TCONS_00012614 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012614
Unique NameTCONS_00012614
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2250

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012614 ID=TCONS_00012614|Name=TCONS_00012614|organism=Clytia hemisphaerica|type=transcript|length=2250bp
TTTTGTTACTTGGGCCGAAAATCCATGTTCATATCTTCTACATGTATTGA
CAAGACATGGCTAAAAAATCAATTAACTTCAACACAATCACTCTACAAGA
GCTTGAAAAGATCCCTGGTATTGGAAAGTTTAAAGCCCAATCACTGGTTG
ATGAACGAAACCATAGATTGTTTAAGAACATAAATGACTTGATCAAAGTT
GAAGGACtcactttgttatttttaaacagACTTCAGAACAAATTTGACTT
TATTTTCGATACACAATCACCATGCAAAACAAATGCTCTAAAAAGGAAAA
CCGAAAATGTAGATACTTCAATTGATGAAAAAGACAATGGGATCACAACA
CCAGAGAAGAAAGCCAGACCAAAATATAACAATAAATGTGCTTCAACTTC
CAGCTCAAAGATTGTCCCAAATGTGGAGAATGCTCTTTGTAATAGAACTA
TACCTTCATGTGATAGTCCTGGAAAAGCAGTACGTAGTAGGCTTCAATCA
GAAACAGCTAAGCCACCTGATGGACTTCCAGATTGGTTGAATAAATTCCA
TGACTGGTCCAGAGATGAGAGATTGATTGCGTTAAATGACTTGATAGGTT
TATGTGATATGTCGGTCGTCAGACACATGATGGCCAAAATTGAGCCACAT
TTTCAAAGGGAttttatatctttattaccAAAAGAGTTGGCACTCTATGT
TTTATCTTTCTTGGAACCAAAAGATTTATCAAATGCTGCAAGGACTTGCA
GATATTGGAGGATCCTTGGAGAAGACAATCTGTTATGGAAGGAGAAATGC
CATGAATATCAGTTATTTTATCCTCTAAGTGATCTTTTAGAAGAAGGAAA
GGTTGATAAGAAGGCATCACAACCTAATGAGGCACCTTACAAAGAACTTT
TTGCTTATTGTCACAAATTGGAGCGGAATTGGAGGTCAAACACTTTGAGG
CCTGTCATGTATTTAAGAGGTCATGATGATCATGTTGTAACTTGCTTACA
GTTCGACGGTGTTCGTATAGTCAGTGCCTCAGATGATAATACGTTAAAAG
TGTGGTCTGCTGATACTGGAACTTTGATTCGCACCCTTGTGGGACATACA
GGTGGTGTGTGGTCATCACAATTAAGTGGAAATATAGTTGTGAGTGGCTC
AACAGACAGGACGCTGAGGGTCTGGAATGCTGATTCAGGAGAATGTATCC
ATGTTTTACAAGGTCACACATCAACTGTTCGTTGCCTGGCAATGCATGGA
GATAACGTAGTAAGCGGATCCAGAGATGGAACTCTACGTGTCTGGGATGT
CATGAAAGGAACACATCTTCATGTTTTGATTGGTCATGCAGCTGCTGTCA
GATGTGTACAATACAATGGTAAATACGTTGTCAGCGGTGCTTATGATTAT
TTGGTAAAAGTTTGGGATGTTGAAACAGAGACTTGTTTGCATACTCTGAC
TGGTCATTCAAATCGTGTCTACTCATTACAGTTTGATGGTAAATACATCG
TGTCTGGCTCTCTGGATACTTCGATACGTGTTTGGGATGCTCTTAGTGGG
CAGTTATTACACACACTCTTAGGTCATCAATCTTTGACTAGTGGAATGGT
GTTGAAGAATAATTACTTAGTATCTGGGAATGCAGATTCTACTGTAAAAA
TCTGGGATATTGTGTCTGGACAATGTTTACATACTTTAACTGGTCCCAAT
AAACATCAAAGTGCTGTGACTTCTTTACAATTCAATACTAAGTTTGTGGT
TACTAGTTCTGACGATGGATCAGTGAAATTATGGGATCTAAAGACAGGAG
AATTCCTTAGAGACTTGGTTGAATTAGATTCTGGAGGATCTGGCGGTGTG
GTTTGGCGTgtcaaatgcaatgaaaagaaACTTGTATGTGCAGTTGGTAG
CAGGAATGGTACAGAGGAAACTAAACTGTTAGTGTTAGATTTTGATATTC
CCTCTATACAATTTACGTGATTTCAAACTATGATTAATGGGTTGTCCTTG
GCATTATACTAAGAAATTTGTATCCACTCACATGTAGCTTAGATCACCAG
TCTTCCTATGCGAATATAGGGAGATtgtttaaagtttctttttcatCAGT
TATTCAATAAATCCTTATTATAATATTCGTTTATTCagaatttatcaatt
