TCONS_00012818 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012818
Unique NameTCONS_00012818
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4534

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012818 ID=TCONS_00012818|Name=TCONS_00012818|organism=Clytia hemisphaerica|type=transcript|length=4534bp
CAAGAAAAAAGAGGGTCTTGAAGCTTGTCTAAAAGACAGTGAAAACAATA
ACGCGCGTAAAGAGCGTGCAATGGTGGACTTAAAAAATGAGAAAGTTGCT
TTGGATAGCTTAGTAGCCACACTCAAAGAGGAGATCAATATGCTAGAGAA
GGAGCGTACGCGTGATGTGGAGGATAAGAGACACATCGAGGAGGAGCTGG
AGGACCTGAGAGATCGAAATATTATTTTGGAAACAGAATGGTCGTGCTGT
AAAGAAGAAAATAGTTTGCTGGAGAATGAACTCAATGCTCTGGAAGAAGA
TAAAGCCTACCTTGAGGATGAGATCGGAAAGTATCGTGAAGACGTCAAAA
TGCTGGAAGAAGCTCTATCCACACTTGAAGCACAGGCTGCGGATTATAAG
AAAGATATTGTGGCCTTGAAAAACAAGGAGGATCGACTTATAGTCAGtat
tcgaaatgaaaaagacaAATTCAATAAAGAGTTGAATTCACTACGTCAGG
AAATGAGTACGTTACGTGTTGAACGACGTCGTACGCAACGGGAGATTTCC
GTATCACGGGCCGATAAGAGCAATACCGAACGAGCGTACAACGCGCTGAA
ATCACAAAAAGACTCTTTGCAGGATGATGTTGTGTCTTATAAACAGGAGG
AAAAGAGGCTACAACGTGAAATATCCAGTCTGAAAAATGACAAAGCAAAA
CTAGAAAGGGATGTCAATAActtgaaaagtgaaaatatcaaattgaaaaa
tgaactaCAACATGTCGATAAAATGAAATGTGATTTGAAAATGTTGCAGA
AAAACGAAGATCGAATCGCGTCGATGTTTAGTATCGAAAAAGATCGATTG
GTCGAAAATCTTGTGCATTTTAAAGAGAAATACAACCGAATGGAACTCGA
TTTCAATAAAATATGTACTGAAAAAGATAAACTTGTGAAACAGTTAAAAC
GCTTTGAAAACAAACATGATGAATCGGAAAACTCAGCACGTCGCTCTCAA
AGTCAACCTACAAAAGCCTCCACACCTGATAACAGgactaaaaatctaaa
atcggcCGCTTCTATGCATGGCATGCTTGCGCGGAGAAGTGTACACTCAG
GTGAGGTATCTGAAGTGGAAGGCAAGGTGTTAGACTTACAAAGACGATTA
GCTTTCTTTATGGCAGAAAAGGAAGATATTCAAAAAGAACTGATAACGAC
CAGAGAAAGAAATACAAAGCTCACGGATGAGTTAAAATTTCTAGAGGATG
ATACGTCTAAAATTCAGACACTTCTTTCCACGCTAGCGGACGAAAAATCT
AGCCTAGAAACCAAGCTCAATAAAGCTTCGGAATCGAGAGCTATTCTTGA
AAAAGAGAGAGATGAATTAAAAGGAGTCGTTACTATGGCTCATAAATTCA
CCACTGAACTACAACATCAACTGGATAGCGTCACCGAACAGAATCGTGTT
TTAGAAGTAGATCACGCCACCTTAAAAGAAAGCGTGAATGTTCTTCAAAA
CGAGGCTGTGATACTGACGAACGAGAATAAACATATAAGAATGGAGTTTG
AGAAAGTGGATGGTGATTTGAATTCTACGAGGTCTATGGTAGAAGAAATG
AATACCAAGATCACAGACcttaaaaagaaagtaaagaacGCCAATGATAA
CGAATTCTTGTTGCATGATAAGCTATCAAATTTGGAGACAGAGAACGTTT
CGCTTTCACAACAAGTGGATGTGTGCCATCAAGAAGAAGATCTACTGACT
AAGCAACTTGTCTTCTTACACGAGAAATTCAATACACTGGAAAAAGCTCT
TCACAATAttgccgaaaacgaaagtgatgcAGAGgCATTAGAGAAAGTGA
AAGAACTGAAGATGGCAAATTCGTCATTGCGCAGCACGATCAACGAGTTG
AAGAGAGAATTGGAAGCGGTTGTCTTAGATGCTGAATGTTTGAAAGATGA
AAGAGAAGAGattgaaaaattacttcaagTTGACAGCAAAGAAAACTTGT
CTCAAACAGGCTCGTTGTTCGACAATATTTGTCGGTTGAAGACacaagtt
ttgaaagtgaaacAAGAGAAGATACATATCGAAGAGAAAATGAAACTGAT
TGAAGTTCAACTCATCTCGCTTGGTCATAAGAACGAAACACTGGAAAAAG
ACAGTGTGGAGAAGAGTTCAAGACTTGAACAAGAAAAAGCCAACTATCGA
CAACACATCGATAAACTACAACAACAAATTGAAGAACTCGTTCGCGAGCG
AATACAACTCGAAGCTGAAGTTGAATTTCTAAAGAAACAGAATTCAGAGC
TACATCGTGATATAGTCATTATTTTGGATGAGAATAGTAAACTGGAATCT
GAGCTACAAGACTTGGAAGCAGAGTTTGGTAAGCAGGAACAAGACCTAGA
ATCAGCAACTGAAGAGACCAAACTTCTTCTCAGACAATTATGTTCAGCAG
