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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012584 ID=TCONS_00012584|Name=TCONS_00012584|organism=Clytia hemisphaerica|type=transcript|length=1937bp
aaaGAATATGACATGACTCTGTTCCGAGAACTCCTGGAGGAGTCAACAAA
GTCACCCTCAAAGTCTGCATGACAAATATCTTAaatcatgaagaatttac
acatcGCCGTTGGCAAATCAAAAGGTCCAACCTCAAAATTAATGCATGAG
AAAACTAAGAATTTTTATGTTTGTCTGAGCATAAATTTTGAGAGTAACCC
TGTTTCATGTAGATGGAACCTTCCTCACCATGCAAAATGGGCCAATTTCA
AATTTAAGGCTAGCTAGACAGAAAAGCTCTTAGCTTTCTCAGACACTAAT
TTTGTGATTGGcccttttgatttgtcaacaGCGACATGCAGGTGAGTATC
AtggaagatttcacaatcaacaAACGGAAAAAGATGAAGGAGATAACTGA
AGAAGCAAAGAAACTTAATAAAGACAATAACAATAAAGGATTCAACTTGt
gcgtaagaggaagcccaagaacaaaactatgcatcgttaaaaaattacaa
aaccaaacaaaaatatcttcaaattataaaccaaaataCACCACAAGATC
TCGTCAGCGATTGGGTTTCAACAGATtatgatgaatgattcattttgtaa
aataggcagtcaAACTTTATTAGCTTAATTAAGTTAGtacagaattttga
aattttatataaTACATTTACTGCACATCAACATCAACATTACAGTACAT
AGTAGTTTTGGCAGTAAtatgaattgttttttttaataatggtaGCAAAT
gaaatttatcagaaaatattttcagaagtTTCTTTACATGAAATTAATAA
TTACatcagaaataaaatattttcatatggTTTCAATGAAAAAGGTGCTC
CATCTGGGAATATGTGCCCCTTCCTCTATTTGCTTGCTTTTAAAAAGAAG
CAGGTGATTTTGGATGTTTGTATAAATCAATAACCAGGTGATAAGGAAGA
GATATTCATCATACTGTTGGATTGGTGCTTTCAATATACAtaatatttct
taatttttcaaaagttcgtgaaaatcagaaattttcttttctatattcga
ggaaaattgaaaaattttagctttaaaaGATAGACATTCAGAGATGTCGC
ATATTTTGGTTAATGTACACAAAGACAAGGCAGAAATCTCCAAAACTGGT
CATAAACTTAAGGAAATAGCAAAACTCATTGAACCAAGAAGAGCAGTCAT
CAAAGAATTTTATGAACAAAATCTTATAGATATGAATACTAAAGTGAACA
agccaaagaaaaagaaatcagcaaaaattgTGAAATCTGCAATATTGATA
CCCATCGTTCTCTGTCCTGATAATGAGCTGAAGGTTTTATTAACAGTCCG
GACTAATAGGGTTTCCATAAGCAAAAATGAGGTTTCCTTCCCTGGAGGAA
AATGGGAGAGGAATGATGAGTCTTTAATAACAACAGCTCTTAGAGAAAGT
TATGAAGAGATTGGTTTACATGCTGACAATATTGACCATATCACTGAGTT
TGTAACACTATCAACTTATCGTAGAGGGAAAATATACAATGTATACTCTA
TTATTGGACTTTTGAAGAGTAGTTTCTATGCTAAACTGAATCGTAAAGAA
GTACAAGATGTACTATTAGTTCCACTTTCCAGTATGGCTCATACTCACGA
GTACAGAACAAACAACATCCCGTATCTTGCCACTCAGGGTCTAGTGATGC
AACACACAacatttaaaatctttggacTGTCTTACGCTTTCTTAGGTTTG
TTTTATCTTTTAGCGACTCCTAGTTATAAAGAAACTGAATATTATCGATA
TTTGGAATCAAGAAATGGTACTTCCTTTGTAGCAACAATGATATGGAAAA
TGATGGAGCTTGTCAATGAATTGCTTGTGTCTAAACTTTAAATGAATTAT
CAAagttataaaatatattttcctctgaatattctat Run BLAST on NCBI protein sequence of TCONS_00012584-protein >TCONS_00012584-protein ID=TCONS_00012584-protein|Name=TCONS_00012584-protein|organism=Clytia hemisphaerica|type=polypeptide|length=265bp
