TCONS_00012254 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012254
Unique NameTCONS_00012254
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2135

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012254 ID=TCONS_00012254|Name=TCONS_00012254|organism=Clytia hemisphaerica|type=transcript|length=2135bp
aattagAAGATATAAACGGTAGATGTGATAAGAATGATAATAATCCGGAA
AGTAAAAATGGAACATGAAAATGAGAATTACCTTCGataattggagaatt
agagtTAATGTTGTATGCCATGTTGCCTGGAGCCTTGTTAGAGTTGAAAA
AGTCCAGTATGTCAGAAAATGGTGTAGAAATTATACACATTCCAGATGAT
AAAGAGAATGtattaaaatccaaaaaagctgCCACTGTAAATAATAACAA
CataattccaaaaaatgaaaagaatacaGAGAAAACAAAACAAGCAGggg
AAAATTTGTTGAGTCCTCCAAGGAAAAAGCTAAAGCAAGaaTCATTACCT
TTTCCTGTCATTCCAAAAGATGAAGCACTTGAAAAGTTGAATAATTCCAT
TGCAGAAGAAAAAGCTGCACAAGTCAATGAAAATGTTACAAAAGTAAATG
GAGTGGAGAGTAATTGCACAAAAGAGAATGAAAGCAAAGAACCATCAACC
GACAAAAAATCTACTACTCCAAACCCCATTAAGAAAACAGCGaaatcacC
TGGTCTATCAAAAGAGGAAAAGGAGAGACAACGTTTGGAACGTGAACAAC
TGAAACTGGAAAAACAGAAAGAAATGGAAGAGAAGAAACGCTTAAAAGAG
GAGGAAAAGAAGAAACGAGAAGAAGAGAGATTACAGAAACAAGcagagaa
agaaaagaaagagcatgaacggaaaattgaaaaagaaaagaaggaacaag
aacgaaaagaaaaagaaaaGTTAAAAGAAGAAGACcgtaaaaagaaagaa
gaagaaaagaagaaacgaGATGAACAACGCGAGAATGAGAGACGTGAAAA
AGAAGCAGAACGAGAAAAGAAAGAACAGGAAAAGAAAATGgaagaagaga
aaaagaagatgaaagaaGAAGCAGAGaaaaagaagaaggagaaaGCTGCC
AACCAATTCAAAAGTTTCTTTACCAAGAAAACTACTGAAAAGaaaACAGT
CGAAAAGCCAGCGAAAATTTCACGGTTCGCAAACTTTCAAGTTACTCCGA
ATATGACACTGGCGCCATGTGTTCGAGTGAGGAATTtcgataaatccaaa
attgatAGTTTCTTGGAAAAGGATATTGCCGACTTTTCGTCATATCTCGA
AGAACTTGCCATCAAGATCGCAAATAACCAACTTTCACCCTGTGTCACGC
GTCGAAAACTTCgtaaagaagaagaaacaaaacgTAAAACCGAATTCGAA
ACGAAAACAGCTCAAAATACCGAAAAGAAAGACTTCGAACCGAAAACGAA
ACGTCGGAAATCGTCGTCGGGGCTCGACCAATCAATGAATAGCACCGACT
GCGTAATCATTAACGACGATAGTAATTCTAACGACAATTCGAGCGACGAC
GAGGACGACAATGAAACGAGTTTTGTTGAAGATAAACAACTGATGAAAGC
TATTTATTTGAAATTCGATGAAAACACGAGACCACCTTACTATGGTACTT
GGAGaaagaaatcgaaaaatatTTCCGGACGAAAACCATTCGGACAAGAT
ACTGAGATTTTCAATTACGATGTTGACAGTGATGAAGAATGGATTGATGA
GCCTGGTGAAGATTGCTCTGATAATGTAAGTTCTTTTTggacctaccttg
gaggtcctataaattaacccatgttcgtccgtccgtccgtctgttaccag
cttttctcaggattggctcattaattttttctgatttttggcacaatgat
gcaaaatggcaatgcccaaaatgtgacggagcccgattttcggaaaaaaa
ttttttccggccgaaaatgccggatatattccggaaaaactggttttttg
gcactttctcgagattttatcattagttttttctgattttttgctcaaag
atgcgtattaacaatgcccaaaacatggtcgagtccgatttttgaaaaaa
aaaattttccggccgaaaatgccagaaatatgccggaaattgtcgttttt
ctggattttcattgggcttttttccttataattggttgtattttcattta
aaaacattattaatagcaatgcccaccatcaagcatgtttcaattttcaa
taaaattgatttttgaagctggaactattcaaaaa
Run BLAST on NCBI

transcript from alignment at sc0000143:107978..124146+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012254 ID=TCONS_00012254|Name=TCONS_00012254|organism=Clytia hemisphaerica|type=transcript|length=16169bp|location=Sequence derived from alignment at sc0000143:107978..124146+ (Clytia hemisphaerica)