AAACACAGAATTTGAATCTGAACATGCAACAAAGCACCAACCAAGACGAT
TTGGAGCGAGCTCAACAACAAGTGCAAGAATTACAACGTGAAAAAGAGAG
ATTGAGTGAAGAACATCTCTCTAAAGATCAGCAAACAAAAACACTGAAGG
ATCGTTTGTTGATGGCTGAACTTGAAATCTCACaattgaaatctgaacat
tgtATGGTCGAGAGTCAGCGGAGAACGTTAGCGCGCAACTTAGATGCTGC
CGACCAAGAACGAGCCTTGTTGAAAAATGAACTCCAAGGTCTGGCACGTG
CTTTGTCTCCTCTAAAGAAAGAAGTCTGCCAAGTGGTCAAAAAACAACAC
AGTCTCCTTgacaacaataacaataaagatAACGTCACTGATGATCGTGG
TTGCCAAGACAACAACGATGAAGCCGTGACCGAGGATAATGATGATGTCA
ttccaaaagaaaatgaagcTGGTCTTGATTTACCGGATGAgGTCAATCGA
ATGAAAGAGGATTTGACGTCATTCAACGAAGAAAAATCAGCCTTGGAAAT
AGAACAAGGCCGTTTGGAAACGAGGCTGAAAGAGATTGGGGACGAAAAAG
ATGATTTGAGATCCAAACTAAGGGATTTGATACAAGATTTGGACGAGAGC
AATAAATTAGCATCTAAAGAAAATTTGTCAGAAATGGAGGACTCCATTCG
CATGATCAGCTCTTTAATGAGTGACAGCGAAACATTGGATCACGAAAAGG
TAATATTATCTGATGACGTCACAGACGCTCACTATGACAACAAGATACTA
ACCATACGCGTTGATAACCTTAATACAGAGCTTCGTTCAGTGCAAGAAGA
TCTCAGTTTGGCGACGGTCGATCGATTGAAGTTGAAGGATCAATGGAGGA
TGACTCCACCCATCTTTGAACCAATCCCAAGACACCGTGCAATGACCACG
CCCTTACGACGTACGTCTGACAGTGACGATGAAATTGTCCGTCCAAAACC
ACGGCCAAACAGTTGTGTCGGGATTTACACCATCAATTTTCCAACTTCCA
CATTGGTTCGTTCTAACACGACAACATCCGTTACCACTCCCCAAGTGGCA
CGTCTAATGGCAATGTCTTCAAGCAGCAGTCGTTTAAGTCGGAAATACCG
CATTGCTGAGCAAGAACGTTCCGCTGTTAAGCGTACCCGGCGTCCATTGG
CTTTACGGATGCGAAGATACCGTGATTTGCTTGTCTTTGGGAATTGCGCC
GGAAAGACTCGAAAATGACTAATGGtgattttcattatttcatttgtttt
tttaatatttttatttagctGTTTTTTCGTTAATTTTTATGACATTTCTC
CCTACTTCTAGGGAGTCTTTGAATTTAGGTTTGATAATAACAGACCTCTA
TGAGATTACTTTTCATCCTCATAGATTTAAATCTAACTTATGAATTATAT
TaagatttgttttgaaatagttTATGTTGGTTCCGTTTGCATTCATCGAG
TTTTATCATTTCTCGTGTTTTCTCCCTTTTCTAAATGATTCTGTCTCACT
CAATAGACTTGGTTGAAAACCAACGTCGGCTTTTTTTAATAATCAAGATA
TAATTCCAAATTATCCTACTGATATTTCTTTGTTGATATTTTCTGTACAT
TATCATTTCTTGTGTTTGTTAAGTCAAATCCGCCGCTCaccattattttt
cttttggatTTACTTTTCACTTGGGTCCTGCTGTGCGGGAACCGTTTCTT
AATCAATTTATGCCATATCCAACATTTGGCTTTCAAATATTGGTTTTCTG
GATTGGCTATTCCAAATTGGCGTCATACTTTCACATTCTTTATAGAAACT
TTGATAACATCACCTTCTTTGTTCGACTTTTCCGACACAAGAAATTTAAG
CACTCTTCGAGTATaatattgtaaaatattttttaaaccaTAAAATTTAA
ACAAGTCATCAATAATTTTAATACCGTCAATATTTTATCTTACAatttat
ttctcattttatATAAATTCTGTCATGTAGTGTACATTAAagtgttcaaa
gtttttttttttcgatgtaaagttttttgctaga
Run BLAST on NCBI

transcript from alignment at sc0000156:245832..258489-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012818 ID=TCONS_00012818|Name=TCONS_00012818|organism=Clytia hemisphaerica|type=transcript|length=12658bp|location=Sequence derived from alignment at sc0000156:245832..258489- (Clytia hemisphaerica)
CAAGAAAAAAGAGGGTCTTGAAGCTTGTCTAAAAGACAGTGAAAACAATA
ACGCGCGTAAAGAGCGTGCAATGGTGGACTTAAAAAATGAGAAAGTTGCT
TTGGATAGCTTAGTAGCCACACTCAAAGAGGAGATCAATATGCTAGAGAA
GGAGCGTACGCGTGATGTGGAGGATAAGAGACACATCGAGGAGGAGCTGG
AGGACCTGAGAGATCGAAATATTATTTTGGAAACAGAATGGTCGTGCTGT
AAAGAAGAAAATAGTTTGCTGGAGAATGAACTCAATGGTAAGTTGGTGTT
