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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012904 ID=TCONS_00012904|Name=TCONS_00012904|organism=Clytia hemisphaerica|type=transcript|length=1106bp
ATTCAATAACCATTAAAAAGACGGGTATTGATGAAACTAGTGTTATAAAC
AATGGATTGGATTTTAATGAATATGACAATTTAAGTGGGGACAAAGGTAC
TGAACGAGattcaaagaagaagaaaaagaaaagcaaaaagaatAGAAATA
AAGACAATAATTCAGAGCAACAAACAGAAAAGATTGATACAGAGACAGGA
AATATTAATTCAGAAGAGGGAGATGCAAAGGACTTGTCAACTGATGACCA
AGAGAAATCGCCAAATATTCCAGAAAGTAAAAGTATCAATTCTCCTAAAC
CAAATGATGCCATTTCCAAAAGACTTTCtaaatttcaacaaaagatGAAC
AGAAAGCTGGAAGGTGGTCATTTCCGGTACATCAATGAGAAGTTATACAC
AACAGATAGCCACATGGCTGTAGACATGTTCAAAAGGCAACCATCCCTGT
TTGATGTTTATCACAAAGGATTTGAATCACAAGTCTTACATTGGCCAGAA
AATCCagttgatttaattattgaattCATCAAAGAGCAaTCGGAAGATTC
CATAGTGATTGATTTTGGTTGTGGTAATGCAAAGATTGGTCGGAGTGTCC
CTCAAAAAGTCCATTCCTTTGATCTAGTAGCGGTCAATGATGACGTCACT
GTTGCTGATATGAAAAATGTACCAGTGAAAAGTGGAAGTGTTGACATTGC
AGTTTTCTCGTTGGCACTCATGGGTACTAATGTCAATGATTTTATTGCAG
AGGCTAACCGTGCACTCAAGATAAGtgGTCATTTAAAGATAGCAGAAGTG
AAAAGTCGTTTCAAGGACGTCCAACATTTTATCGATGGTGTAATCTCACA
TGGTTTTGACCTTTTGTCGAAAgatGATACCAATAAGATGTTTATCATGT
TTGATTTTGAGAAGACTTCCAACTATAACAAAAACAGTAAGAACGACAAA
ACAATTGAGCTCAAGCCGTGCATCTACAAACGAAGATGACAACGCTTTCA
TTTCTTTTTGACAAGcACGAAAGATGGAATCATCTCACaagaatgaatat
ttttctgtatttttaatgttttaattttaatcatttttttacaaattgaa
aatata Run BLAST on NCBI transcript from alignment at sc0000157:239066..250592- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012904 ID=TCONS_00012904|Name=TCONS_00012904|organism=Clytia hemisphaerica|type=transcript|length=11527bp|location=Sequence derived from alignment at sc0000157:239066..250592- (Clytia hemisphaerica)
ATTCAATAACCATTAAAAAGACGGGTATTGATGAAACTAGTGTTATAAAC
AATGGATTGGATTTTAATGAATATGACAATTTAAGTGGGGACAAAGGTAC
TGAACGAGATTCAAAGAAGAAGAAAAAGAAAAGCAAAAAGAATAGAAATA
AAGACAATAATTCAGAGCAACAAACAGAAAAGATTGATACAGAGACAGGA
AATATTAATTCAGAAGAGGGAGATGCAAAGGACTTGTCAACTGATGACCA
AGAGAAATCGCCAAATATTCCAGAAAGTAAAAGTATCAATTCTCCTAAAC
CAAATGATGCCATTTCCAAAAGACTTTCTAAATTTCAACAAAAGATGAAC
AGAAAGCTGGAAGGTGGTCATTTCCGGTACATCAATGAGAAGTTATACAC
AACAGATAGCCACATGGCTGTAGACATGTTCAAAAGGCAACCATCCCTGT
TTGATGTTTATCACAAAGGATTTGAATCACAAGTCTTACATTGGCCAGAA
