|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012852 ID=TCONS_00012852|Name=TCONS_00012852|organism=Clytia hemisphaerica|type=transcript|length=1262bp
TCCAGCAATTTGGGCCGGGAATTATCTGCTCTGTATTACGAAAATAAAAC
CCTATTTCAACCCTAATACTTTATAGCATGTGGCGCAGGAAAATTTGCAG
CGTTATTGTGTGCTAATTTTGGAGAATGTTAGCGTgccaaattgaaaaaa
acttatttATAAGTAATTTCTCATTTCCAACTGGTTTTACTTGCATCCAA
TGAAGTATAGAGTAATTATTTATGCAATAGACTGTCATGTTGGCCTAAAA
GAGTAAATATTTGATTGCCTATTGATTATCAGAATCAATCGATATCCAAT
TGGTTGGAAAGTTATTCATTGGGGTGGGGGAGTCAGGTATGCGATTTCTC
ACAAGCGATTTTAAAAGTATATACTTGAAAATTGGACTGGTCTTGGAATG
GTATTCAAACAGTCTAGTAGGGGTTAAATCTTTGCTTTAGATCGGCCTTC
AGACCTTAGAGAATCCAACTTTGAACGGTAGGTCATACGAGGTCACTTTT
CATTAATCCCTTTGAGAGTTTTGCCCTGCATTCTTTGTTTATGAGTCAAG
TAAATAATAAAATGCTTTCACAACATTtatctttgatacacatttcaGGA
GGACACTGGTGTGACTAAAAATGCCTTTTGAGTGATTGATATGATGTGTG
CCTGATCTCACTGtatctgatttctttttgtggGGTTACATGAAGCAACA
GATCTGGTAGCGACCCCAAAATTTGCAATCACAGACTCTTGATCAATTGA
AAGCTTCAATCAGAAATGTTGCAGTTAAATCTTGACCCTCAAATGATTCG
AAACAAATGGGTAATCGTGTAAATAGGTGCTTTGGAAAATGAATATACAT
ATTTCTTGATGGATAAAAAACCTTTGTGTCTTTGTCTTACAATCAATTTA
ATACCCatactttttgccttttttcaacttttttgaaaagtaatggtTTA
GCATGTagaccataacttttgattcagttgaccaaatttgacaaatgacc
cctcataatttaagtttatcctttcTCTTCCTAATGCACACTGATTGATT
CTTTAGCAGTTGATAGAACCTGAGaaaattcaaatctgcaaaattaagtc
ccaatggaaatttggaagggcctcttccgcgaaatatttccaaacaaaac
tcaaaatatgtcagataaatactatttgaatggttacttgcatcaaagaa
gcgctaataatgtgtatttcaacaaccaacatgcatgatttggcagtaaa
agccacaaaatc Run BLAST on NCBI transcript from alignment at sc0000156:36703..37964 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012852 ID=TCONS_00012852|Name=TCONS_00012852|organism=Clytia hemisphaerica|type=transcript|length=1262bp|location=Sequence derived from alignment at sc0000156:36703..37964 (Clytia hemisphaerica)
gattttgtggcttttactgccaaatcatgcatgttggttgttgaaataca
cattattagcgcttctttgatgcaagtaaccattcaaatagtatttatct
gacatattttgagttttgtttggaaatatttcgcggaagaggcccttcca
aatttccattgggacttaattttgcagatttgaattttCTCAGGTTCTAT
CAACTGCTAAAGAATCAATCAGTGTGCATTAGGAAGAgaaaggataaact
taaattatgaggggtcatttgtcaaatttggtcaactgaatcaaaagtta
tggtctACATGCTAAaccattacttttcaaaaaagttgaaaaaaggcaaa
aagtatGGGTATTAAATTGATTGTAAGACAAAGACACAAAGGTTTTTTAT
CCATCAAGAAATATGTATATTCATTTTCCAAAGCACCTATTTACACGATT
ACCCATTTGTTTCGAATCATTTGAGGGTCAAGATTTAACTGCAACATTTC
TGATTGAAGCTTTCAATTGATCAAGAGTCTGTGATTGCAAATTTTGGGGT
CGCTACCAGATCTGTTGCTTCATGTAACCccacaaaaagaaatcagataC
AGTGAGATCAGGCACACATCATATCAATCACTCAAAAGGCATTTTTAGTC
ACACCAGTGTCCTCCtgaaatgtgtatcaaagataAATGTTGTGAAAGCA
TTTTATTATTTACTTGACTCATAAACAAAGAATGCAGGGCAAAACTCTCA
AAGGGATTAATGAAAAGTGACCTCGTATGACCTACCGTTCAAAGTTGGAT
TCTCTAAGGTCTGAAGGCCGATCTAAAGCAAAGATTTAACCCCTACTAGA
CTGTTTGAATACCATTCCAAGACCAGTCCAATTTTCAAGTATATACTTTT
AAAATCGCTTGTGAGAAATCGCATACCTGACTCCCCCACCCCAATGAATA
ACTTTCCAACCAATTGGATATCGATTGATTCTGATAATCAATAGGCAATC
AAATATTTACTCTTTTAGGCCAACATGACAGTCTATTGCATAAATAATTA
CTCTATACTTCATTGGATGCAAGTAAAACCAGTTGGAAATGAGAAATTAC
TTATaaataagtttttttcaatttggcACGCTAACATTCTCCAAAATTAG
CACACAATAACGCTGCAAATTTTCCTGCGCCACATGCTATAAAGTATTAG
GGTTGAAATAGGGTTTTATTTTCGTAATACAGAGCAGATAATTCCCGGCC
CAAATTGCTGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012852-exon-sc0000156-1491911889:36703..37964 | TCONS_00012852-exon-sc0000156-1491911889:36703..37964 | Clytia hemisphaerica | exon |
| TCONS_00012852-exon-sc0000156-1510915933:36703..37964 | TCONS_00012852-exon-sc0000156-1510915933:36703..37964 | Clytia hemisphaerica | exon |
| TCONS_00012852-exon-sc0000156-1575043694:36703..37964 | TCONS_00012852-exon-sc0000156-1575043694:36703..37964 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000156 | supercontig | sc0000156:36703..37964 . |
Blast
The following BLAST results are available for this feature:
|
