TCONS_00012544 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012544
Unique NameTCONS_00012544
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2309

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012544 ID=TCONS_00012544|Name=TCONS_00012544|organism=Clytia hemisphaerica|type=transcript|length=2309bp
CAGCATTGTAAAACTTACAAAAAAGCTTGTTTcaaattcttcttcttctc
gATTCCCAGACAAGCAAATATTGTAGTTAACACGTTTGTTCAAAATCAAG
TTTAGGTAGGGATACCTATggataaaaaatttgatgatCTAGCAGCTGAC
GGCTATGCTTTGTTGGAAATGTCTTAGTAGCCTGATTTTCATTTTGGTAT
TTGTTCTAGCTCAAAAAGttttcactcAAGAGCCTAAGAGAAAGCAAATC
ACCAATATCCAAAAcattttaacttctttgaaaCAACCATCACAATCAAT
AGTTACTAAGGGAGCAATAAAACAAAATGGTGGACCAGTTGTGAAGAGTA
AATTTGCGTCAACAAAGAATCTCAAAGAAATTGTGATCGGAAGATGTTAC
GAATATATGTTCAAAAGAGACATTCCTGAGAAATGGGATTGTGGTCaaat
ttggtccaaattttTCGAGGCGTTTGCATATAAAGGACCTTGCGACGTCA
TGCAAAAAGACTATGAAGGGCTTATTGACTACATGGATGAAGAAGTTCCT
CGGAATAAGggTTTGTTATGGTCTGGTTCTCGAGAAATCTCTCacaaatt
ttccgattttcgatACACCAATCGGTTTATTACACTGGAAGATACATTAG
CTGGatttttggtcAACAAATTGAGTTGGTGTGGAACAGAAAAGGATCCT
GGGATTGATTTCACACAATGCCCTTGGGAATGTTCCATTCAAGCACCCTA
TTGGTCAATTGCTAATAAAAagtTTGCACAGAAACTTCGTGGCATTGTTC
ACATCATTTTGAATGGAACACGACAACATCTTGATGATAAAAACGTCTAC
CCTTCATTCATGCAGAATAGATATTACCTTGGACCATACGTTTTGCCGGA
GGTGAACTCcaaaaacattgataaaatTGTAATCATTGTGGCCCATACAC
TTCATCTAAAGCCTTTGGAGAGTTGTGGAGAGAGGACAGTATTATTACTT
ACCGACTTGATACGGAACAAAGGAATTGCTGTCGATTGCCATGACGACAC
TGACGCTGTCCGTCATTTGTTGTGTGTGGATGACCCAAGTGCTGACGTAT
GCAAATTTCAAGCCATTGGACTGGTCCGTGAAAAGAGCCAATAAGAAGAA
AAAGATGTCATTCACCCCTCATGACCGAAGCAGCTGTTTTTTTAACTACA
GAACTATTGAGTGGTACTTTCTTCGTTTAAATGCCACCAAAGTAGTCTAT
TTCATTGATGAATAGTGGTTGCAAAAAATGTTAGACTCTACCACTCACAT
TGGTTTGGGCTATAGAGAAAATTCAGAAAGGGACATTGTTACCACAAGTT
TTAAGTATTgtagtggagtctctttaactcgaacctctataactcgaatg
tctccttaactcgaacaagttccATGGTCCCTTCACTTAAAAATGCCTTG
TAAACATTACCCCATCACTCAaaatctccttaactcgaacaaatctgTGT
CCCCcctgcgtgttcgagttatgggagACTCACTGTCAATACATTTTAAG
TAAACTTCATGACCGGCTCGAAAAATATGGCATTGGAAAGCGTAGAAATA
TATCTAAAGGACGCCAAGGATCAAAAAAGGTAAACGGACGAAAAAAAGTC
CAAAGAAGTACGAATTACGTCCAAAGAACATTCATCGTAACTTTTCGGGT
GATTTGACGGTGAAAATTTGCAATGTAttgaaatttatcattttttttta
ctaagaattgttgaaatattgtAGCCTTTCGCCGAGAATTGACCTAAAAA
AAGTCACGGTGAGTTTTTTTCACCGATTTTTCCAATgcttgaaaaatgac
aaaataattATTAGTTTGGATGAAGAagaattttttatataaataagcTC
TGTGAAAAAAATGATGGTTTCAACAGAACGTTACTTCATTGTCTTATGTA
CAAACGATAAATTTTCTCTTATAATAAAACTCGACGACGATATTACAAAA
ACAATTTCTATTTTATATCCTCCTCTCCTAGTCTCTCACATCATTGATTT
AAAAGCCTCGAAGGAACTAGATTtgaaactcctggatgggaaatgaagct
acttacttatttcccatccgtGACccgtatggcgcgccaaagcggaaata
aatactatctctcatttcgcgacactatctttcatttcacgaCACTATCT
CTCATTttgcgacactatctttcatttcacgacactatctttcatttcgc
gacactatctttcatttcgcgacactatcttttatttcgcgacactatct
tttattttG
Run BLAST on NCBI

protein sequence of TCONS_00012544-protein

>TCONS_00012544-protein ID=TCONS_00012544-protein|Name=TCONS_00012544-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MLCWKCLSSLIFILVFVLAQKVFTQEPKRKQITNIQNILTSLKQPSQSIV
TKGAIKQNGGPVVKSKFASTKNLKEIVIGRCYEYMFKRDIPEKWDCGQIW