AATCCAGTTGATTTAATTATTGAATTCATCAAAGAGCAGTAAGTAGTATC
TTTATTTTGTTAACTTTTAGTAGATTGAATTGATTGAATGTAAAATGGTT
TGAAAGCTGAAACCCTTCTTTTTTCAACGGGTCGAATTTTTATCCTTGCA
CTTTGCAATAAAAACCTGGTCCATTTGTTGATAAATTGACAAACAGAGAG
ACATCGTATCTAATTTTTCATTGCTCTAAAATTTGAAAAGCATTTGATCC
TTTTAACATTAGTAGACCATGAAATTTTAACTATACTTATCATTGAAATG
ATATTTTTGTTGTTTTTGAAAATGTTTTTGTTTTTTCTTCAAGATCGGAA
GATTCCATAGTGATTGATTTTGGTTGTGGTAATGCAAAGATTGGTCGGAG
TGTCCCTCAAAAAGTCCATTCCTTTGATCTAGTAGCGGTCAATGATGACG
TCACTGTTGCTGATATGAAAAATGTAAGCTTTAGAAGACAGATTTCAGAT
TTCACTTAAGGCTGGTATCCACTTTCGCGCGAAATAGGCGACAGTTTTTT
TCTAAACCTTACGTCATAAAAGAGTTTCGCGCGAGCAAAAAAAAAGTTGA
AGGAAGTTGTACTTTTTTCATCCGTTACCTTCAATTGCTTATTGGCCTTG
AAAGTGAGGTTAGAAAAGGCTCGTTGTCGTTGCCTTTTTTGGATCCAAAA
ACATATTTTAGGACAATTTAGAAACTCAATTCATTGATTGTTCTTCATTT
TGTTCTCTTTAGGCCTTTGAAAAAATAAATGAAAAAATGTAATACTTATA
TTTTAGGTACCAGTGAAAAGTGGAAGTGTTGACATTGCAGTTTTCTCGTT
GGCACTCATGGGTACTAATGTCAATGATTTTATTGCAGAGGCTAACCGTG
CACTCAAGATAAGGTCAGGACTTTTTTATTTTTCCTTTTAAGATTTTATT
TTTTCTATCGTTGATTTGACTGCTCTGAGAAGACACCACAAACTGTATGA
ATCAAAAATTTACTCTTGAATTAGAATCTTTTCTACATTTATGAAGTGTA
TGAACGTGAATCTTTATATTATCATTGACCCGGAAAACTTTTTAAGCTCA
GAGATTCTATTCTTCTCATTTTTCTAATATAAAGAAAGTATCATATCGAG
AAATAAAATTAGGTCCGATTAATAATTTCTTCTTTTTTGAATTTTCAGTG
GTCATTTAAAGATAGCAGAAGTGAAAAGTCGTTTCAAGGACGTCCAACAT
TTTATCGATGGTGTAATCTCACATGGTTTTGACCTTTTGTCGAAAGTAGG
TTTAGTCCAGTTACTGTCACATGCCACATAATCACCCACGAGCATTATAT
AAATCATTCCTTTTCTTTCCCGCCAATTTTAGAGGTACACTCTTGACTAT
TCTTTGATGCTCTAAAGAGATAAGGACATTATCTGGGTGCTGATTGCGAA
AAACATATTCATTTTGGCTAAAAATCAATCTGATAGCCTAATGAGATGAT
ACATACCATCCGAGACTGCCCCATCACATTATTCGCCCCCCTAACAAATC
ACAAAACAATTCTTTATGAATGCAGTTAATTTTCAAACTGCTGAAACGAC
CTTGGTAGTAATTTTAGTAATTTCTCCATACCCAGGCACTGGTTTTTATA
GAAAAATGAAACTGAAAGAAACTTCATTTAAAAATGAAAGACCAGGGATT
TTTCTTTTTTTAGGATGATACCAATAAGATGTTTATCATGTTTGATTTTG
AGAAGACTTCCAACTATAACAAAAACAGTAAGAACGACAAAACAATTGAG
CTCAAGCCGTGCATCTACAAACGAAGATGACAACGCTTTCATTTCTTTTT
GACAAGGTACGTCTTTTCTAGATATTAAATTTTACATCTAACTATAGTAA
AATGATCTGAATTAGAAAATGTTAAACAAATCACAAACAAAATGCTTCAA
TTTAATAATAATCAAATAATTTAAACATGAAATTGAACTTTAAGACTGAT
AAATCTGAGAAAGAAATAGGACATCCACGGAATATTCACATTAAACCTCT
TAATGTCGGGAAAATTTTAAGACTATGCTGAACTTTTCTCGAATTTTTTT
TCAAAATTTCCACATTTCAAAATTTTTGGCGTTTTTGCCGATCTAAGTGA
