TCONS_00012646 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012646
Unique NameTCONS_00012646
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2336

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012646 ID=TCONS_00012646|Name=TCONS_00012646|organism=Clytia hemisphaerica|type=transcript|length=2336bp
TACCATTTTAAATTCTATAAATTCGAATTCAAAAGAAGAAGGGTGTCTCA
ATATCGGTGCATAAACacagaaaagaaaagaacatgGCGACGGCAAGAAA
ACTAACCAAAAGTATCGATGACCTTTCTAGCAGTGAAGCTTCAGCTGCTG
AAATCATCTCAAAAATGTCAGAATACCAATTTATAGCTGTTGTCCAAGAT
GGAAATGCATGCGAGCCTATGGAGCAAGTCGTGAATGAAAAAGGTGAGGT
AGTTGCTATAAATACAGATGAATATTATGAGACAATAGGACAAGCAGTAC
CTGTCGAGTTGAATTTTGAATCCGCTGATGCAGGAATTAACGAATTAAAG
AGACAAAACGGTGAAGGAATAAAAGAGGCTGATTCTAATGAAGAAGTGAT
TGCTCAGGAAGAGACTATTGAAAATGTTGAACAGGATGAAGGGGTAGAAT
CAGTTCCATCGGATGCTGAAATTATTGCAAGAATGGTTGTTGAGCGTGAA
CAACTACAAGGTAACAATGAAAATGTAGCTGGGAATTTGAAGGATATGTT
GCTGCCACTTGGTATAAAAATACCAAATCATCAGAATATTATTGGAACTA
AAAGAAAACGACCTAAAAGTTCCTTGTTTATTGGATGTTCACCTGAAGCA
ACTCAAGTAATCAATGAATTTGATGCTCTTAAAGAACGccttcagatcaa
aacaaatttagACATGCTAAAACATATGCTGAagcttgaaaagaaatact
taaaTTCCACTGTTGTTACTACTGAGTGCATTGTTGACGATGgcaacaaa
aatacaaaggcTATTTTGCAACTTCTGTCGACGTCGTCAGCAGCCACTGA
CCAtcatcaaacaaaaacattggaTAATGAGATAATAACACCACGGTTAG
CAACAGATGAGCTGCATGGCAGTGATACGATGGAACCATCAGGCATAAGA
AATGAAGAAGTCACAATTAATATAATGAATGAGCCTGTTCCAGAAAGGAA
TGCATCAAACGACATGACAGAGTTGTTAGGCTTGACTGCACTGAATGTCA
AAACCATTCAATTGTCTAAGAAATATCTCGAACACATTGTAAAGGAAGGA
TATTACATTTCTGGCTTCATAGATGGTACTGATAAATTGGATGAATTTCT
GAAGTTCTTTCGAATCATCACAGGGTCGGCATTTTCGATTCGTAGGTCAA
AGTCCAAAATTAATGATGACCCAGAACCAGAGGATAAGCCTCTTCGTAAA
TACAAGCCAGGTTATCTTGGAAAAGGTCAAATCAAATGGGAAAAGAATAT
TGGGGTACCTCCGATCCCATTTACCGGTGTTCCTTTCACAACTGAAGGCA
GTACCACTTATCAATGTGTATTTGGACCTAAAAGAGCTAAAATGTCGAAG
GAGAACAACGATGTTGAAGAAGATGATGTCTGTGATTTGGATACACCAAG
CAAGAGACGGAAATCTATTCGAGAATCAAAGAAAAAGGATTGCCCAGCAC
AAATTCACATACGAACTGTACATCGTTTCCCAACATATAATTGCATCAAT
AACATTCAACCAGTGAAATCAGAATCTCGAACAACATATGTCAATAAATG
TCAACGTGGTATGATTTTAGCGAAATTACGGGAGGACATTGTTAATGATC
AGGTTCATGGTGAACAAGGCTTTTGGATTCGTGTTCCTTTACCAGAAGTT
CACCAGAACCATTCTCTTGGGCCTTTTGATGGTGATGATCCACCCTTAAC
TGAAGACACTATTCTGGAAATGAAAACCTTACTTCATGATGCTGCGATTT