aattagAAGATATAAACGGTAGATGTGATAAGAATGATAATAATCCGGAA
AGTAAAAATGGAACATGAAAATGAGAATTACCTTCGataattggagaatt
agagtTAATGTTGTATGCCATGTTGCCTGGAGCCTTGTTAGAGTTGAAAA
AGGTAAGTTTCACTCACGTTTTTGATTTAGAAGGTGTAGGGTCGTCGGGA
AAACGGCCGTAGTTTCTCATCTattgttatttctttttttatgttgTTGA
GTTTGATTGACGTTTTTTTGTGCGGGGCGAAATAAATAAGTGCATGGCGT
GCAGGCGTGTTAGAAGGGAGGGCGTAGTATATACTCCGTTTGATTGACGT
ATTATGTGAGGGTGGTGGTGTCCTGAAAGGCGTGCTGAATTGGTTTGGCA
AATTCTAAATGTTAGTTAGAATAGGGTTAACTTTatgaaatagggtgttt
ttgaaaTGACTTTGTTCGAAATAGGGTGTTGTTGAAATGATAGGTCATAG
TTTGGTTCCTTTTTCTCCGTTTTATTATTTTACTCTTTAAGTAGAATGTG
TCTAATCTTTACAGTCACTCTAATTACAAAGGTAATATAAAGATAGTATT
AATAtagaaagaatataaatataaaacTAGCAGgtctaaaaataatttaa
aataaagtgaaaatccgtaaaatttgGATTTATGCTCGTTAAATTCTAGA
TTTATGTTCATTTATGTTCTGATTTTTGTTTATGATCTGAATTTTGCTCT
CACTAAATGctctttgatatttttgtgtCTTTTGNTTATGCTCGTTAAAT
TCTAGATTTATGCTCATTTATGTTCTGAATTTTGTTTATGATCTATATAT
AACAAATGGTGTTCCTGGTAATATTTGTTTCAGTTCCGGATCCTCCTGTA
CTATTCCCCAATGCTTCCTTAATATGTTTTGCAAGGGTTTTAGGTGTTCG
TAGTATTCCACAACGTATGGGAGTATGTTCTTTTTACGTAATGTTCGGGA
ACCAAATGTTTGTTTATTGTATAGACATTTCTTTTGGGTTAATCCTCTgg
tcttttttatatttctatCGATGATTTTGCTTGAGTAACCTCGGGAGAGG
AGGATCCTCTTTAAAGATTGTAATTCTTTCTTTAAGATAGTGTTGTCCTT
TGTAAGTAGTCTGTATCTTAATGCCTGGGTATAGATAATGTTGGTCTTGG
TGTGGGGTGGGTGGTATGAAGAGTAGTGGAGGAGCATTTTTGCATCAGTT
GGTTTTGTGTAAAGTTTACTTTTAAAACCCCCTCTTTGTCAATGTATATC
GTAGTATCAAGGAAGTTTGCCTCTTGTTTTGAGTATTCCCATGTAAATTT
TATTGTTGGATGTATATTATTCAAATGATTAAGAAAGTATTTTAGATGTT
TTGTAAACATGGCaattgtccgttagtcacgaaatagatttaaaattcaG
AGTTCGGAGAATAAAATAGACGGCACTCGCTTAAAAAACCatgtattttg
ttcttattaaagctattttgacTATATTTACCCATTTTACCCATAGATAT
ATGTTAAATAGTCAATCCTTTCTTTGTGTATGCATTTCACattttcgtga
ctaacggactaGTTGTCATAATAGGGAGAATAATCCTTTtccaaagtaaa
taaataaaataccctTACCCAATTTGTCTGTCTTTGTCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCTTTGTCCTGATTCAACAAAGAAACAATGCAGTGCAAAAAACACCCA
TAAAAACTCAACAGatctttatatttcaaaattttcaaattttcgggaTC
TATATGAACTTGACAGGAATGGTACCACACAgagaaaaatgagaattctt
ctattcttttaggcttttgtTATTCTATTGATATAACATTTCACCCCTGA
AGCACCAAATATAGGAATGGTTGGATTGCCTCGTCAGAATCattaaaaaa
ccgttttttccgTTAGTCACGTTTTtaaatgtccgttagtcacagcattt
tttgcccaatttttgtcatattttctgactttgacatttttttttcaaaa
ttaattttgaaacataaaattcaacctttcctctagtgaatttaagcaaa
aaacccaAACTGTAGCTTTAGGAACAGCACTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAACC
TTAGGTTACTCCGAGTCCACTGGTTCTCTGAACTATTCTTCGTGTGTTTC
CCTTCCGTTTTCTCATTCACTGACTACTAAACTAATTAGGGAAATATTAC
CTTACTTATTTTTATCAGCacataccgtgagaggtcctaaagccgacagc
ccagcctaaagccgatggggtctttcaaagatacaaactaaaataaaaaa
aacctttcgctgtgacgcaacgaagataccaaagtgtcaactaaactgag
agatttgatgcactgaaccaattgaaccaaatagcaataattgcttctta
taacaaaacatatttttttattgcaatatgcacaacgtcataactgacaa
cagtagtaacagcatcataaaaagtaacgagatgttttgatgttccaaag
cacacgaaaatataaaagaggtttgtgtacgagcgtgcttattttgaaac
gttacgtaatcaagcctggtttctattactttacactggcacttggcttg
attgcggggctaggactttgtgtaaggatacatatagacgacgtatatta