ttttatatGTTAATTTTATATTAATGTTATAGTAGATGTGCATTTGCTCT
TCTTTCATACAACAAACAATAATGTGCAATATTTATAATGTCTTTTTAGG
Run BLAST on NCBI

transcript from alignment at sc0000146:128025..140788+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012614 ID=TCONS_00012614|Name=TCONS_00012614|organism=Clytia hemisphaerica|type=transcript|length=12764bp|location=Sequence derived from alignment at sc0000146:128025..140788+ (Clytia hemisphaerica)
TTTTGTTACTTGGGCCGAAAATCCATGTTCATATCTTCTACATGTATTGA
CAAGGTAACCATTCACACAATTAGATCAGATTTTTCTGCATAGTAGGTTT
TGTTTTaatcatttttacatttttcttaaaatttccatCATGGCAGTTTT
TCATTGTGATTTCTGGCAGGCTTGCCTCTTGTGGACCCTCTTCATTTCCA
TTTGGATTAGAACCTACATGACTATCAAGGATCAGCTAGTACGAAACGCA
GGTTAAGGTTACAGGTTTCAGGGccagggttcaggtttcagggccagggt
agggtgcgcactcgtcgggattttttgcgtggaaaaagtcgaaaatcaaa
attagaacattccatccatcataacttatccttaacaactccaaacttgt
tcattcttttttttttaatactcagaatttatcagagaaaacaaagaaaa
aaaccccatcccattacctaccttcaataaaaagatatacaaTTTATTAG
ACATCAAGGTGGAAAAATGGCGACTCGGAATTTGTGGCACCACCGTCGac
cttgaccaccatttttcaaatggctatcgctaatgagctggatttGTTAT
GGACtcacagttttttttataaaacgcgggaaagatcgtactttagtttg
tcacgtggtagccttttcgataatctacgggccatctttaaatcgagaaa
aaagaagaaatttcgatttttcggcactttcctgaaatttttatcagggc
taccatatatggttggaaagctaagggtttcAGCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCATTAGCGataggctaaagtttaacagtcatcgggccgattttcaga
ccgcgccagcaaaactcctcacgccctgccacacggaagactacaTTTCA
TCCGctatttttggcgcgattttggtgcttccgaaaattatttcttgctg
gcgtggtgtaaggaggcgattctttgaaaaggtgttttttttgtggtttg
aaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNtaataaatgacccctcatttttctca
caaaggtaaggactttcaaataaaattagtttggttttcaaaatttgagg
ggaaaattttggcctgaccaccctagccagggttcaggtttcagggccGG
GGCTCAGGTTTCAGGACCAGGGTTCAGGGTTCAGAGCTCAGGTTAAAATT
ATCTACAAAACAGACTTGCCTTTTTCAAATTACTGACCTCTTTActtctc
ttttctctttacaCTCTTTGTGTGGGGGGAGGGGGATCAAACAAAAAAGC
GAGGGTTGAATGGCATGGAATGCATTCACACCTGACCTTTCACAtcttta
tttgataaaaatttacaGTTGGTATTTCATTTGAGTAATAAAAGCTTCGT
TGTTAAAAAcgccgataaaatttttcttttaagaacacaaattcaacaaa
aaattaagttagTTTTAgcagattttacaaaaaagagaaaaaaaatttgt
cgtCTTCTATTCCAGCCAATTTCATCTTACCAAATAAGTTttataaaaaa
ctatttctttttaaaaaatgggtGGGTGATACTTTcttgctttgaaagaa
aaaataatttaatgttaCGGATGATTTCCACTGGTTCTGATCTTACTCTT
TCAAAAAACGATAAGCGTTTTGCCATATTTCTTTTTACAGGAGGAATAAT
AtaacttattattttttcgttattATTCTGTTCAATATAATAGTAATTGT
TCTTGGTTAATGCTTTGATTTATAATTCTGCTTGTAATAGAATATTTTAG
TTAATTATTGTTTATTCAACGAGTTTTGTAACAAAAAGATAATTTGTACG
TCAAAtgaattatgaaatattttcaaagcaaCGCTGAAAGTAGTAGTGGT
AGTACCTGCTGTCTcatattttaaaaagtattgcTCACCACCAAActatt
aaaagtttaaaaagaaaacacacaAGTATTATATAGAACATCAAGCAAAT