CTTCTACTTCATAATGCCTTTATATAAATCTTATACTTTTACAggcaact
ctctctaattcgaacctctattattcgaatgtttctatAATAATTCGAAC
TAGAATATTTCCCTCTTCTAGAAATTAGTATACAATATTCTCTGTAAATC
gtatctttctttaattcgaagaaaatccgTGGTCCCTTgaggatcgaatt
agagagaatcgGCTATATCTTCACgttcatctttattttcacgACAATTT
TACTTATGtaattggttggttgatattagTTCTCAAATCTTCGGTTTTTG
AGTTCTTCATTCATGCTTTATCATAGCAAATATCTTTAGATTTTAGAGTA
TTTATTTTAACCGTTTGACACGTAAAAAGAACTGTAAAATTAAATACACC
AATCATGCCACAGACTCCAGTGACCGTATACTTAGAATAGCAATAGATTT
GTTAATTGgggaaaaacaaaagaaattctgaCTGGTTCAATTAAATAGGA
TATTGTTGAAAAggcgaacgaaaaaaaaaacatcaa
Run BLAST on NCBI

protein sequence of TCONS_00012646-protein

>TCONS_00012646-protein ID=TCONS_00012646-protein|Name=TCONS_00012646-protein|organism=Clytia hemisphaerica|type=polypeptide|length=576bp
MATARKLTKSIDDLSSSEASAAEIISKMSEYQFIAVVQDGNACEPMEQVV
NEKGEVVAINTDEYYETIGQAVPVELNFESADAGINELKRQNGEGIKEAD
SNEEVIAQEETIENVEQDEGVESVPSDAEIIARMVVEREQLQGNNENVAG
NLKDMLLPLGIKIPNHQNIIGTKRKRPKSSLFIGCSPEATQVINEFDALK
ERLQIKTNLDMLKHMLKLEKKYLNSTVVTTECIVDDGNKNTKAILQLLST
SSAATDHHQTKTLDNEIITPRLATDELHGSDTMEPSGIRNEEVTINIMNE
PVPERNASNDMTELLGLTALNVKTIQLSKKYLEHIVKEGYYISGFIDGTD
KLDEFLKFFRIITGSAFSIRRSKSKINDDPEPEDKPLRKYKPGYLGKGQI
KWEKNIGVPPIPFTGVPFTTEGSTTYQCVFGPKRAKMSKENNDVEEDDVC
DLDTPSKRRKSIRESKKKDCPAQIHIRTVHRFPTYNCINNIQPVKSESRT
TYVNKCQRGMILAKLREDIVNDQVHGEQGFWIRVPLPEVHQNHSLGPFDG
DDPPLTEDTILEMKTLLHDAAISSTS
Run BLAST on NCBI

transcript from alignment at sc0000146:46445..50113-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012646 ID=TCONS_00012646|Name=TCONS_00012646|organism=Clytia hemisphaerica|type=transcript|length=3669bp|location=Sequence derived from alignment at sc0000146:46445..50113- (Clytia hemisphaerica)
TACCATTTTAAATTCTATAAATTCGAATTCAAAAGAAGAAGGGTGTCTCA ATATCGGTGCATAAACACAGAAAAGAAAAGAACATGGCGACGGCAAGAAA ACTAACCAAAAGTATCGATGACCTTTCTAGCAGTGAAGCTTCAGCTGCTG AAATCATCTCAAAAATGTCAGAATACCAATTTATAGCTGTTGTCCAAGAT GGAAATGCATGCGAGCCTATGGAGCAAGTCGTGAATGAAAAAGGTGAGGT AGTTGCTATAAATACAGATGAATATTATGAGACAATAGGACAAGCAGTAC CTGTCGAGTTGAATTTTGAATCCGCTGATGCAGGAATTAACGAATTAAAG AGACAAAACGGTGAAGGAATAAAAGAGGCTGATTCTAATGAAGAAGTGAT TGCTCAGGAAGAGACTATTGAAAATGTTGAACAGGATGAAGGGGTAGAAT CAGTTCCATCGGATGCTGAAATTATTGCAAGAATGGTTGTTGAGCGTGAA