cattatattatatattacatgataagaatacaaatagacgacgtatatta
caattatcAGTGCGCCAcaaaccgcgatatttcgagaacacggaagcgcg
tcaaaacaccagcttttttagagttttgtctcgtttatccaaacgcttca
atctcgggTAGGCTTAgtggtcaagactagaacccccaatacgagacatt
tgcctaaccgaaaaaaaatcatcatcatcaattttgttaattttcagaat
cgtttactcactggaaatacgcaactttctgaagttttgtNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNtgacttgacaatggagaaccaaatttggcaatgcataattattacgag
cggccgagaaagtttgtgtgacgcaaaaattgcgcgataaacgaagctCT
AGAAAAACGACCACTGAAAATTggaactaggaatttattgaatatttcac
tgatgaagtatcaaactttttgttttttgtaattattataaattcataat
ttttaaatactattttttgaaagtcaatggacaattaaagtgaatttaag
ctgattgggtggatattgggcggacgggcgttttgcacgttccgagatcg
gaaattgaacgagagtaaaaaacgggggcgtcttagtaatagtaattcat
tattttattttttttttcgcgaatgaaaatgaatttttgatttttgaatt
aaggatataataatataatatattatatttgattgtcaatgccaaaagat
agtTCTTTACTTtgcgaataatctgctgtgttgctttgCCACTttccccc
ggattgttttagtagacacttcggtcacgtaaataaaaacacgtgtatat
gtggAAGCCGACTgtgtggactgaccgaaattgcaatttacataaattat
tgtggaagtgaacgctttagaggaatgtttgggaaatcaaaaagaccact
tttgtgagaatgttgaNNNNNNNNNNNNNNNNNNNNNNNNtgttttgttt
cgagagttctagcaatagtttatcgttcaacttggagagggaatgtttgt
aaacatagaattttttttcacaacagttatttggggggtcggaattaggc
tgggctgtcggctttaggacctctcacggtagtATTATTAGTACATAACT
TGAGCTAACATTTTATTTGCATCGTCAAAAGAGACATATACATACTTTAT
CTGTCACCCTGTATATATTCAACAGTAAAGTATAAACCGGTAAATatatt
tatctatctatctatctatctatctgtGTATAAAAAACACAACAGAAATT
TTATCtgatctgttttttttttcactagCTACACCTAGCTACAGGCCCCG
CAAAATGACCGTAAAAGagggggaggctgaaggctcaaagaGATGAAATT
CGCCAGACATTTGAGGAAAagaatctcatttgctcaaaagtggggaggct
gaagctGTCTCCCCAGCACACAGTACAGTCGCCAGTCGCAGTCTCCCCAG
CTTCCATCAGGCGCGGCCTGAGCTACACTTAACTTAGTCTCTTTGTTACG
TTAAGTCTGTTAAAGGTGTGAGGGAAATGAGGATTCCAAGGTAaaaattt
tagtattttctttCTATTCATATCATGATTATACCAtcaccctaaaaata
ttttgtcaaaaaaagatCCCTATCTAAAGTTAACAGCTTAAAACTCACTT
TCCGTAACCCCTCGCAGACAAAAACGCATTAgacggtcatcgaaaaattg
ttctattcgcgttaCCCGCccacatcaaattttccgctgattttccggtg
cggagatgcggaaaaaaatgcggaaaagcaatttgttcttttaaagtata
gcttttttctcaattgctctgacgatcatcgaaaaatttttttgctcgcg
ttactacccgcccctgagttactggcgtaattaaaaaaaaacccagGAAT
GTTTTAGAGCacccgtccgcccgcatgcatttttaacacccgttgcgacg
cgaacagagcattttttcgatgaccgccttacctcccaaacaatttcaTA
CACAACAGTGTCCGAGTGCACATTTTCCCAGGCAGTTTCCGAGACGTTTG
AACAGGTGAATTGTCTTTAAAATTCCCGTACTTCCTGTACGAACCTACGG
TTCTCAGTCAGGAgtaataccttaaacaaggCGTATACCTTGTTCAAGTA
AGAATTCCAAAATTAGTGGGAGTATTTCCCAAACTAGGAAAAAGGGCACT
CTCTCGTCTATACCATAGGAAAGAGCACGAAAAACTGAATTCCCAtggtg
atttttagaaaattccacAGCCGGAATTGATCACAATCTTCAATTTTGAA
ACAACCTTAAAGTCCAGTCTAAATGAAACGaaaatcagcttttttaaaGG
GTGTAGGAAGAGCTTTAcacataaaatacaaaacaatttAAATGGTACCC
AACgttttttcaagaaatctttaaaaatacctTGAACAAGGTACCCCTAC
CTTGAACAATATGCAtgtaccttgtttaaggtaaatcaccttgtttaagg
tattaTTAACTATTCTTCTTTGCTTCGTGTCTTCGTCCCCTGAATTTATG
GTACCAAACCTAGTTCCAAAGAtaaaacaaagataaaaaaagattCCGTC
TgtagattttgataattttttcactacttaGTCAATCAAAGACTCCTTTT