CAGGGCTACGTTTTGGGGTGATGGTTGTATCTTTAACTTTTTTTTTTAAA
TAAAAATACCCTTTCAAGGGTTTCACCGCACATATCATCAGTGGACAGGA
TGAAATGAGATTTTCTTTGTAAACAAACATAACCGCTCCTCTGTAATGAT
TAGGATCTTTATATCTTGCCAAATTTCTTTTATAAGAAAATACTTACTGG
GAGTTTTCCCAATCGTCGCTGTGAAATAAGTAGCAAACTTTAGAATTTGT
AAAAAAAAAGCTGTGTAATTTAGATTAAATCTTCGAATATCATGTATGGC
ACTTTGCCGGGGAGAGTGGTTTAAACATGTTTTATATTAGTATACAACTT
AGTCTTGATTCGCACATTATCGCGAAAAGTAAACACTTGTTTTATAAACT
AAAACCAACATATTATACACTTTTTCTATAAATCCCTTCCTACATGTCAA
AAACTGAAAGAACATACTCTGATAGATGACTGATAAGCATCGAGTTTATC
GAAGGTTGGCGATGTTTATCTTAAACTTATTCTCCTTTCTTTCAGCTCTG
GAAGAAGATAAAGCCTACCTTGAGGATGAGATCGGAAAGTATCGTGAAGA
CGTCAAAATGCTGGAAGAAGCTCTATCCACACTTGAAGCACAGGCTGCGG
ATTATAAGAAAGATATTGTGGCCTTGAAAAACAAGGAGGATCGACTTATA
GTCAGTATTCGAAATGAAAAAGACAAATTCAATAAAGAGTTGAATTCACT
ACGTCAGGAAATGAGTACGTTACGTGTTGAACGACGTCGTACGCAACGGG
AGATTTCCGTATCACGGGCCGATAAGAGCAATACCGAACGAGCGTACAAC
GCGCTGAAATCACAAAAAGACTCTTTGCAGGATGATGTTGTGTCTTATAA
ACAGGAGGAAAAGAGGCTACAACGTGAAATATCCAGTCTGAAAAATGACA
AAGCAAAACTAGAAAGGGATGTCAATAACTTGAAAAGTGAAAATATCAAA
TTGAAAAATGAACTACAACATGTCGATAAAATGAAATGTGATTTGAAAAT
GTTGCAGAAAAACGAAGATCGAATCGCGTCGATGTTTAGTATCGAAAAAG
ATCGATTGGTCGAAAATCTTGTGCATTTTAAAGAGAAATACAACCGAATG
GAACTCGATTTCAATAAAATATGTACTGAAAAAGATAAACTTGTGAAACA
GTTAAAACGCTTTGAAAACAAACATGATGAATCGGAAAACTCAGCACGTC
GCTCTCAAAGTCAACCTACAAAAGCCTCCACACCTGATAACAGGACTAAA
AATCTAAAATCGGCCGCTTCTATGCATGGCATGCTTGCGCGGAGAAGTGT
ACACTCAGGTGAGGTATCTGAAGTGGAAGGCAAGGTGTTAGACTTACAAA
GACGATTAGCTTTCTTTATGGCAGAAAAGGAAGATATTCAAAAAGAACTG
ATAACGACCAGAGAAAGAAATACAAAGCTCACGGATGAGTTAAAATTTCT
AGAGGATGATACGTCTAAAATTCAGACACTTCTTTCCACGCTAGCGGACG
AAAAATCTAGCCTAGAAACCAAGCTCAATAAAGCTTCGGAATCGAGAGCT
ATTCTTGAAAAAGAGAGAGATGAATTAAAAGGAGTCGTTACTATGGCTCA
TAAATTCACCACTGAACTACAACATCAACTGGATAGCGTCACCGAACAGA
ATCGTGTTTTAGAAGTAGATCACGCCACCTTAAAAGAAAGCGTGAATGTT
CTTCAAAACGAGGCTGTGATACTGACGAACGAGAATAAACATATAAGAAT
GGAGTTTGAGAAAGTGGATGGTGATTTGAATTCTACGAGGTCTATGGTAG
AAGAAATGAATACCAAGATCACAGACCTTAAAAAGAAAGTAAAGAACGCC
AATGATAACGAATTCTTGTTGCATGATAAGGTACAGATTGCATTCCTTTT
TTTACTCTCTTCCACGATGATAGAATGAAACAAATGTTGTTTGCGCTCTA
CTTTTTCCAATTTTCTGAAAAACTCGCAATTTGCTTTACATGCATTACTT
GGAATCTCATGTTGTTGCAATTTGTGTATAGTAAGACTATAAGAACAATT
TTCCTCATTCATTATTTTCTGGAATGATAAATTTTTTTTATCATTCAACA
TTTTAGCTATCAAATTTGGAGACAGAGAACGTTTCGCTTTCACAACAAGT
GGATGTGTGCCATCAAGAAGAAGATCTACTGACTAAGCAACTTGTCTTCT
TACACGAGAAATTCAATACACTGGAAAAAGCTCTTCACAATATTGCCGAA
AACGAAAGTGATGCAGAGGTAATATGGTGTATTTTGGTTCTGAAACATTT
AAGACACTTGAAACTTTCTAAGGCCATTAGTTCAAAATTTCGTTCTCTTA
AAATGAGAAATAACTGATTTTTTTCTCAATTATCGCTAAATATTCGCGTT
ACATGAATATTTCATGTGCAAAAGAATGGTCATTAGGTCTGATAACCTGA
TATTGTTCATTATTGAACTAGGATGTCAATTCACCTACTGATTGTATATG
ACGACAGTTTCTAATTCTATATTGCTACAAGGATGAATGGGTGACTGCAT
GGGACTAGTTTAGGATGCGGGATAAATTTTAAAACGGTGGTTAGCCCGGG
GCGGAGTAAGCAGTGGCGGACGTTTGTTCCAAACTCTACCGCCCCTTTTT
CTGAGTCCCTGACTATGCGCATTTATATTTTCCCGTGTTTTCTCTAACGG