MSHILVNVHKDKAEISKTGHKLKEIAKLIEPRRAVIKEFYEQNLIDMNTK
VNKPKKKKSAKIVKSAILIPIVLCPDNELKVLLTVRTNRVSISKNEVSFP
GGKWERNDESLITTALRESYEEIGLHADNIDHITEFVTLSTYRRGKIYNV
YSIIGLLKSSFYAKLNRKEVQDVLLVPLSSMAHTHEYRTNNIPYLATQGL
VMQHTTFKIFGLSYAFLGLFYLLATPSYKETEYYRYLESRNGTSFVATMI
WKMMELVNELLVSKL Run BLAST on NCBI transcript from alignment at sc0000145:243378..245314 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012584 ID=TCONS_00012584|Name=TCONS_00012584|organism=Clytia hemisphaerica|type=transcript|length=1937bp|location=Sequence derived from alignment at sc0000145:243378..245314 (Clytia hemisphaerica)
atagaatattcagaggaaaatatattttataactTTGATAATTCATTTAA
AGTTTAGACACAAGCAATTCATTGACAAGCTCCATCATTTTCCATATCAT
TGTTGCTACAAAGGAAGTACCATTTCTTGATTCCAAATATCGATAATATT
CAGTTTCTTTATAACTAGGAGTCGCTAAAAGATAAAACAAACCTAAGAAA
GCGTAAGACAgtccaaagattttaaatgtTGTGTGTTGCATCACTAGACC
CTGAGTGGCAAGATACGGGATGTTGTTTGTTCTGTACTCGTGAGTATGAG
CCATACTGGAAAGTGGAACTAATAGTACATCTTGTACTTCTTTACGATTC
AGTTTAGCATAGAAACTACTCTTCAAAAGTCCAATAATAGAGTATACATT
GTATATTTTCCCTCTACGATAAGTTGATAGTGTTACAAACTCAGTGATAT
GGTCAATATTGTCAGCATGTAAACCAATCTCTTCATAACTTTCTCTAAGA
GCTGTTGTTATTAAAGACTCATCATTCCTCTCCCATTTTCCTCCAGGGAA
GGAAACCTCATTTTTGCTTATGGAAACCCTATTAGTCCGGACTGTTAATA
AAACCTTCAGCTCATTATCAGGACAGAGAACGATGGGTATCAATATTGCA
GATTTCAcaatttttgctgatttctttttctttggctTGTTCACTTTAGT
ATTCATATCTATAAGATTTTGTTCATAAAATTCTTTGATGACTGCTCTTC
TTGGTTCAATGAGTTTTGCTATTTCCTTAAGTTTATGACCAGTTTTGGAG
ATTTCTGCCTTGTCTTTGTGTACATTAACCAAAATATGCGACATCTCTGA
ATGTCTATCttttaaagctaaaatttttcaattttcctcgaatatagaaa
agaaaatttctgattttcacgaacttttgaaaaattaagaaatattaTGT
ATATTGAAAGCACCAATCCAACAGTATGATGAATATCTCTTCCTTATCAC
CTGGTTATTGATTTATACAAACATCCAAAATCACCTGCTTCTTTTTAAAA
GCAAGCAAATAGAGGAAGGGGCACATATTCCCAGATGGAGCACCTTTTTC
ATTGAAAccatatgaaaatattttatttctgatGTAATTATTAATTTCAT
GTAAAGAAacttctgaaaatattttctgataaatttcATTTGCtaccatt
attaaaaaaaacaattcataTTACTGCCAAAACTACTATGTACTGTAATG
TTGATGTTGATGTGCAGTAAATGTAttatataaaatttcaaaattctgta
CTAACTTAATTAAGCTAATAAAGTTtgactgcctattttacaaaatgaat
cattcatcataATCTGTTGAAACCCAATCGCTGACGAGATCTTGTGGTGt
attttggtttataatttgaagatatttttgtttggttttgtaatttttta
acgatgcatagttttgttcttgggcttcctcttacgcaCAAGTTGAATCC
TTTATTGTTATTGTCTTTATTAAGTTTCTTTGCTTCTTCAGTTATCTCCT
TCATCTTTTTCCGTTtgttgattgtgaaatcttccaTGATACTCACCTGC