SKFFEAFAYKGPCDVMQKDYEGLIDYMDEEVPRNKGLLWSGSREISHKFS
DFRYTNRFITLEDTLAGFLVNKLSWCGTEKDPGIDFTQCPWECSIQAPYW
SIANKKFAQKLRGIVHIILNGTRQHLDDKNVYPSFMQNRYYLGPYVLPEV
NSKNIDKIVIIVAHTLHLKPLESCGERTVLLLTDLIRNKGIAVDCHDDTD
AVRHLLCVDDPSADVCKFQAIGLVREKSQ
Run BLAST on NCBI

transcript from alignment at sc0000145:64935..71933-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012544 ID=TCONS_00012544|Name=TCONS_00012544|organism=Clytia hemisphaerica|type=transcript|length=6999bp|location=Sequence derived from alignment at sc0000145:64935..71933- (Clytia hemisphaerica)
CAGCATTGTAAAACTTACAAAAAAGCTTGTTTCAAATTCTTCTTCTTCTC
GATTCCCAGACAAGCAAATATTGTAGTTAACACGTTTGTTCAAAATCAAG
TTTAGGTAGGGATACCTATGGATAAAAAATTTGATGATCTAGCAGCTGAC
GGCTATGCTTTGTTGGAAATGTCTTAGTAGCCTGATTTTCATTTTGGTAT
TTGTTCTAGCTCAAAAAGGTAACAATTTATTAAAATCTTTCTACAAATGG
TGATAAAATAGTTAGGCTTGTAAAAAACTTGTTGTTGAATACGTGTTTGT
TTTATATGGAACCTTAACTTGGCAAAAAAGGTCCAATCGGGTCTCTTACA
CGTGGTGTATTCCTGGTTAGAAAGAATATTACTGAGTCTGTGAAACGAGG
TTCAAATTTTCTATTGATTTTTTTAGTTTTCACTCAAGAGCCTAAGAGAA
AGCAAATCACCAATATCCAAAACATTTTAACTTCTTTGAAACAACCATCA
CAATCAATAGTTACTAAGGGAGCAATAAAACAAAATGGTGGACCAGTTGT
GAAGAGTAAATTTGCGTCAACAAAGAATCTCAAAGAAATTGTGATCGGAA
GATGTTACGAATATATGTTCAAAAGAGACATTCCTGAGAAATGGGATTGT
GGTCAAATTTGGTCCAAATTTTTCGAGGCGTTTGCATATAAAGGACCTTG
CGACGTCATGCAAAAAGACTATGAAGGGCTTATTGACTACATGGATGAAG
AAGTTCCTCGGAATAAGGTATGTTAATACACCTTTTCGACCATAGCCGCC
AATTTCCGCGTGGGCATTTTTTTGCCCGTTTTACCACCCTAAAACCGTCC
CAGTCTTTTTTTCCCAGTCTCACAATTTTCGTCCATGATTGTACATGTTT
AAATACCTTAAGTATATTAATTTTGGCGCGTGTACTTGATCTTGTGGTTT
GGCCGAAATGTGATTTTTGGCGGGTGTTTAATCTAGCGGATTGTAGAATT
TGTAGAATTTGGTGCATGGTCAATTTTCAAACTTTTGTCGGGCATTTAAT
TTGGTGGATTTCACCGAAAAATACCCCAATGCCGCCAAATTTAATCCCCG
CCAAAATTAAGGTAAGCATCAAACCGCCCAATATTCTGATTTTACTCCGT
GTTTTGTTTGTTTTCAGGGTTTGTTATGGTCTGGTTCTCGAGAAATCTCT
CACAAATTTTCCGATTTTCGATACACCAATCGGTTTATTACACTGGAAGA
TACATTAGCTGGGTAAGTATTTATCTCCTGTACACCGAGGCATTTGTTAA
TTTGAATATGTCAAAAGAAAAATTTGGTTTAGTTACACTAAAAAGTACAC
GTTTTTTTTTATAAGAACAAACTATATAAGAACATAAGGCTTCGAGGCCC
AAAAGTTTAAGAACATTCTAAGAACATTCTAAGGCTTTGGAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAAAAAAAAACGTGTATTGTTTTACAAAGACATCGAAATATAGCTTAAA
AATTCGACTAGAAGTTTCTTGTATGAATAAACAGCTTATTATTTGGCAGT
CTTTTCAGTAATCTGTCTTTGATGAATACCTTTTTATGGACTTCCAAGTT
AAAGAAATCTAAGTAATTTCTGACCAGGTTTGCATCAAAAAGGCAGATTC
ACTATGAGTTGATACGAAAGTGTGCACTCTTTTTTCATTTACTTATAACT
TTTGAAGGACCTCTTCAATCTTTATAAGTTTGGTATCATTAAAAAGATAC
TAGTGAGTGGAACAATTTCAAATAAAAAAATCTTTAAACAAATTCTAAAA
ATGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTGTAGAAAAGTGC
TATAACTTTCGTTTTCACTGGAGAAATTCTTTGATCTTAGGTAGTCATCA
CTGTGAAAAGATTTCACTGAAATATTTATTCATTATAAAGTTATGATACA
TAGTTAATAAGTGATTGACCCCAAAAAACAACAGAAAACAGCGTTTTTAG
ACGTCAATCAGCTTATAACTTTGTTTGATATCTTTTGACTGAATCATTAT
TTTTTAGAAGTTTTTTTCACAGTGATGACGTTCGATGATCAAGGATTTAC
TTCAGTGAAAATGATAGTTATAGCACTTTTCTACGAGATCTTCATTTTTT
TCTTCTTCATTTTCATCTTCATTTTTAGAGTTTTTTTAAAGAATTTTTTA
TTTTATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATAGGTGAAAGAA
AAAAGAGTGCACACTTATCGTGAACAGACTTTAATACAAGAATGAATAGA
