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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012662 ID=TCONS_00012662|Name=TCONS_00012662|organism=Clytia hemisphaerica|type=transcript|length=1712bp
CAATTTAAATTATCTGATATATTTTgcttattttgcaaaataacttaAGT
AGTTTTTTTCATAAGGAAGATATCAATTAATATTGCTTACATAGACTATT
ATTGTTCTAGGTATCTTAAAATATTGCAGTAATTACACTAGATTTGAAAA
CCTATAAAAAGACTTCACAAACCTCAATTTAATCTGTACAACATTTTTCA
CTAGAAAATGGCAGAGCAAAAATTGTCccaattgaaaatcaaaagtgTAG
AAATAAGAAAGTTCAATCCTAAAACAGATNATGGCAGAGCAAAAATTGTC
ccaattgaaaatcaaaagtgTAGAAATAAGAAAGTTCAATCCTAAAGCAG
ACGCAAAAAGATTGACTGAAATATGGGTTAATGGTTTGGACCAAACAGTT
GACTCCCAATGGTGGTGGAAACGTGCTTATTGGAGAGAACACTTCTCTCA
GTATGCAAAAGATGCAACTGCAGTTGATGGAGATATGGGCCCAGAAGGCA
CTAGTCTTGAAAAATTATGGTGTTTTGACGAAGAGAATGTACAAATGTTG
GTTGCTGAGCTCATATTTCAAGATCCAAAGATGGCACATCTTCTAGTTGG
AAGCATAGGAATCAAGAGAGGGTATGAGCACAGCAAAGATGGAACAATTT
TCACAATTTGGAAAATGTCAGTTGACATAAACTACAGAGGATATTCTATA
GGTGGAAAACTGTTATTAGCAGgagaaaaatgggcaaaacAAAAAGGAGG
CATGAAGATAACAGCAGCATCAATGAATCCGATAGCTagtaaattttatt
taaaacatGGTTATGAATGGTCGGAGTGGTCTTGGTGGGATTGGATTGTT
TTCAAATACATTGGATCAATGAGTGGGAAATTGCATGAAAAAACTTTAGA
GTGAATAACAACCTGGAAATCACCACATTGCAAAACCCTGACAAATTTTT
AGAACTCTAGAAATAAAACTCTTGTTTAACCTAGACTATTGAAGCTTTCT
GATCATGTAAAAACTATTATTAATGgtgatattttctttgaatttggtGA
TGGGGGGGATCAATAGATGTACCTGTACATGACATCTTCATTTTAATTTG
CTTCTTAACCCTTTGTGCATCTTAGGGTCTCCCCCCAAAATtgaagtttt
caaaaacttttctgaTCTTTATTCAACCTTCTTAAAATTTGACATTCTTT
GGTGAAAATCTTCGCATCattaattgatgacgtcattctaaCATATTTTG
GGTCAAAATTCTTTCACCTGCTGGTATCCTGTATTCTAATGACTTGTCAA
CAATTGCCCTTTTTGTCTGAATAACCCCTCGGTTACTGTATCCTGGGACT
GGAAATGCTTTTGGCTTGAAATTTAAAGTGGAGTTTTAAAGTtgcaaaaa
tctattttttctaGCCACCAGTTAAATTAAACCCCCCATgaaaaaaagtt
tacttttaACATACAAaatgttttacttgataatttACTCTTACTGGACA
GGTCTTCAGTAGTTTCATGAAAGATTAAAATAACCTATAGTAGATATTTC
AATATTCCTTGGGTGTATCCCCAGTTAAACTGTTgtgcaacgcactgggc
tcaacttctgTGGCTTCTAATTATTTAATATAGGTCTAAAATTGTAGGAa
caaaaaacaactaaaatagTGCCCAGGCTACAAAAATTAACATGCTTGGT
CGAGTGGAAAAT Run BLAST on NCBI protein sequence of TCONS_00012662-protein >TCONS_00012662-protein ID=TCONS_00012662-protein|Name=TCONS_00012662-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
MAEQKLSQLKIKSVEIRKFNPKADAKRLTEIWVNGLDQTVDSQWWWKRAY
WREHFSQYAKDATAVDGDMGPEGTSLEKLWCFDEENVQMLVAELIFQDPK
MAHLLVGSIGIKRGYEHSKDGTIFTIWKMSVDINYRGYSIGGKLLLAGEK
WAKQKGGMKITAASMNPIASKFYLKHGYEWSEWSWWDWIVFKYIGSMSGK
LHEKTLE Run BLAST on NCBI transcript from alignment at sc0000146:215330..217041 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012662 ID=TCONS_00012662|Name=TCONS_00012662|organism=Clytia hemisphaerica|type=transcript|length=1712bp|location=Sequence derived from alignment at sc0000146:215330..217041 (Clytia hemisphaerica)
ATTTTCCACTCGACCAAGCATGTTAATTTTTGTAGCCTGGGCActatttt
agttgttttttgtTCCTACAATTTTAGACCTATATTAAATAATTAGAAGC
CAcagaagttgagcccagtgcgttgcacAACAGTTTAACTGGGGATACAC
CCAAGGAATATTGAAATATCTACTATAGGTTATTTTAATCTTTCATGAAA
CTACTGAAGACCTGTCCAGTAAGAGTaaattatcaagtaaaacattTTGT
ATGTtaaaagtaaactttttttcATGGGGGGTTTAATTTAACTGGTGGCt
agaaaaaatagatttttgcaACTTTAAAACTCCACTTTAAATTTCAAGCC
AAAAGCATTTCCAGTCCCAGGATACAGTAACCGAGGGGTTATTCAGACAA