ATGTCGCtgttgacaaatcaaaagggCCAATCACAAAATTAGTGTCTGAG
AAAGCTAAGAGCTTTTCTGTCTAGCTAGCCTTAAATTTGAAATTGGCCCA
TTTTGCATGGTGAGGAAGGTTCCATCTACATGAAACAGGGTTACTCTCAA
AATTTATGCTCAGACAAACATAAAAATTCTTAGTTTTCTCATGCATTAAT
TTTGAGGTTGGACCTTTTGATTTGCCAACGGCgatgtgtaaattcttcat
gattTAAGATATTTGTCATGCAGACTTTGAGGGTGACTTTGTTGACTCCT
CCAGGAGTTCTCGGAACAGAGTCATGTCATATTCttt Coding sequence (CDS) from alignment at sc0000145:243378..245314 >TCONS_00012584 ID=TCONS_00012584|Name=TCONS_00012584|organism=Clytia hemisphaerica|type=CDS|length=798bp|location=Sequence derived from alignment at sc0000145:243378..245314 (Clytia hemisphaerica)
TTAAAGTTTAGACACAAGCAATTCATTGACAAGCTCCATCATTTTCCATA
TCATTGTTGCTACAAAGGAAGTACCATTTCTTGATTCCAAATATCGATAA
TATTCAGTTTCTTTATAACTAGGAGTCGCTAAAAGATAAAACAAACCTAA
GAAAGCGTAAGACAgtccaaagattttaaatgtTGTGTGTTGCATCACTA
GACCCTGAGTGGCAAGATACGGGATGTTGTTTGTTCTGTACTCGTGAGTA
TGAGCCATACTGGAAAGTGGAACTAATAGTACATCTTGTACTTCTTTACG
ATTCAGTTTAGCATAGAAACTACTCTTCAAAAGTCCAATAATAGAGTATA
CATTGTATATTTTCCCTCTACGATAAGTTGATAGTGTTACAAACTCAGTG
ATATGGTCAATATTGTCAGCATGTAAACCAATCTCTTCATAACTTTCTCT
AAGAGCTGTTGTTATTAAAGACTCATCATTCCTCTCCCATTTTCCTCCAG
GGAAGGAAACCTCATTTTTGCTTATGGAAACCCTATTAGTCCGGACTGTT
AATAAAACCTTCAGCTCATTATCAGGACAGAGAACGATGGGTATCAATAT
TGCAGATTTCAcaatttttgctgatttctttttctttggctTGTTCACTT
TAGTATTCATATCTATAAGATTTTGTTCATAAAATTCTTTGATGACTGCT
CTTCTTGGTTCAATGAGTTTTGCTATTTCCTTAAGTTTATGACCAGTTTT
GGAGATTTCTGCCTTGTCTTTGTGTACATTAACCAAAATATGCGACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012584-exon-sc0000145-1491911889:243378..245314 | TCONS_00012584-exon-sc0000145-1491911889:243378..245314 | Clytia hemisphaerica | exon |
| TCONS_00012584-exon-sc0000145-1510915933:243378..245314 | TCONS_00012584-exon-sc0000145-1510915933:243378..245314 | Clytia hemisphaerica | exon |
| TCONS_00012584-exon-sc0000145-1575043694:243378..245314 | TCONS_00012584-exon-sc0000145-1575043694:243378..245314 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000145 | supercontig | sc0000145:243378..245314 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000086 | NUDIX_hydrolase_dom |
| IPR015797 | NUDIX_hydrolase_dom-like |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0016787 |
hydrolase activity |
Blast
The following BLAST results are available for this feature:
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