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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012855 ID=TCONS_00012855|Name=TCONS_00012855|organism=Clytia hemisphaerica|type=transcript|length=1273bp
caaattcgcgaaatataatccccgcgaaaatttacaCCCTTAAGGTATTA
TTTTTATCCCATAGGAAAAACATTAATAATACAGTTCGATTGCTAAACAA
ACCCACATCATCATAATGTGGGATAATCTGGACAATAAATGTGGCGGAAC
TTCCGGTGTTCAGATAGCGTCATACTTCGGTTTCGGTCTTTCCGTAATCC
TCTTCCTGGTGACGACTCCATTGACAGTCGGTATTATTTACGGATTGTCA
AAAAGCAAAGTGTTGTTGACACGAAATTATTATCTGGTCATCCTAAATAT
CACAATCGCTGACATGTTAACTGCTATTCTTACGGATCCAATGTCTATCA
GTTTTCATATTAAGGAAGCACTGGGCCCGAGTGTAGCTACTATAGCAACC
GAAGAACAATCAGCAATGCATTTTATGTTCTTTTTTGCGAACATTGTTGC
TGTTTTATCAATGGCGTTTTTAGCTTTGGATCGTCTTGGTGTTATCTTGA
CGCCATTTTTTTACTATCGAACTTTAACAAAATTTCGAATGAAAATCGTT
TTGGTTTGTACTTGGATCGCTTCACTTGGTATAAGTatcgtttatttttt
catcgGCTATATTCGTTTTCTAGTCGTGTTTTCATTCTCGACAGTAGCTC
TAACTCTTATCTTCATGTTAATCACGATGCTTTTATTACGACGCCGATTG
AAAATCGCAAAAGCGTACGACACTCAAAGGCGAGACAGTCGCACCAATGT
ACTtcataaaaacaacaatttaaATGACACTCTCCCTGGAGACACCTTAG
GGACGTTCCGACGTCGCAGGGACACGGCGATTGAGTTTACGCAAGCTGAT
CAGAAGATTACAAAAACTTTCCTATGGATGTTAGTGTTGTTTATCATGAA
CTACGTGCCTTGTATTGTTTTGGTCATCTACATGAACATCTGCGTAGAAT
GTAACTGTGATTTCGTTCATATTATGCGGGACATTATCTGGTTTTTCATA
CTGGCAAGTCCCTTTTGTCGTGCATTGAACTTTCTGATGCGATTGAAGAC
TTTGAGAGAACAAGTACAGAGAGTCTGTTTTCCACCAGTAGATGGGAGTG
AATCAATGAGTAGTCTACCTTTGAACAATATTTTGAACTAACAAATGTTC
ATCTAGGACTTTTTACTATATAGGTATAACAATTCATAGAGGATCTTAAT
AGTGAATAGTAATCTTAGATTACAAATATACATTTACCAAGTACAATCAC
TTTGCAAACCTTTTGTCCGAACG Run BLAST on NCBI protein sequence of TCONS_00012855-protein >TCONS_00012855-protein ID=TCONS_00012855-protein|Name=TCONS_00012855-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
MWDNLDNKCGGTSGVQIASYFGFGLSVILFLVTTPLTVGIIYGLSKSKVL
LTRNYYLVILNITIADMLTAILTDPMSISFHIKEALGPSVATIATEEQSA
MHFMFFFANIVAVLSMAFLALDRLGVILTPFFYYRTLTKFRMKIVLVCTW
IASLGISIVYFFIGYIRFLVVFSFSTVALTLIFMLITMLLLRRRLKIAKA
YDTQRRDSRTNVLHKNNNLNDTLPGDTLGTFRRRRDTAIEFTQADQKITK
TFLWMLVLFIMNYVPCIVLVIYMNICVECNCDFVHIMRDIIWFFILASPF
CRALNFLMRLKTLREQVQRVCFPPVDGSESMSSLPLNNILN Run BLAST on NCBI transcript from alignment at sc0000156:215133..216405 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012855 ID=TCONS_00012855|Name=TCONS_00012855|organism=Clytia hemisphaerica|type=transcript|length=1273bp|location=Sequence derived from alignment at sc0000156:215133..216405 (Clytia hemisphaerica)
CGTTCGGACAAAAGGTTTGCAAAGTGATTGTACTTGGTAAATGTATATTT
GTAATCTAAGATTACTATTCACTATTAAGATCCTCTATGAATTGTTATAC
CTATATAGTAAAAAGTCCTAGATGAACATTTGTTAGTTCAAAATATTGTT
CAAAGGTAGACTACTCATTGATTCACTCCCATCTACTGGTGGAAAACAGA
CTCTCTGTACTTGTTCTCTCAAAGTCTTCAATCGCATCAGAAAGTTCAAT
GCACGACAAAAGGGACTTGCCAGTATGAAAAACCAGATAATGTCCCGCAT
AATATGAACGAAATCACAGTTACATTCTACGCAGATGTTCATGTAGATGA
CCAAAACAATACAAGGCACGTAGTTCATGATAAACAACACTAACATCCAT
AGGAAAGTTTTTGTAATCTTCTGATCAGCTTGCGTAAACTCAATCGCCGT