CAACTACAAGGTAACAATGAAAATGTAGCTGGGAATTTGAAGGATATGTT GCTGCCACTTGGTATAAAAATACCAAATCATCAGAATATTATTGGAACTA AAAGAAAACGACCTAAAAGTTCCTTGTTTATTGGATGTTCACCTGAAGCA ACTCAAGTAATCAATGAATTTGATGCTCTTAAAGAACGCCTTCAGATCAA AACAAATTTAGACATGCTAAAACATATGCTGAAGCTTGAAAAGAAATACT TAAATTCCACTGTTGTTACTACTGAGTGCATTGTTGACGATGGCAACAAA AATACAAAGGCTATTTTGCAACTTCTGTCGACGTCGTCAGCAGCCACTGA CCATCATCAAACAAAAACATTGGATAATGAGATAATAACACCACGGTTAG CAACAGATGAGCTGCATGGCAGTGATACGATGGAACCATCAGGCATAAGA AATGAAGAAGTCACAATTAATATAATGAAGTAAGAAGGAATATAAATTTT TGCTAAATGTGCTTACATGATAAATAACTGATTAAGATACTAAGCATAAA ACAGCCCTATATCGTTTGATGATTGAATAGTCATTTCAACATTGTTCAGC AATAAAAATCTATTCTATTTGTAAATCAACATAGCTAACACAGCAAAAAA CCTTTTGCTAGATGTCATGTTGAATAATTTAGAACTCCAGCTTTGAAGCA ATGATAAGAAAAAATTAATGCACACTTGAAATAATTTTGCATTAATGTGT GATTGTTTTAATGCTGGAATTAATTAATTTAATTATTCAACAAGAAACCC TAACCAGTGAAAAGTCTATGTTAAGGCTGATTTCCTTTCGAAATTGACTC ATTGTGTGTTTTTATCACCTTAGATTTTGAAGCTAAGAGAATTTAAATCT GCATCTTGTTGCCCTTTATTCAAAAAATAATAAACTTATTATATTTGATA TATTTTAGTGAGCCTGTTCCAGAAAGGAATGCATCAAACGACATGACAGA GTTGTTAGGCTTGACTGCACTGAATGTCAAAACCATTCAATTGTCTAAGA AATATCTCGAACACATTGTAAAGGAAGGATATTACATTTCTGGCTTCATA GATGGTACTGATAAATTGGATGAATTTCTGAAGTTCTTTCGAATCATCAC AGGGTCGGCATTTTCGATTCGTAGGTCAAAGTCCAAAATTAATGATGACC CAGAACCAGAGGATAAGCCTCTTCGTAAATACAAGCCAGGTTATCTTGGA AAAGGTATGTGCCAGTTTTAGTAGTAGTGTAGTAGTTTGACCAAATTTCT CCTCTCCCTCTGATTCAAACAAATAAATCTTGGTGATTGCTTCTGAGGTG ATGGCTTAGAATGTTAGAAATGTGAAAAAAAACAAGAATTTCCAAAACAT GATTTATGTCAGTGTTAAAAGTTCTTCCGTCTCAAACTGATTCCCGTCTC AGAAAAAGGTTTTTTTCTTCTGTATAATTCACTAAAATTCCAAGGATAAA TATGTGCTAATTTGCTGTGTAAAACCCATAAATTCCTTCACAGGAGAAGA ACTTTGCTTTGAACACTGCTATTGGATCACACACTTTTTTTCATTTCTAA CAACCAGGTCAAATCAAATGGGAAAAGAATATTGGGGTACCTCCGATCCC ATTTACCGGTGTTCCTTTCACAACTGAAGGCAGTACCACTTATCAATGTG TATTTGGACCTAAAAGAGCTAAAATGTCGAAGGAGAACAACGATGTTGAA GAAGATGATGTAAGTTTTGGTGGGAAGAAAGTTTGGCTAATTTCGTTCCC GCTGTAATTAATTTTTTCGGAAATCCGCCAAAGTAAATTCCCGCCAAATT TAAATTATTTTATTCATTTCCTAAAATGTGTGATATTTCAGGCCTGAAAA CAGTTTTTATGTTTAAATTCCTGTCAAAAATTTTGGCGTAATGGTATTTG TACTTGGAACAAGTGAACAGTTTTTAATTAAACTCTATTTCCTCTCTTTC ATAAATTTGAACGGGGAAGCAGCTAAACAGCTCTCGAAATTACATTAGTC ACAAATGGTATAAGTTTACAGTCACAATCCTTATTTTTCTAACAACTGTT