AAGATAGCATCGTCTACCAGTTCTGCTGCCTGATATCAGATCAGCGATTT
AACCGCATATCCACATTTATTCTTCTGTCTGTTTATTAAGTTTTAGGTTA
ACGTAAAGGTTGCGCTACTCTTCATTTTTCTCAAATTTTAATTTCATCAA
TTTTCAGGCATTAGAGAAAGTGAAAGAACTGAAGATGGCAAATTCGTCAT
TGCGCAGCACGATCAACGAGTTGAAGAGAGAATTGGAAGCGGTTGTCTTA
GATGCTGAATGTTTGAAAGATGAAAGAGAAGAGATTGAAAAATTACTTCA
AGTTGACAGCAAAGAAAACTTGTCTCAAACAGGTTCGTTGATTATGTATT
TCTAAGAGAAGAGTTTTTGATGATGAAAGTCTTTGGTTTGTAGGTTTTTC
GAGAGTGACTGTATTATAGCTGTTTAGAAGGACTCACACTCACACAAAGA
AATTCTGTTATGATGACCAATTCATTTCGATGAGTGAGAATATCCTTATA
ACTCAAGATTTTACCTCCCCCCTTGCTTATGGTCAACTATACTTTTCCAG
GCTCGTTGTTCGACAATATTTGTCGGTTGAAGACACAAGTTTTGAAAGTG
AAACAAGAGAAGATACATATCGAAGAGAAAATGAAACTGATTGAAGTTCA
ACTCATCTCGCTTGGTCATAAGAACGAAACACTGGAAAAAGACAGTGTGG
TGAGTCCCATTGACTAAACATGTTGTCCTAATTAGAAAAGCTGTCTCTGT
ATTCAGATTCCATTCGCAAAATTATATAACTTTTCCCGTAAAATACAAAA
TTAAAAATACCAAATGATTAGAAGACTTGTTGATTTTAGTTAGAAAGGAT
ACAAACCCCTAGTCTACACGATAGACAACTCCAGTCTTAGAAGAGTAGGA
ATTTTACGCTCGAAACGTAGGAATCTAACCTAATAAATCCCTTCACTAAA
TTAAAATAAAATTAACATATTCCCAAAAAGCTGTTAATTCTGTTAAAATC
TGGTAGTTTGTAAAAAAACCCTCGGTCTTTGTTTTCTTTCAAGGAGAAGA
GTTCAAGACTTGAACAAGAAAAAGCCAACTATCGACAACACATCGATAAA
CTACAACAACAAATTGAAGAACTCGTTCGCGAGCGAATACAACTCGAAGC
TGAAGTTGAATTTCTAAAGAAACAGAATTCAGAGCTACATCGTGATATAG
TCATTATTTTGGATGAGAATAGTAAACTGGAATCTGAGCTACAAGACTTG
GAAGCAGAGTTTGGTAAGCAGGAACAAGACCTAGAATCAGCAACTGAAGA
GACCAAACTTCTTCTCAGGTAAGGATTTCACATTTTACTCACGATGCTTT
CAAGAGATTTGAGGAAACTATATTATTTTCAGGATATTAATCGTGATGCT
CTTTAGAGGGCGTGCGCCCTTTTTAGGCCTACCCCGGTGGAGGTCCTATA
AATTAACCTCTGTCCGTCCGTCCTTCCATTCGTTACCCACTTTTTGGACA
AAGATCTGTAACTATAAACCCTCGAATGTGACGGAGCCCGATTTTCAAAA
AAAAAAATTTGGGGGGCTAATTTGGGCCAAAAAACGGCTAAAAACGGCTA
AAAAACGGGTTTTTTGAACTTTGTGAAAAATTGAATCATTAATTTTTTCT
GATTTTTTGCATGAAAGTAGGTAAAAAAACGAATTTTTCAGCTCAAAAAC
GCATCTTTATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTT
AGTCAAATTACTCAATTATTTCATGAGATAGATGTTTTTTTGCCCATGAG
GGCTTACTTTTGAAGAATATGTGTGTTTAGACATGAAATTTTGGCTGCTT
GGCGTGTTTTTATAGAAAAACTGACCAAATTCGATATTTTTTTATAAGCA
CGAAGTCTTGAATGTGAAAGAATATTTCAAGAGCATAAAATTTTGGTTTC
TAAACGTTTTTTTATAAGAAACCAACGACAAATTTGAGTAGATCGTCACT
ATTTGTGTCCTGAATGATTGTTTAATGGTCACACTCACGTAGATATCAAT
TATATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAACTATCACTTG
TTATAATTTGAAATATCTATTTCAAGCATGTATCTGAGTTCAAGTAAAGA
ATACATATTTTACGACAATGCCAAATTTGGTTAACACCAAGAACAAGAGA
TTTAGGGGTTGATTCGTTCATCACTTTATTTTAGTTGATGAACGAATCAA
CCCCTAAATCGCTTGTTCTTGGTGTTAACCAAATTTTAAACTTTTCACCT
ACAGACAATTATGTTCAGCAGAAACACAGAATTTGAATCTGAACATGCAA
CAAAGCACCAACCAAGACGATTTGGAGCGAGCTCAACAACAAGTGCAAGA
ATTACAACGTGAAAAAGAGAGATTGAGTGAAGAACATCTCTCTAAAGATC
AGCAAACAAAAACACTGAAGGATCGTTTGTTGATGGCTGAACTTGAAATC
TCACAATTGAAATCTGAACATTGTATGGTCGAGAGTCAGCGGAGGTATTT
TTTATTGTCTAATATTTGTCATACATGTCATACACATATTAGCCTATTTC
ATAATATTCGTGTTTTTAGTGCATCTTTTGTTAAGAGTTCTTGAATTTTA
AAAGTCAGTTGGATGATGACCAAAAACTTTTTTTTCAGCATCTTTCAGTG