GTCCCTGCGACGTCGGAACGTCCCTAAGGTGTCTCCAGGGAGAGTGTCAT
ttaaattgttgtttttatgaAGTACATTGGTGCGACTGTCTCGCCTTTGA
GTGTCGTACGCTTTTGCGATTTTCAATCGGCGTCGTAATAAAAGCATCGT
GATTAACATGAAGATAAGAGTTAGAGCTACTGTCGAGAATGAAAACACGA
CTAGAAAACGAATATAGCcgatgaaaaaataaacgatACTTATACCAAGT
GAAGCGATCCAAGTACAAACCAAAACGATTTTCATTCGAAATTTTGTTAA
AGTTCGATAGTAAAAAAATGGCGTCAAGATAACACCAAGACGATCCAAAG
CTAAAAACGCCATTGATAAAACAGCAACAATGTTCGCAAAAAAGAACATA
AAATGCATTGCTGATTGTTCTTCGGTTGCTATAGTAGCTACACTCGGGCC
CAGTGCTTCCTTAATATGAAAACTGATAGACATTGGATCCGTAAGAATAG
CAGTTAACATGTCAGCGATTGTGATATTTAGGATGACCAGATAATAATTT
CGTGTCAACAACACTTTGCTTTTTGACAATCCGTAAATAATACCGACTGT
CAATGGAGTCGTCACCAGGAAGAGGATTACGGAAAGACCGAAACCGAAGT
ATGACGCTATCTGAACACCGGAAGTTCCGCCACATTTATTGTCCAGATTA
TCCCACATTATGATGATGTGGGTTTGTTTAGCAATCGAACTGTATTATTA
ATGTTTTTCCTATGGGATAAAAATAATACCTTAAGGGtgtaaattttcgc
ggggattatatttcgcgaatttg Coding sequence (CDS) from alignment at sc0000156:215133..216405 >TCONS_00012855 ID=TCONS_00012855|Name=TCONS_00012855|organism=Clytia hemisphaerica|type=CDS|length=1026bp|location=Sequence derived from alignment at sc0000156:215133..216405 (Clytia hemisphaerica)
TTAGTTCAAAATATTGTTCAAAGGTAGACTACTCATTGATTCACTCCCAT
CTACTGGTGGAAAACAGACTCTCTGTACTTGTTCTCTCAAAGTCTTCAAT
CGCATCAGAAAGTTCAATGCACGACAAAAGGGACTTGCCAGTATGAAAAA
CCAGATAATGTCCCGCATAATATGAACGAAATCACAGTTACATTCTACGC
AGATGTTCATGTAGATGACCAAAACAATACAAGGCACGTAGTTCATGATA
AACAACACTAACATCCATAGGAAAGTTTTTGTAATCTTCTGATCAGCTTG
CGTAAACTCAATCGCCGTGTCCCTGCGACGTCGGAACGTCCCTAAGGTGT
CTCCAGGGAGAGTGTCATttaaattgttgtttttatgaAGTACATTGGTG
CGACTGTCTCGCCTTTGAGTGTCGTACGCTTTTGCGATTTTCAATCGGCG
TCGTAATAAAAGCATCGTGATTAACATGAAGATAAGAGTTAGAGCTACTG
TCGAGAATGAAAACACGACTAGAAAACGAATATAGCcgatgaaaaaataa
acgatACTTATACCAAGTGAAGCGATCCAAGTACAAACCAAAACGATTTT
CATTCGAAATTTTGTTAAAGTTCGATAGTAAAAAAATGGCGTCAAGATAA
CACCAAGACGATCCAAAGCTAAAAACGCCATTGATAAAACAGCAACAATG
TTCGCAAAAAAGAACATAAAATGCATTGCTGATTGTTCTTCGGTTGCTAT
AGTAGCTACACTCGGGCCCAGTGCTTCCTTAATATGAAAACTGATAGACA
TTGGATCCGTAAGAATAGCAGTTAACATGTCAGCGATTGTGATATTTAGG
ATGACCAGATAATAATTTCGTGTCAACAACACTTTGCTTTTTGACAATCC
GTAAATAATACCGACTGTCAATGGAGTCGTCACCAGGAAGAGGATTACGG
AAAGACCGAAACCGAAGTATGACGCTATCTGAACACCGGAAGTTCCGCCA
CATTTATTGTCCAGATTATCCCACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012855-exon-sc0000156-1491911889:215133..216405 | TCONS_00012855-exon-sc0000156-1491911889:215133..216405 | Clytia hemisphaerica | exon |
| TCONS_00012855-exon-sc0000156-1510915933:215133..216405 | TCONS_00012855-exon-sc0000156-1510915933:215133..216405 | Clytia hemisphaerica | exon |
| TCONS_00012855-exon-sc0000156-1575043694:215133..216405 | TCONS_00012855-exon-sc0000156-1575043694:215133..216405 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000156 | supercontig | sc0000156:215133..216405 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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