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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012451 ID=TCONS_00012451|Name=TCONS_00012451|organism=Clytia hemisphaerica|type=transcript|length=915bp
CACCCGTTGAAGGATGTGAAAATACTGAGACTAAAATGTTTTTGGATAAG
ATTGAGCGACTTGAGAGTCAGCTAAGACAACAGAACATTCAACTTACATC
GAGAGCCGAGGGGGATGTCAAGAAGAAAAAGATCCTTAGCGATCGCGAAG
CGGAGATAAAAAGCAAAGATACTAAGATTACTAATTTAACTGACCAGCTA
ACGAAGCAAAAAGGGATCAGCAACGCTATCCATAAGCAGCGTGattatga
aaaagaagaaaagcgCAAAATGGAAAAAGAATTATTGAAAGTGCGCGACA
AACTGCAAGCGACTAAGTTGCAATGTGAAAATCTTCGTCAAAATCATGCG
GCAACACTGAAAGTAAATCCTAAAAGTAACGACAAGAATATGTACAACAA
ACCCAAATTAACTAGCAACATAAATGCTCTGGATGGTCAATCTACAGGAA
ACGAATGGGACGACAATCCAACACTGCAACCTAATGACAACAGTGAACAG
AATGTTACCACATCTCAAAACAATCTCCAGAAAGGAACAGCTTGTTTGAA
GAAGAAGAGGAATAAGAATAAGAATCGGAAATCAAGATCGAATAATGCCA
AAATCAGAACAGAACCAGACCAATCTGATTGGAGCTGGCCTTTATCCGGA
TTGGTCTCATGGTTCACAAAACCTTCGTCCAAATAAGCGAAATTTTAATA
CGTATTCTTTTTAACTTCTATTTTAAATGCTCTCAGGAACattctttatc
cattttgaatatataaaaatcacaaaaactaCAAAAACTCCCTTCGTGCA
TTTTCTATTGTTTCCTCCCTGACCATGTTGGACTCAAGGATTTCACTACA
GCTGGTTTTGAATTCCCAGTTTGTTCAGCTGATTTTTGTAAGATTGCAAA
GCCACGAccttgttt Run BLAST on NCBI protein sequence of TCONS_00012451-protein >TCONS_00012451-protein ID=TCONS_00012451-protein|Name=TCONS_00012451-protein|organism=Clytia hemisphaerica|type=polypeptide|length=227bp
PVEGCENTETKMFLDKIERLESQLRQQNIQLTSRAEGDVKKKKILSDREA
EIKSKDTKITNLTDQLTKQKGISNAIHKQRDYEKEEKRKMEKELLKVRDK
LQATKLQCENLRQNHAATLKVNPKSNDKNMYNKPKLTSNINALDGQSTGN
EWDDNPTLQPNDNSEQNVTTSQNNLQKGTACLKKKRNKNKNRKSRSNNAK
IRTEPDQSDWSWPLSGLVSWFTKPSSK Run BLAST on NCBI transcript from alignment at sc0000144:191581..192878- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012451 ID=TCONS_00012451|Name=TCONS_00012451|organism=Clytia hemisphaerica|type=transcript|length=1298bp|location=Sequence derived from alignment at sc0000144:191581..192878- (Clytia hemisphaerica)
CACCCGTTGAAGGATGTGAAAATACTGAGACTAAAATGTTTTTGGATAAG
ATTGAGCGACTTGAGAGTCAGCTAAGACAACAGAACATTCAACTTACATC
GAGAGCCGAGGGGGATGTCAAGAAGAAAAAGATCCTTAGCGATCGCGAAG
CGGAGATAAAAAGCAAAGATACTAAGATTACTAATTTAACTGACCAGCTA
ACGAAGCAAAAAGGGATCAGCAACGCTATCCATAAGCAGCGTGATTATGA
AAAAGAAGAAAAGCGCAAAATGGAAAAAGAATTATTGAAAGTGCGCGACA
AACTGCAAGCGACTAAGTTGCAATGTGAAAATCTTCGTCAAAATCATGCG
GCAACACTGAAAGTAAATCCTAAAAGTAACGACAAGAATATGTACAACAA
ACCCAAATTAACTAGCAACATAAATGGTAAGGAAAAATTTAATTTTTATC
GCATTGACATTTAGCTTCAAGGAGATAAATTTCCAAACACAATGATTCTG
ATTCGCGAAATTGAATTTCATTGAAAAAAGCCGAATTACAGTTCGTAAGT
ATTTTTCTGGAAGGACTTCTTGAGTACTCTGTGACGAATGATATCCATAC
AAAAATGAAGTGGTAGAAATCATAAAATTTACCCTTTCTGGTCTGGGCAC
ATATTTAGGTCTTTCTATGTTTTTGGAAAGTACTTTTGCTGCGAATATGT
CTTATTCTTATGCATCTATAATCACGCCGTGCAACTTTGTCACTTTTACA
ATTCCTATCTTACATCTTATATAGTATAAGTATAATATGTTCTTGCTTTT
CCTTTATAGCTCTGGATGGTCAATCTACAGGAAACGAATGGGACGACAAT
CCAACACTGCAACCTAATGACAACAGTGAACAGAATGTTACCACATCTCA
AAACAATCTCCAGAAAGGAACAGCTTGTTTGAAGAAGAAGAGGAATAAGA
ATAAGAATCGGAAATCAAGATCGAATAATGCCAAAATCAGAACAGAACCA
GACCAATCTGATTGGAGCTGGCCTTTATCCGGATTGGTCTCATGGTTCAC
AAAACCTTCGTCCAAATAAGCGAAATTTTAATACGTATTCTTTTTAACTT