GGTCTGCAGAATAAATAAATATGCCTTGGAACATTCTGGTCTGCAATGTA
CACAATTTTAACATGaaccctgaaacctgaaccctggCCCTGAACCCTGA
ACCCTGGCCTTGAAACCTGAACCCTGGCCCTGAAACCTGTGACCTGGGCC
TGTGTTTCGTACTAGCCGATCAAGGATGTAGATCAGAACATTTTGCTGAA
AGGTTCAGAAAATGAGCTTTGAGCACATCTTGCAATAGACCTTTCCCCTT
TCCTCTCCATCATCCTGCCATAttcagtcaggacctctttggtctttttt
aacattagttcggttagaataaaaacatacctgatcaacacaaccaaacc
ttctgtcttgcatttactctttccttcccaacaacttttgtttttggttA
TGTGGGTTTTTAAAGTCCACTTAAGTatagtaatgaacctcttatacgct
tatctgaataaatctggttgaaaaccttctgtcaggtttcattccgtacg
tttattatccacgtggtgaaccggtctacgaattattttctttaacgggc
gttgaatcgacaatgacatatttaatgatgtcataatcatcaatgccgtg
catattttgtcaatgccgtgcatattttgtcagcgccatgcatattttgt
caacatccttttcattggataaataccactaaaatatacaagataagtaa
acataaatttattgcCCGCGAGCATTATCTcagaattgaagcgggcaaag
attactgCGCAGATTGATAGCGGAcaaaggttttttgaagatattttcag
ttataatctaaggtagaacaaactaaacatagaaagggagtATTTTTCAG
TGCTCTATATGATGAtcagtattttttttgaattctatgtttagattttt
ctacccagccccgttgctatgtacgcacgccctgttgctaagacctttgc
ttgaaatcggaactgaaaccaaaataatttagcgcacactgccgtttgcg
taatatcaataaagtgaaatgaggtcctgactggcCATATtgaatgggct
attccaaaaaaatattgtataggggtattgacgaactatcccctggaaat
taggggtcgacacccctggaaagtgaaattttgtgaaaaagggcctgGAA
AATACCTATTGTTGATGTCAGTTTAGGAGgagagaaccccctggaaaata
tcccccttggaaaatctgaaaaatgaacaaaaacccttggaaaatcaagg
ctcagaccCTCTGGAagagttcgtcaatacccctgtatggtttaaaaatg
gaatagcccaatttttGTATgcaaatcatcatcatcattccCCTTAGAAA
GTAtccaaaacatatgcaaaaagaaagtattaatttaaaacttacatgca
taattggcattatattaatgtgtaatcttgtagaagaaagattaaatttg
cttctcttgaaaattaaaaataatcatattcgctcatctcttaccGTCAA
TtgttctaacttgggacgattggttgaaacattgAGAATGTTGATATTCT
GGCCTGTagtttcacttactgttaaatctctttgacaacaaatttgtttt
gataactccgccaagtttatcaatcaaactttctgtcataacatgtcacg
ataactttcactgatagtgcaccctttttagtttttttgttttcattcaa
aatgaccggacaatgattggagaattagagaacgcctgtGGGATAACCGC
CTATTGCCTGATGGGATTTACAAATAACGAGTAAAACAGgggttttgata
ttttcttgcACAAGAAAGAgaatgtgtgtactccgtcttcgtggaatttt
ttaatggcatgaaaacagaatatgctatgtctttaagaacagtttctaaa
aggcttttattGTTCTGTAagttattttctatttcttttatGCTTATTAG
GGCTTCTAATTAAAATAAAAGGTGCTTAGCCAATCTAACGGTCATTTCAG
ACAAAATGTTCAAAGGGGATGCATCCCTTTAGAACCACCCAATTTACCTC
ACATGGTCCAGGTTTGCTTGTCAGTAAATTATGCATGCAAACTTAGTTCA
AGTGATTTATTTTAGTAAGCTTTTTTGGGACTGgtcaaaattttagatgt
ttaGATGATAACTTTTTATTGACTAAACAGATAACAAAGCTTCTtataaa
tcaacaaaaattgttcttattgactcgctttcttcgtaactttcatgagt
gtttctaagatcacttttatcggcttgtttacttcataactttcaagagt
gtttcttaGTAAATATTTATCGATTCGCTTTCTTcttaactttcaagagt
gtttttaagaccacttttatcaacttgcttacttcataactttcaagagt
gtttctaagatcacttttatcggcctgcttacttcataactttcaagagt
