TCONS_00012316 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012316
Unique NameTCONS_00012316
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1187

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012316 ID=TCONS_00012316|Name=TCONS_00012316|organism=Clytia hemisphaerica|type=transcript|length=1187bp
TCAACTTATTGTGGATGTTAAAAAACTTTATATCAAATCATGTGAATATC
ATAAAAGCACTATACTAATCTACAGAGGCGTACATGGTCACAACTTTTTA
GAGTAAGATCAATGAATCAATAACATtaacacactttttaaaattatctt
tgaaaaaaattaacacaGAAATGTACAGGCATGGTTATACCAATTATACG
AGTATATCTAAGGTTTCAGAACATTAAATAATAAAGACGAGTTCATTTGT
CAAGCTTCAAACTAAGGACAATTTATCTTCTCTTTATGGGATGGCAACCG
TTTTGTAGGGTCTGGGTCCAAAAAaacgaccaatcaaatcatccAGATTA
GCATGGCCAGTTGATTTAACCAATTGTGAGAGGAACTGCCAAGATTGTGG
TATTAAACATTTGAAACCATTGAGCAAATTGGGATTGACAACCGGCACAA
AATGTATCATCAAGTACCCTGATATGAAGGTTGGAGATCGGTATAAGATC
ATGTTACAGCGAGTTGAAAAGGAGATGGAAATTAATACGAAAGATTTTGG
TGAAATGCCAAAAGCCCACAAAGATGAGTTGGATGAATTTGATAGAGTGG
TTAAAGGAAGCTTATGGAACGTCTTAGTCAACGATCCTCAACGATTACGA
ACTATCCTTGTTGGTCAAATGATATTGGAAAGTCCATCTCCATTCATGGA
TCGATTGGGTACATTCGACGAGATGCTTGGGTGTAATAAATGCAACGCGA
TCCATCATAAAGACACTAGATATGGTCCCATAGTGGGTGCAGAAGATGGA
AGTTTGAGATTCCCGAAACGTATAGATGCAGTAACGAAAAGTGATGAATC
GAGTTGTAAAGATTATGATATTTCTGGATGGAATGGTGATTTGAGTATCG
CTTTTGAGGGAGGTCCGCTTGTTaaggatgtttttttttatacaaaGTAT
AAAATGATCTGGTAATATGTGACCAATATACTTTATGTTTACTTAAGACC
ATTATTTGACAAACCAAAGAACAAACTGAATATTTActcaattgaaaaaa
taccaagaaaTACCATCTCACTCTTTTCGTTCATCATTAGAATTAATTTA
TGGCTAGCTAATACaaatttttagaacattttgtATGTAATTTTACATTA
TTTATTTCATAAATTTACAGTACAGAAGACTGTTTCA
Run BLAST on NCBI

transcript from alignment at sc0000143:509725..522805-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012316 ID=TCONS_00012316|Name=TCONS_00012316|organism=Clytia hemisphaerica|type=transcript|length=13081bp|location=Sequence derived from alignment at sc0000143:509725..522805- (Clytia hemisphaerica)
TCAACTTATTGTGGATGTTAAAAAACTTTATATCAAATCATGTGAATATC
ATAAAAGCACTATACTAATCTACAGAGGCGTACATGGTCACAACTTTTTA
GAGTAAGATCAATGAATCAATAACATTAACACACTTTTTAAAATTATCTT
TGAAAAAAATTAACACAGAAATGTACAGGCATGGTTATACCAATTATACG
AGTATATCTAAGGTTTCAGAACATTAAATAATAAAGACGAGTTCATTTGT
CAAGCTTCAAACTAAGGTAAGCCATTTGATTTCTTTTGCTTTAACGGACA
GCCAGTGACGCATCCTAGCTGGCACACAACGTTTTTTCGACGTTTATCTA
ACGTTCACAACGTCCATATAACGCTAGATGAACGTTAAAACAACGTTGTG