AAAGGGCAATTGTTGACAAGTCATTAGAATACAGGATACCAGCAGGTGAA
AGAATTTTGACCCAAAATATGttagaatgacgtcatcaattaatGATGCG
AAGATTTTCACCAAAGAATGTCAAATTTTAAGAAGGTTGAATAAAGAtca
gaaaagtttttgaaaacttcaATTTTGGGGGGAGACCCTAAGATGCACAA
AGGGTTAAGAAGCAAATTAAAATGAAGATGTCATGTACAGGTACATCTAT
TGATCCCCCCCATCaccaaattcaaagaaaatatcacCATTAATAATAGT
TTTTACATGATCAGAAAGCTTCAATAGTCTAGGTTAAACAAGAGTTTTAT
TTCTAGAGTTCTAAAAATTTGTCAGGGTTTTGCAATGTGGTGATTTCCAG
GTTGTTATTCACTCTAAAGTTTTTTCATGCAATTTCCCACTCATTGATCC
AATGTATTTGAAAACAATCCAATCCCACCAAGACCACTCCGACCATTCAT
AACCatgttttaaataaaatttactAGCTATCGGATTCATTGATGCTGCT
GTTATCTTCATGCCTCCTTTTTgttttgcccatttttctcCTGCTAATAA
CAGTTTTCCACCTATAGAATATCCTCTGTAGTTTATGTCAACTGACATTT
TCCAAATTGTGAAAATTGTTCCATCTTTGCTGTGCTCATACCCTCTCTTG
ATTCCTATGCTTCCAACTAGAAGATGTGCCATCTTTGGATCTTGAAATAT
GAGCTCAGCAACCAACATTTGTACATTCTCTTCGTCAAAACACCATAATT
TTTCAAGACTAGTGCCTTCTGGGCCCATATCTCCATCAACTGCAGTTGCA
TCTTTTGCATACTGAGAGAAGTGTTCTCTCCAATAAGCACGTTTCCACCA
CCATTGGGAGTCAACTGTTTGGTCCAAACCATTAACCCATATTTCAGTCA
ATCTTTTTGCGTCTGCTTTAGGATTGAACTTTCTTATTTCTAcacttttg
attttcaattggGACAATTTTTGCTCTGCCATNATCTGTTTTAGGATTGA
ACTTTCTTATTTCTAcacttttgattttcaattggGACAATTTTTGCTCT
GCCATTTTCTAGTGAAAAATGTTGTACAGATTAAATTGAGGTTTGTGAAG
TCTTTTTATAGGTTTTCAAATCTAGTGTAATTACTGCAATATTTTAAGAT
ACCTAGAACAATAATAGTCTATGTAAGCAATATTAATTGATATCTTCCTT
ATGAAAAAAACTACTtaagttattttgcaaaataagcAAAATATATCAGA
TAATTTAAATTG Coding sequence (CDS) from alignment at sc0000146:215330..217041 >TCONS_00012662 ID=TCONS_00012662|Name=TCONS_00012662|organism=Clytia hemisphaerica|type=CDS|length=624bp|location=Sequence derived from alignment at sc0000146:215330..217041 (Clytia hemisphaerica)
TCACTCTAAAGTTTTTTCATGCAATTTCCCACTCATTGATCCAATGTATT
TGAAAACAATCCAATCCCACCAAGACCACTCCGACCATTCATAACCatgt
tttaaataaaatttactAGCTATCGGATTCATTGATGCTGCTGTTATCTT
CATGCCTCCTTTTTgttttgcccatttttctcCTGCTAATAACAGTTTTC
CACCTATAGAATATCCTCTGTAGTTTATGTCAACTGACATTTTCCAAATT
GTGAAAATTGTTCCATCTTTGCTGTGCTCATACCCTCTCTTGATTCCTAT
GCTTCCAACTAGAAGATGTGCCATCTTTGGATCTTGAAATATGAGCTCAG
CAACCAACATTTGTACATTCTCTTCGTCAAAACACCATAATTTTTCAAGA
CTAGTGCCTTCTGGGCCCATATCTCCATCAACTGCAGTTGCATCTTTTGC
ATACTGAGAGAAGTGTTCTCTCCAATAAGCACGTTTCCACCACCATTGGG
AGTCAACTGTTTGGTCCAAACCATTAACCCATATTTCAGTCAATCTTTTT
GCGTCTGCTTTAGGATTGAACTTTCTTATTTCTAcacttttgattttcaa
ttggGACAATTTTTGCTCTGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012662-exon-sc0000146-1491911889:215330..217041 | TCONS_00012662-exon-sc0000146-1491911889:215330..217041 | Clytia hemisphaerica | exon |
| TCONS_00012662-exon-sc0000146-1510915933:215330..217041 | TCONS_00012662-exon-sc0000146-1510915933:215330..217041 | Clytia hemisphaerica | exon |
| TCONS_00012662-exon-sc0000146-1575043694:215330..217041 | TCONS_00012662-exon-sc0000146-1575043694:215330..217041 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000146 | supercontig | sc0000146:215330..217041 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008080 | N-acetyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008080 |
N-acetyltransferase activity |
Blast
The following BLAST results are available for this feature:
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