TCTTTGCGATTTAGACGTTCCATTTGTTTTCATTTGTAATCAGGCTGCTG GCATCCACTATGTACCGGATTCGCCTTTTCCTTATATTTTACCTGTTTTG TAGAGGTCGGCGATTTAGACTAATTTGTAATCACAATAAATATTTGTATA TTTTTACAAGGTCTGTGATTTGGATACACCAAGCAAGAGACGGAAATCTA TTCGAGAATCAAAGAAAAAGGATTGCCCAGCACAAATTCACATACGAACT GTACATCGTTTCCCAACATATAATTGCATCAATAACATTCAACCAGTGAA ATCAGAATCTCGAACAACATATGTCAATAAATGTCAACGTGGTATGATTT TAGCGAAATTACGGGAGGACATTGTTAATGATCAGGTTCATGGTGAACAA GGCTTTTGGATTCGTGTTCCTTTACCAGAAGTTCACCAGAACCATTCTCT TGGGCCTTTTGATGGTGATGATCCACCCTTAACTGAAGACACTATTCTGG AAATGAAAACCTTACTTCATGATGCTGCGATTTCTTCTACTTCATAATGC CTTTATATAAATCTTATACTTTTACAGGCAACTCTCTCTAATTCGAACCT CTATTATTCGAATGTTTCTATAATAATTCGAACTAGAATATTTCCCTCTT CTAGAAATTAGTATACAATATTCTCTGTAAATCGTATCTTTCTTTAATTC GAAGAAAATCCGTGGTCCCTTGAGGATCGAATTAGAGAGAATCGGCTATA TCTTCACGTTCATCTTTATTTTCACGACAATTTTACTTATGTAATTGGTT GGTTGATATTAGTTCTCAAATCTTCGGTTTTTGAGTTCTTCATTCATGCT TTATCATAGCAAATATCTTTAGATTTTAGAGTATTTATTTTAACCGTTTG ACACGTAAAAAGAACTGTAAAATTAAATACACCAATCATGCCACAGACTC CAGTGACCGTATACTTAGAATAGCAATAGATTTGTTAATTGGGGAAAAAC AAAAGAAATTCTGACTGGTTCAATTAAATAGGATATTGTTGAAAAGGCGA ACGAAAAAAAAAACATCAA

Coding sequence (CDS) from alignment at sc0000146:46445..50113-

>TCONS_00012646 ID=TCONS_00012646|Name=TCONS_00012646|organism=Clytia hemisphaerica|type=CDS|length=6924bp|location=Sequence derived from alignment at sc0000146:46445..50113- (Clytia hemisphaerica)
GTCTGTGATTTGGATACACCAAGCAAGAGACGGAAATCTATTCGAGAATC
AAAGAAAAAGGATTGCCCAGCACAAATTCACATACGAACTGTACATCGTT
TCCCAACATATAATTGCATCAATAACATTCAACCAGTGAAATCAGAATCT
CGAACAACATATGTCAATAAATGTCAACGTGGTATGATTTTAGCGAAATT
ACGGGAGGACATTGTTAATGATCAGGTTCATGGTGAACAAGGCTTTTGGA
TTCGTGTTCCTTTACCAGAAGTTCACCAGAACCATTCTCTTGGGCCTTTT
GATGGTGATGATCCACCCTTAACTGAAGACACTATTCTGGAAATGAAAAC
CTTACTTCATGATGCTGCGATTTCTTCTACTTCATAAGTCAAATCAAATG
GGAAAAGAATATTGGGGTACCTCCGATCCCATTTACCGGTGTTCCTTTCA
CAACTGAAGGCAGTACCACTTATCAATGTGTATTTGGACCTAAAAGAGCT
AAAATGTCGAAGGAGAACAACGATGTTGAAGAAGATGATTGAGCCTGTTC
CAGAAAGGAATGCATCAAACGACATGACAGAGTTGTTAGGCTTGACTGCA
CTGAATGTCAAAACCATTCAATTGTCTAAGAAATATCTCGAACACATTGT
AAAGGAAGGATATTACATTTCTGGCTTCATAGATGGTACTGATAAATTGG
ATGAATTTCTGAAGTTCTTTCGAATCATCACAGGGTCGGCATTTTCGATT
CGTAGGTCAAAGTCCAAAATTAATGATGACCCAGAACCAGAGGATAAGCC