TGCCGGCTGAGATACTATATTTTGCTGACATATATCAGTTTCATATGCTT
CAAAAGGAAAATATTGACAAGAGTATGGGCGTCTACTTGCGCAATTCTGA
CGGACTTTACTCTTTTTTTATTACAAGAACAATCTTACAAAAACAACGAG
GCTCAAAAAGCCAAAAATTAATTTTAGAACAGGCCTGAGCCTGAATGACT
TTAGAGAACACCAGATTTGGACAAAAATGCTGAAAAAATGGGGAAAATAA
AAACATAGTAAGAACATTTTTAGGCTAGGAACTCAAAAAGTTAAGAAAAT
CCAAAGGCTTTAAAGATTTTTGATGTTCTTATCAAAAAAACCTGTATAGC
TTTTAGTAATTTAATTAAGTATCTCACCTAACTTACCCCTGTATCACTGA
AAAGGGCTAAATTTATTCAATTTCAAGGAATTTATTTAGTAACCAAAACT
AATAAATTTTACTGCTCATCTAACTTAACTCACCTCTGTATCAATGACAG
AGATAAGTTTTATTCAAATTTAATGAATATTTTCTTTGATTAACATGTCT
CATTAATTTGAATGTTTATCACACTTAACTCACCTCTGTATCAATGGAAG
AGAGTAAATTTATTAAATTTTTAGGAATGTTTTCTTTAATCAACATGTCT
CGTTAATTTAAATGTGTATCTCACTTAACTTACCCCTGTTTCACTGAAAG
AGATTCGTTTTATTCAAATTTTAATTAATATTTTCTTTGATTAACACGTC
TTATTAATTTGAATGTGTATCTCACTTAACTTACCCCTGTATCACTGAAA
GAGATTAGTTTCATTCAAATTTTAATGAATATTTTCTTTGACTAACACGT
CTAATCAATTTGAATGTGTATCTCACTTAACTCACCCCTGTATCACTGAA
AGAGAATAGTTTTATTCAAATTTTAATTAATATTTTCTTTGATTATCACC
TCTAATTAATTTGAATGTGTATCTCACTTAACTCACCCCTGTATCACTAA
AAGAGAATAGTTTTATTCAAATTTTAATTAATATTTTCTTTGATTAACAC
GTCTAATTAATTTGAATGTGTGTCTCACTTGACCTACCCCTGTTTCACTT
AAAGTCATCAAGGAGATTAGTTTCATTTAAATTTTAATGAATATTTTCTT
TGACTAACACGTCTAATTAATTTGAATGTGTATCTCACTTAACTCACCCC
TGTAGCACTGAAAGAGAATAGTTTTATTCAAATTTTAATTAATATTTTCT
TTGATTAACACGTCTAATTAATTTGAATGTGTATCTCACTTAACTCACCC
CTGTAGCACTGAAAGAGAATAGTTTTATTCAAATTTTAATTAATATTTTC
TTTGACTAACACGTCTCATTAATTTGAATGTGTGTCTCACTTGACCTACC
CCTGTTTCACTTAAAGTCATCAAAGAGATTAGTTTCATTCAAATTTAAGG
ATTCTTTTCTTTGATTAACACATCTCATTAATTTGAATGTGTCTCTCACT
TAACTTATCCCTGTATCACTAAAGGAGATAAGTCTTATTCAAATTTTAAT
TAATATTTTCTTTGATTAACACGTCTCGTTAATTTGAATGTGTATTTCAC
TTAACTTACCCCTGTTTCACCGAAAGAGAATAGTTTCATTCAAATTTAAG
GAATATTTTCTTTGATTAACTTGTCTCATTAATTTAAATGTGTATCTCGC
TAAACTTACCTCTGTATCACTGAAAGAGATTAGTTTCATTCAAATTTAAA
GAATATTTTCTTTGATTAACTTGTCTCATTAATTTAAATATGTATCTCAC
TTAAGTTACCCCTGTTTCACTGAAATAGATTAGTTTCATTCAAATTTAAA
GAATATTTTCTTTGATTAACATGTCTCGTTAATTTAAATGTGTATCTCAC
TTAACTTACCCCTGTATCACTAAAAGAGAATAGTTTCATTCAAATTTTAA
TGAACATTTTCTTTGATTAACACGTCTAATTAATTTGAATGTGTATCACA
CTTAACTCACCTCTGTATCACTGAAAGAGATTAGTTTCACTTAATTCTGA
TGAATATTTTCTTTGATTAACATGTCTCATTAATTTGAATGTGTCTTTTA
TTTAACACACCTTTGTATCATTGAAAGAGAGTAAATTTATTAGACTTTAA
GGAATATTTTCTTTGATTAACATGTCTCGTTAATTTAAATGTGTATCTCA