TCCTATGTGCTAAAATTCAAGATGCCCTTTTTCCTATACCACttttaaaa
tcaactttttttcaggaaatcttaaaaaatacaAGGTATACGccttgttt
aaggtattacTCCTGACTGGTTTTGGATGAGAGGAGGACAGAGAGGCCAG
GTTGTTATTATTAATTTTGGAGGTGAAAATCCCAAATTTTAAAGCCTGAT
CATCAACAACCCACATCTTCAGGCCAAACCATGGGTCGTGCTTTGAAAAC
cctgtgttttcatttcaaGAAATGCTGAGTCATTGATGATGCAATTTAAT
CAGCAGTGAAAGATCTGGAAAGTTCTTTTAAAGAGAAAAGCGGTCAGTGG
GTAAAACTGATAATATTGTTAATTTGTAAAACTCAAATTCCATTAACAAG
AAATTGCATAGTTTTTCTCCTGTAAAATTTGACGCTTGCATTTGAAACGA
TTTCTCAGGGTGATGAACAAGGTCTCAGGGTGATGAACTGATGAACAGGG
TTTCAATGTGCATTTTGTAGAACAACCCTACCGTAGAGTCctttaatatc
gacatgcgtcttgttatttcgacatagctgtaggctagtcttcgaaataa
aaaatcaaacataaacaaatacataccaaagttatgaatcaatcactaaa
ttgtactctccctatcacgtcacagattgttgaaaTGTAAGAAGTGTGAA
Gtggttttttttctaaaagaaaactttaacgatgtagtcactaaaaacta
attagcatgctttcattcaACAGAACGAAGatatccaaatcaaaacaaca
ttttgcacgcgaggatttttttagtagacctttttaccgtgaaccgaaaa
taataaaaagaacccggtttccttttgaatttaatgtgaccgccatactg
gccatcacggcgtgcagcctcttagcgcctagagcgtgtgtttttgataa
ataaggaaggggaaaccaggctaagcgcacaaattatttttatcacttga
cttgaagcgtaataaagttgtaagaTTTTAAtcatggacacgagaaagtt
acgaggaagtttgcatgcgttttgtGTGCTGTGTAAAGCtccttataatt
tggctgtttttttaattgaaaggattgcaatgtttattgaactagtttga
tggatgaacttgtttgataagaatgataccaagaatttcattcaaggttt
gttttgattattttacagatccggtgtcgactttagaagacgcatgtcga
tattagacaaTTCTACGGTAGTATCTTAATCTCTAGGAATTTTTCCCAAT
CAGTCTTGAAAGGCTACTTGATTCAGAATAACATTTTACCTGATTTTGCT
TGTGTTTTCAAGGATTGGTCGgcattcaaaatttcaaattttgtggAAAT
GCTGTAAAAGACTGCATCCTTGCAGAATATTGCAGCGCTAAAGAACTATT
GTCAAACTGAATTTAAGTTGGAACttttggttgaaacatgggatATTCAT
TGAATAGCAAGAATGCAATATCCCGTTTGACAGAACTTAATAAAGCTAAA
AAACATTTCCAATGAAACAAAGGCAAAAACAGGTTTGATTTCTCCCCAGC
CCAAATggtggagaaaaaaaatttgctaccATTTTGCAAAGTTGTATTGG
TAGACATCAAACTTGATAGATCTGGGTCAATGAGCAATTAATCAATTAAA
TAATACTACCCAAAATGTTCTTGCTACTTTATAAAACTTTCACTGGGGTT
GACTATTCTCTTGATGGGCGCCTTTGGAAGTTTACTGTGTTTTTAAGAGA
GCATTGATACCTCATAAGGTTACAGAGTGTACTGCTAAATTTAGCCTATT
GTACTACTCTGGCAGTGACACAAAAAAGTCTAGTCAATTAGTTTTTCTAC
CCTTCCTCTGTTTGCAATCTCTGAAAAAGGGAATTTTCATATAGTTTTTA
ACATGTTTACGATTGtctttattttttgttacaGTCCAGTATGTCAGAAA
ATGGTGTAGAAATTATACACATTCCAGATGATAAAGAGAATGtattaaaa
tccaaaaaagctgCCACTGTAAATAATAACAACataattccaaaaaatga
aaagaatacaGAGAAAACAAAACAAGCAGGTGAGCCTtgtaatatgatta
ttttgaaatttcaaaaatatcccCTGCCCCTGATAGTCTTGTTTTATACC
CCTAAATTGACTCATACATTAACAGTCTCTGCCATTAGCTTGACCAGGAA
GTCCCTGTCAGGTTGGGAAAAAAACCTCCTGAACAGAAAAGATAAGCTCA
gattttttcaggattgttgCTGCTCTTTaggaagatttgaaaaaaatact
tcatCTCATGACATGCTGTGTTATAaccagcaaaaaaaatgaaacattct
tTACAGGGCAATAAAGCATCGAGGTTTGAGAAATTTCACTGGGCCAAATA
TAGAAATCTTTCTTATTTGTCAAATATCTATTACTTATCAAATATTGAAA
CTGCCTGAGAGAGAGAGGGGGGGGGTTGCTGGAAAGTTTCAGATagattt
tcctggaaaatttttgattcgCAAATCAccatgattttcttttcattttc
aggggAAAATTTGTTGAGTCCTCCAAGGAAAAAGCTAAAGCAAGGTAAAT
TTTGAACTTTGCTAAGTTTAAAAGAAAGTTGTAGTAACAATCATCTAGCA
AGATTATCTGTACTTGTTTCAAAGATGATTATAGCcgtaatttgaaaaat
atatttatagaTTGACACTGTTAGCtgtgaaaaattaattaattatcaTT