TCTTCGTAAATACAAGCCAGGTTATCTTGGAAAAGATGGCGACGGCAAGA
AAACTAACCAAAAGTATCGATGACCTTTCTAGCAGTGAAGCTTCAGCTGC
TGAAATCATCTCAAAAATGTCAGAATACCAATTTATAGCTGTTGTCCAAG
ATGGAAATGCATGCGAGCCTATGGAGCAAGTCGTGAATGAAAAAGGTGAG
GTAGTTGCTATAAATACAGATGAATATTATGAGACAATAGGACAAGCAGT
ACCTGTCGAGTTGAATTTTGAATCCGCTGATGCAGGAATTAACGAATTAA
AGAGACAAAACGGTGAAGGAATAAAAGAGGCTGATTCTAATGAAGAAGTG
ATTGCTCAGGAAGAGACTATTGAAAATGTTGAACAGGATGAAGGGGTAGA
ATCAGTTCCATCGGATGCTGAAATTATTGCAAGAATGGTTGTTGAGCGTG
AACAACTACAAGGTAACAATGAAAATGTAGCTGGGAATTTGAAGGATATG
TTGCTGCCACTTGGTATAAAAATACCAAATCATCAGAATATTATTGGAAC
TAAAAGAAAACGACCTAAAAGTTCCTTGTTTATTGGATGTTCACCTGAAG
CAACTCAAGTAATCAATGAATTTGATGCTCTTAAAGAACGCCTTCAGATC
AAAACAAATTTAGACATGCTAAAACATATGCTGAAGCTTGAAAAGAAATA
CTTAAATTCCACTGTTGTTACTACTGAGTGCATTGTTGACGATGGCAACA
AAAATACAAAGGCTATTTTGCAACTTCTGTCGACGTCGTCAGCAGCCACT
GACCATCATCAAACAAAAACATTGGATAATGAGATAATAACACCACGGTT
AGCAACAGATGAGCTGCATGGCAGTGATACGATGGAACCATCAGGCATAA
GAAATGAAGAAGTCACAATTAATATAATGAAGTCTGTGATTTGGATACAC
CAAGCAAGAGACGGAAATCTATTCGAGAATCAAAGAAAAAGGATTGCCCA
GCACAAATTCACATACGAACTGTACATCGTTTCCCAACATATAATTGCAT
CAATAACATTCAACCAGTGAAATCAGAATCTCGAACAACATATGTCAATA
AATGTCAACGTGGTATGATTTTAGCGAAATTACGGGAGGACATTGTTAAT
GATCAGGTTCATGGTGAACAAGGCTTTTGGATTCGTGTTCCTTTACCAGA
AGTTCACCAGAACCATTCTCTTGGGCCTTTTGATGGTGATGATCCACCCT
TAACTGAAGACACTATTCTGGAAATGAAAACCTTACTTCATGATGCTGCG
ATTTCTTCTACTTCATAAGTCAAATCAAATGGGAAAAGAATATTGGGGTA
CCTCCGATCCCATTTACCGGTGTTCCTTTCACAACTGAAGGCAGTACCAC
TTATCAATGTGTATTTGGACCTAAAAGAGCTAAAATGTCGAAGGAGAACA
ACGATGTTGAAGAAGATGATTGAGCCTGTTCCAGAAAGGAATGCATCAAA
CGACATGACAGAGTTGTTAGGCTTGACTGCACTGAATGTCAAAACCATTC
AATTGTCTAAGAAATATCTCGAACACATTGTAAAGGAAGGATATTACATT
TCTGGCTTCATAGATGGTACTGATAAATTGGATGAATTTCTGAAGTTCTT
TCGAATCATCACAGGGTCGGCATTTTCGATTCGTAGGTCAAAGTCCAAAA
TTAATGATGACCCAGAACCAGAGGATAAGCCTCTTCGTAAATACAAGCCA
GGTTATCTTGGAAAAGATGGCGACGGCAAGAAAACTAACCAAAAGTATCG
ATGACCTTTCTAGCAGTGAAGCTTCAGCTGCTGAAATCATCTCAAAAATG
TCAGAATACCAATTTATAGCTGTTGTCCAAGATGGAAATGCATGCGAGCC
TATGGAGCAAGTCGTGAATGAAAAAGGTGAGGTAGTTGCTATAAATACAG
ATGAATATTATGAGACAATAGGACAAGCAGTACCTGTCGAGTTGAATTTT
GAATCCGCTGATGCAGGAATTAACGAATTAAAGAGACAAAACGGTGAAGG
AATAAAAGAGGCTGATTCTAATGAAGAAGTGATTGCTCAGGAAGAGACTA