GGGAAATAAAGCCTTTCGGAGCCAAAATGGGGAAAAACTAAAGTGGGTGC
AACATTTTCCTTTAAAGAAAGGGGGCAGTCCTGAAATATTTTTGGGCTAA
ATATTTTTGTTTTAAATAAGGGGACAGCCCCGAAGGAAACTATTAACTGA
TAAGGACTGTCACTACCATTACATAAAGAATCATTGAAAATGAAAAATTG
TAACCGCTTGCACCATTGCTGTTAGAGATTTCAGTTCCGTTCATTCCTCC
ATACGTGCCATCGGTCAGTATTAATATGCATTCCTCATTACATTCCATCC
GTTGGTTCAATACTATGTTGCGTGTTGTTTTGTTTTCGTATCTGTGGCAA
ACTTCTTCTGCAAAATCCATTTTCATTGTTAAACCTTTTCCAAAAGTAGA
AATATATATTTTTAAGAGAAAAATTGTGCTTTTTAAGTTGGTGTATATTC
TAGTTTTAATTGGGGCTACTTATACTACCAAACCCGAAGAATCAATTTAC
AGACTATAAACACTGACCTTTATATATCCCATGACCAAGCTATATCCGCC
ACATCTTTGATCGGAGTTTCTTTTGGAATTGGTACCCGAGAAGAAGCCAT
TGCAATGTTAAAAATTAACGTTTAACGGCGCTACATCATCAAAAGTATTC
GAGGAAAAGTAGAACTGGCGCTCTGGATGCATTTACACCTCTATTGAGTA
GTGCCGCCATTAGGGTACCAATTTCAAAAAAAACTTCGATCAAAGATTTT
TGGTTGGCCGGGATTGAGTAATATGGTCCAGGGATATATAAAGGTCAGTG
ACTATTATTTTGGAAGATATTTGACCTGAATGGTCCTGTGTTAACAATAA
TATTATCACCATGTTTCATTGCTTGATTGATATGGTTTTCAAACGTCTTT
GGGATTTTCATAACTCACCTGACAGGGTGCAATCGGAACAGTTCTTTTCA
CTCTTCTTTGTTTTGTTCTTTGAAACTGTTAAAAATGAAGAAACGATTGT
GATCATTTTTTTTTTTCATTGAAATTTTCATAGTGTTGTATGTAAAGTGG
ACTCTCGCTATTCTGTTGCCTACAAAATCTTTCTCTTATTTCCAAAACTA
CTTCCAACGCTAACTTCATAATTAATTTGAAAGAAAATATTTCCTTGTTT
GAATTAGTGTGAAGATTTTGTAGAAAGATCACAAATTCATGATATTCACC
ACTGCAATGTCTTCTGACATTACATCACGGAACCAACAGCTCATTGGTCA
TAAGTGACGTAAAATCAGTCAATACGTCACTTTAAACCAATCAGCTATTG
GGTGGAATGGAAGACATTGCAATGGTGCATATCATGAATACCACCATACT
TTGAGACTCGTGCACCTAATAGGTTATACATATTTTCAAGAGGAATATAA
TTCAAACCTTCATAAATATGGCTTAGCACTTGGTTACCACATTCATCTAA
AAATGGAATAAAAATAGAATTTTTTTAGAATTTTTTAGGCGTGGGCGTAC
AAACTTTCGCGAGTAGAAACTTTCCCGATTTTCGCGAATTTTGGCCTTCT
TCGCGTTAGTAAATGTCTTAGCAGGGCAATTCGCGAAAGTTTATGCTCGC
AAAAACTTCTCAAAAAAGTTGAAAATCTATAAAACCTCGAAATCGAAATA
AATATCAAATTTTCGGCATATTATTATCCTTTAATGCCTTTTTAAAGTCG
AAGAGCAACCGTTTTTAGTGAAATAAACCAGCTGCGCTGGAAAGTCAGCC
CAAAATGCTTAGAAGGCTTAGAATGATTAATATAGGAAGTAAAGATAAGA
AATCTGGCTTTGTTAAAATCTGAGCAGCTTGAAAGAACGTATCTATTTGC
TTGAAACGTTCAGAAGAAAACAGAGCAGTGCATAGTGGAATCCGTATCCA
AAGCAGAAGTCGGTAAAAAAGATTTATTCCGTTGTTGTTATACTCTTTCC
ATGAGAATAATAAAAGACCCAGATAGAAGAAATAGTCTACAAGTAGTATA
CTAGCAATTAGCTGTCGCTATGAATGCCCCGCCGATAGCAGATATTAGAT
TAGCTGTCGCTATGAATGCCCCGCCGATAGCAGATATTANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA
