT
CACCGCCACCACAAAACTTATCTTTACCAAGTCGCAGTCCACACCCAATG
AACCCACCACCTCTAGGAAACACGAATAACAATATCAGTCGAAGTGGAAC
ACCAAACATGAAACAAGGAGGAATGCAAAATTCACGAGCTCAACAAAATC
ACACACCGAATCAACAACTGATGCATGGAAACATGGGAAACTCTGAGTCA
ATGCCAAACAATATGCCTAGTCAGACCTTTGGAGGTGGAGGAGGAGGTGG
CTCAATGCAACCGCCAAGCTTGCCATCAAATTTCCCAACGAGTTATTCAA
GTTATGATGTAGATACTGGTCAAATGTCTTATGGAGTTACCTCAATGAAC
AACAGCATACATTCTAGTCAAGCAATATCCCACAATCCAACACTGCAAAG
GTAACTTCAAGTTACCCACAGATGGGATCCTTACCACACAATATGCCCTC
TCCCCATGACGATACTGGAAAAGATATGAGATCAACAACTCCTTTACAAA
GAGATGGTAGATTGTCTGCTAGCCCACACCCTCATGCACTTTGTCCTTAC
TCCAAGAACTGAAATGAAATACCAAAAGATTAACGAAGAATTTGAAATTA
TGATGAAAAAGTCCTCAAATGGGACAATTTCAAGAAAAGAAAACAAGAAT
TGTGGATCTCCAGATGATGACTCTGTCACCTTCACTAAAAGGAAATTTGG
TCTGATGAAGAAGGCTTATGAACTAAGCATCCTGTGTGATTGTGAAATTG
CCTTGATTATCTTCAACTCCAGTAACAAGTTATTCCAATATGCAAGCACA
GACATGGATAAGATTTTGCTGAAATATACAGAATACAATGAACCACACGA
AAGTAGAACAAATGCAGATATTCACGAGATGGGTCGAAAGAAAATCCAAA
TCTCTCGAATCAACGATGAAAGGAACCGTCAGGTCACACAGTTTGAACAA
CAACAAACCAAACATGAACATCAAAGTTGAGCCACCAGACCACATGAGGG
GGCCGTCCCCTTCTATTCACAACTTTCAATCTCCTAATCCATTTCATCAT
ACTGCGCCACCATCGCACCATAAAGACTTTAGTGACCAGAATAATATGAT
GTCACTTGGTGGTGGTGGGCCTATGTCTAAGAGACAGCGTATAGAAGGCC
ATAATGATGGATGGCAGTAGCGCTTCATCATGGATTAACATCACCGCCAC
CACAAAACTTATCTTTACCAAGTCGCAGTCCACACCCAATGAACCCACCA
CCTCTAGGAAACACGAATAACAATATCAGTCGAAGTGGAACACCAAACAT
GAAACAAGGAGGAATGCAAAATTCACGAGCTCAACAAAATCACACACCGA
ATCAACAACTGATGCATGGAAACATGGGAAACTCTGAGTCAATGCCAAAC
AATATGCCTAGTCAGACCTTTGGAGGTGGAGGAGGAGGTGGCTCAATGCA
ACCGCCAAGCTTGCCATCAAATTTCCCAACGAGTTATTCAAGTTATGATG
TAGATACTGGTCAAATGTCTTATGGAGTTACCTCAATGAACAACAGCATA
CATTCTAGTCAAGCAATATCCCACAATCCAACACTGCAAAGGTAACTTCA
AGTTACCCACAGATGGGATCCTTACCACACAATATGCCCTCTCCCCATGA
CGATACTGGAAAAGATATGAGATCAACAACTCCTTTACAAAGAGATGGTA
GATTGTCTGCTAGCCCACACCCTCATGCACTTTGTCCTTACTCCAAGAAC
TGAAATGAAATACCAAAAGATTAACGAAGAATTTGAAATTATGATGAAAA
AGTCCTCAAATGGGACAATTTCAAGAAAAGAAAACAAGAATTGTGGATCT
CCAGATGATGACTCTGTCACCTTCACTAAAAGGAAATTTGGTCTGATGAA
GAAGGCTTATGAACTAAGCATCCTGTGTGATTGTGAAATTGCCTTGATTA
TCTTCAACTCCAGTAACAAGTTATTCCAATATGCAAGCACAGACATGGAT
AAGATTTTGCTGAAATATACAGAATACAATGAACCACACGAAAGTAGAAC
AAATGCAGATATTCACGAGATGGGTCGAAAGAAAATCCAAATCTCTCGAA
TCAACGATGAAAGGAACCGTCAGGTCACACAGTTTGAACAACAACAAACC
AAACATGAACATCAAAGTTGAGCCACCAGACCACATGAGGGGGCCGTCCC
CTTCTATTCACAACTTTCAATCTCCTAATCCATTTCATCATACTGCGCCA
CCATCGCACCATAAAGACTTTAGTGACCAGAATAATATGATGTCACTTGG
TGGTGGTGGGCCTATGTCTAAGAGACAGCGTATAGAAGGCCATAATGATG
GATGGCAGTAGCGCTTCATCATGGATTAACATCACCGCCACCACAAAACT
TATCTTTACCAAGTCGCAGTCCACACCCAATGAACCCACCACCTCTAGGA
AACACGAATAACAATATCAGTCGAAGTGGAACACCAAACATGAAACAAGG
AGGAATGCAAAATTCACGAGCTCAACAAAATCACACACCGAATCAACAAC
TGATGCATGGAAACATGGGAAACTCTGAGTCAATGCCAAACAATATGCCT
AGTCAGACCTTTGGAGGTGGAGGAGGAGGTGGCTCAATGCAACCGCCAAG
CTTGCCATCAAATTTCCCAACGAGTTATTCAAGTTATGATGTAGATACTG
GTCAAATGTCTTATGGAGTTACCTCAATGAACAACAGCATACATTCTAGT
CAAGCAATATCCCACAATCCAACACTGCAAAGGTAACTTCAAGTTACCCA
CAGATGGGATCCTTACCACACAATATGCCCTCTCCCCATGACGATACTGG
AAAAGATATGAGATCAACAACTCCTTTACAAAGAGATGGTAGATTGTCTG