TTGAAAATGTTGAACAGGATGAAGGGGTAGAATCAGTTCCATCGGATGCT
GAAATTATTGCAAGAATGGTTGTTGAGCGTGAACAACTACAAGGTAACAA
TGAAAATGTAGCTGGGAATTTGAAGGATATGTTGCTGCCACTTGGTATAA
AAATACCAAATCATCAGAATATTATTGGAACTAAAAGAAAACGACCTAAA
AGTTCCTTGTTTATTGGATGTTCACCTGAAGCAACTCAAGTAATCAATGA
ATTTGATGCTCTTAAAGAACGCCTTCAGATCAAAACAAATTTAGACATGC
TAAAACATATGCTGAAGCTTGAAAAGAAATACTTAAATTCCACTGTTGTT
ACTACTGAGTGCATTGTTGACGATGGCAACAAAAATACAAAGGCTATTTT
GCAACTTCTGTCGACGTCGTCAGCAGCCACTGACCATCATCAAACAAAAA
CATTGGATAATGAGATAATAACACCACGGTTAGCAACAGATGAGCTGCAT
GGCAGTGATACGATGGAACCATCAGGCATAAGAAATGAAGAAGTCACAAT
TAATATAATGAAGTCTGTGATTTGGATACACCAAGCAAGAGACGGAAATC
TATTCGAGAATCAAAGAAAAAGGATTGCCCAGCACAAATTCACATACGAA
CTGTACATCGTTTCCCAACATATAATTGCATCAATAACATTCAACCAGTG
AAATCAGAATCTCGAACAACATATGTCAATAAATGTCAACGTGGTATGAT
TTTAGCGAAATTACGGGAGGACATTGTTAATGATCAGGTTCATGGTGAAC
AAGGCTTTTGGATTCGTGTTCCTTTACCAGAAGTTCACCAGAACCATTCT
CTTGGGCCTTTTGATGGTGATGATCCACCCTTAACTGAAGACACTATTCT
GGAAATGAAAACCTTACTTCATGATGCTGCGATTTCTTCTACTTCATAAG
TCAAATCAAATGGGAAAAGAATATTGGGGTACCTCCGATCCCATTTACCG
GTGTTCCTTTCACAACTGAAGGCAGTACCACTTATCAATGTGTATTTGGA
CCTAAAAGAGCTAAAATGTCGAAGGAGAACAACGATGTTGAAGAAGATGA
TTGAGCCTGTTCCAGAAAGGAATGCATCAAACGACATGACAGAGTTGTTA
GGCTTGACTGCACTGAATGTCAAAACCATTCAATTGTCTAAGAAATATCT
CGAACACATTGTAAAGGAAGGATATTACATTTCTGGCTTCATAGATGGTA
CTGATAAATTGGATGAATTTCTGAAGTTCTTTCGAATCATCACAGGGTCG
GCATTTTCGATTCGTAGGTCAAAGTCCAAAATTAATGATGACCCAGAACC
AGAGGATAAGCCTCTTCGTAAATACAAGCCAGGTTATCTTGGAAAAGATG
GCGACGGCAAGAAAACTAACCAAAAGTATCGATGACCTTTCTAGCAGTGA
AGCTTCAGCTGCTGAAATCATCTCAAAAATGTCAGAATACCAATTTATAG
CTGTTGTCCAAGATGGAAATGCATGCGAGCCTATGGAGCAAGTCGTGAAT
GAAAAAGGTGAGGTAGTTGCTATAAATACAGATGAATATTATGAGACAAT
AGGACAAGCAGTACCTGTCGAGTTGAATTTTGAATCCGCTGATGCAGGAA
TTAACGAATTAAAGAGACAAAACGGTGAAGGAATAAAAGAGGCTGATTCT
AATGAAGAAGTGATTGCTCAGGAAGAGACTATTGAAAATGTTGAACAGGA
TGAAGGGGTAGAATCAGTTCCATCGGATGCTGAAATTATTGCAAGAATGG
TTGTTGAGCGTGAACAACTACAAGGTAACAATGAAAATGTAGCTGGGAAT
TTGAAGGATATGTTGCTGCCACTTGGTATAAAAATACCAAATCATCAGAA
TATTATTGGAACTAAAAGAAAACGACCTAAAAGTTCCTTGTTTATTGGAT
GTTCACCTGAAGCAACTCAAGTAATCAATGAATTTGATGCTCTTAAAGAA
CGCCTTCAGATCAAAACAAATTTAGACATGCTAAAACATATGCTGAAGCT
TGAAAAGAAATACTTAAATTCCACTGTTGTTACTACTGAGTGCATTGTTG
ACGATGGCAACAAAAATACAAAGGCTATTTTGCAACTTCTGTCGACGTCG
