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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012576 ID=TCONS_00012576|Name=TCONS_00012576|organism=Clytia hemisphaerica|type=transcript|length=2217bp
ttggttgatattgataTCCAAACATCATTCAAAATCTGTAAACATATTTG
TTGTAATTGTTGTACATACTCAATAAAAGCATTCGATTTACACATCAGCA
ACGCTGCTTGCACTGTTTCGAGATTTTGCGTGTATTCACACTAAAAGTTT
CAAGCTACaagaaaaagctgaaaagtatCAAGTCGTgccacttctataga
aagaaagttcgtgcgtgtgtttcactaaatttgcaaaaacGAAAAGGAAA
ACCCAAACATGGAAGCGaccaaaaagcaaacaaaatacGATGAAGGAGAA
AACAACCAAGATTTcgaaaaggagaaagaaaaaacaaacggAGAACACAT
TGAACCAGCTTCAAAGGGTGTGGTTTTCTTATTCTGTTTTATGTTATTCA
CTAAAGGAATCACAGCGTGTATTTTCCGGTCCACAAATTATTTCTTCATT
CTCCACATCTTGGATGGGAACGTGAAAACAGCAAATTATGCTCTTACAAC
TTTGTATACTGTTGAAGCTATTGTGAATTTTATTGGTGTCTTTGCGTGCG
GAGTTCTAATAGATAGCCAAAAACTGAAACTTAAAACGATCATGCAGCTA
TTTACAATCATTCATACATTGGGCTTTGTCTTCATGTTTTTTCCGAAtat
ttatttgttgttttttggaaATTGTTGTCGAGAGTTTGGCGCAGGATACA
CAATAGTAGTCAAAGTCAAATTAACTTTCAGTAAAAAGCAATCATCAATG
GCTTTAGTGTGTACGGTATTCGCTAAGATCATGGGTATTATCGTCGGGTC
TTTATTAGCAATGTTTGTATTAACGAAAATCGAATTCCAAATTGgagatt
ttgatgtttggtacGGTAATTTTCCATGTTTCATTTCGTTCAGTTTATAC
TGTATAATTCTGATTCTATGCTCCTATCTTGTGACTGATAAAGACGACCC
GATCTAAATCTTGAAGCGAATGAAAAACAAGAAGAATGATAAAATCGACA
ATACGTTCATCCAACGCGTTTTCAAATTATGCCAAGATATAGCATACATG
ATCCTGCTTGCTTACAGCACTTATTTCTACACGGTGACAACATCATATGA
AAACTATAGAGCTATCAATTATTCACAATGTTATGATTTCGGTGCGCAGT
GGCTTGGTGCTATGTTACTGGTTGCTTACACTGCTAAATTATGTTTCATG
CCGTTATTCAAGATTATCATTGACTATGCATACAAAATTGATATAATGAT
TGCGATGNAAAATTGGAGATTTGGATGTTTGGTACGGTAATTTTCCATGT
TTCATTTCGTTCAGTTTATACTGTATAATTCTGATTCTATGCTCCTATCT
TGTGACTGATGAGGACGACCCGATCCAAATCTTGAAGcgaatgaaaaaga
agaagaatgaTAAAATCGACAATACGTTCATCCAACGCGTTTTCGAATTA
TGCCAAGATATAGCATACATGATCCTGCTTGCTTACAGCACTTATTTCTA
CACGGTGACAACATCATATGAAAACTATAGAGCTATCAATTATTCACAAT
GTTATGATTTCGGTGCGCAGTGGCTTGGTGCTATGTTACTGGTTGCTTAC
ACTGCTAAATTATGTTTCATGCCGTTATTCAAGATTATCATTGACTATGC
ATACAAAATTGATATAATGATTGCGATGATGGTACCTTATATAGTATTCA
GTTTGACACAAATATCGGTTAGCAGTCTATTTTGTGACTCCTTTCTCTTG
AATGATATGTTTGTGAAGATTATTTTCACTGCCGGATATCAGATCCCGCC
CACTATACTCATAGGGCGGCTGGTGTCTCATGAAATGAAGGGTACCGCCC
AATCACTTTGTACCATATCCCAAAAACTAAGTGGAATTTTAATCTCGACT
TTAGGAGCGATTTTTGTGAACAATCAAAAACCTTTTTGGATTGGACAAAT
GGTGATTGGTTTATTTTTGGTTACCATGGCAATATGGAAACGGCGTTTGT
TTATCAATATTTGAGagagaatcttcaatactggtCAATTTTTCTAGACT
ATAGCTAGCCTTTTTTTCTAGGTATTGAGTGACTCTTGATGAAGCCCTCT
AAATAGACCATTACTAATTTAgtaatacagggtgtccctaattaaagtat
caagtttgaacatgcgattgagtagaaaagtttgtgtgtgttatcgctaa
aatataagaacgttctc Run BLAST on NCBI transcript from alignment at sc0000145:500917..503133- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012576 ID=TCONS_00012576|Name=TCONS_00012576|organism=Clytia hemisphaerica|type=transcript|length=2217bp|location=Sequence derived from alignment at sc0000145:500917..503133- (Clytia hemisphaerica)
TTGGTTGATATTGATATCCAAACATCATTCAAAATCTGTAAACATATTTG