TgataaatttcgatttttagaaTCATTACCTTTTCCTGTCATTCCAAAAG
ATGAAGCACTTGAAAAGTTGAATAATTCCATTGCAGAAGAAAAAGGTTTG
AATACATTATAGTAatttttctatttgtaaagttgttGAAAATTCTAGGT
CCTTTTTAAAAGGTCAATTTAGATAGAGTTGCTTATTGCTGAATCCTTTT
GATCTATATGTAAATTATTCTtgtaaaaatgcaattttcaatattttctg
gtGTTCTTTTCTTTCAGCTGCACAAGTCAATGAAAATGTTACAAAAGTAA
ATGGAGTGGAGAGTAATTGCACAAAAGAGAATGAAAGCAAAGAACCATCA
ACCGACAAAAAATCTACTACTCCAAACCCCATTAAGAAAACAGCGGTAAT
ATAAGTAGATTAACAAAATCTTGCTCAAATGTAGCCCATGACCGGCTCTT
TATAGAACCTAATTGTTTGATGTGAGGACTGTTATTAtattgtttttaat
gattttggtCGCCAAATTGATTAGGTCGTGGTAGTCTAATTTCACCTAAC
TTCATAAAATAACTTTAAGTTCTAAGATCAATAGTAAAAGTGTGTAACAT
TTTTATTCTTGGTAATTGAACCAGATTGAATAGAACAATTAGGTTTGGTA
AAAGGATTTTTGGATAAAGAGAGGCACATTCTTACGATAAAGATAGCAAA
ttctatattattattatattgcTATATTATTATATTCTTATTGGAAGTAA
TTTTTGTGGGAATTAGTATTAacgttttttgtgttttttttgccaaaaaa
tttgaaccagtgaaatacaatttttttcaattttatcgaaaaatcctaaa
aacccgcgaaatgcaatttttccgatttttttttcgaccgcgaataATTA
GTtcctgcaaaaattagtttcaataagGTATATTGCCAATTCTATTAATA
TTATAAATGATCAAGGCCGCAAACTTACCTACTACCTAATGAAATAAGTG
AGAAGAATGCAGGTACTCCAGGTAAATGCAAGTACTCACTAATCTTGTGA
CTTGtcctataatttttttttaattttttcagaaatcacCTGGTCTATCA
AAAGAGGAAAAGGAGAGACAACGTTTGGAACGTGAACAACTGAAACTGGA
AAAACAGAAAGAAATGGAAGAGAAGAAACGCTTAAAAGAGGAGGAAAAGA
AGAAACGAGAAGAAGAGAGATTACAGAAACAAGcagagaaagaaaagaaa
gagcatgaacggaaaattgaaaaagaaaagaaggaacaagaacgaaaaga
aaaagaaaagtatgtCATTTTTTCCCGTCCTTtaataaatcatttttgat
gCTTATTACTATTGTTACTATTGCTAATTCATCTCTTGAAATATGCAGTA
ATTTGCAGTAAGgacaaaataaattattttcttgaCTTTGCGCGCCTCCT
TTCTATATCTTAAAGATAAAACCCTTGATAAAGAAACTGGAATTCACTCT
CTTCAGGTTAAAAGAAGAAGACcgtaaaaagaaagaagaagaaaagaaga
aacgaGATGAACAACGCGAGAATGAGAGACGTGAAAAAGAAGCAGAACGA
GAAAAGAAAGAACAGGAAAAGAAAATGgaagaagagaaaaagaagatgaa
agaaGAAGCAGAGGTTCGTATTCTTAATATTCtcgacgtaatcttttata
cggaagcacccaaaaaacacctggtgttttccaccagttttgaatttaaa
caatggaGCTGgtgttttttgtgtgtttccatataaaagattacgtcttG
AATACCAAGAATAGCGATCACATTTAGTTCCTACcccccctacatttagg
ggACCCTTTCCGttttagattttcttgaaacCCAGAAACCCCTCGTCTGt
gttaaaaatttgattttccaaaaaggGAAGTTGCCAGGGGGCCAAACTAC
CTAACTCAtaaaattatgtacaaaaatttcaaattgattctttttgaaaa
aaataattttcaaaagcatcTCCTAAGGTGGGGGGAGGTCGTCCGTCCTA
AGGCCTCTAGAAAACTTATGGATCagtattgtaaaaaatgtaaaccgATA
TCATTATTATTAAGTATAGTGGACTAGCTTATTACTCGCTCCAAAGAAGC
TATCAATGTTCAGGCCCCTAATAATTCGGGCCCCTAATAATTCGGGCCCT
CTCTTTAAATCCGAAAATGTTATAGTTACTGTCTAGATTAACTGGACCCC
TTCTTTTCTACTTGTACCAATTTGTGTTTTGGAATAGACAATAAAATATG
ATAACTATCTCTTCCTAAaaatgggatgagctggagtttttacaagatac
ttcactaattggtcatttgaagtgatagagatgacgcgttctttagaaaa
agtaacaaaattgttttattactggttaacgaccaaccaaatcaaataag
agcttgtaaaaactccagcttgtcccctaAAAATGGGGGAAAAAATATTG
GCAAGAGTGATGAATTATAGTAGATTTACAAATTTTCACTTGAGTCTTGC
TGCAGTATGTCTGTCCCCAAAATTTAACCAGTGGCATTTATGTTACCctt
aaaatttcagaaaaaacattcATGTCTTAACTAATCTCAGCGAAATTCTG
TGTATAGCTTTTGTCCAACCGTATCAGGGGGGGGCTTGAAGATTCATATT
TAGCCGTTAACCAGATAATACATTTTACACAGAATTTGAATCATTGAGCT