TCAGCAGCCACTGACCATCATCAAACAAAAACATTGGATAATGAGATAAT
AACACCACGGTTAGCAACAGATGAGCTGCATGGCAGTGATACGATGGAAC
CATCAGGCATAAGAAATGAAGAAGTCACAATTAATATAATGAAGTCTGTG
ATTTGGATACACCAAGCAAGAGACGGAAATCTATTCGAGAATCAAAGAAA
AAGGATTGCCCAGCACAAATTCACATACGAACTGTACATCGTTTCCCAAC
ATATAATTGCATCAATAACATTCAACCAGTGAAATCAGAATCTCGAACAA
CATATGTCAATAAATGTCAACGTGGTATGATTTTAGCGAAATTACGGGAG
GACATTGTTAATGATCAGGTTCATGGTGAACAAGGCTTTTGGATTCGTGT
TCCTTTACCAGAAGTTCACCAGAACCATTCTCTTGGGCCTTTTGATGGTG
ATGATCCACCCTTAACTGAAGACACTATTCTGGAAATGAAAACCTTACTT
CATGATGCTGCGATTTCTTCTACTTCATAAGTCAAATCAAATGGGAAAAG
AATATTGGGGTACCTCCGATCCCATTTACCGGTGTTCCTTTCACAACTGA
AGGCAGTACCACTTATCAATGTGTATTTGGACCTAAAAGAGCTAAAATGT
CGAAGGAGAACAACGATGTTGAAGAAGATGATTGAGCCTGTTCCAGAAAG
GAATGCATCAAACGACATGACAGAGTTGTTAGGCTTGACTGCACTGAATG
TCAAAACCATTCAATTGTCTAAGAAATATCTCGAACACATTGTAAAGGAA
GGATATTACATTTCTGGCTTCATAGATGGTACTGATAAATTGGATGAATT
TCTGAAGTTCTTTCGAATCATCACAGGGTCGGCATTTTCGATTCGTAGGT
CAAAGTCCAAAATTAATGATGACCCAGAACCAGAGGATAAGCCTCTTCGT
AAATACAAGCCAGGTTATCTTGGAAAAGATGGCGACGGCAAGAAAACTAA
CCAAAAGTATCGATGACCTTTCTAGCAGTGAAGCTTCAGCTGCTGAAATC
ATCTCAAAAATGTCAGAATACCAATTTATAGCTGTTGTCCAAGATGGAAA
TGCATGCGAGCCTATGGAGCAAGTCGTGAATGAAAAAGGTGAGGTAGTTG
CTATAAATACAGATGAATATTATGAGACAATAGGACAAGCAGTACCTGTC
GAGTTGAATTTTGAATCCGCTGATGCAGGAATTAACGAATTAAAGAGACA
AAACGGTGAAGGAATAAAAGAGGCTGATTCTAATGAAGAAGTGATTGCTC
AGGAAGAGACTATTGAAAATGTTGAACAGGATGAAGGGGTAGAATCAGTT
CCATCGGATGCTGAAATTATTGCAAGAATGGTTGTTGAGCGTGAACAACT
ACAAGGTAACAATGAAAATGTAGCTGGGAATTTGAAGGATATGTTGCTGC
CACTTGGTATAAAAATACCAAATCATCAGAATATTATTGGAACTAAAAGA
AAACGACCTAAAAGTTCCTTGTTTATTGGATGTTCACCTGAAGCAACTCA
AGTAATCAATGAATTTGATGCTCTTAAAGAACGCCTTCAGATCAAAACAA
ATTTAGACATGCTAAAACATATGCTGAAGCTTGAAAAGAAATACTTAAAT
TCCACTGTTGTTACTACTGAGTGCATTGTTGACGATGGCAACAAAAATAC
AAAGGCTATTTTGCAACTTCTGTCGACGTCGTCAGCAGCCACTGACCATC
ATCAAACAAAAACATTGGATAATGAGATAATAACACCACGGTTAGCAACA
GATGAGCTGCATGGCAGTGATACGATGGAACCATCAGGCATAAGAAATGA
AGAAGTCACAATTAATATAATGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007093XLOC_007093Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012646-exon-sc0000146-1575043694:49135..50113TCONS_00012646-exon-sc0000146-1575043694:49135..50113Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1575043694:48360..48655TCONS_00012646-exon-sc0000146-1575043694:48360..48655Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1575043694:47855..48006TCONS_00012646-exon-sc0000146-1575043694:47855..48006Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1575043694:46445..47353TCONS_00012646-exon-sc0000146-1575043694:46445..47353Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1510915933:49135..50113TCONS_00012646-exon-sc0000146-1510915933:49135..50113Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1510915933:48360..48655TCONS_00012646-exon-sc0000146-1510915933:48360..48655Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1510915933:47855..48006TCONS_00012646-exon-sc0000146-1510915933:47855..48006Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1510915933:46445..47353TCONS_00012646-exon-sc0000146-1510915933:46445..47353Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1491911889:49135..50113TCONS_00012646-exon-sc0000146-1491911889:49135..50113Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1491911889:48360..48655TCONS_00012646-exon-sc0000146-1491911889:48360..48655Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1491911889:47855..48006TCONS_00012646-exon-sc0000146-1491911889:47855..48006Clytia hemisphaericaexon
TCONS_00012646-exon-sc0000146-1491911889:46445..47353TCONS_00012646-exon-sc0000146-1491911889:46445..47353Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012646-proteinTCONS_00012646-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000146supercontigsc0000146:46445..50113 -
Expression

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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.0855 23.9426 8.45473 6.56704 21.8862 16.6193 19.7998 19.7548 13.8055 11.6823 12.9305 10.4421 8.67484 9.86374 9.49023 10.6737 10.3051 11.1014 5.5675 5.71467 11.6759 10.6429 27.5012 23.6638 16.207 17.7887 11.8473 10.8131 19.661 22.8465
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029309CaRF
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012646 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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