gtttaaaagttaactttatcaacttgcttacttcgtaactttcaagagtg
tttctgagatcacttttatcaatttacTTTCTTTGTTAccttcaagggtg
tttcaaagttaacttttattgaCTCGCtgtcttcgtaactttcaagagtg
tttttaagaccacttttatcaacttgcttaggcggtcatcgaaaaattgt
tgtATTCgggtcacccgcccgcatcaaattttccgctgattttccggtgc
ggagatgcggaaaaaaatctgggaaaagcaatttgttctttttaaagcat
agcttttttctcaattgctctgacgaccatcgaaaaattgttttgctcgc
attaccacccgcccctgtgTTACTGgtgtgattaaaaaaaaaccgggaat
gtttttgaccgcccgtccgcccgcatgtattttaacacccgttgcgacgc
gaacagagcattttttcgatgaccgccttacttcataactttcaagagtg
tttctaagatcacttttataggcttgcttacttcataacactttcaagag
tgtttcaaagttaacttttattgactcgctttcttcgtaactttcaagag
tgtttttaagaccacttttatcaacttgcttacttaataactttcaagag
tgtttctaagatcacttttatcggcttgctttcttcgtaactttcaggag
tgtttctaagatcacttctATCAGcttgcttacttcataactttcaagag
tgtttcaaagttaacttttattgactcgctttctttgtaactttcaagag
tgtttctaagatcacttttatgaatttgctttctttgttactttcaaggg
tgttccaaagttaacttttattgaCTTGCTTTCTtagtaactttcaagag
tgtttttaagaccacttttatcaacttgcttacttcctaactttcaagag
tgtttctgagttaacttttatcaactcgctttcttcgtaacttttaagag
tgtttctaagttaacttttatcaacttgctttctttgtaactttcaaggg
tgtttctaagatcactttaatcgaatcaatttctccgttacagtaacaaa
ctgttcCAAGGTAACTTTTAGTTTACCTACTCTCTTTCTCCGTAACTTTC
AAGActgcataattttagaaaaatatacactgaatgaccgacaggatttt
gagtttgaccaacaggatttcatttctgttGGACATGATGTCCGATAGAC
TAATTATATTTATTTGTAGCCCTGTACTATTGTGTTTTGATTCAGCAAAT
TATTGTAATTTTACAGCTAGCCAATAATAAGCAACCCTTAAAAGGCTCAC
TTTTAAAATATAAGAATGTTTATATTGCCTgtggcaatttttttaaagat
aattttGTATGAATTCTTTATTCACCTTCATTATAAACATTTTAGAATGA
CATTGTTGACATGATTATAATTTGTTTTGAGGCAGCTCTTATACTTGTTT
TATTTATTACAACCTCGAACACTCAGAGACAAGTTTGTACAATGCTTAAT
CTTGATATTTTACTTttaccatagtcattataaaagcACTGATCTGGAAg
gcttttttctcttttaatattaaaagatggagcttacgtaccaaaatcaa
tttattttgcagactttttgatcatgtgattagaaaatagaccaatccca
agaggagatttttgtaacatgatcaaaaagtatgcgaattgcaacttgtc
ttttgtttgtaagaaaagaaaattgaacaaaaagctaaaacaatacattg
ccagaccggggttttttataatgactatgcttTTACAATGGCTTGTACTG
ATCCTTCTTCTTTTAAACAGACATGGCTAAAAAATCAATTAACTTCAACA
CAATCACTCTACAAGAGCTTGAAAAGATCCCTGGTATTGGAAAGTTTAAA
GCCCAATCACTGGTTGATGAACGAAACCATAGATTGTTTAAGAACATAAA
TGACTTGATCAAAGTTGAAGGACtcactttgttatttttaaacagACTTC
AGAACAAATTTGACTTTATTTTCGATACACAATCACCATGCAAAACAAAT
GCTCTAAAAAGGAAAACCGAAAATGTAGATACTTCAATTGATGAAAAAGA
CAATGGGATCACAACACCAGAGAAGAAAGCCAGACCAAAATATAACAATA
AATGTGCTTCAACTTCCAGCTCAAAGATTGTCCCAAATGTGGAGAATGCT
CTTTGTAATAGAACTATACCTTCATGTGATAGTCCTGGAAAAGCAGTACG
TAGTAGGCTTCAATCAGAAACAGCTAAGCCACCTGATGGACTTCCAGATT
GGTTGAATAAATTCCATGACTGGTCCAGAGATGAGAGATTGATTGCGTTA
AATGACTTGATAGGTTTATGTGATATGTCGGTCGTCAGACACATGATGGC