CTTAACTTACCCTTGTATCACTAAAAGAGAATAGTTTTATTCAAATTTTA
ATGAACATTTTCTTTGACTAACACGTCTAATTAATTTGAATGTGTATCTC
ACTTAACTCACCCCTGTAGCACTGAAAGAGAATAGTTTTATTCAAATTTT
AATGAACATTTTCTTTGACTAACACGTCTAATTAATTTGAATGTGTATCT
CACTTAACTCACCCCTGTAGCACTGAAAGAGAATAGTTTTATTCAAATTT
TAACTAATATTTTCTTTAATTAACATGTCTCGTTAATTTGAATGTGTATC
TCACTTAACTTACCCCTGTATCACTGAAAGAGATTAGTTTTATTCAAATC
TAATGAATCTTTTCTTTGATTAACACGTCTCATCAATTTAAATGTGTATC
TCACTTAACTTACCCCTGTATCACTGAAAGAGATTAGTTTTATTCAAATT
TAATGAATATTTTCTTTGATTAACACATCTCATTAATTTAAATGTGTATC
TCACTTAACTCACCTCTTTATCCCTAATCCCTGAAAGAGATAAGTTTTAT
TCAAATTTTAATGAATATTTTCTTTTGATTATTACTTCTCATTAATTTGA
ATGTTTATAACACTTCTCAACTCTGTATCTTGTTCTATTTTGAAATTTGT
TTTCTTTTGGTCATCACCTCCAATCTATTTGTCTATCTCATTTATCTTAC
TCCTGTATCACTATGTATTATGGCATATTTTTCTTGATTGACACATCCAA
TTAAATTCTGTATTTCACTTAACTTACCTCTGTATCACTGAAAGAGAGTA
AATTCATTTAATTTTAAGAAATATATTTCCTTATTAACACGACCAATTAA
TTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCTTC
TAGATCAGGAGATATAAGCCCTTAAAGTTTGAACTAGCGATTTTTTAAAA
AAAACTTAGAAAAAAGGACCCTGGCACTCAAAGGGTTAATGGCATTAAAG
GTTTAATTTTTACACAAGAGTTCCCGTTTCATACACATATTTCATATCAG
TACACTGTCTGCGTTTTGTTATAATATGCTGATATAAACGAAAAAATGTT
TTTCTTTTCCTGTTTCTGGCCAATCTTGCTCCACATACGTGTTAATCCAG
CTTGAAAAAGCTGGTGATGTAAAATTGATGAGTAAGCAAACCTTTAAACC
TATTGATGACTGAAAGAGAAGTAGTTTCTTTTAATCTAAAGGAGCATCTC
TGTTTTACTTACACTCTCAGTTAATTTCATGGACTTTATTGGGTTTATTT
AATGTATGACCTATCATTTTCTTAAACAGCATTGAGTATTTTTTTAGAAA
AGCAATATTGGTGAGATTCAATTTAGGTGATGCTGTTTTTTTAATACTGT
CTAATTTGCCCAAATTATTTTTCTAACTAGTTCCCTTAACTCTTTCAGTA
ATTCCCAGATTAATTTTTTCCGTTTATGTACCGGTTTGTGTAAACCGCAG
GTTACAGGTCACAGGTTACAGGTTACAGNCTGATTGGTGCCGTTTTATAT
CCATTCACACTATCAACATCACATTCTGTATTATAAATATTTTTCGTGTT
TTTGTCTTTTCTTGCATCAGATTTTATGATTCTCTTAATATTTTTGTCAA
AAATTGTCACTAAGACATTAAAATAATAACTGAATAATCAATTAGTTCCA
TCCTTCTAAAACCACTCTCTTAGGGACCTTGCAAGCTTATGTTTGGTGCC
ATTTTTTCTACATCACATTTTGCATGATAAATATTTTNAAACACAAAGAA
TTATCAAAAACATAATTCTCAAGCAATTTCATCCATATAAAACCATTTCA
AACATCAAAATTTAACCATGTGCTTTTATCCATCTTTTGCAGTTTGCGCC
GTGTATAACGCAGACCAGAAAACATTTGAAACCATATTATACGTAAAACA
GGTATATTACATATTGTAATGTTTGTAATGTTATATGATGGTTACATATA
ATAAAACACATCGCTCTAAAACTACCTTCTCCAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTTCCGGTCTGCACTTTGTTGACCTGTAACCTG
TGACCTGTAACCTGTGACCTGTAACCTGTAACCTGCGACCTGTAACCTGC