TAAAGCCCTGAAAGGGCTAAATATGATTTTCTAGCAAGGTAAAGTGAAGC
CTGAAGATTTGCGCCGCATTGAAAATGGTGAATTTGAATCTaactctttc
tttgtttttaagcgCCATATGTTTCGAAATCTGGCGTTCTGGCGTTAGAT
TTTACAGTTAATCTGGCGTTAGATTTTACAGTTAATCTGGCGCTAGATTT
TACAGTTAATCTGGTGTTTGAGTGAAAACCACGCAAGtcacgcgttttgg
atgggaaataagtggctttatttcccatccaggtaTTTCGAATCTATCCC
TTCGGGGATTTGAAGTCAATGATTTGAATCctattttgttttagaaaaag
aagaaggagaaaGCTGCCAACCAATTCAAAAGTTTCTTTACCAAGAAAAC
TACTGAAAAGGTATACTTCGGATTACCTCAGTTGGTCTCTTAATAAAGTC
AGAGActaatattttatcaaattctttaaaaaaatgacttttcttGCATT
GTTGCAAACTATCATTATCCTTATATacatgatatgcaacactggagagt
cttctgagaactttaaaaaatttcccgaccaatacgtcacttaaacaata
gaaaaagtgacgtaatggaTGAAAAAAAACTNATCATTGAGCTTAAAGCC
CTGAAAGGGCTAAATATGATTTTCTAGCAAGGTAAAGTGAAGCCTGAAGA
TTTGCGCCGCATTGAAAATGGTGACTTTGAATCTaactctttctttgttt
ttaagcgCCATATGTTTCGAAATCTGGCGTTCTGGCGTTAGATTTTACAG
TAATCTGGCGTTAGATTTTACAGTTAATCTGGCGTTAGATTTTACAGTTA
ATCTGGCGCTAGATTTTACAGTTAATCTGGTGTTTGAGTGAAAACCACGC
AAGtcacgcgttttggatgggaaataagtggctttatttcccatccaggt
aTTTCGAATCTATCCCTTCGGGGATTTGAAGTCAATGATTTGAATCctat
tttgttttagaaaaagaagaaggagaaaGCTGCCAACCAATTCAAAAGTT
TCTTTACCAAGAAAACTACTGAAAAGGTATACTTCGGATTACCTCAGTTG
GTCTCTTAATAAAGTCAGAGActaatattttatcaaattctttaaaaaaa
tgacttttcttGCATTGTTGCAAACTATCATTATCCTTATATacatgata
tgcaacactggagagtcttctgagaactttaaaaaatttcccgaccaata
cgtcacttaaacaatagaaaaagtgacgtaatggaTGAAAAAACCCCAGA
aaattgcataatttcgtgaagtcattgcagtgatGCATACCATGAATACA
CATTCAATCACCATTGAGCAATATATCTGAATATAAcctattataataat
aataataatagtaatgGTTAGGAACAGAGTTTTTCTAAGATTCTCCTGGT
CAGTTGGAAAGTCGTGtcgattcaaaactttcttcaaTTCCAAGAAATGA
CCGGACTTTGAAGATCTGATTAGATAAAGTCAACTTTCAtggaattttta
caaaaattagaTTTATTCTTTCCTAGTTTTTAGACCACTATGTTAtcctt
attttgaatttttagaaaACAGTCGAAAAGCCAGCGAAAATTTCACGGTT
CGCAAACTTTCAAGTTACTCCGAATATGACACTGGCGCCATGTGTTCGAG
TGAGGAATTtcgataaatccaaaattgatAGTTTCTTGGAAAAGGTAAGA
TGAAACTCAATTTTCATGTCGTTTAGAGTTAATATTTTGCCAATTGAAAT
CCCTATAAAAAAGCAACTTATTCTAACAGTAACTTATTTCACCTTCTTCT
CGTGAGAGAAGGCTCCGTGAAAATTAGCACCTTTTACGGCCTTAGTATTC
CTTCACGCCCTTTAAATAAGAAAGGCCTGGGGACACACGGAGAAAAAACA
CTCACGGAGATGTAAAAACAGTAAATTCTAAAATCCTTACGGGTGTTATT
TCGGTCATTTCAATACTTattattcgatttttttaaagGATATTGCCGAC
TTTTCGTCATATCTCGAAGAACTTGCCATCAAGATCGCAAATAACCAACT
TTCACCCTGTGTCACGCGTCGAAAACTTCgtaaagaagaagaaacaaaac
gTAAAACCGAATTCGAAACGAAAACAGCTCAAAATACCGAAAAGAAAGAC
TTCGAACCGAAAACGAAACGTCGGAAATCGTCGTCGGGGCTCGACCAATC
AATGAATAGCACCGACTGCGTAATCATTAACGACGATAGTAATTCTAACG
ACAATTCGAGCGACGACGAGGACGACAATGAAACGAGTTTTGTTGAAGAT
AAACAACTGATGAAAGCTATTTATTTGAAATTCGATGAAAACACGAGACC
ACCTTACTATGGTACTTGGAGaaagaaatcgaaaaatatTTCCGGACGAA
AACCATTCGGACAAGATACTGTAAGCTTAAGCTAGATTCTATTTTCATTA
CATTATGAAAGGCTAATCCTGGCTAATCAAGATAATTTCTGTATGAGGGT
ATAGTGAAATCTCGCTAATTTATTGgaatctttttataattcgaactgaa
cctcagtccccgtcaagggcAAATGTACATAAATATCTCtgttattttgg
aaaaaattatatttccctttcaagttcgaattagcgagagtctgTATTgg
ataattatgtagtccagcagaaaaacaactgaaaaacaatgataaaacca