TAACACCTCAAATTATTAAACCTGACGGAATCACACAGAATCAATCGTTT
GCACGATTCTTGACAACATTCTCTTAAGGCCGGTCTCCACTTCAGCGCGC
TTTGATCGCACTTTTTCGAGCAATGCTTCTCCGCTATTGGTCAAAAGAAA
AATGAAGCAATTCCATTGGCGCGATCTGACGTAACGGTTGAAAAAAGTTG
AAATGTGTTCAACTTTTCTTTTGAGCGCGCGCTACATTTTTATGACAAAG
CAATATATAGCAAAAAGGATTGAAGCCAAAAAGTGCGATTGCAGCGCTCG
CGAGAAGAGACCGGCCTTTAGAGATCACACAGAATGATATTCTATTTTTT
CAGATTTTTGGTCAACAAATTGAGTTGGTGTGGAACAGAAAAGGATCCTG
GGATTGATTTCACACAATGCCCTTGGGAATGTTCCATTCAAGCACCCTAT
TGGTCAATTGCTAATAAAAAGGTAAATGGGTTTTTATAATACAATTGTAG
CCAAACGTTTCGCTTGTACTCAAATGAATAAGGATCGTTAGGTCGCTTCA
ATTAGATTTATTCAAGTGCAAAATTGCTGAAGAAAAATTTATCCCAGTGA
ACATTGACAAATTCTGAATAATCAAGGACCTTTTAAGATACATTTAGGGT
GAACAAAGGACAGTTATCGCCGGGTAGAAAACTTTTGAGTGTACGAGCTT
AATAACCAAATACATTTTTGAGTCTCCAAATACGAACTGTCTTTCTGTCG
ATAATATCGAGTTTTCAAACTCATTTTTAACTTTTAAAAACTTTTCAAAA
TGTTTAGTTTGCACAGAAACTTCGTGGCATTGTTCACATCATTTTGAATG
GAACACGACAACATCTTGATGATAAAAACGTCTACCCTTCATTCATGCAG
AATAGGTAAGTGTTTAGATACTGAAGTCGTTTATAATACAGTAATGTGGG
TGTTATATGATAATACGATGATTGTTGTGGGATAGCATCACATTTTGTAT
AAACTACTTTTACAAAATTTGTCCTTTCTACACCCTGTCTCACAGCCCCG
GCCAAACTCTTTATGGGGATAAAAATTGTTATTGAAATCCCAATGGAGAT
AGAAATCCTATTTTTCCGATGTTAAAAAATTAAGTGGGGATGGTTTTGGA
GTGCAATTTTTAAACATGGCATTGGGAGTAGGGATGAAATCAAAGTCAAT
TTCCCAGTGGAGCTGAAATTTCAAGGTATTTTCCCACTGGGGACGAAATT
TTAGCCAAATTTTCCAGTGGGGCTGGGGTCCCAGTGGGTCTGTGATACAG
GGGTGTTTGTTTGCTTATTTTTTATTACGTCTGAATTAGTCGTCCAACAT
GCAGGATGCGTAAGTGGTAAAATTAGCGTAAAATTTGTTGCTCAAAATTC
TTAATAACCCATGTCGATGATGGAGTTTAAAAATTGTTTGATCTTTAAAT
CCTAATCTGAATCACAGACCTCTACAAACCCTCTGGTAGTATCTATAAGG
AGCACGAATCCGATCGTATTTGTTACAAATGCAAGCAGTCTACTTTTAAA
CCTTGTCAGAGCTCAAATTGTTATTGTTTTATCTATTCTGCTTTTCCAGA
TATTACCTTGGACCATACGTTTTGCCGGAGGTGAACTCCAAAAACATTGA
TAAAATTGTAATCATTGTGGCCCATACACTTCATCTAAAGCCTTTGTAAG
TATAAGTTCTTTCATACATCCCTGTCTCAAAATCTTCGGATAAAATTAAC
AAGTCAAATGCCAATGGTTTTGGAAAATTCCTCACTTTTAATAAGTGGGG
TTTTCAATTTCAGTGTTTAAAGATCGATCACGCAGAAGAGGCTAGCAGAG
TATTTTTATTTTCCCTACGCAAATAAGGTTTCAATGTAGTTTCCAATGGG
GATAGCATTTTAGAAATCTGGAACTCCAAATGTCTAGCCTTATGAAAACC
CCCGGGGGAGGGGCCCGTGTTCTTTAAGGGTCGAATTGAGCAAAGAGGAG
AAAAAGTGTACTCTAAGGGTGTAAAATTTGTAGATCTGACCAAATCTGTC
GATTTTTATCCACAGTTCACTCAAATTTGACTTATTTTTCTCTGCACTGG
AAGGGTCCGATTTCAAAGGCCTAATTGTGGGCTCACGCACGGTTGTTTTT
GAATCGAGTGCCCCTTACCTCTCGGGAGAAGATCTAAGTCGGAAATTCTA
AAAGTGAAGAAGTGACATAACGAATCCACGTAGAATCATTTTAACTTTGA
TACGTGTTTTTATAAGCAAGTGGTTGTCCCTATATCAGAATTTACATTAT
GCTTAGTATTCTATTGTTCTCAAAAAATAGAGCTATTGTTTAGGAACCAA
AAACTGAGCCTGCATAATGCTTATAAAAGAAAAAACATGTATCATCACCC
AGGGCATTAATCGATTTATCTGATTCCTCTTACACTATTGGTGATTCTGA
TGGACGTCTCTTTACATCGAAGAATCGTTTATCGTGATCGTGTTCACAAA
GATTGTTATAAGCAAATTTCTTCTTAGGGAGAGTTGTGGAGAGAGGACAG
TATTATTACTTACCGACTTGATACGGAACAAAGGAATTGCTGTCGATTGC
CATGACGACACTGAGTAAGTGAAACACCAAAGAAAAACCTTAATTTCAAA
CCACCTTGCAAATACACCTTTTCGACCGTAGTCGCGCGATCAGGCGCGTG
CCACTTTTATCCCACCTAACTCGATCCAATCCTTTTTCGACACATTTTTC
TATTGTCTATTGGTGCAAAAAAGGACTGGGACGGTTTTAGTGGGATAAAG
TGGACAAAAAAATGCCCACTTTTTGGGCCAAGGTCTTTACAGCTTTTTAT
CTTTTCGGACTTTAAATAAAATAACTGCAATTCTTACCAATAGCGCTGTC