CTAGCCCACACCCTCATGCACTTTGTCCTTACTCCAAGAACTGAAATGAA
ATACCAAAAGATTAACGAAGAATTTGAAATTATGATGAAAAAGTCCTCAA
ATGGGACAATTTCAAGAAAAGAAAACAAGAATTGTGGATCTCCAGATGAT
GACTCTGTCACCTTCACTAAAAGGAAATTTGGTCTGATGAAGAAGGCTTA
TGAACTAAGCATCCTGTGTGATTGTGAAATTGCCTTGATTATCTTCAACT
CCAGTAACAAGTTATTCCAATATGCAAGCACAGACATGGATAAGATTTTG
CTGAAATATACAGAATACAATGAACCACACGAAAGTAGAACAAATGCAGA
TATTCACGAGATGGGTCGAAAGAAAATCCAAATCTCTCGAATCAACGATG
AAAGGAACCGTCAGGTCACACAGTTTGAACAACAACAAACCAAACATGAA
CATCAAAGTTGAGCCACCAGACCACATGAGGGGGCCGTCCCCTTCTATTC
ACAACTTTCAATCTCCTAATCCATTTCATCATACTGCGCCACCATCGCAC
CATAAAGACTTTAGTGACCAGAATAATATGATGTCACTTGGTGGTGGTGG
GCCTATGTCTAAGAGACAGCGTATAGAAGGCCATAATGATGGATGGCAGT
AGCGCTTCATCATGGATTAACATCACCGCCACCACAAAACTTATCTTTAC
CAAGTCGCAGTCCACACCCAATGAACCCACCACCTCTAGGAAACACGAAT
AACAATATCAGTCGAAGTGGAACACCAAACATGAAACAAGGAGGAATGCA
AAATTCACGAGCTCAACAAAATCACACACCGAATCAACAACTGATGCATG
GAAACATGGGAAACTCTGAGTCAATGCCAAACAATATGCCTAGTCAGACC
TTTGGAGGTGGAGGAGGAGGTGGCTCAATGCAACCGCCAAGCTTGCCATC
AAATTTCCCAACGAGTTATTCAAGTTATGATGTAGATACTGGTCAAATGT
CTTATGGAGTTACCTCAATGAACAACAGCATACATTCTAGTCAAGCAATA
TCCCACAATCCAACACTGCAAAGGTAACTTCAAGTTACCCACAGATGGGA
TCCTTACCACACAATATGCCCTCTCCCCATGACGATACTGGAAAAGATAT
GAGATCAACAACTCCTTTACAAAGAGATGGTAGATTGTCTGCTAGCCCAC
ACCCTCATGCACTTTGTCCTTACTCCAAGAACTGAAATGAAATACCAAAA
GATTAACGAAGAATTTGAAATTATGATGAAAAAGTCCTCAAATGGGACAA
TTTCAAGAAAAGAAAACAAGAATTGTGGATCTCCAGATGATGACTCTGTC
ACCTTCACTAAAAGGAAATTTGGTCTGATGAAGAAGGCTTATGAACTAAG
CATCCTGTGTGATTGTGAAATTGCCTTGATTATCTTCAACTCCAGTAACA
AGTTATTCCAATATGCAAGCACAGACATGGATAAGATTTTGCTGAAATAT
ACAGAATACAATGAACCACACGAAAGTAGAACAAATGCAGATATTCACGA
GATGGGTCGAAAGAAAATCCAAATCTCTCGAATCAACGATGAAAGGAACC
GTCAGGTCACACAGTTTGAACAACAACAAACCAAACATGAACATCAAAGT
TGAGCCACCAGACCACATGAGGGGGCCGTCCCCTTCTATTCACAACTTTC
AATCTCCTAATCCATTTCATCATACTGCGCCACCATCGCACCATAAAGAC
TTTAGTGACCAGAATAATATGATGTCACTTGGTGGTGGTGGGCCTATGTC
TAAGAGACAGCGTATAGAAGGCCATAATGATGGATGGCAGTAGCGCTTCA
TCATGGATTAACATCACCGCCACCACAAAACTTATCTTTACCAAGTCGCA
GTCCACACCCAATGAACCCACCACCTCTAGGAAACACGAATAACAATATC
AGTCGAAGTGGAACACCAAACATGAAACAAGGAGGAATGCAAAATTCACG
AGCTCAACAAAATCACACACCGAATCAACAACTGATGCATGGAAACATGG
GAAACTCTGAGTCAATGCCAAACAATATGCCTAGTCAGACCTTTGGAGGT
GGAGGAGGAGGTGGCTCAATGCAACCGCCAAGCTTGCCATCAAATTTCCC
AACGAGTTATTCAAGTTATGATGTAGATACTGGTCAAATGTCTTATGGAG
TTACCTCAATGAACAACAGCATACATTCTAGTCAAGCAATATCCCACAAT
CCAACACTGCAAAGGTAACTTCAAGTTACCCACAGATGGGATCCTTACCA
CACAATATGCCCTCTCCCCATGACGATACTGGAAAAGATATGAGATCAAC
AACTCCTTTACAAAGAGATGGTAGATTGTCTGCTAGCCCACACCCTCATG
CACTTTGTCCTTACTCCAAGAACTGAAATGAAATACCAAAAGATTAACGA
AGAATTTGAAATTATGATGAAAAAGTCCTCAAATGGGACAATTTCAAGAA
AAGAAAACAAGAATTGTGGATCTCCAGATGATGACTCTGTCACCTTCACT
AAAAGGAAATTTGGTCTGATGAAGAAGGCTTATGAACTAAGCATCCTGTG
TGATTGTGAAATTGCCTTGATTATCTTCAACTCCAGTAACAAGTTATTCC
AATATGCAAGCACAGACATGGATAAGATTTTGCTGAAATATACAGAATAC
AATGAACCACACGAAAGTAGAACAAATGCAGATATTCACGAGATGGGTCG
AAAGAAAATCCAAATCTCTCGAATCAACGATGAAAGGAACCGTCAGGTCA
CACAGTTTGAACAACAACAAACCAAACATGAACATCAAAGTTGAGCCACC
AGACCACATGAGGGGGCCGTCCCCTTCTATTCACAACTTTCAATCTCCTA
ATCCATTTCATCATACTGCGCCACCATCGCACCATAAAGACTTTAGTGAC