CTATTTTAAATGCTCTCAGGAACATTCTTTATCCATTTTGAATATATAAA
AATCACAAAAACTACAAAAACTCCCTTCGTGCATTTTCTATTGTTTCCTC
CCTGACCATGTTGGACTCAAGGATTTCACTACAGCTGGTTTTGAATTCCC
AGTTTGTTCAGCTGATTTTTGTAAGATTGCAAAGCCACGACCTTGTTT Coding sequence (CDS) from alignment at sc0000144:191581..192878- >TCONS_00012451 ID=TCONS_00012451|Name=TCONS_00012451|organism=Clytia hemisphaerica|type=CDS|length=1368bp|location=Sequence derived from alignment at sc0000144:191581..192878- (Clytia hemisphaerica)
CTCTGGATGGTCAATCTACAGGAAACGAATGGGACGACAATCCAACACTG
CAACCTAATGACAACAGTGAACAGAATGTTACCACATCTCAAAACAATCT
CCAGAAAGGAACAGCTTGTTTGAAGAAGAAGAGGAATAAGAATAAGAATC
GGAAATCAAGATCGAATAATGCCAAAATCAGAACAGAACCAGACCAATCT
GATTGGAGCTGGCCTTTATCCGGATTGGTCTCATGGTTCACAAAACCTTC
GTCCAAATAACCCGTTGAAGGATGTGAAAATACTGAGACTAAAATGTTTT
TGGATAAGATTGAGCGACTTGAGAGTCAGCTAAGACAACAGAACATTCAA
CTTACATCGAGAGCCGAGGGGGATGTCAAGAAGAAAAAGATCCTTAGCGA
TCGCGAAGCGGAGATAAAAAGCAAAGATACTAAGATTACTAATTTAACTG
ACCAGCTAACGAAGCAAAAAGGGATCAGCAACGCTATCCATAAGCAGCGT
GATTATGAAAAAGAAGAAAAGCGCAAAATGGAAAAAGAATTATTGAAAGT
GCGCGACAAACTGCAAGCGACTAAGTTGCAATGTGAAAATCTTCGTCAAA
ATCATGCGGCAACACTGAAAGTAAATCCTAAAAGTAACGACAAGAATATG
TACAACAAACCCAAATTAACTAGCAACATAAATGCTCTGGATGGTCAATC
TACAGGAAACGAATGGGACGACAATCCAACACTGCAACCTAATGACAACA
GTGAACAGAATGTTACCACATCTCAAAACAATCTCCAGAAAGGAACAGCT
TGTTTGAAGAAGAAGAGGAATAAGAATAAGAATCGGAAATCAAGATCGAA
TAATGCCAAAATCAGAACAGAACCAGACCAATCTGATTGGAGCTGGCCTT
TATCCGGATTGGTCTCATGGTTCACAAAACCTTCGTCCAAATAACCCGTT
GAAGGATGTGAAAATACTGAGACTAAAATGTTTTTGGATAAGATTGAGCG
ACTTGAGAGTCAGCTAAGACAACAGAACATTCAACTTACATCGAGAGCCG
AGGGGGATGTCAAGAAGAAAAAGATCCTTAGCGATCGCGAAGCGGAGATA
AAAAGCAAAGATACTAAGATTACTAATTTAACTGACCAGCTAACGAAGCA
AAAAGGGATCAGCAACGCTATCCATAAGCAGCGTGATTATGAAAAAGAAG
AAAAGCGCAAAATGGAAAAAGAATTATTGAAAGTGCGCGACAAACTGCAA
GCGACTAAGTTGCAATGTGAAAATCTTCGTCAAAATCATGCGGCAACACT
GAAAGTAAATCCTAAAAGTAACGACAAGAATATGTACAACAAACCCAAAT
TAACTAGCAACATAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012451-exon-sc0000144-1575043694:192453..192878 | TCONS_00012451-exon-sc0000144-1575043694:192453..192878 | Clytia hemisphaerica | exon |
| TCONS_00012451-exon-sc0000144-1575043694:191581..192069 | TCONS_00012451-exon-sc0000144-1575043694:191581..192069 | Clytia hemisphaerica | exon |
| TCONS_00012451-exon-sc0000144-1510915933:192453..192878 | TCONS_00012451-exon-sc0000144-1510915933:192453..192878 | Clytia hemisphaerica | exon |
| TCONS_00012451-exon-sc0000144-1510915933:191581..192069 | TCONS_00012451-exon-sc0000144-1510915933:191581..192069 | Clytia hemisphaerica | exon |
| TCONS_00012451-exon-sc0000144-1491911889:192453..192878 | TCONS_00012451-exon-sc0000144-1491911889:192453..192878 | Clytia hemisphaerica | exon |
| TCONS_00012451-exon-sc0000144-1491911889:191581..192069 | TCONS_00012451-exon-sc0000144-1491911889:191581..192069 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000144 | supercontig | sc0000144:191581..192878 - |
Blast
The following BLAST results are available for this feature:
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