CGTCATTTGTTGTGTGTGGATGACCCAAGTGCTGACGTATGCAAATTTCA
AGCCATTGGACTGGTCCGTGAAAAGAGCCAATAAGAAGAAAAAGATGTCA
TTCACCCCTCATGACCGAAGCAGCTGTTTTTTTAACTACAGAACTATTGA
GTGGTACTTTCTTCGTTTAAATGCCACCAAAGTAGTCTATTTCATTGATG
AATAGTGGTTGCAAAAAATGTTAGACTCTACCACTCACATTGGTTTGGGC
TATAGAGAAAATTCAGAAAGGGACATTGTTACCACAAGTTTTAAGTATTG
TAGTGGAGTCTCTTTAACTCGAACCTCTATAACTCGAATGTCTCCTTAAC
TCGAACAAGTTCCATGGTCCCTTCACTTAAAAATGCCTTGTAAACATTAC
CCCATCACTCAAAATCTCCTTAACTCGAACAAATCTGTGTCCCCCCTGCG
TGTTCGAGTTATGGGAGACTCACTGTCAATACATTTTAAGTAAACTTCAT
GACCGGCTCGAAAAATATGGCATTGGAAAGCGTAGAAATATATCTAAAGG
ACGCCAAGGATCAAAAAAGGTAAACGGACGAAAAAAAGTCCAAAGAAGTA
CGAATTACGTCCAAAGAACATTCATCGTAACTTTTCGGGTGATTTGACGG
TGAAAATTTGCAATGTATTGAAATTTATCATTTTTTTTTACTAAGAATTG
TTGAAATATTGTAGCCTTTCGCCGAGAATTGACCTAAAAAAAGTCACGGT
GAGTTTTTTTCACCGATTTTTCCAATGCTTGAAAAATGACAAAATAATTA
TTAGTTTGGATGAAGAAGAATTTTTTATATAAATAAGCTCTGTGAAAAAA
ATGATGGTTTCAACAGAACGTTACTTCATTGTCTTATGTACAAACGATAA
ATTTTCTCTTATAATAAAACTCGACGACGATATTACAAAAACAATTTCTA
TTTTATATCCTCCTCTCCTAGTCTCTCACATCATTGATTTAAAAGCCTCG
AAGGAACTAGATTTGAAACTCCTGGATGGGAAATGAAGCTACTTACTTAT
TTCCCATCCGTGACCCGTATGGCGCGCCAAAGCGGAAATAAATACTATCT
CTCATTTCGCGACACTATCTTTCATTTCACGACACTATCTCTCATTTTGC
GACACTATCTTTCATTTCACGACACTATCTTTCATTTCGCGACACTATCT
TTCATTTCGCGACACTATCTTTTATTTCGCGACACTATCTTTTATTTTG

Coding sequence (CDS) from alignment at sc0000145:64935..71933-

>TCONS_00012544 ID=TCONS_00012544|Name=TCONS_00012544|organism=Clytia hemisphaerica|type=CDS|length=7920bp|location=Sequence derived from alignment at sc0000145:64935..71933- (Clytia hemisphaerica)
CGCTGTCCGTCATTTGTTGTGTGTGGATGACCCAAGTGCTGACGTATGCA
AATTTCAAGCCATTGGACTGGTCCGTGAAAAGAGCCAATAAGGAGAGTTG
TGGAGAGAGGACAGTATTATTACTTACCGACTTGATACGGAACAAAGGAA
TTGCTGTCGATTGCCATGACGACACTGAATATTACCTTGGACCATACGTT
TTGCCGGAGGTGAACTCCAAAAACATTGATAAAATTGTAATCATTGTGGC
CCATACACTTCATCTAAAGCCTTTTTTGCACAGAAACTTCGTGGCATTGT
TCACATCATTTTGAATGGAACACGACAACATCTTGATGATAAAAACGTCT
ACCCTTCATTCATGCAGAATAGATTTTTGGTCAACAAATTGAGTTGGTGT
GGAACAGAAAAGGATCCTGGGATTGATTTCACACAATGCCCTTGGGAATG
TTCCATTCAAGCACCCTATTGGTCAATTGCTAATAAAAAGGGTTTGTTAT
GGTCTGGTTCTCGAGAAATCTCTCACAAATTTTCCGATTTTCGATACACC
AATCGGTTTATTACACTGGAAGATACATTAGCTGGTTTTCACTCAAGAGC
CTAAGAGAAAGCAAATCACCAATATCCAAAACATTTTAACTTCTTTGAAA
CAACCATCACAATCAATAGTTACTAAGGGAGCAATAAAACAAAATGGTGG
ACCAGTTGTGAAGAGTAAATTTGCGTCAACAAAGAATCTCAAAGAAATTG
TGATCGGAAGATGTTACGAATATATGTTCAAAAGAGACATTCCTGAGAAA
TGGGATTGTGGTCAAATTTGGTCCAAATTTTTCGAGGCGTTTGCATATAA
AGGACCTTGCGACGTCATGCAAAAAGACTATGAAGGGCTTATTGACTACA
TGGATGAAGAAGTTCCTCGGAATAAGATGCTTTGTTGGAAATGTCTTAGT
AGCCTGATTTTCATTTTGGTATTTGTTCTAGCTCAAAAAGCGCTGTCCGT
CATTTGTTGTGTGTGGATGACCCAAGTGCTGACGTATGCAAATTTCAAGC
CATTGGACTGGTCCGTGAAAAGAGCCAATAAGGAGAGTTGTGGAGAGAGG
ACAGTATTATTACTTACCGACTTGATACGGAACAAAGGAATTGCTGTCGA
TTGCCATGACGACACTGAATATTACCTTGGACCATACGTTTTGCCGGAGG
TGAACTCCAAAAACATTGATAAAATTGTAATCATTGTGGCCCATACACTT
CATCTAAAGCCTTTTTTGCACAGAAACTTCGTGGCATTGTTCACATCATT
TTGAATGGAACACGACAACATCTTGATGATAAAAACGTCTACCCTTCATT
CATGCAGAATAGATTTTTGGTCAACAAATTGAGTTGGTGTGGAACAGAAA
AGGATCCTGGGATTGATTTCACACAATGCCCTTGGGAATGTTCCATTCAA