CAGAATAATATGATGTCACTTGGTGGTGGTGGGCCTATGTCTAAGAGACA
GCGTATAGAAGGCCATAATGATGGATGGCAGTAGCGCTTCATCATGGATT
AACATCACCGCCACCACAAAACTTATCTTTACCAAGTCGCAGTCCACACC
CAATGAACCCACCACCTCTAGGAAACACGAATAACAATATCAGTCGAAGT
GGAACACCAAACATGAAACAAGGAGGAATGCAAAATTCACGAGCTCAACA
AAATCACACACCGAATCAACAACTGATGCATGGAAACATGGGAAACTCTG
AGTCAATGCCAAACAATATGCCTAGTCAGACCTTTGGAGGTGGAGGAGGA
GGTGGCTCAATGCAACCGCCAAGCTTGCCATCAAATTTCCCAACGAGTTA
TTCAAGTTATGATGTAGATACTGGTCAAATGTCTTATGGAGTTACCTCAA
TGAACAACAGCATACATTCTAGTCAAGCAATATCCCACAATCCAACACTG
CAAAGGTAACTTCAAGTTACCCACAGATGGGATCCTTACCACACAATATG
CCCTCTCCCCATGACGATACTGGAAAAGATATGAGATCAACAACTCCTTT
ACAAAGAGATGGTAGATTGTCTGCTAGCCCACACCCTCATGCACTTTGTC
CTTACTCCAAGAACTGAAATGAAATACCAAAAGATTAACGAAGAATTTGA
AATTATGATGAAAAAGTCCTCAAATGGGACAATTTCAAGAAAAGAAAACA
AGAATTGTGGATCTCCAGATGATGACTCTGTCACCTTCACTAAAAGGAAA
TTTGGTCTGATGAAGAAGGCTTATGAACTAAGCATCCTGTGTGATTGTGA
AATTGCCTTGATTATCTTCAACTCCAGTAACAAGTTATTCCAATATGCAA
GCACAGACATGGATAAGATTTTGCTGAAATATACAGAATACAATGAACCA
CACGAAAGTAGAACAAATGCAGATATTCACGAGATGGGTCGAAAGAAAAT
CCAAATCTCTCGAATCAACGATGAAAGGAACCGTCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006861XLOC_006861Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012193-proteinTCONS_00012193-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012193-exon-sc0000141-1575043694:127669..127765TCONS_00012193-exon-sc0000141-1575043694:127669..127765Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1575043694:126969..127169TCONS_00012193-exon-sc0000141-1575043694:126969..127169Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1575043694:122616..122819TCONS_00012193-exon-sc0000141-1575043694:122616..122819Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1575043694:121994..122044TCONS_00012193-exon-sc0000141-1575043694:121994..122044Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1575043694:121369..121452TCONS_00012193-exon-sc0000141-1575043694:121369..121452Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1575043694:120861..120999TCONS_00012193-exon-sc0000141-1575043694:120861..120999Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1575043694:120293..120713TCONS_00012193-exon-sc0000141-1575043694:120293..120713Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1575043694:118380..120139TCONS_00012193-exon-sc0000141-1575043694:118380..120139Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1510915933:127669..127765TCONS_00012193-exon-sc0000141-1510915933:127669..127765Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1510915933:126969..127169TCONS_00012193-exon-sc0000141-1510915933:126969..127169Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1510915933:122616..122819TCONS_00012193-exon-sc0000141-1510915933:122616..122819Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1510915933:121994..122044TCONS_00012193-exon-sc0000141-1510915933:121994..122044Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1510915933:121369..121452TCONS_00012193-exon-sc0000141-1510915933:121369..121452Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1510915933:120861..120999TCONS_00012193-exon-sc0000141-1510915933:120861..120999Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1510915933:120293..120713TCONS_00012193-exon-sc0000141-1510915933:120293..120713Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1510915933:118380..120139TCONS_00012193-exon-sc0000141-1510915933:118380..120139Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1491911889:127669..127765TCONS_00012193-exon-sc0000141-1491911889:127669..127765Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1491911889:126969..127169TCONS_00012193-exon-sc0000141-1491911889:126969..127169Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1491911889:122616..122819TCONS_00012193-exon-sc0000141-1491911889:122616..122819Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1491911889:121994..122044TCONS_00012193-exon-sc0000141-1491911889:121994..122044Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1491911889:121369..121452TCONS_00012193-exon-sc0000141-1491911889:121369..121452Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1491911889:120861..120999TCONS_00012193-exon-sc0000141-1491911889:120861..120999Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1491911889:120293..120713TCONS_00012193-exon-sc0000141-1491911889:120293..120713Clytia hemisphaericaexon
TCONS_00012193-exon-sc0000141-1491911889:118380..120139TCONS_00012193-exon-sc0000141-1491911889:118380..120139Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000141supercontigsc0000141:118380..127765 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.889497	0	0	0.012581	3.25773	4.10846	22.6603	4.96638	1.88095	4.07344e-08	2.42548	1.01666	7.0833	1.09507	1.96321	3.1041	2.38159	4.76518	2.90206	1.90734	5.41194	5.41826	3.6549	4.57369	0.125964	0.268147	1.16245	1.93064e-09	1.13173	2.37306
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR022102HJURP_C
IPR033896MADS_MEF2-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription from RNA polymerase II promoter
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
Blast
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BLAST of TCONS_00012193 vs. Swiss-Prot (Human)
Match: MEF2A (Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.443e-64
Identity = 104/127 (81.89%), Postives = 117/127 (92.13%), Query Frame = 2 
Query:  245 MGRKKIQISRINDERNRQVTFTKRKFGLMKKAYELSILCDCEIALIIFNSSNKLFQYASTDMDKILLKYTEYNEPHESRTNADIHETISRKENKNCGSPD-DDSFVLTPRTEMKYQKINEEFEIMMK 622
            MGRKKIQI+RI DERNRQVTFTKRKFGLMKKAYELS+LCDCEIALIIFNSSNKLFQYASTDMDK+LLKYTEYNEPHESRTN+DI E +++KE++ C SPD D S+VLTP TE KY+KINEEF+ MM+
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKEHRGCDSPDPDTSYVLTPHTEEKYKKINEEFDNMMR 127
The following BLAST results are available for this feature:
BLAST of TCONS_00012193 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEF2A3.443e-6481.89Myocyte-specific enhancer factor 2A OS=Homo sapien... [more]
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