GGTTTACACAAACCGTTTATGTACCATTTTTTGGTGGCCACTATTGTTGT
TGCGAATAAAGATTAATTTTGAAAAGAGTTTTACAGCGAATCCAAACATT
AACTATTTTGCTTTAGCCAAAGCCGGGAAGATTGCACTTGAAGTTGACAT
ATCGTGGCTTTGAAATAATCTGCCAAAAATCTTTAAATTTCAGTTTAAGA
GCAAGCATTAGCTTGTAAACTAGTCCAAAATGTACAAAGAAGCTATTTGA
ACTTTAATGCGTTACCAGTTAGTAAGGGTGGAATGAAGTTTGATTAAATC
TAACTTTGATCTTGACAGTTTTGTTTGTATTTTTATTGTGTCATGTATTA
TTTACAACATTTGAAAGAACCCTAAAAATATTCAAAATAAAAAAAAATAT
ATTCAAAACTTGCTGACCAACAAAAGGCAACAAAAGACTTCAATGGATAA
CTGTTCCCAAAATTCTAATTTTTCAATTTGGATAGAGTTGATTTAAGAGG
CAAGACAATCTTAAAATTTCTCGTAAGGTCTTTAAATATGTTGGCTCAAA
GTTTTTTACAAGTCAAAAAAGTTATTTCTGAAAGCAAGGCCAAAACAAAA
CAAAAGCTAGAACAACGCTGTATTAGTATTTTTCCCTTTTTTTCATAATT
CTTACGAGGGATTGGGCTTGAGTTTTCCCTTCCTCTTTTAAATGGAAAAG
TAATTGATAAACACGTGTACTATGCCATCAAACCTTACGTACTTTTCAGT
GTGATGCCTGGTATCTCTCATGTAGATTTTCCAATATTCTGTATAATTAA
ATTACCTCTTCATGTCTTGTATTGTTTCTTGATATAACTGACTGGTAGCT
AATACCAAAAGTTTTTACTGGCAACATATTCCAGATCCGTGGATTACACA
CAAAATATCGAGTCTTGTTGGTAAAATGGTAATTTTATAAATGTCTTACT
TAACTTAAGTAAGCCTGTAAGGCTGTTAATGTTGACGAAAACAAATGAAG
ATACAAGCCTTTAACTTCAGCTTACTTTTTTCTTTCGCCATCTCCTACAC
TCCAAGGATTCGAATGTTCCATTTTAGACAAGATAACACTAAAGCTTAGT
CCAATCATGCTCATGATTTTGTGTAAGCCAACAATTACCTAATTTATGGT
CTGTTTTGTACCAAATTTCATATCTACATTATCCGCAGTTTGAATTTAGT
CAGTCCACTCTTCTTGATGCTGTCGTTGATTGTAAGCTGTTTTGAAGGTT
TATGTTGACAATATTATTTCCGTCCATAGCATTTAAATTTAAATTGGGTA
AGGAATAGGGTAAAAGAACGTATACGATTTGCCCTGTTCCTAAACAATGG
TTTTGTGAGACTACATTGCCTTCAAATGTTCTTTGAAGGTTCCTATTTGT
ACTGTTTGCATTCGTCGCATTGACAGTATTATCAATTCCATTATTACCTG
AGGAATAACTTGATAATACGTATTCATATTCATCCATATTCATAAAAATA
TTATTTTAAAACTGATAATTATACCAATGTAACAGCAGATTTTATATTTT
CAAAATGGCGGATAAATACTTCGCTTAGAACGTAAACCGACGTAAACACA
CTCGCTCCACCTTCCCGTCTCGGCTCTCCCACGGAGAGATTTTGTTTACA
TTAATGCAGATATGTTTTTTTAGAGTTCATTTGAATTTTACCTGTTCTTT
TTTATTTCTTATGGCATTAAGGTAAACTTTTAATTTCATAAATTGTATAG
AAGCAGAAGAGGAAGTGAAACCAATGATATGATTTTTAGTAATCGATGAA
ATTTTTTGAGGTGTAGACGTTTAGTTTCAAAGATATTACAGAAGGGGACA
AAATATTTCGTTCTGTGGATGTAACCAAGATTCTAGGACATTTGCAAGGG
GGATTTTGCTTCCCCCGCATACCCTCAGGTGAATATTTCCCTAGGTATCA
GTCTCGAAAATTACGGGGAGAACTATCTCCCTCCGGATTACCCCCAAGAA
ATTTAATGTTTTACGTTTCGGTGCTTTTACTGTACTTGTGGTGTTTGAGA
CAAATGCTCCCCCTCTCCAGAGGAGGTTTTTCAAAGTGGCACCGAAATAC
AAAGGGTGTAAAAGATTAATCACTAATTTCGGCACTCCTCTGCTCTTTCA
CTCACCTTAGGTATGGCAATATTTAGCAAAATTTTAGTGCTTGCTTTGCT
