|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012902 ID=TCONS_00012902|Name=TCONS_00012902|organism=Clytia hemisphaerica|type=transcript|length=785bp
AACTTATTAAGAAAAGAtgtgaacaaaaaaagaaagttgtataaaaaata
aaagatataCTATGGCAAACATGAAACAGATACAGAATTAATTTCGCAAA
AAGAAACTGACCAAGATTCAACAAGGATTCTGGGAACTCGCCTATGGAAT
CAATCCAATATTACACCACAAAGTGTACCTTGGTGGGCAATTAAGCCCGT
TAATGCTGACAACCTGATCATCATCAATGAAGCAATGAAGTTCTTTCAGA
TTGCCATCTTTGCAACTCTGGTGAATCCAGCTTCGGCTGCACCATCAAAC
AGGTAATTCCCTTGACGGTACATAATCAACAGTGTCCTCGTGTTCCCCAT
CCGTACACACCAACAAACTACTTATCAAATTCTCCAAATCACAAATATCC
TGCCGTGTTTTGTAATAAATATCATCTAAAGCATTGTTCATGATCTGAGC
TTGGTTTTTCAGTAATTTAAATGCTACTATAAGTTCATTTTTACGTATAA
CTTGTGAGTCgtcattttgatgtttttgtatGAAATCTTGTACGTTTTTA
CGACTCCGTGTGACATAACGATCTATTTGCTCCATTTTGAGTCCACCata
attgttatttttgttgttaTGGCTACCGCCATTTAATTGGGGTCGTGTAA
CGTTTGAGAAGTTGATATTTTTCGGGGACGTGTAGTGGCAATTACCATTG
TTTTGAATACGCATATGTGAatctttgatttcatcgtgACTTTTGGTAGT
GATTGATGTCTTCGGTTCCTTCTGGAAAAGATATT Run BLAST on NCBI transcript from alignment at sc0000157:211368..215805- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012902 ID=TCONS_00012902|Name=TCONS_00012902|organism=Clytia hemisphaerica|type=transcript|length=4438bp|location=Sequence derived from alignment at sc0000157:211368..215805- (Clytia hemisphaerica)
AACTTATTAAGAAAAGATGTGAACAAAAAAAGAAAGTTGTATAAAAAATA
AAAGATATACTATGGCAAACATGAAACAGATACAGAATTAATTTCGCAAA
AAGGTATGTGATTTTGCGCTTTTTTAAAACCTAGTTTTAAAATTTAGGTC
CAGACAAGCAAGCTGAAACAATAAAAGATTAGTGTTAAATTACTGGTTAG
GTTTGTCCAAATCTTATTTCTTTTCCAAAAAGAATTGTTTGGCGAACAGC
TCATTCCCTGATGTCTTCACTAATCTATCCAATTGCNCTTATTTCTTTTC
CAAAAAGAATTGTTTGGCGAGCAGCTCATTCCCTGATGTCTTCAGTAATC
TATCCAATTGCCGCTTTAAGAAAGACGGATTGAGTCTAGTGCTACCTTTG
TTTTCATTTGGCATATTTTTCGAAATCCAGCGGTGGATTTTATTTTCAAC
CTGGTGTTTGTGTCAAAACTAAGCTGGGGTCACCCGTTTCAAATGAGAAG
TAAACTTATTTCCCTATGCAAGAGTTTCAACTTTTGCCCCTAGGAGGGTT
TCAACTCAATGAATTTTACGCACTGGTTTCTTTGGTGAATACAAAATTTA
GATTTTTGTGACCTGGGAACGAATCTCTCACCATTGCTACGATCGAGTCC
TGTAATAGTTAAAAATTATTGAGGTTGAGCCCATTGATGGAGGATGTCCG
CCTATTTGTCATTGAGTTGTTTGAGCTCTCAATATCTAACCCGATTTTCG
AGAAAGTTTTTTTACGTATCACCCTTTTAAGTACCTCGCATTGATTTTTT
TTGCTTACACCCCTCTTTAGTATCAAGTAATTTGTTCTTTTGAAGAAAAA
AAGGGGACCCACCCCTTACTCAGGTGCTGGTTATCAAGAGAAAATATGGG
TACATCACCCTGGAATAATGCTTTGTAATACCCAACAGTCAATTTCACCT
CACCGATATGTGGAAGAACTTTAAGTTAAAAACTTTTTTTTAAATATTAG