AAATCTGGACATTTTTGTGCATTTTCTTTACCCTGTTAACCCTTTAAGTG
CCGATGTCGTATATATACGACATGGGCTATATAGGAGGGCGAAGCCCTCC
TGTAATGCCCAGTTTGAGTTAGAAATCGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCTTTCTAGATCAGGAGATATAAGCCCTTAAAGT
TTGAACTAGCGATTTTTAAAAAAAAACTTAGAAAAAAAGACCCTGGCACT
CAAAGGGTTAATTGAAAAGAAAATTTCATGTAATAAATGCACGAGTCCTA
TGAAATAGGGTTAATTCAGTTAGATCCATTCATAATTCCTTTAGCGGTAT
CTATAAATCTAAGATACCCCTAAATAAATCGAATCTTTCATAATCTTTGG
ATTGAAAATCTTGATATTTGAAAATTTTGGCTTGATTTCAAGATTGTAAA
TTCTTCCAAGTCTTCAACACCAATAACTTGTACTTTCAGAACGTTAGCGC
GCAACTTAGATGCTGCCGACCAAGAACGAGCCTTGTTGAAAAATGAACTC
CAAGGTCTGGCACGTGCTTTGTCTCCTCTAAAGAAAGAAGTCTGCCAAGT
GGTCAAAAAACAACACAGTCTCCTTGACAACAATAACAATAAAGATAACG
TCACTGATGATCGTGGTTGCCAAGACAACAACGATGAAGCCGTGACCGAG
GATAATGATGATGTCATTCCAAAAGAAAATGAAGCTGGTCTTGATTTACC
GGATGAGGTAAGAAAATTAAATTTTTTCAATCCATCATGCACTTTGAGAT
TATCGCATTATTTTTTTTCAAGTTGAAGGATTCGAATTGAAGGATCTCCT
GTCAAGAACATGGTCAAAAATACCCCCTGTTTTTGTGACATTTTGTATAT
GATATCTTTAACCAAAGGATTTTAGGTGATATAATGTGGCTGACACTAAG
TTTATATATTCCTCAAAAGGGGAAAAGATCGAATTTCAAAGTGCAGAAAA
AACGGTTACAATATCTCTTCTAGATATCCCTAAATTTAACTCTAAATCAG
GTGATTTTTTGTGGCTTACATTGTCATGTGGCTTACGTTAGTCACAATTT
TTAGAGAACAATTGTGGGTTACCAGGTATGTGTAAAAAAAACAGCGAAAA
TTTCAATGAAACGATAGAGAATTAAAATTTTTATAAATGGGTGATGGATT
GTGGTTAAAACTGGACGTGAAAACACGTGGTTGACATTTCCAAGTAGTCA
ACTGTAAATGTTTGTAAGCCACAAACCATCACCTAACAGAACTTTTCAAA
CTACTACAAGCCTAGGTGAAGCTTTGAACTTGAAGTGTGTAAATTTTCAG
CTGTCAAAACAAATGTCAGCCACATTTATCACCTGAAGTGTAAAAAAATT
GAAAAATTGTCAATTTTCAAATGTCACACTATTTTTGACCATGATCTCAA
AGACTCCTGGTTAGCCTAATAAAACTCTCTTCTACACACCACCAACATAC
CAGAAAGTTAGTTCTAGCCAGACACAATTTTCACCTAACCGTAACATTCG
GGCGTTCGGGATGGGTCCTAGCTGGCACACAACGTTGTTTCAACGTTTAT
CTAATGTTCGTAACGTCCATATAACGTTAGACGAACGTTGAAACAACGTT
GTGTGCCAGCTGGTGTACTACAGGCTAATATTTGGTTTAATTTTCTCACA
AATAAATATAATTTGGCATCTTTTTAAGGTCAATCGAATGAAAGAGGATT
TGACGTCATTCAACGAAGAAAAATCAGCCTTGGAAATAGAACAAGGCCGT
TTGGAAACGAGGCTGAAAGAGATTGGGGACGAAAAAGATGATTTGAGATC
CAAACTAAGGGATTTGATACAAGTAAAACATTTTCGTACATTGTATCTTT
GAATCTTGTTTGACGAGTTCCTATTTCTTTTTTGTCATTTCATTTTTAGA
TTCTAGCCAAACTTTGTTGGTATGCAGGGTCATGATTGTCTTTCTTAGTG
TTTTACTTTCTTTCATTTGAGGATTTAGTGAAAATAAGTATACCGCTGTA
ATCGTAAACGCAAACGCAAAATACAACAGGCTAGGTCTAACCAATCATGT
TTCGTATTTCCACTAGCCTGTTACATTTTCCGTTCGCGTTATTCTACCGA
TAGTTAGCTTTGCTGTTGCATTTAAGATGTTTCATGGATTTTCTACCACG
TGTGCGAATTTACGTCTGAAAGAATTTTTCCAACTTTACTTTTCTTTCTC
TAAAGGATTTGGACGAGAGCAATAAATTAGCATCTAAAGAAAATTTGTCA
GAAATGGAGGACTCCATTCGCATGATCAGCTCTTTAATGAGTGACAGCGA
AACATTGGATCACGAAAAGGTAATATTATCTGATGACGTCACAGACGCTC
ACTATGACAACAAGATACTAACCATACGCGTTGATAACCTTAATACAGAG
CTTCGTTCAGTGCAAGAAGATCTCAGTTTGGCGACGGTCGATCGATTGAA
GTTGAAGGATCAATGGAGGCAAGTAAAAAAGCATGCATCACACTTCTACA
CCAACACCGAGCATAATAAAGGTCTTAAATCTTTGCACCGTGAGCTTGAT
AACCTAAAAACAGATCTCTCTTCATTCGAACATGAACAAAAAGACCTGGT
GTCAGAGCTTGCAAATTTGAATCAACAGCTAGTCATGGCTGAAAATAACA
TGGCGAATGTCAGCCATTTTAAACATGTCATTGAGAGACACTTACGACTT