TCCGAAATCGGAATTAAAATGAAAGTCTTAACGACGACGACCAGCGGGAA
AAAAATCGTCGAACCGATTTGAAGAGTCACCGGGGCTGACTAATTAAGAA
TAGTTTCCACTTTTAAGGCAATTTTTATTCGAAAATTCTCATTTTAATCA
AACAAATCGCGAAAGATTATCCTCGCAAAAAACATTTGTCCCTCAAATTC
GCGAAAATATATGTCGCAAATTTTTCGACCTCGCTAAAGTTTCTGCTCGC
GAAAGTTTGTACACCTAAAGTATCAATTTTGCTCTACGATACCAAAATTG
TTTCAGACTTTTAATTGACCCTACCCCCCCCCCCCCCCCACCCCCATTCA
GTCTTTTCCAGAGAACGATATTTGCTACCAATAATCAAATCCAATGATTT
TACACTGCAAAACAATGTCATTTACGAACCTGGTGCTTTCAAGGTGATTG
ATTCCTTCAAACCCAACGGGAAAGTGTAAAGATCGAATGAATAACTTTGT
TTTGGTATCACTTGCACTGCATGTTCTATTTGCATATCCTATAAAAGCAA
TAGTATTCGATGGTTGTTTATTTTTTAAGAATTATCCCAAACTGGAAGAA
CCTTTTCGTACCCGGACTTAAAGAGTGCAGTAGGTAGTAGGTTAACCCCC
CTGAATATCTACTCTCTGTTTAAACGTTTAAGCTCTATCCACCCTGCCAT
AAAATACTTTACATAATTACATTTTGGATGAAATTGTAATATGTCATCGA
TTTGCGGCGGTTGTTTGTTGCTACTTCTAATCCAAAACCCCAACAACCTT
TTGATGAAAGAGGATTCCGAATGGTTATTTAGTTAACTGTGACGACTTCA
GGTTTAGCTGTAAACTCTGAGAATGTATATCAATGGTTTCAAAAAATGAT
CTGATTAAAGATTGTACTTGGTTGCAAATTTTCTCCCTCGCTTAATGCCT
TATGGTATTTTTTCAAGTTTTCAATTTTTGTATCTTTGAACCTAGCTAGA
TTGTTTGCATTTATAACGGATTTGATATAACTTGTGGTTTTTTGGAGGTC
TGCGACTCAGACCACTTTGAATTCTTTTAGACTCCTTCGNTGCATCTATA
ACGGATTTTTGGAGGTCTGCGATTCAGACCACTTTAGACCAATAATTCTT
TTAGACTCTTTTGGAGTAAAGTCAGGCGCTTGAGATATTTTGAAAAAGTT
AAGCGAAGTGTTGACTTAGAAATGAAGACTTGAAATACCTTCAGTCAAGC
TAGTGTTGATATTTGCGTCGGCTATGAAGAAGTACGCTTGGTCCACGTGG
CTGTATGCATAGAGAACTTCAAAGTCGGGTGGTTTACAGCTATGAACTGT
ACTGCTGCATTTGTCGGCTATATCACTTATAGCCTGCTCGCTGAGCTTTT
GAGCTATAAGCAGAATGAAAGAGTTAACTTTTTATGTGCTCGGCGTATTG
GGGATTTTATGTTCCATACATTTGAGGACGGTTGGAGTGACTAACGATCT
GGAACAACCCGAAGTTTTGACCCGCAAAGTCGAGGATAGTAAAAGTGCCG
ATTTATCATCGTCCTCAGTCAGTCAGAATCTAGACGGAATCAAAAGCTTA
CTGTCTCCATCGCAGAGCAACACACATACTTAAAATGGCTATTAATAAGT
TTATGTGACTTATCGGATCGATGGTTCAGGTTCAAACTTTAGGTTGAAAA
TATGGATGACTGGATTTAGGAATTATATATACGCTTAATTGAGACGATCT
ATAACTTTAGTTTTAAAGTTTTTTCAATCAAAGCCTTTCATTATAGACCA
ACAGTATCCTTAGATGAATGATGGTAGATAGTCTATCACAGATATCAGAG
ATTCTATCAGTATCCTTAGTCTTTATACACGAAATTTGGGTTTAAGGTAC
ATAAACCTAAACAAACATTCTCTATCTTACTTTGACTTGCGACGTATTCT
CTGATGAAGTTTGATTTACTGCAATCGCGTTCTGTTTCTAAAATGATTGT
GAAATACATAATTATATACCTTATCGGTCCTTTTAACACCGGCCCTTAGG
TCCTTTTAACACCGGCCCTTATTGCGCCAAAGCTCAATTATTTCCATTTT
CCAACCCTTATTACGCCAATGGCGACCAATTAACGCCAATAAGGTTTTTG
