TCONS_00012586 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012586
Unique NameTCONS_00012586
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012586 ID=TCONS_00012586|Name=TCONS_00012586|organism=Clytia hemisphaerica|type=transcript|length=166bp
ttaaaaatcacaagactttctatttttttattaacCTTCTGTTTCTAATT
TTTACATATTCAATATACTTAGTTCAGTATACTTcagtttgatttgatga
tattcATCTGTCCAGCTCATTGAGCCCAACACGTGTAATTTGATAGAAAA
GAGCATTCGATTCAGC
Run BLAST on NCBI

transcript from alignment at sc0000145:254731..254896

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012586 ID=TCONS_00012586|Name=TCONS_00012586|organism=Clytia hemisphaerica|type=transcript|length=166bp|location=Sequence derived from alignment at sc0000145:254731..254896 (Clytia hemisphaerica)
GCTGAATCGAATGCTCTTTTCTATCAAATTACACGTGTTGGGCTCAATGA
GCTGGACAGATgaatatcatcaaatcaaactgAAGTATACTGAACTAAGT
ATATTGAATATGTAAAAATTAGAAACAGAAGgttaataaaaaaatagaaa
gtcttgtgatttttaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007062XLOC_007062Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012586-exon-sc0000145-1491911889:254731..254896TCONS_00012586-exon-sc0000145-1491911889:254731..254896Clytia hemisphaericaexon
TCONS_00012586-exon-sc0000145-1510915933:254731..254896TCONS_00012586-exon-sc0000145-1510915933:254731..254896Clytia hemisphaericaexon
TCONS_00012586-exon-sc0000145-1575043694:254731..254896TCONS_00012586-exon-sc0000145-1575043694:254731..254896Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000145supercontigsc0000145:254731..254896 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012586 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top