GCACCCTATTGGTCAATTGCTAATAAAAAGGGTTTGTTATGGTCTGGTTC
TCGAGAAATCTCTCACAAATTTTCCGATTTTCGATACACCAATCGGTTTA
TTACACTGGAAGATACATTAGCTGGTTTTCACTCAAGAGCCTAAGAGAAA
GCAAATCACCAATATCCAAAACATTTTAACTTCTTTGAAACAACCATCAC
AATCAATAGTTACTAAGGGAGCAATAAAACAAAATGGTGGACCAGTTGTG
AAGAGTAAATTTGCGTCAACAAAGAATCTCAAAGAAATTGTGATCGGAAG
ATGTTACGAATATATGTTCAAAAGAGACATTCCTGAGAAATGGGATTGTG
GTCAAATTTGGTCCAAATTTTTCGAGGCGTTTGCATATAAAGGACCTTGC
GACGTCATGCAAAAAGACTATGAAGGGCTTATTGACTACATGGATGAAGA
AGTTCCTCGGAATAAGATGCTTTGTTGGAAATGTCTTAGTAGCCTGATTT
TCATTTTGGTATTTGTTCTAGCTCAAAAAGCGCTGTCCGTCATTTGTTGT
GTGTGGATGACCCAAGTGCTGACGTATGCAAATTTCAAGCCATTGGACTG
GTCCGTGAAAAGAGCCAATAAGGAGAGTTGTGGAGAGAGGACAGTATTAT
TACTTACCGACTTGATACGGAACAAAGGAATTGCTGTCGATTGCCATGAC
GACACTGAATATTACCTTGGACCATACGTTTTGCCGGAGGTGAACTCCAA
AAACATTGATAAAATTGTAATCATTGTGGCCCATACACTTCATCTAAAGC
CTTTTTTGCACAGAAACTTCGTGGCATTGTTCACATCATTTTGAATGGAA
CACGACAACATCTTGATGATAAAAACGTCTACCCTTCATTCATGCAGAAT
AGATTTTTGGTCAACAAATTGAGTTGGTGTGGAACAGAAAAGGATCCTGG
GATTGATTTCACACAATGCCCTTGGGAATGTTCCATTCAAGCACCCTATT
GGTCAATTGCTAATAAAAAGGGTTTGTTATGGTCTGGTTCTCGAGAAATC
TCTCACAAATTTTCCGATTTTCGATACACCAATCGGTTTATTACACTGGA
AGATACATTAGCTGGTTTTCACTCAAGAGCCTAAGAGAAAGCAAATCACC
AATATCCAAAACATTTTAACTTCTTTGAAACAACCATCACAATCAATAGT
TACTAAGGGAGCAATAAAACAAAATGGTGGACCAGTTGTGAAGAGTAAAT
TTGCGTCAACAAAGAATCTCAAAGAAATTGTGATCGGAAGATGTTACGAA
TATATGTTCAAAAGAGACATTCCTGAGAAATGGGATTGTGGTCAAATTTG
GTCCAAATTTTTCGAGGCGTTTGCATATAAAGGACCTTGCGACGTCATGC
AAAAAGACTATGAAGGGCTTATTGACTACATGGATGAAGAAGTTCCTCGG
AATAAGATGCTTTGTTGGAAATGTCTTAGTAGCCTGATTTTCATTTTGGT
ATTTGTTCTAGCTCAAAAAGCGCTGTCCGTCATTTGTTGTGTGTGGATGA
CCCAAGTGCTGACGTATGCAAATTTCAAGCCATTGGACTGGTCCGTGAAA
AGAGCCAATAAGGAGAGTTGTGGAGAGAGGACAGTATTATTACTTACCGA
CTTGATACGGAACAAAGGAATTGCTGTCGATTGCCATGACGACACTGAAT
ATTACCTTGGACCATACGTTTTGCCGGAGGTGAACTCCAAAAACATTGAT
AAAATTGTAATCATTGTGGCCCATACACTTCATCTAAAGCCTTTTTTGCA
CAGAAACTTCGTGGCATTGTTCACATCATTTTGAATGGAACACGACAACA
TCTTGATGATAAAAACGTCTACCCTTCATTCATGCAGAATAGATTTTTGG
TCAACAAATTGAGTTGGTGTGGAACAGAAAAGGATCCTGGGATTGATTTC
ACACAATGCCCTTGGGAATGTTCCATTCAAGCACCCTATTGGTCAATTGC
TAATAAAAAGGGTTTGTTATGGTCTGGTTCTCGAGAAATCTCTCACAAAT
TTTCCGATTTTCGATACACCAATCGGTTTATTACACTGGAAGATACATTA
GCTGGTTTTCACTCAAGAGCCTAAGAGAAAGCAAATCACCAATATCCAAA
ACATTTTAACTTCTTTGAAACAACCATCACAATCAATAGTTACTAAGGGA
GCAATAAAACAAAATGGTGGACCAGTTGTGAAGAGTAAATTTGCGTCAAC
AAAGAATCTCAAAGAAATTGTGATCGGAAGATGTTACGAATATATGTTCA
AAAGAGACATTCCTGAGAAATGGGATTGTGGTCAAATTTGGTCCAAATTT
TTCGAGGCGTTTGCATATAAAGGACCTTGCGACGTCATGCAAAAAGACTA
TGAAGGGCTTATTGACTACATGGATGAAGAAGTTCCTCGGAATAAGATGC
TTTGTTGGAAATGTCTTAGTAGCCTGATTTTCATTTTGGTATTTGTTCTA
GCTCAAAAAGCGCTGTCCGTCATTTGTTGTGTGTGGATGACCCAAGTGCT
GACGTATGCAAATTTCAAGCCATTGGACTGGTCCGTGAAAAGAGCCAATA
AGGAGAGTTGTGGAGAGAGGACAGTATTATTACTTACCGACTTGATACGG
AACAAAGGAATTGCTGTCGATTGCCATGACGACACTGAATATTACCTTGG
ACCATACGTTTTGCCGGAGGTGAACTCCAAAAACATTGATAAAATTGTAA
TCATTGTGGCCCATACACTTCATCTAAAGCCTTTTTTGCACAGAAACTTC
GTGGCATTGTTCACATCATTTTGAATGGAACACGACAACATCTTGATGAT
AAAAACGTCTACCCTTCATTCATGCAGAATAGATTTTTGGTCAACAAATT
