TCONS_00012757 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012757
Unique NameTCONS_00012757
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length351

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012757 ID=TCONS_00012757|Name=TCONS_00012757|organism=Clytia hemisphaerica|type=transcript|length=351bp
ACCTGAATTCTAACGTGATCGCCAGCGCCTCTGCCATCTTTGAAGTTTTG
AACTTTAGATTTTGTTTGGTGAGTACTGTACTTACCAATCCAAAATCGCC
CTTAAcagtcaaactttttttctgagaaCTGATTGGTTCATTTAGGTCAA
TTACGATTACATcataatttttagttttaaatcAATCAGATCGATTTGat
tattaaaaaacttttggaaaggtgaaaaaaccgacccttaccgtccgcac
atacccatcatccatttttgcctaagtaccccccccctcccGGGTGTCTT
TGCTATAAAGATTTTAGAATTGGAGAATATAGGAACATTTTTATAAATGA
A
Run BLAST on NCBI

transcript from alignment at sc0000147:131646..131996

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012757 ID=TCONS_00012757|Name=TCONS_00012757|organism=Clytia hemisphaerica|type=transcript|length=351bp|location=Sequence derived from alignment at sc0000147:131646..131996 (Clytia hemisphaerica)
TTCATTTATAAAAATGTTCCTATATTCTCCAATTCTAAAATCTTTATAGC
AAAGACACCCgggagggggggggtacttaggcaaaaatggatgatgggta
tgtgcggacggtaagggtcggttttttcacctttccaaaagttttttaat
aatCAAATCGATCTGATTgatttaaaactaaaaattatgATGTAATCGTA
ATTGACCTAAATGAACCAATCAGttctcagaaaaaaagtttgactgTTAA
GGGCGATTTTGGATTGGTAAGTACAGTACTCACCAAACAAAATCTAAAGT
TCAAAACTTCAAAGATGGCAGAGGCGCTGGCGATCACGTTAGAATTCAGG
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007154XLOC_007154Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012757-exon-sc0000147-1491911889:131646..131996TCONS_00012757-exon-sc0000147-1491911889:131646..131996Clytia hemisphaericaexon
TCONS_00012757-exon-sc0000147-1510915933:131646..131996TCONS_00012757-exon-sc0000147-1510915933:131646..131996Clytia hemisphaericaexon
TCONS_00012757-exon-sc0000147-1575043694:131646..131996TCONS_00012757-exon-sc0000147-1575043694:131646..131996Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000147supercontigsc0000147:131646..131996 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.11104	1.20434	2.30224	2.05242	0.862836	1.12337	0.814953	2.23975	0.413379	1.44139	0.283173	0	0.312676	1.25249	0.727605	0.42729	0.2471	0.569782	0	0.410176	0	1.85111	1.08454	0.291906	0.923633	1.85277	0.740266	0.547208	1.11343	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012757 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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