AAATCAAATGGTTTGAGCTCCGAAAATTTACTGTTTACCGGTTTACAGCT
ATATACCGGTTGCGCAAATGCATGTTTGCTTCAATTTTCATTTATGTAAG
AAGGAAAATCGAAATTTAAGTTTGATATACAAAACTTGCGGACTGAGAGT
TGGTATAAGATATAAAAAACTCAAGAATTTTGACTGAAAACAATGCAAAA
CTTACCATTTGTTACTGTTCCAGCTGCAAAGAGTATCTGAAAAAGGGATT
CATTTTGCAAGCTGTTAAATGTTTCAACATAACACTACAAAAAAGCGTTT
ATGACCTTGCTTGCAAACAGTCCCTCTTTCAAAATGAGGTAAGCAATCTT
TTTGAGAGAGGTTTTTTTGTCTTGGGTCAATAAAATAAACAGCAAAGCTT
TTCAGACATAACTTTACCTCTATCGAAAACACAATTAAGCAAAACAATTT
TTTCATCGTGTCAAAAAACTGTCCAACTAGTAAAGAATAGAATTTCAAAT
CAGATTTTCAACGCTATAATATAAATTCTACAGTTTTTACTTTTACCAGG
CCTTCTGTCAAATACGCGAAAAATCTGAGATTGAGGCACTAGTGCGATGT
TTAAAGGGTGTCCTCTGCATAACACAAGGGATCATTTAAAGTGTAATCCC
TTCTCTCGTCTATTTTTGGTCTTCACTGTTTACTTTTCGTCACCTCACTC
ATCGAAATGCCAAAAAGATGAAAGAGATTAGTTCCTTGTTTATTTTATGG
TTTCCATGCTTGCAAATCCTCATACTGAGGGCAGATCGCAGTTTGTCCCC
AGTTTGTATACAAACTACCATTGTATTTATGGAGTTTCGTTTATAATCCG
CATTTCAGTATCTCAGTGCTTTAGTCAAAATAGCACGAGATATTTTCAAA
AAATCTCTTAAAATTAGTGGAAATATAGCAATCATAGCCCTTTTATTGAT
ATGTACTAAAATCAGGGGATGCTAACATTTACACATCATTCAAGAAGTTT
AATCTCCGTAAAATTCTATACCCTTCGATCTAGGCCCGAGAGGACCTATA
CTTAAGGAGTAAAAACTTGCGCAAGCATAAACTTTCGCGAATCTTTAGAT
AAAAATGAGAATTTTCGAATAAAAGTTGCCTGAAAAGTGAAAAATATTCC
TTAAATTTGATAAAGACGGTTTCTCTTCGACTTTAAAAAGCCATTAACCC
TTTTGAATAATAATAAGCCAGGGGGGACTAATCATCCCCCTCTGTAAAAT
CTTTAAAAATTGTGGAATCAATATGAAACTTGGTAGGATTATACTGACGT
CAGCACTTTCGTTTTCAAATTTTTGATAATTTTATTCAAAATATGCTATA
TCTTTGAAGTATTATATCTCCTGATGTAGAAGAGATAGTTTGATTCTGTT
TTGATATTCTGGTAGCCAAATGAATTCCCCACTAACGATTTTCAATCAGA
TTTGGAAAATTTTCAAATCTAAAGCCTCTATGGGGCGTCAAAATCTCTAA
AATTAATTTTTCTGATTTTGGCGCGCCATTTTGAAATTATGACGTCATCA
GAATTTTTTTTTTTGGAAATGGTTTGTTTTGTCTATACAAAACTACTGTC
AAAATTTCAAGTTCATAGCATTACTATCATAAAAAGATATCTTAATTTGA
AATTTGCAATAAAATACAGGATTTTGTACTGAAAAATTGGGTCTAGTTTT
AATTTGCTCACGTAAGCATAATTGGATGTTTGACAAAAAATATTTTTGTG
AGAAAATGAGCCAAAATAAAAGTTAAGAATTGTCCTAAAATTATAAGGCT
AAATCACAATCCTTTAAAAAGCTATTGAAAAAAAAGTTGTAGGGGGGGGG
GGGGTTTAGAACAAGGGACGGCCCACAATATGAGCATATTCATTTTTCTT
ATAAGCATTTACTTTATAAGAAGCAAATCAATAACTCTAGATAGACAGTG
ATATACCTACCTTTCGGTAATTAGACCTTGCAAAGTAAACAAGGGACGGT
GCAAAATATGAGCATGTTTATTTTTCTTATAAGCATTTACTTTATAAGAA
GCAAATCAATAACTCTAGATAGACAGTGATATACCTACCTTTCGGTAATT
AGACCTTGCAAAGTAAACAAGGGACGGTGCAAAATATGAGCATGTTTATT