AAAATCGGATGAAATGAAATCGATTCAAGAAATTTTTCGGAAAATTGGGA
AAATTTTCCTGCTGATTTGCCAAAATCTCACCCATTTCTCTTAGAGGGTA
CATGTATTTTGTGGAGATGTACAGCATAATATCACGAATAAAGAACTGGT
TCGGTAAAATACACAGGAAGAAATCTTTAGCCGACGTTGTAAAAACTCCA
GATCATCATCATCTTTGGCTGATTTGGCCGCCAAATTCCCGCCAAATTAA
ACTTTTTGAAAATATGATCTCTTTTAGGGTGTTTTTGTATTTTTTTTTTG
CTGTTTTTACACCATTTTAAGGATAAATTTTTCAGCAAACGCTAATTTAA
ATTCCCGCCAAATTTAGTTTTTTCGTCCATCCGCCAGATTAAATTCCCTC
TAAAAAACTTTTTCGGCCATCTGCGCCATCCGCCAAATTAAATTCCCCGC
AAAATTTCTTCCTTTAAGGTACTTTATGTTCTTTGATATTTTTAACAAAA
AACTGCGTTTATAAATTGTTTGATAATTTATTCTGTTATTAAGTGTAATT
AAGAATTTAATCACAAAAAAGACGTTAATAAAATGTTTTATTACCCTCTT
TTACAAGAAATGCTAAGTTTCAATGGATAATTAACGTTTTTGTTTCAAAT
TTTCTTTAAATTATCTGCAAAGAATTGATCTATTTGAAATTTTTCTGCAT
CAAAAGTTATGGCTATTTCCTCATTAAAAATAGGGATAAAAAATTGGGCA
AAAAGTAACCATTTTCCAAATTTTTAAACAAGGTTCTCAAAGTTGAAATA
CTCTCCATCACAAAAGTCCCCCCTTTTTTCATCAATTTTTTCATCCTGAC
TTTTGAATTTTCGGATTCAGGAATAATTAACCCAACAGAATATGTATAAA
ATGTTATATTTTTGGTTGGCTACTTTCAGCAGAAATTTATAACTTGTATA
TACATGCCAAATATGAAAAATTCACTATGGTCAGAGCCCTTAATCAGTTG
CCGGGTAAGCGGTACAGCCAACTCTCTCTAATTCGAATCTTTCTATAATT
CATGCTGGAATCATAGAGGTATAAAGAAAGACAGGAGATGAATTTGTCGG
TAATTGGTCGTTAAAGTCTTTTGATTTCTTTTATGTAAAAAATCAAAAGA
AATTCTAGGCTCGCCCGATGAAATACGACTTTTTAGTAGAACTCAAGTTT
GCTCTGAACATTCTTACTATCAGCATGGAAGATTTCTAGCCTTATAATAT
ACGAGAATAAAATAAAATTTGGCTCCACGAAATAGGTTTGCGTTCAATTT
TGTCATCCATTAAATTTTGTTTTGAAAAGATATTTTCTCCAGCCAGAAAA
TAAAAAGTTCTTTTTAAGCACACACAATTTCAGACCCAGTTTGTAGACAA
AAAGTCGCTGGAGAATTTTGGAGAAAAGTATTAAGCAATAGAGTTCACCT
TAAAGAAAATGTTGATCGAAAAATCTTGTCATTTGATGAAAGATTGCAAA
GTTTACAGGCCCTTTTTTAATCCAAATATTTTCACCAATTACACCAATGT
CAGAAACAATGAATCTCGTCTCATCTTATTTCCAACACTTAAGTTAGCCA
ATAAGATTTCACCTATCAACAAAAGAGCTCATTAAAAATGCACGATATAT
GAGATTATGAGCATGCATACCTCGTAACTTTTTTAATCGTAGGGCGAGCA
TGGTTACAGTAGCATACTTCTCCTGTTTCTTTATACCTCCATGCTGGAAT
ATTGGTCCCCTCAGCTAGAAATTAGTATAAAATACTTTCTATAATTCGAA
TCTTCCTCTGGTTCTTTGAAGATCGAATTAGAGAGAGTCAACTATTTGAT
AATGGTAATGCCAATGAGTACTAAATAATTATTTATTTTTCAATGTAAAG
CTCATTAAATCAATTTGTCATATTATGTACAAAAAATAGTCTTTTTCTGA
GAATGATAAAATTAGCACAAACACATACCTTATTGGAACTAATTTTCGCG
AAATACAATTTTTTGCAATTTCATCGACAAATTTGAAAAATCTCTAGGAA
AATGAAAGAAATTTGTCTATAAAATGACATAACCGCGAATATTATTTCCA
ATAAGGTACATTATAATGAATCAAAGGGAATGTTACGGAATAATACTAAA
ATATATAAAATTTGATTTTTTTAAATAATGCGTAAAGCCCTGTTATCAAA
TTTGCAGTTTTTAAGGCATGGTTAATTATTTTCTACTTCGTTAAAAACTC