CAAAATTGAGCCACATTTTCAAAGGGAttttatatctttattaccAAAAG
AGTTGGCACTCTATGTTTTATCTTTCTTGGAACCAAAAGATTTATCAAAT
GCTGCAAGGACTTGCAGATATTGGAGGATCCTTGGAGAAGACAATCTGTA
AGCCATCATCTTTTCTCTTTGTTTGTTCTTTGATAGTGAAACTGAATTTT
GTTTATGGCAGTGACAGTGTTAGAATATAAATTGTTTTTCTATACTCTAA
ATTTAAACAAAATGTGTTATTTTTAGGTCAATTGATGCTATTataaaaaa
gcctaaattttcaGAAGGTTGAAACCAATTATTATTCTTTCTTTAGGTTA
TGGAAGGAGAAATGCCATGAATATCAGTTATTTTATCCTCTAAGTGATCT
TTTAGAAGAAGGAAAGGTTGATAAGAAGGCATCACAACCTAATGAGGCAC
CTTACAAAGAACTTTTTGCTTATTGTCACAAATTGGAGCGGAATTGGAGG
TCAAACACTTTGAGGCCTGTCATGTATTTAAGAGGTCATGATGATCATGT
TGTAACTTGCTTACAGTTCGACGGTGTTCGTATAGTCAGTGCCTCAGATG
ATAATACGTTAAAAGTGTGGTCTGCTGATACTGGAACTTTGATTCGCACC
CTTGTGGGACATACAGGTTTggattatttttatacaaaaaagcATGAAAT
GGTCTTAATGTCTTATTGAAACTTCAACCAAGTGGGGCTGCCTATTTGAT
ATGCGTAATTCTGTCACTTTTATCATCCCACAATATATTTGACTGCTTCA
TGATATGTTTAGGACATTTTTGAATAATGTTCTATAAATATTGAATTACT
TCAAATAGGTGGTGTGTGGTCATCACAATTAAGTGGAAATATAGTTGTGA
GTGGCTCAACAGACAGGACGCTGAGGGTCTGGAATGCTGATTCAGGAGAA
TGTATCCATGTTTTACAAGGTCACACATCAACTGTTCGTTGCCTGGCAAT
GCATGGAGATAACGTAGTAAGCGGATCCAGAGATGGAACTCTACGTGTCT
GGGATGTCATGAAAGGAACACATCTTCATGTTTTGATTGGTCATGCAGCT
GCTGTCAGATGGTAAAACTGTTCTTAGACCCCACATCCAGGCTTTTGTGG
TTTTGGTTACTTTCTCTGATTTTTCATAATATTTATAGCTCAACAACAAA
CAATTATTTAAGCATAgaattgtaaaaatttaaattgtgcTACACCGCAA
CTTTTTTCAACGTATTTCCACTCCAGTTGAAGCTCTCTCCTTAAAATCTT
GCATCCATTTTTGCTAATGGTGTGTATATTGATTCCATTATACTAGTTTT
AgtaaagaaaacaagttttaaagtTTATTCCATTATATTGATTTCATATA
TGATATTTATTTTCAACAGTGTACAATACAATGGTAAATACGTTGTCAGC
GGTGCTTATGATTATTTGGTAAAAGTTTGGGATGTTGAAACAGAGACTTG
TTTGCATACTCTGACTGGTCATTCAAATCGTGTCTACTCATTACAGTTTG
ATGGTAAATACATCGTGTCTGGCTCTCTGGATACTTCGATACGTGTTTGG
GATGCTCTTAGTGGGCAGTTATTACACACACTCTTAGGTCATCAATCTTT
GACTAGTGGAATGGTGTTGAAGAATAATTACTTAGTATCTGGGAATGCAG
ATTCTACTGTAAAAATCTGGGATATTGTGTCTGGACAATGTTTACATACT
TTAACTGGTCCCAATAAACATCAAAGTGCTGTGACTTCTTTACAATTCAA
TACTAAGTTTGTGGTTACTAGTTCTGACGATGGATCAGTGAAATTATGGG
ATCTAAAGACAGGAGAATTCCTTAGAGACTTGGTTGAATTAGATTCTGGA
GGATCTGGCGGTGTGGTTTGGCGTgtcaaatgcaatgaaaagaaACTTGT
ATGTGCAGTTGGTAGCAGGAATGGTACAGAGGAAACTAAACTGTTAGTGT
TAGATTTTGATATTCCCTCTATACAATTTACGTGATTTCAAACTATGATT
AATGGGTTGTCCTTGGCATTATACTAAGAAATTTGTATCCACTCACATGT
AGCTTAGATCACCAGTCTTCCTATGCGAATATAGGGAGATtgtttaaagt
ttctttttcatCAGTTATTCAATAAATCCTTATTATAATATTCGTTTATT
CagaatttatcaattttttatatGTTAATTTTATATTAATGTTATAGTAG
ATGTGCATTTGCTCTTCTTTCATACAACAAACAATAATGTGCAATATTTA
TAATGTCTTTTTAGGGATGTTGTCAATGTATGCTATGTATACATTACAAC
ATCGTTGCTTTGTTCCTTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTGGCACTCTATGTTTTATCTTTCTTGGA