TTTCTTATAAGCATTTACTTTATGAGAATCAATCAATAACTCTTGATAGA
CGGTGATACCCGGGGGGGGGGTACTACCCTTGTCGCCCGACGGGGGGGCT
CCGCTGAGGTTCGAAAAATGGACCCTACGAGGGACTCGAAATTTGCGAAA
AAAGTGACCCTGAATGGGACTGAAATTCCAAAATTTTCTCAAATTTTCTA
CTTTTTCCCCAAATTTTCCAAGATAGGCACCCTACGAGGGACTGATTTTT
CTATTTTGGTGTTTTTGCGACCCTACCTNCCCCCCCCCCCCCGGGCGGTG
ATATACCTTCGGTAATTAGTTCTTACAAAGTAAACAAGGGATGGCGCACA
ATATGAGCATATTTATTTTTCTTATAAGCATCTACTTTATAAGAGTTCTT
AAAAATTAAACAACAATTGTTCTTAAATTGGTCTTATTTTTTTAGAGATT
TTAAGCCTCGTTGTTCTTATAAAATTGTTTCATCAACGCTCAATGTAAAG
TAGATTTAAGATTAGCTTCAATCTCTACTTCTTGTTTTTCAAATTCTAGG
CGAAATTTTCGACTTTAAGTCGTCTTGTTAATTTTTAAGTTGTTTGAATT
TCAGCAGAAATTAACATTAAACTTCCGACTTATTACCTGTGACATGGCAA
ATTTTATTTTGAGTTTTATTTTGTTCTTTTTTTTAGCACGAAAGATGGAA
TCATCTCACAAGAATGAATATTTTTCTGTATTTTTAATGTTTTAATTTTA
ATCATTTTTTTACAAATTGAAAATATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012904-exon-sc0000157-1575043694:250055..250592 | TCONS_00012904-exon-sc0000157-1575043694:250055..250592 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1575043694:249620..249749 | TCONS_00012904-exon-sc0000157-1575043694:249620..249749 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1575043694:249180..249286 | TCONS_00012904-exon-sc0000157-1575043694:249180..249286 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1575043694:248798..248894 | TCONS_00012904-exon-sc0000157-1575043694:248798..248894 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1575043694:248237..248379 | TCONS_00012904-exon-sc0000157-1575043694:248237..248379 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1575043694:239066..239156 | TCONS_00012904-exon-sc0000157-1575043694:239066..239156 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1510915933:250055..250592 | TCONS_00012904-exon-sc0000157-1510915933:250055..250592 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1510915933:249620..249749 | TCONS_00012904-exon-sc0000157-1510915933:249620..249749 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1510915933:249180..249286 | TCONS_00012904-exon-sc0000157-1510915933:249180..249286 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1510915933:248798..248894 | TCONS_00012904-exon-sc0000157-1510915933:248798..248894 