ATAAAACTAATTTTGAAACCTTTTATTTAGATACCACCCGAAACTTCCTG
TCAATCGAATTAAGATATCCTGCAATTGCATTATTATAAACTGCTTTTAT
TTGCATTAGATCGGTAATTGTGGAAGATATCTTAACATATACTGCAAGTG
CAGGTTATGTTCTCGACCGTTAATTTTTCATACAAAATTTGATTCTCAAA
TTTGAATCAAAGTATAATGTACTTTTTATCAAAATGTATTTACAAAAAAA
GTCTAGAAAATCTTTGACTGAAATTATTCACCTTTTTTTGGCCATTGAAA
GGCCCTATTTACGCTATGGAGAAAATTTTCTAATCCAAAAAATCGATTTA
ATTCTCTTTACCTATTGCTCTTCTAATATAGTTCGTAATTTCACCCAAAC
TTTTCATAATTTTGACCGGTTGCGAGTCATATTTTGCTTCCGTCATATTG
AAATGTATCCATACACAATGTCTCATAATTTATTCAACATTTCCTTTACT
ACTTAGAAACTGACCAAGATTCAACAAGGATTCTGGGAACTCGCCTATGG
AATCAATCCAATATTACACCACAAAGTGTACCTTGGTGGGCAATTAAGCC
CGTTAATGCTGACAACCTGATCATCATCAATGAAGCAATGAAGTTCTTTC
AGATTGCCATCTTTGCAACTCTGGTGAATCCAGCTTCGGCTGCACCATCA
AACAGGTAATTCCCTTGACGGTACATAATCAACAGTGTCCTCGTGTTCCC
CATCCGTACACACCAACAAACTACTTATCAAATTCTCCAAATCACAAATA
TCCTGCCGTGTTTTGTAATAAATATCATCTAAAGCATTGTTCATGATCTG
AGCTTGGTTTTTCAGTAATTTAAATGCTACTATAAGTTCATTTTTACGTA
TAACTTGTGAGTCGTCATTTTGATGTTTTTGTATGAAATCTTGTACGTTT
TTACGACTCCGTGTGACATAACGATCTATTTGCTCCATTTTGAGTCCACC
ATAATTGTTATTTTTGTTGTTATGGCTACCGCCATTTAATTGGGGTCGTG
TAACGTTTGAGAAGTTGATATTTTTCGGGGACGTGTAGTGGCAATTACCA
TTGTTTTGAATACGCATATGTGAATCTTTGATTTCATCGTGACTTTTGGT
AGTGATTGATGTCTTCGGTTCCTTCTGGAAAAGATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012902-exon-sc0000157-1575043694:215703..215805 | TCONS_00012902-exon-sc0000157-1575043694:215703..215805 | Clytia hemisphaerica | exon |
| TCONS_00012902-exon-sc0000157-1575043694:211368..212049 | TCONS_00012902-exon-sc0000157-1575043694:211368..212049 | Clytia hemisphaerica | exon |
| TCONS_00012902-exon-sc0000157-1510915933:215703..215805 | TCONS_00012902-exon-sc0000157-1510915933:215703..215805 | Clytia hemisphaerica | exon |
| TCONS_00012902-exon-sc0000157-1510915933:211368..212049 | TCONS_00012902-exon-sc0000157-1510915933:211368..212049 | Clytia hemisphaerica | exon |
| TCONS_00012902-exon-sc0000157-1491911889:215703..215805 | TCONS_00012902-exon-sc0000157-1491911889:215703..215805 | Clytia hemisphaerica | exon |
| TCONS_00012902-exon-sc0000157-1491911889:211368..212049 | TCONS_00012902-exon-sc0000157-1491911889:211368..212049 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000157 | supercontig | sc0000157:211368..215805 - |
Blast
The following BLAST results are available for this feature:
|