ACCAAAAGATTTATCAAATGCTGCAAGGACTTGCAGATATTGGAGGATCC
TTGGAGAAGACAATCTGTAAGCTATCATCTTTTCTCTTTGTTTGTTCTTT
GATAGTGAAACTGAATTTTGTTTATGGCAGTGACAGTGTTGGAATATAAA
TTGTTTTTCTATACTCTAAATTTAAACAAAATGTGTTATTTTTAGGTCAA
TTGATGCTATTataaaaaagcctaaatttcTAGAAGGTTGAAACCAATTA
TTATTCTTTCTTTAGGTTATGGAAGGAGAAATGCCATGAATATCAGTTAT
TTTATCCTCTAAGTGATCTTTTAGAAGAAGGAAAGGTTGATAAGAAGGCA
TCACAACCTAATGAGGCACCTTACAAAGAACTTTTTGCTTATTGTCACAA
ATTGGAGCGGAATTGGAGGTCAAACACTTTGAGGCCTGTCATGTATTTAA
GAGGTCATGATGATCATGTTGTAACTTGCTTACAGTTCGACGGTGTTCGT
ATAGTCAGTGCCTCAGATGATAATACGTTAAAAGTGTGGTCTGCTGATAC
TGGAACTTTGATTCGCACCCTTGTGGGACATACAGGTTTggattattttt
atacaaaaaagcATGAAATGGTCTTAAAATGTCTTATTGAAACTTCAACC
AAGTGGGGTTGCCTATTTGATATGCGTAATTCTGTCACTTTTATTATCCC
ACAATATATTTGACTGCTTCATGATATGTTTAGGACATTTTTGAATAATG
TTCTATAAATATTGAATTACTTCAAATAGGTGGTGTGTGGTCATCACAAT
TAAGTGGAAATATAGTTGTGAGTGGCTCAACAGACAGGACGCTGAGGGTC
TGGAATGCTGATTCAGGAGAATGTATCCATGTTTTACAAGGTCACACATC
AACTGTTCGTTGCCTGGCAATGCATGGAGATAACGTAGTAAGCGGATCCA
GAGATGGAACTCTACGTGTCTGGGATGTCATGAAAGGAACACATCTTCAT
GTTTTGATTGGTCATGCAGCTGCTGTCAGATGGTAAAACTGTTCTTAGAC
CCCACATCCAGGCTTTTGTGGTTTTGGTTACTTTCTCTGATTTTTCATAA
TATTTATAGCTCAACAACAAACAATTATTTAAGCATAgaattgtaaaaat
ttaaattgtgcTACACCGCAACTTTTTTCAACGTATTTCCACTCCAGTTG
AAGCTCTCTCCTTAAAATCTTGCATCCATTTTTGCTAATGGTGTGTATAT
TGATTCCATTATACTAGTTTTAgtaaagaaaacaagttttaaagtTTATT
CCATTATATTGATTTCATATATGATATTTATTTTCAACAGTGTACAATAC
AATGGTAAATACGTTGTCAGCGGTGCTTATGATTATTTGGTAAAAGTTTG
GGATGTTGAAACAGAGACTTGTTTGCATACTCTGACTGGTCATTCAAATC
GTGTCTACTCATTACAGTTTGATGGTAAATACATCGTGTCTGGCTCTCTG
GATACTTCGATACGTGTTTGGGATGCTCTTAGTGGGCAGTTATTACACAC
ACTCTTAGGTCATCAATCTTTGACTAGTGGAATGGTGTTGAAGAATAATT
ACTTAGTATCTGGGAATGCAGATTCTACTGTAAAAATCTGGGATATTGTG
TCTGGACAATGTTTACATACTTTAACTGGTCCCAATAAACATCAAAGTGC
TGTGACTTCTTTACAATTCAATACTAAGTTTGTGGTTACTAGTTCTGACG
ATGGATCAGTGAAATTATGGGATCTAAAGACAGGAGAATTCCTTAGAGAC
TTGGTTGAATTAGATTCTGGAGGATCTGGCGGTGTGGTTTGGCGTgtcaa
atgcaatgaaaagaaACTTGTATGTGCAGTTGGTAGCAGGAATGGTACAG
AGGAAACTAAACTGTTAGTGTTAGATTTTGATATTCCCTCTATACAATTT
ACGTGATTTCAAACTATGATTAATGGGTTGTCCTTGGCATTATACTAAGA
AATTTGTATCCACTCACATGTAGCTTAGATCACCAGTCTTCCTATGCGAA
TATAGGGAGATtgtttaaagtttctttttcatCAGTTATTCAATAAATCC
TTATTATATTCGTTTATTCagaatttatcaattttttatatGTTAATTTT
ATATTAATGTTATAGTAGATGTGCATTTGCTCTTCTTTCATACAACANAT
GATATTTATTTTCAACAGTGTACAATACAATGGTAAATACGTTGTCAGCG
GTGCTTATGATTATTTGGTAAAAGTTTGGGATGTTGAAACAGAGACTTGT
TTGCATACTCTGACTGGTCATTCAAATCGTGTCTACTCATTACAGTTTGA
TGGTAAATACATCGTGTCTGGCTCTCTGGATACTTCGATACGTGTTTGGG
ATGCTCTTAGTGGGCAGTTATTACACACACTCTTAGGTCATCAATCTTTG
ACTAGTGGAATGGTGTTGAAGAATAATTACTTAGTATCTGGGAATGCAGA