GAGTTGGTGTGGAACAGAAAAGGATCCTGGGATTGATTTCACACAATGCC
CTTGGGAATGTTCCATTCAAGCACCCTATTGGTCAATTGCTAATAAAAAG
GGTTTGTTATGGTCTGGTTCTCGAGAAATCTCTCACAAATTTTCCGATTT
TCGATACACCAATCGGTTTATTACACTGGAAGATACATTAGCTGGTTTTC
ACTCAAGAGCCTAAGAGAAAGCAAATCACCAATATCCAAAACATTTTAAC
TTCTTTGAAACAACCATCACAATCAATAGTTACTAAGGGAGCAATAAAAC
AAAATGGTGGACCAGTTGTGAAGAGTAAATTTGCGTCAACAAAGAATCTC
AAAGAAATTGTGATCGGAAGATGTTACGAATATATGTTCAAAAGAGACAT
TCCTGAGAAATGGGATTGTGGTCAAATTTGGTCCAAATTTTTCGAGGCGT
TTGCATATAAAGGACCTTGCGACGTCATGCAAAAAGACTATGAAGGGCTT
ATTGACTACATGGATGAAGAAGTTCCTCGGAATAAGATGCTTTGTTGGAA
ATGTCTTAGTAGCCTGATTTTCATTTTGGTATTTGTTCTAGCTCAAAAAG
CGCTGTCCGTCATTTGTTGTGTGTGGATGACCCAAGTGCTGACGTATGCA
AATTTCAAGCCATTGGACTGGTCCGTGAAAAGAGCCAATAAGGAGAGTTG
TGGAGAGAGGACAGTATTATTACTTACCGACTTGATACGGAACAAAGGAA
TTGCTGTCGATTGCCATGACGACACTGAATATTACCTTGGACCATACGTT
TTGCCGGAGGTGAACTCCAAAAACATTGATAAAATTGTAATCATTGTGGC
CCATACACTTCATCTAAAGCCTTTTTTGCACAGAAACTTCGTGGCATTGT
TCACATCATTTTGAATGGAACACGACAACATCTTGATGATAAAAACGTCT
ACCCTTCATTCATGCAGAATAGATTTTTGGTCAACAAATTGAGTTGGTGT
GGAACAGAAAAGGATCCTGGGATTGATTTCACACAATGCCCTTGGGAATG
TTCCATTCAAGCACCCTATTGGTCAATTGCTAATAAAAAGGGTTTGTTAT
GGTCTGGTTCTCGAGAAATCTCTCACAAATTTTCCGATTTTCGATACACC
AATCGGTTTATTACACTGGAAGATACATTAGCTGGTTTTCACTCAAGAGC
CTAAGAGAAAGCAAATCACCAATATCCAAAACATTTTAACTTCTTTGAAA
CAACCATCACAATCAATAGTTACTAAGGGAGCAATAAAACAAAATGGTGG
ACCAGTTGTGAAGAGTAAATTTGCGTCAACAAAGAATCTCAAAGAAATTG
TGATCGGAAGATGTTACGAATATATGTTCAAAAGAGACATTCCTGAGAAA
TGGGATTGTGGTCAAATTTGGTCCAAATTTTTCGAGGCGTTTGCATATAA
AGGACCTTGCGACGTCATGCAAAAAGACTATGAAGGGCTTATTGACTACA
TGGATGAAGAAGTTCCTCGGAATAAGATGCTTTGTTGGAAATGTCTTAGT
AGCCTGATTTTCATTTTGGTATTTGTTCTAGCTCAAAAAGCGCTGTCCGT
CATTTGTTGTGTGTGGATGACCCAAGTGCTGACGTATGCAAATTTCAAGC
CATTGGACTGGTCCGTGAAAAGAGCCAATAAGGAGAGTTGTGGAGAGAGG
ACAGTATTATTACTTACCGACTTGATACGGAACAAAGGAATTGCTGTCGA
TTGCCATGACGACACTGAATATTACCTTGGACCATACGTTTTGCCGGAGG
TGAACTCCAAAAACATTGATAAAATTGTAATCATTGTGGCCCATACACTT
CATCTAAAGCCTTTTTTGCACAGAAACTTCGTGGCATTGTTCACATCATT
TTGAATGGAACACGACAACATCTTGATGATAAAAACGTCTACCCTTCATT
CATGCAGAATAGATTTTTGGTCAACAAATTGAGTTGGTGTGGAACAGAAA
AGGATCCTGGGATTGATTTCACACAATGCCCTTGGGAATGTTCCATTCAA
GCACCCTATTGGTCAATTGCTAATAAAAAGGGTTTGTTATGGTCTGGTTC
TCGAGAAATCTCTCACAAATTTTCCGATTTTCGATACACCAATCGGTTTA
TTACACTGGAAGATACATTAGCTGGTTTTCACTCAAGAGCCTAAGAGAAA
GCAAATCACCAATATCCAAAACATTTTAACTTCTTTGAAACAACCATCAC
AATCAATAGTTACTAAGGGAGCAATAAAACAAAATGGTGGACCAGTTGTG
AAGAGTAAATTTGCGTCAACAAAGAATCTCAAAGAAATTGTGATCGGAAG
ATGTTACGAATATATGTTCAAAAGAGACATTCCTGAGAAATGGGATTGTG
GTCAAATTTGGTCCAAATTTTTCGAGGCGTTTGCATATAAAGGACCTTGC
GACGTCATGCAAAAAGACTATGAAGGGCTTATTGACTACATGGATGAAGA
AGTTCCTCGGAATAAGATGCTTTGTTGGAAATGTCTTAGTAGCCTGATTT
TCATTTTGGTATTTGTTCTAGCTCAAAAAGCGCTGTCCGTCATTTGTTGT
GTGTGGATGACCCAAGTGCTGACGTATGCAAATTTCAAGCCATTGGACTG
GTCCGTGAAAAGAGCCAATAAGGAGAGTTGTGGAGAGAGGACAGTATTAT
TACTTACCGACTTGATACGGAACAAAGGAATTGCTGTCGATTGCCATGAC
GACACTGAATATTACCTTGGACCATACGTTTTGCCGGAGGTGAACTCCAA
AAACATTGATAAAATTGTAATCATTGTGGCCCATACACTTCATCTAAAGC
CTTTTTTGCACAGAAACTTCGTGGCATTGTTCACATCATTTTGAATGGAA