CTAGTCTAGAGATACATTGTTTATTTTAGAGATTTTCAAAAAATTTTCTG
TTCGGTCTCTAGAGTAAATGAAAATCAGGCTCCTCTTCTATTATCAGTAA
AATATACTTTATGAAAAAATGGTGTTGTTAAAACTCCAGAGCACTTGCAT
GATTTAACTTATTTCTATTTCTCATTCGCAGGACAATTTATCTTCTCTTT
GTGGGATGGCAACCGTTTTGTAGGGTCTGGGTCCAAAAAACGACCAATCA
AATCATCCAGATTAGCATGGCCAGTTGATTTAACCAATTGTGAGAGGAAC
TGTCAAGATTGTGGTATTAAACATTTGAAACCATTGAGCAAATTGGGATT
GACAACCGGCACAAAATGTATCATCAAGTACCCTGATATGAAGGTTAGTA
AGAACGTTTTTTCAACGCCAATTGAATATCCTATTGAAACGTCATTTGAA
TGCTGGATGGACTTTTTTTCGACGTTTTGTACAAGTTTCCAATCTAAGAT
AACCATTATTGATTTTTTCCTAAGTCGTAANTGTGTTCATAATGAGCGTA
TAGAGAGGGGCGCCAAAAACAAAAAATCTTTAAAAAGGGCGCCATATTTG
CCTTGGCCACCCCAGAGACATTTTCCCACCACGCCACTACGTTAGGTATG
GCAATATTTTGCAAAATTTTAGTGCTTGCTTTGCTCTAGTCTAGAGCTAC
ATTTGTTTATTTTAGAGATTTTCAAAAAATTTTCTGTTCGGTCTCTAGAG
TAAATGAAAATCAGGCTCCTCTTCTATTATCAGTAAAATATACTTTATAA
AAAAACGGTGTTGTTAAAACTCCAGAGCACTTGCATGATTTAACTTATTT
CTATTTCTCATTCACAGGACAATTTATCTTCTCTTTATGGGATGGCAACC
GTTTTGTAGGGTCTGGGTCCAAAAAAACGACCAATCAAATCATCCAGATT
AGCATGGCCAGTTGATTTAACCAATTGTGAGAGGAACTGCCAAGATTGTG
GTATTAAACATTTGAAACCATTGAGCAAATTGGGATTGACAACCGGCACA
AAATGTATCATCAAGTACCCTGATATGAAGGTTAGTAAGAACGTTTTTTC
AACGCCAATTGAATATCATATTGAAACGTCATTTGAATGCTGGATAGACT
TTTTTTCGACGTTTTGTGCAAGCTTTCCAATCTAAGATAACCATTATTGA
TTTTTTCCTAAGTCGTAAGAACGATGCCCTCTTTTGATGCAGGTAGAATG
AACTTTGGGTTGTTAAGCAGGCCGAATTTCAGAGATTAAGGGTTATTAGT
GAAAAAGTAATTTTTAAGTCGTAAAATGAACTAACTTAGACCATGTTTAC
ACGTTACTATTTCGTTTCGCTCCGGTAGTATTTTCGTTACGGATCGAGTG
TGTTCATATTGGTTTCAGAACGTTTCGGAGCAAGAAAATGAAGCAGTTCC
GTTCCGATGAAAAAAGTGGAGCGAAACTGTTTCGATTTTTTTTGCTTTGT
AGCGTCTTCTTTTTTAACGTTTCGATTTTTACGTTCACTCTTGTTTCGGA
ACCGGAACTGAATGGAACCGGAGTCTGAATATGGTCTTAGATGACCTTGA
AAACTTACTCGTATTGTTATAGGATCCGACCGTTAAACATAGCCAGATTC
AAACCTCAGGTTAATAGAAACAAAGAAATATCCTCCTTACTTGTGAATTT
CATAGTAATATTACCCTCATTAGGAATAGAGAGGGAAAGATTGCCCTTGA
AACACCCCCTTCTCACAGACCAAGTAGGATTTTTTTCAGCGAGGGTGGGT
AAAAATAACAGACTCTGACTCAATAGGGATTTATATTTCCATATTTTTTG
TGGCTAGGGACTTCTATTCTTTTGTTTTTAAGTCAGAAAATTCAGCGAGG
ATGGGAAAAATAGTAAATATTTTGCAGCGAGGATTGCTTTATTTGATTAT
TTTCAGTGGGGACAAAAATTAAAGTATAGTGTGGGTGCGTGAGAAGGGGG
TGTCTCGAAAGCCAAAAAGACCGAAAAAATTGATTTATATTTCCCGGTCT
GAATTTTGATTGAAAGCTTAACCACTGAAGTAACAAGCTTAATTCGAGTA
ACTAAGACAAGTACAGTATGTTAGAAAAGTCCATACTTGCTATGAACTTC
TATTTCAATACTACCTACCAACTTTACCAAAAAGCTTGATAATGCCTGAT