TTCTACTGTAAAAATCTGGGATATTGTGTCTGGACAATGTTTACATACTT
TAACTGGTCCCAATAAACATCAAAGTGCTGTGACTTCTTTACAATTCAAT
ACTAAGTTTGTGGTTACTAGTTCTGACGATGGATCAGTGAAATTATGGGA
TCTAAAGACAGGAGAATTCCTTAGAGACTTGGTTGAATTAGATTCTGGAG
GATCTGGCGGTGTGGTTTGGCGTgtcaaatgcaatgaaaagaaACTTGTA
TGTGCAGTTGGTAGCAGGAATGGTACAGAGGAAACTAAACTGTTAGTGTT
AGATTTTGATATTCCCTCTATACAATTTACGTGATTTCAAACTATGATTA
ATGGGTTGTCCTTGGCATTATACTAAGAAATTTGTATCCACTCACATGTA
GCTTAGATCACCAGTCTTCCTATGCGAATATAGGGAGATtgtttaaagtt
tctttttcatCAGTTATTCAATAAATCCTTATTATAATATTCGTTTATTC
agaatttatcaattttttatatGTTAATTTTATATTAATGTTATAGTAGA
TGTGCATTTGCTCTTCTTTCATACAACAAACAATAATGTGCAATATTTAT
AATGTCTTTTTAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007079XLOC_007079Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012614-exon-sc0000146-1491911889:128025..128078TCONS_00012614-exon-sc0000146-1491911889:128025..128078Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1510915933:128025..128078TCONS_00012614-exon-sc0000146-1510915933:128025..128078Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1575043694:128025..128078TCONS_00012614-exon-sc0000146-1575043694:128025..128078Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1491911889:134645..135371TCONS_00012614-exon-sc0000146-1491911889:134645..135371Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1510915933:134645..135371TCONS_00012614-exon-sc0000146-1510915933:134645..135371Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1575043694:134645..135371TCONS_00012614-exon-sc0000146-1575043694:134645..135371Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1491911889:135571..135890TCONS_00012614-exon-sc0000146-1491911889:135571..135890Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1510915933:135571..135890TCONS_00012614-exon-sc0000146-1510915933:135571..135890Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1575043694:135571..135890TCONS_00012614-exon-sc0000146-1575043694:135571..135890Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1491911889:138454..138706TCONS_00012614-exon-sc0000146-1491911889:138454..138706Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1510915933:138454..138706TCONS_00012614-exon-sc0000146-1510915933:138454..138706Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1575043694:138454..138706TCONS_00012614-exon-sc0000146-1575043694:138454..138706Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1491911889:139893..140788TCONS_00012614-exon-sc0000146-1491911889:139893..140788Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1510915933:139893..140788TCONS_00012614-exon-sc0000146-1510915933:139893..140788Clytia hemisphaericaexon