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1510915933:248237..248379 | TCONS_00012904-exon-sc0000157-1510915933:248237..248379 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1510915933:239066..239156 | TCONS_00012904-exon-sc0000157-1510915933:239066..239156 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1491911889:250055..250592 | TCONS_00012904-exon-sc0000157-1491911889:250055..250592 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1491911889:249620..249749 | TCONS_00012904-exon-sc0000157-1491911889:249620..249749 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1491911889:249180..249286 | TCONS_00012904-exon-sc0000157-1491911889:249180..249286 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1491911889:248798..248894 | TCONS_00012904-exon-sc0000157-1491911889:248798..248894 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1491911889:248237..248379 | TCONS_00012904-exon-sc0000157-1491911889:248237..248379 | Clytia hemisphaerica | exon |
| TCONS_00012904-exon-sc0000157-1491911889:239066..239156 | TCONS_00012904-exon-sc0000157-1491911889:239066..239156 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000157 | supercontig | sc0000157:239066..250592 - |
Blast
BLAST of TCONS_00012904 vs. Swiss-Prot (Human)
Match: RRP8 (Ribosomal RNA-processing protein 8 OS=Homo sapiens GN=RRP8 PE=1 SV=2) HSP 1 Score: 230.335 bits (586), Expect = 3.141e-70 Identity = 108/241 (44.81%), Postives = 154/241 (63.90%), Query Frame = 3
Query: 270 PESKSINSPKPN-DAISKRLSKFQQKMNRKLEGGHFRYINEKLYTTDSHMAVDMFKRQPSLFDVYHKGFESQVLHWPENPVDLIIEFIKEQSEDSIVIDFGCGNAKIGRSVPQKVHSFDLVAVNDDVTVADMKNVPVKSGSVDIAVFSLALMGTNVNDFIAEANRALKISGHLKIAEVKSRFKDVQHFIDGVISHGFDLLSKDDTNKMFIMFDFEKTSNYNKNSKNDKT-IELKPCIYKRR 986
P K+ SP P D+ R + +M ++L+G FRY+NE+LY+ S A +F+ P F +YH+GF+SQV WP PVD I ++++ +V DFGCG+ ++ S+ VH FDL +++ VTV DM VP++ SVD+AVF L+LMGTN+ DF+ EANR LK G LK+AEV SRF+DV+ F+ V GF ++SKD TN F +FDF+KT K + ++L+PC+YKRR
Sbjct: 216 PTEKTEVSPVPRTDSHEARAGALRARMAQRLDGARFRYLNEQLYSGPSSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTGPPLVGPKAQLSGLQLQPCLYKRR 456
The following BLAST results are available for this feature:
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