TTGTAATTGTTGTACATACTCAATAAAAGCATTCGATTTACACATCAGCA
ACGCTGCTTGCACTGTTTCGAGATTTTGCGTGTATTCACACTAAAAGTTT
CAAGCTACAAGAAAAAGCTGAAAAGTATCAAGTCGTGCCACTTCTATAGA
AAGAAAGTTCGTGCGTGTGTTTCACTAAATTTGCAAAAACGAAAAGGAAA
ACCCAAACATGGAAGCGACCAAAAAGCAAACAAAATACGATGAAGGAGAA
AACAACCAAGATTTCGAAAAGGAGAAAGAAAAAACAAACGGAGAACACAT
TGAACCAGCTTCAAAGGGTGTGGTTTTCTTATTCTGTTTTATGTTATTCA
CTAAAGGAATCACAGCGTGTATTTTCCGGTCCACAAATTATTTCTTCATT
CTCCACATCTTGGATGGGAACGTGAAAACAGCAAATTATGCTCTTACAAC
TTTGTATACTGTTGAAGCTATTGTGAATTTTATTGGTGTCTTTGCGTGCG
GAGTTCTAATAGATAGCCAAAAACTGAAACTTAAAACGATCATGCAGCTA
TTTACAATCATTCATACATTGGGCTTTGTCTTCATGTTTTTTCCGAATAT
TTATTTGTTGTTTTTTGGAAATTGTTGTCGAGAGTTTGGCGCAGGATACA
CAATAGTAGTCAAAGTCAAATTAACTTTCAGTAAAAAGCAATCATCAATG
GCTTTAGTGTGTACGGTATTCGCTAAGATCATGGGTATTATCGTCGGGTC
TTTATTAGCAATGTTTGTATTAACGAAAATCGAATTCCAAATTGGAGATT
TTGATGTTTGGTACGGTAATTTTCCATGTTTCATTTCGTTCAGTTTATAC
TGTATAATTCTGATTCTATGCTCCTATCTTGTGACTGATAAAGACGACCC
GATCTAAATCTTGAAGCGAATGAAAAACAAGAAGAATGATAAAATCGACA
ATACGTTCATCCAACGCGTTTTCAAATTATGCCAAGATATAGCATACATG
ATCCTGCTTGCTTACAGCACTTATTTCTACACGGTGACAACATCATATGA
AAACTATAGAGCTATCAATTATTCACAATGTTATGATTTCGGTGCGCAGT
GGCTTGGTGCTATGTTACTGGTTGCTTACACTGCTAAATTATGTTTCATG
CCGTTATTCAAGATTATCATTGACTATGCATACAAAATTGATATAATGAT
TGCGATGNAAAATTGGAGATTTGGATGTTTGGTACGGTAATTTTCCATGT
TTCATTTCGTTCAGTTTATACTGTATAATTCTGATTCTATGCTCCTATCT
TGTGACTGATGAGGACGACCCGATCCAAATCTTGAAGCGAATGAAAAAGA
AGAAGAATGATAAAATCGACAATACGTTCATCCAACGCGTTTTCGAATTA
TGCCAAGATATAGCATACATGATCCTGCTTGCTTACAGCACTTATTTCTA
CACGGTGACAACATCATATGAAAACTATAGAGCTATCAATTATTCACAAT
GTTATGATTTCGGTGCGCAGTGGCTTGGTGCTATGTTACTGGTTGCTTAC
ACTGCTAAATTATGTTTCATGCCGTTATTCAAGATTATCATTGACTATGC
ATACAAAATTGATATAATGATTGCGATGATGGTACCTTATATAGTATTCA
GTTTGACACAAATATCGGTTAGCAGTCTATTTTGTGACTCCTTTCTCTTG
AATGATATGTTTGTGAAGATTATTTTCACTGCCGGATATCAGATCCCGCC
CACTATACTCATAGGGCGGCTGGTGTCTCATGAAATGAAGGGTACCGCCC
AATCACTTTGTACCATATCCCAAAAACTAAGTGGAATTTTAATCTCGACT
TTAGGAGCGATTTTTGTGAACAATCAAAAACCTTTTTGGATTGGACAAAT
GGTGATTGGTTTATTTTTGGTTACCATGGCAATATGGAAACGGCGTTTGT
TTATCAATATTTGAGAGAGAATCTTCAATACTGGTCAATTTTTCTAGACT
ATAGCTAGCCTTTTTTTCTAGGTATTGAGTGACTCTTGATGAAGCCCTCT
AAATAGACCATTACTAATTTAGTAATACAGGGTGTCCCTAATTAAAGTAT
CAAGTTTGAACATGCGATTGAGTAGAAAAGTTTGTGTGTGTTATCGCTAA
AATATAAGAACGTTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012576-exon-sc0000145-1575043694:500917..503133 | TCONS_00012576-exon-sc0000145-1575043694:500917..503133 | Clytia hemisphaerica | exon |
| TCONS_00012576-exon-sc0000145-1510915933:500917..503133 | TCONS_00012576-exon-sc0000145-1510915933:500917..503133 | Clytia hemisphaerica | exon |
| TCONS_00012576-exon-sc0000145-1491911889:500917..503133 | TCONS_00012576-exon-sc0000145-1491911889:500917..503133 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145 | supercontig | sc0000145:500917..503133 - |
Blast
The following BLAST results are available for this feature:
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