TCONS_00012614-exon-sc0000146-1575043694:139893..140788TCONS_00012614-exon-sc0000146-1575043694:139893..140788Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000146supercontigsc0000146:128025..140788 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.98937	2.74039	22.0611	20.2552	1.96394	0.791159	4.91093	1.31314	2.12343	3.41058	0.762605	1.59778	1.68484	3.25536	1.72173	2.35543	1.44048	1.90615	1.79132	1.14091	2.33141	2.07024	3.18798	3.22235	8.86686e-06	0.0250829	1.43197	0.69194	2.23206	4.53161
Blast
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BLAST of TCONS_00012614 vs. Swiss-Prot (Human)
Match: FBXW7 (F-box/WD repeat-containing protein 7 OS=Homo sapiens GN=FBXW7 PE=1 SV=1)

HSP 1 Score: 699.893 bits (1805), Expect = 0.000e+0
Identity = 344/518 (66.41%), Postives = 406/518 (78.38%), Query Frame = 3 
Query:  396 TSSSKIVPNVENALCNRTIPSCDSPGKAVRSRLQSETAKPPDGLPDWLNKFHDWSRDERLIALNDLIGLCDMSVVRHMMAKIEPHFQRDFISLLPKELALYVLSFLEPKDLSNAARTCRYWRILGEDNLLWKEKCHEYQLFYPLSDLLEEGKVDKKASQPNEAPYKELFAYCHKLERNWRSNTLRPVMYLRGHDDHVVTCLQFDGVRIVSASDDNTLKVWSADTGTLIRTLVGHTGGVWSSQLSGNIVVSGSTDRTLRVWNADSGECIHVLQGHTSTVRCLAMHGDNVVSGSRDGTLRVWDVMKGTHLHVLIGHAAAVRCVQYNGKYVVSGAYDYLVKVWDVETETCLHTLTGHSNRVYSLQFDGKYIVSGSLDTSIRVWDALSGQLLHTLLGHQSLTSGMVLKNNYLVSGNADSTVKIWDIVSGQCLHTLTGPNKHQSAVTSLQFNTKFVVTSSDDGSVKLWDLKTGEFLRDLVELDSGGSGGVVWRVKCNEKKLVCAVGSRNGTEETKLLVLDFDI 1949
            TS++ +VP          + + +  G+  R R+ S   +PP GL +WL  F  WS  E+L+AL++LI  C+ + V+HMM  IEP FQRDFISLLPKELALYVLSFLEPKDL  AA+TCRYWRIL EDNLLW+EKC E  +  PL   ++  KV K       +P+K  +   H+++ NWR   L+    L+GHDDHV+TCLQF G RIVS SDDNTLKVWSA TG  +RTLVGHTGGVWSSQ+  NI++SGSTDRTL+VWNA++GECIH L GHTSTVRC+ +H   VVSGSRD TLRVWD+  G  LHVL+GH AAVRCVQY+G+ VVSGAYD++VKVWD ETETCLHTL GH+NRVYSLQFDG ++VSGSLDTSIRVWD  +G  +HTL GHQSLTSGM LK+N LVSGNADSTVKIWDI +GQCL TL GPNKHQSAVT LQFN  FV+TSSDDG+VKLWDLKTGEF+R+LV L+SGGSGGVVWR++ +  KLVCAVGSRNGTEETKLLVLDFD+
Sbjct:  194 TSTTGLVPCSATPTTFGDLRAANGQGQQ-RRRITS--VQPPTGLQEWLKMFQSWSGPEKLLALDELIDSCEPTQVKHMMQVIEPQFQRDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLH--IKRRKVIKPGFI--HSPWKSAYIRQHRIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 704
The following BLAST results are available for this feature:
BLAST of TCONS_00012614 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FBXW70.000e+066.41F-box/WD repeat-containing protein 7 OS=Homo sapie... [more]
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