TATAAAGATCGTAACTCACGTCTTGAATCGCATTTGCGAGTCATTCATAA
CGATCTTATCGAAATGGAAGCACATAGACCAAAAGCACCGCGAAAGAGTG
CAAAAGTCCTTTTAGAAACCATCAACCTGCACCATTATTTCTCCTCCTTA
GAGGATGATTTGAAAAATACGGAAGCTCAGAATAAGAGTCTGGTAGAAGA
CCAACAAGATTTGAAGGAGCGTTGTAATGCACTTGAACAAGAGAAACAAG
TCACTACTGTTAGCTCTGAATTCATACAAGATAGCATGGTAGGTCAACAC
ACTTTTATCGCTCAATTACAAAAAGACAAACAAACACTTGCTTATGAAAA
AGAGAGACTACAAACTAAACTATCGTTATTCAAAGATGATAAAAAACGAA
TGCTAGAGGATATGCAACGGTTAAGTCGTAGCCTGGGTGCCACTACTCGA
TATAATCGTGAACTCGAGGCTAAGTTACAATCATTCAAAGTTGATTTATC
AGATTTTGAAAATCGAGCCCATGCCCACTCAGATAGCCGTAACGGTTTTG
ATAGTATTGATGGAGTTGCGGCTAAATCAACCGACTACTTATGCACAATG
TGTCGTGAAAAGGTTGAACGCAAGTTCCTAGGTATCTCCAAGAACACTCA
ATTACTTGGCGATGAACTTCTAGATTGCATTACTGACAATTTGTCGCTTG
AAACTGCAATCTTTACATTCCTTGAAGAGAAAACTTACTTGGAGCATGAG
AAATACCATCTTGAATCCGATATCAATCACAAGTATCCTAGCAACAACGA
TCATAGAGATTACGTCATTTTACAACAAAACAGACGTTCTAGAACTTATT
CCTCGCTTTCTAACCACAGCGAGATTTCTAACATGACAGCCACTACTAAC
CAACAACTGACCCCTAGACAATGGTCTGGATCACAACTCTCTATCGATAG
CGATATCTCAACCGTTAAAAGGTGAGAGCAAACGCCATTTAACTAACGCC
CTAAAAATCCACCCTACCTTGGATGCGTTTTATGATAAAGGGAAAGAAAA
TTTCGCATTGCAGACTCATAAACACTGCACAATTTGGTGCATGTTTTGCT
AAAACAACTGAAAACTTCCGAAAAGCACCAACCAACAATCCGCCCATGCA
TGAACATATCCTCCACCCTTCACCGCCCACAGATCCAGACCACACTGTCT
TTAACATTGCATGCTGCACTAACCACTACAACTAATCTTTATACCTAACC
ACCTAGTTATTTAATTACCTATCTAACCCGTGTACTCTTGTGCTTGATTT
TATCTTTTACTATTGAATACCTATCCTGCCTGTTTGAAACCAACCCTCCA
CCCTTTTGTTTGTGGCTTGTACCTTACCTTACCCTCCAATGTTTGAATAT
CGAACTAAATGATCAAATACTCCTTGAAAGTGTATTTCCATCAATTTTTG
TACCCTCCCTAGAAATGATTTTTAAACTAATTTCTTCTGACCGAAGCACA
AAAGTATTACACTATCCTCCCTCCCTCCTATGAACCGTCCGCCATCCTAA
CCATACCCCTCCTATAAACCGTCCGCCATCCTAACCATACCCCTCCTCTT
CTCTCTCCTTCCTGTAGGATGACTCCACCCATCTTTGAACCAATCCCAAG
ACACCGTGCAATGACCACGCCCTTACGACGTACGTCTGACAGTGACGATG
AAATTGTCCGTCCAAAACCACGGCCAAACAGTTGTGTCGGGATTTACACC
ATCAATTTTCCAACTTCCACATTGGTTCGTTCTAACACGACAACNGGAAA
GAAAATTTCGCATTGCAGACTCATAAACACTGCACAATTTGGTGCATGTT
TTGCTAAAACAACTGAAAACTTCCGAAAAGCACCAACCAACAATCCGCCC
ATGCATGAACATATCCTCCACCCTTCACCGCCCACAGATCCAGACCACAC
TGTCTTTAACATTGCATGCTGCACTAACCACTACAACTAATCTTTATACC
TAACCACCTAGTTATTTAATTACCTATCTAACCCGTGTACTCTTGTGCTT
GATTTTATCTTTTACTATTGAATACCTATCCTGCCTGTTTGAAACCAACC
CTCCACCCTTTTGTTTGTGGCTTGTACCTTACCTTACCCTCCAATGTTTG
AATATCGAACTAAATGATCAAATACTCCTTGAAAGTGTATTTCCATCAAT
TTTTGTACCCTCCCTAGAAATGATTTTTAAACTAATTTCTTCTGACCGAA
GCACAAAAGTATTACACTATCCTCCCTCCCTCCTATGAACCGTCCGCCAT
CCTAACCATACCCCTCCTATAAACCGTCCGCCATCCTAACCATACCCCTC
CTCTTCTCTCTCCTTCCTGTAGGATGACTCCACCCATCTTTGAACCAATC
CCAAGACACCGTGCAATGACCACGCCCTTACGACGTACGTCTGACAGTGA
CGATGAAATTGTCCGTCCAAAACCACGGCCAAACAGTTGTGTCGGGATTT
ACACCATCAATTTTCCAACTTCCACATTGGTTCGTTCTAACACGACAACA
TCCGTTACCACTCCCCAAGTGGCACGTCTAATGGCAATGTCTTCAAGCAG
CAGTCGTTTAAGTCGGAAATACCGCATTGCTGAGCAAGAACGTTCCGCTG
TTAAGCGTACCCGGCGTCCATTGGCTTTACGGATGCGAAGATACCGTGAT