tgcataattattacaatatgcttgatacagtaattatgcatgactatatc
attgtttttatggctggactacataattattcaacaggacgtcctctttg
aaaaaaggtctattgctaACTAATATCGGATACCGCTCCAAGGGGCTTGG
AATAtttcgaaaacaaaattttgaaaatgtgctaCACATGCTCACCCCGT
GCACGGCCGAAAGGTTAGTGATTTCTGAACTGAGAACTTTTCATTTGACA
ATAGAATTCTCAAAATCTGCTACACATCCCCCCACCCCACCACGTACGGT
TCGAGGTTTTGTGAattgttaactttttatttgacaGGAGATTTTCAATT
ACGATGTTGACAGTGATGAAGAATGGATTGATGAGCCTGGTGAAGATTGC
TCTGATAATGTAAGTTCTTTTTggacctaccttggaggtcctataaatta
acccatgttcgtccgtccgtccgtctgttaccagcttttctcaggattgg
ctcattaattttttctgatttttggcacaatgatgcaaaatggcaatgcc
caaaatgtgacggagcccgattttcggaaaaaaattttttccggccgaaa
atgccggatatattccggaaaaactggttttttggcactttctcgagatt
ttatcattagttttttctgattttttgctcaaagatgcgtattaacaatg
cccaaaacatggtcgagtccgatttttgaaaaaaaaaattttccggccga
aaatgccagaaatatgccggaaattgtcgtttttctggattttcattggg
cttttttccttataattggttgtattttcatttaaaaacattattaatag
caatgcccaccatcaagcatgtttcaattttcaataaaattgatttttga
agctggaactattcaaaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006902XLOC_006902Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012254-exon-sc0000143-1491911889:107978..108129TCONS_00012254-exon-sc0000143-1491911889:107978..108129Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:107978..108129TCONS_00012254-exon-sc0000143-1510915933:107978..108129Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:107978..108129TCONS_00012254-exon-sc0000143-1575043694:107978..108129Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:116912..117056TCONS_00012254-exon-sc0000143-1491911889:116912..117056Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:116912..117056TCONS_00012254-exon-sc0000143-1510915933:116912..117056Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:116912..117056TCONS_00012254-exon-sc0000143-1575043694:116912..117056Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:117530..117571TCONS_00012254-exon-sc0000143-1491911889:117530..117571Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:117530..117571TCONS_00012254-exon-sc0000143-1510915933:117530..117571Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:117530..117571TCONS_00012254-exon-sc0000143-1575043694:117530..117571Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:117748..117822TCONS_00012254-exon-sc0000143-1491911889:117748..117822Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:117748..117822TCONS_00012254-exon-sc0000143-1510915933:117748..117822Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:117748..117822TCONS_00012254-exon-sc0000143-1575043694:117748..117822Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:117995..118122TCONS_00012254-exon-sc0000143-1491911889:117995..118122Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:117995..118122TCONS_00012254-exon-sc0000143-1510915933:117995..118122Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:117995..118122TCONS_00012254