TAAGCTTGATTAAGCCTTGTTCTGAAACATAGGGATGAAATTGAAATTAT
CCAAATGGGCTTTTCCAGAAAAAACCCATACCCCATGTCGAGGAGATCCC
TCCCTCTGTGGCTGGAAATGCTGTAACCTCCTGGAATTCCAGGTAATTTC
AGGTTTAAACCCTTCTTGAATTCTGAGTTTTAGTAGGATTTAAAAAGCTA
CCCCTATGGAATTCCACTTCTTTTTGACAGATTTTTGTATCTCACTATAG
AATTCCGCCACATATCAAAACTTACCTCCTTAACCTGAGTATCAGAGGTT
CAGTTTTCAAAGAATATATTAACCTCTGAAGACAAATAATAGAAATTTTA
TCGCGCAAGTGTAAATCTAATCACTGTAGAAAGAATCAAAGATGAAGAGC
AAATATTACCTCATTAATGTCTAGCAGACTGTATCAGTATGCAGTTTACT
ATTTACGAATTCCCCAGAAACCTCCAAGTGTAATTGAAGTGAGTTTCTTT
CGAAAGAAATCTTTTACATGATCCCCAAATGTATAACNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATAACAGTAAT
TACTAAACTATTAATTATGGAAATGTCACTTTAATTGAATCGAAATAATA
GACAGACTTTATGTTACGATTCTCTATCACTGACTTTTTTTAAAAAGCAT
TGATGACATTTTTTAGTTGTGTTTTCAACGACGGGAATAAAAATATCAAC
TTTGAACTTCATCCAAGATCTTGGATGGTTTCCATGGTTACCTTTTTCTT
CGTTGATTGCGTGCTGAATAGAATCTTGATTCGTCGGCACAGCGTCGATA
TATGATTTCGACCTGTGCTTTTTACCGTATTACCTCCTTGGAACGAAAAC
GGACCTCCTCAACGGGGGTTATACGGTTTTCTTCTGGAAAAGCCCAATAT
ATGTATGACTTTTGTCGATTTTCAATTAGTTAGTTAGGGGATAACCCACC
GGATATCTTTGTTACTAACGAATAACCTTGATGTAAAATCTGAATTGATT
TTTTCTAGGTTGGAGATCGGTATAAGATCATGTTACAGCGAGTTGAAAAG
GAGATGGAAATTAATACGAAAGATTTTGGTGAAATGCCAAAAGCCCACAA
AGATGAGTTGGATGAATTTGATAGAGTGGTTAAAGGTGTGTTTAAGGAAC
CTATTAACCTCTAATACTTTCAATATCCACTCATGTAAAAATTTGTGACC
GTAGCCGTAAATTGCTGCGCTGGCACCTTTTTGTCCGTGTTACCACCCTA
AAACCACCCCAGTCTTTTTGTCGCACCTAAAGACAATAGAAAAAAGTGAA
AAACAAGGATTGGATCGAGTTTAGGGTGGTAAATTAAATAATAAAGTGGC
CGCCTGACCACGCGACTACGGTCGATAGAAATAGTACTTGAAGTGTTTTT
CTGAGTACAATCTCAAAACCTCAGTGAAACGTTTTTTCTAGAGCCGAGGA
AAATTTATAACGAAGTCCAAAAGGGGATAGAAATCCTATTGTAAAGACAA
GCTAAAATAAGGCTACTAAGGCGGGAGTTGTTGATATATGATATTAATCT
CAAGATCCATGTTGACTGACTAGGACTATGTTTCTAAAAATTCTAAGAGC
TGTAAAGCGAGTAAGCTTGTTTTATAAATACAATTTCATCTTGTATACAG
GAAGCTTATGGAACGTCTTAGTCAACGATCCTCAACGATTACGAACTATC
CTTGTTGGTCAAATGATATTGGAAAGTCCATCTCCATTCATGGATCGATT
GGGTACATTCGACGAGATGCTTGGGTGTAATAAATGCAACGCGATCCATC
ATAAAGACACTAGATATGGTCCCATAGTGGGTGCAGAAGATGGAAGTTTG
AGATTCCCGAAACGTATAGATGCAGTAACGAAAAGTGATGAATCGAGTTG
TAAAGATTATGATATTTCTGGATGGAATGGTGATTTGAGTATCGCTTTTG
AGGGAGGTCCGCTTGTTAAGGATGTTTTTTTTTATACAAAGTATAAAATG
ATCTGGTAATATGTGACCAATATACTTTATGTTTACTTAAGACCATTATT
TGACAAACCAAAGAACAAACTGAATATTTACTCAATTGAAAAAATACCAA
GAAATACCATCTCACTCTTTTCGTTCATCATTAGAATTAATTTATGGCTA