CACGACAACATCTTGATGATAAAAACGTCTACCCTTCATTCATGCAGAAT
AGATTTTTGGTCAACAAATTGAGTTGGTGTGGAACAGAAAAGGATCCTGG
GATTGATTTCACACAATGCCCTTGGGAATGTTCCATTCAAGCACCCTATT
GGTCAATTGCTAATAAAAAGGGTTTGTTATGGTCTGGTTCTCGAGAAATC
TCTCACAAATTTTCCGATTTTCGATACACCAATCGGTTTATTACACTGGA
AGATACATTAGCTGGTTTTCACTCAAGAGCCTAAGAGAAAGCAAATCACC
AATATCCAAAACATTTTAACTTCTTTGAAACAACCATCACAATCAATAGT
TACTAAGGGAGCAATAAAACAAAATGGTGGACCAGTTGTGAAGAGTAAAT
TTGCGTCAACAAAGAATCTCAAAGAAATTGTGATCGGAAGATGTTACGAA
TATATGTTCAAAAGAGACATTCCTGAGAAATGGGATTGTGGTCAAATTTG
GTCCAAATTTTTCGAGGCGTTTGCATATAAAGGACCTTGCGACGTCATGC
AAAAAGACTATGAAGGGCTTATTGACTACATGGATGAAGAAGTTCCTCGG
AATAAGATGCTTTGTTGGAAATGTCTTAGTAGCCTGATTTTCATTTTGGT
ATTTGTTCTAGCTCAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007038XLOC_007038Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012544-exon-sc0000145-1575043694:71716..71933TCONS_00012544-exon-sc0000145-1575043694:71716..71933Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1575043694:71167..71507TCONS_00012544-exon-sc0000145-1575043694:71167..71507Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1575043694:70672..70766TCONS_00012544-exon-sc0000145-1575043694:70672..70766Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1575043694:68613..68730TCONS_00012544-exon-sc0000145-1575043694:68613..68730Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1575043694:68179..68276TCONS_00012544-exon-sc0000145-1575043694:68179..68276Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1575043694:67389..67484TCONS_00012544-exon-sc0000145-1575043694:67389..67484Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1575043694:66470..66556TCONS_00012544-exon-sc0000145-1575043694:66470..66556Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1575043694:64935..66190TCONS_00012544-exon-sc0000145-1575043694:64935..66190Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1510915933:71716..71933TCONS_00012544-exon-sc0000145-1510915933:71716..71933Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1510915933:71167..71507TCONS_00012544-exon-sc0000145-1510915933:71167..71507Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1510915933:70672..70766TCONS_00012544-exon-sc0000145-1510915933:70672..70766Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1510915933:68613..68730TCONS_00012544-exon-sc0000145-1510915933:68613..68730Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1510915933:68179..68276TCONS_00012544-exon-sc0000145-1510915933:68179..68276Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1510915933:67389..67484TCONS_00012544-exon-sc0000145-1510915933:67389..67484Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1510915933:66470..66556TCONS_00012544-exon-sc0000145-1510915933:66470..66556Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1510915933:64935..66190TCONS_00012544-exon-sc0000145-1510915933:64935..66190Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1491911889:71716..71933TCONS_00012544-exon-sc0000145-1491911889:71716..71933Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1491911889:71167..71507TCONS_00012544-exon-sc0000145-1491911889:71167..71507Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1491911889:70672..70766TCONS_00012544-exon-sc0000145-1491911889:70672..70766Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1491911889:68613..68730TCONS_00012544-exon-sc0000145-1491911889:68613..68730Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1491911889:68179..68276TCONS_00012544-exon-sc0000145-1491911889:68179..68276Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1491911889:67389..67484TCONS_00012544-exon-sc0000145-1491911889:67389..67484Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1491911889:66470..66556TCONS_00012544-exon-sc0000145-1491911889:66470..66556Clytia hemisphaericaexon
TCONS_00012544-exon-sc0000145-1491911889:64935..66190TCONS_00012544-exon-sc0000145-1491911889:64935..66190Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012544-proteinTCONS_00012544-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000145supercontigsc0000145:64935..71933 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.45008	4.47431	6.22871	2.70883	1.80936	4.81731	5.35741	5.00213	4.33563	4.27697	7.50433	7.93208	5.36446	0	0	4.90019	4.83052	3.25195	3.42276	1.81385	4.85645	1.73739	1.23613	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003193ADP-ribosyl_cyclase
Vocabulary: Molecular Function
TermDefinition
GO:0003953NAD+ nucleosidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003953 NAD+ nucleosidase activity
Blast
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BLAST of TCONS_00012544 vs. Swiss-Prot (Human)
Match: BST1 (ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 OS=Homo sapiens GN=BST1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.485e-32
Identity = 77/266 (28.95%), Postives = 133/266 (50.00%), Query Frame = 2 
Query:  356 ASTKNLKEIVIGRCYEYMFKRDIPEKWD--CGQIWSKFFEAFAYKGPCDVMQKDYEGLIDYMDEEVPRNKGLLWSGSREISHKFSDFRYTNRFITLEDTLAGFLVNKLSWCGTEKDPGIDFTQCP----WECSIQAPYWSIANKKFAQKLRGIVHIILNGTRQHLDDKNVYPSFMQNRYYLGPYVLPEVNSKNIDKIVIIVAHTLHLKPLESCGERTVLLLTDLIRNKGIAVDCHDDTDAVRHLLCVDDPSADVCKFQAIGLVREK 1135
             ++ +L++I +GRC EY      PE+ +  C  IW  F  A   K PC V+  DY+  I+     +PR+K L W  S  + + F+D   T RF+ L D L G + + LSWC  + D G+D+  CP     E +    +W  A+ ++++   G++H++LNG+    +    YP     + +   Y +P +  + I +I I V H +    +ESCGE ++ +L   +++ G    C +D   V+ L CVD  +   C  ++     ++
Sbjct:   38 GTSAHLRDIFLGRCAEYRALLS-PEQRNKNCTAIWEAFKVALD-KDPCSVLPSDYDLFINLSRHSIPRDKSLFWENSHLLVNSFAD--NTRRFMPLSDVLYGRVADFLSWCRQKNDSGLDYQSCPTSEDCENNPVDSFWKRASIQYSKDSSGVIHVMLNGS----EPTGAYPI----KGFFADYEIPNLQKEKITRIEIWVMHEIGGPNVESCGEGSMKVLEKRLKDMGFQYSCINDYRPVKLLQCVDHSTHPDCALKSAAAATQR 291
The following BLAST results are available for this feature:
BLAST of TCONS_00012544 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BST11.485e-3228.95ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 ... [more]
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