-exon-sc0000143-1575043694:117995..118122Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:118810..119036TCONS_00012254-exon-sc0000143-1491911889:118810..119036Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:118810..119036TCONS_00012254-exon-sc0000143-1510915933:118810..119036Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:118810..119036TCONS_00012254-exon-sc0000143-1575043694:118810..119036Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:119234..119390TCONS_00012254-exon-sc0000143-1491911889:119234..119390Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:119234..119390TCONS_00012254-exon-sc0000143-1510915933:119234..119390Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:119234..119390TCONS_00012254-exon-sc0000143-1575043694:119234..119390Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:121488..121553TCONS_00012254-exon-sc0000143-1491911889:121488..121553Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:121488..121553TCONS_00012254-exon-sc0000143-1510915933:121488..121553Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:121488..121553TCONS_00012254-exon-sc0000143-1575043694:121488..121553Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:122093..122221TCONS_00012254-exon-sc0000143-1491911889:122093..122221Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:122093..122221TCONS_00012254-exon-sc0000143-1510915933:122093..122221Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:122093..122221TCONS_00012254-exon-sc0000143-1575043694:122093..122221Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:122516..122947TCONS_00012254-exon-sc0000143-1491911889:122516..122947Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:122516..122947TCONS_00012254-exon-sc0000143-1510915933:122516..122947Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:122516..122947TCONS_00012254-exon-sc0000143-1575043694:122516..122947Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1491911889:123565..124146TCONS_00012254-exon-sc0000143-1491911889:123565..124146Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1510915933:123565..124146TCONS_00012254-exon-sc0000143-1510915933:123565..124146Clytia hemisphaericaexon
TCONS_00012254-exon-sc0000143-1575043694:123565..124146TCONS_00012254-exon-sc0000143-1575043694:123565..124146Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143supercontigsc0000143:107978..124146 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.752	13.9563	17.333	21.059	3.31226	2.32657	1.75432	1.97084	1.47372	2.78934	5.529	1.09052	0.726004	1.88491	3.25426	1.99561	1.63895	1.88986	0.290105	0	1.05544	2.70274	7.23429	8.37172	0.87902	2.09201	0	1.19809	3.93775	6.17222
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012254 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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