GCTAATACAAATTTTTAGAACATTTTGTATGTAATTTTACATTATTTATT
TCATAAATTTACAGTACAGAAGACTGTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006928XLOC_006928Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012316-exon-sc0000143-1575043694:522540..522805TCONS_00012316-exon-sc0000143-1575043694:522540..522805Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1575043694:513126..513338TCONS_00012316-exon-sc0000143-1575043694:513126..513338Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1575043694:510821..510947TCONS_00012316-exon-sc0000143-1575043694:510821..510947Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1575043694:509725..510305TCONS_00012316-exon-sc0000143-1575043694:509725..510305Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1510915933:522540..522805TCONS_00012316-exon-sc0000143-1510915933:522540..522805Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1510915933:513126..513338TCONS_00012316-exon-sc0000143-1510915933:513126..513338Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1510915933:510821..510947TCONS_00012316-exon-sc0000143-1510915933:510821..510947Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1510915933:509725..510305TCONS_00012316-exon-sc0000143-1510915933:509725..510305Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1491911889:522540..522805TCONS_00012316-exon-sc0000143-1491911889:522540..522805Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1491911889:513126..513338TCONS_00012316-exon-sc0000143-1491911889:513126..513338Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1491911889:510821..510947TCONS_00012316-exon-sc0000143-1491911889:510821..510947Clytia hemisphaericaexon
TCONS_00012316-exon-sc0000143-1491911889:509725..510305TCONS_00012316-exon-sc0000143-1491911889:509725..510305Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000143supercontigsc0000143:509725..522805 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.133332	0.785919	0.322559	1.07888	0.459959	0.146651	1.79645	1.07054	5.0059	7.52518	2.73835	1.02381	4.25261	3.26812	0	1.16396	0.935189	1.96201	0.622211	1.10616	13.1259	13.0069	2.5526	2.66144
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012316 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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