TTGCTTGTCTTTGGGAATTGCGCCGGAAAGACTCGAAAATGACTAATGGT
GATTTTCATTATTTCATTTGTTTTTTTAATATTTTTATTTAGCTGTTTTT
TCGTTAATTTTTATGACATTTCTCCCTACTTCTAGGGAGTCTTTGAATTT
AGGTTTGATAATAACAGACCTCTATGAGATTACTTTTCATCCTCATAGAT
TTAAATCTAACTTATGAATTATATTAAGATTTGTTTTGAAATAGTTTATG
TTGGTTCCGTTTGCATTCATCGAGTTTTATCATTTCTCGTGTTTTCTCCC
TTTTCTAAATGATTCTGTCTCACTCAATAGACTTGGTTGAAAACCAACGT
CGGCTTTTTTTAATAATCAAGATATAATTCCAAATTATCCTACTGATATT
TCTTTGTTGATATTTTCTGTACATTATCATTTCTTGTGTTTGTTAAGTCA
AATCCGCCGCTCACCATTATTTTTCTTTTGGATTTACTTTTCACTTGGGT
CCTGCTGTGCGGGAACCGTTTCTTAATCAATTTATGCCATATCCAACATT
TGGCTTTCAAATATTGGTTTTCTGGATTGGCTATTCCAAATTGGCGTCAT
ACTTTCACATTCTTTATAGAAACTTTGATAACATCACCTTCTTTGTTCGA
CTTTTCCGACACAAGAAATTTAAGCACTCTTCGAGTATAATATTGTAAAA
TATTTTTTAAACCATAAAATTTAAACAAGTCATCAATAATTTTAATACCG
TCAATATTTTATCTTACAATTTATTTCTCATTTTATATAAATTCTGTCAT
GTAGTGTACATTAAAGTGTTCAAAGTTTTTTTTTTTCGATGTAAAGTTTT
TTGCTAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007196XLOC_007196Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012818-exon-sc0000156-1575043694:258203..258489TCONS_00012818-exon-sc0000156-1575043694:258203..258489Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:256260..257644TCONS_00012818-exon-sc0000156-1575043694:256260..257644Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:255872..256033TCONS_00012818-exon-sc0000156-1575043694:255872..256033Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:255108..255282TCONS_00012818-exon-sc0000156-1575043694:255108..255282Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:254741..254889TCONS_00012818-exon-sc0000156-1575043694:254741..254889Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:254122..254396TCONS_00012818-exon-sc0000156-1575043694:254122..254396Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:252896..253135TCONS_00012818-exon-sc0000156-1575043694:252896..253135Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:251383..251650TCONS_00012818-exon-sc0000156-1575043694:251383..251650Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:250268..250411TCONS_00012818-exon-sc0000156-1575043694:250268..250411Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:249622..249884TCONS_00012818-exon-sc0000156-1575043694:249622..249884Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1575043694:245832..247017TCONS_00012818-exon-sc0000156-1575043694:245832..247017Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:258203..258489TCONS_00012818-exon-sc0000156-1510915933:258203..258489Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:256260..257644TCONS_00012818-exon-sc0000156-1510915933:256260..257644Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:255872..256033TCONS_00012818-exon-sc0000156-1510915933:255872..256033Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:255108..255282TCONS_00012818-exon-sc0000156-1510915933:255108..255282Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:254741..254889TCONS_00012818-exon-sc0000156-1510915933:254741..254889Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:254122..254396TCONS_00012818-exon-sc0000156-1510915933:254122..254396Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:252896..253135TCONS_00012818-exon-sc0000156-1510915933:252896..253135Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:251383..251650TCONS_00012818-exon-sc0000156-1510915933:251383..251650Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:250268..250411TCONS_00012818-exon-sc0000156-1510915933:250268..250411Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:249622..249884TCONS_00012818-exon-sc0000156-1510915933:249622..249884Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1510915933:245832..247017TCONS_00012818-exon-sc0000156-1510915933:245832..247017Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:258203..258489TCONS_00012818-exon-sc0000156-1491911889:258203..258489Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:256260..257644TCONS_00012818-exon-sc0000156-1491911889:256260..257644Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:255872..256033TCONS_00012818-exon-sc0000156-1491911889:255872..256033Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:255108..255282TCONS_00012818-exon-sc0000156-1491911889:255108..255282Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:254741..254889TCONS_00012818-exon-sc0000156-1491911889:254741..254889Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:254122..254396TCONS_00012818-exon-sc0000156-1491911889:254122..254396Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:252896..253135TCONS_00012818-exon-sc0000156-1491911889:252896..253135Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:251383..251650TCONS_00012818-exon-sc0000156-1491911889:251383..251650Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:250268..250411TCONS_00012818-exon-sc0000156-1491911889:250268..250411Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:249622..249884TCONS_00012818-exon-sc0000156-1491911889:249622..249884Clytia hemisphaericaexon
TCONS_00012818-exon-sc0000156-1491911889:245832..247017TCONS_00012818-exon-sc0000156-1491911889:245832..247017Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000156supercontigsc0000156:245832..258489 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.4198e-08	0.0263348	0	0	5.17633e-07	1.56768e-08	0	1.42749e-10	1.04776e-07	0.00539616	3.5486e-05	0	0.187183	0.095755	0.713717	0.000919909	0.00755752	0.0062948	4.25712	6.28361e-07	2.12742	2.01612	2.07425	0.0344336	0.38363	0.0161222	0.0078653	0.642021	2.48441e-05	0.000125381
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012818 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top