TCONS_00012906 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012906
Unique NameTCONS_00012906
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3531

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012906 ID=TCONS_00012906|Name=TCONS_00012906|organism=Clytia hemisphaerica|type=transcript|length=3531bp
GTTATCCTTACTAGAAGGAAGCTCCGAAAGAATCAACGTTACCAGATCCA
TATCaacctttgtttttctttgatcCTTGGCAACTTGGTACTGCTTCTCT
CTGAAAAAGAAGGGAAATCAAAAAGTCATTGTATGGTGATCTCAATCATG
ATGTTTTACTTCTTCTTGGCAAGTTTCTTTTGGATGTTATGTGAAGCCAT
CTTTGTGTGGAGAGCTCTTATTACCATCTTCACTGAAAATGATCGATTGG
GATATTATCTACTCTTCGGATGGGGAGCTCCAATGGGTGTAGTGTTAGCG
ACAGGATTGGTCAGTCGAGATAAATTGATCACTGATAAAACGTGTTGGTT
ATCCTGGGAAGATTCAACAATCTACGCCTTCGCTCTTCCGATATTGACCA
TCATTGTGATTAACACGTTGATATTGGCAGTGGTGCTTGTGGCCACCAGC
AAACACGCCCGAGAAACCAAACGTGGAAGAATAAGATCTTTGGCACGCAT
GGTGTTGATATTACTGCCAGTATTTGGATTGACATGGATCTTCGGTGTTT
TGTCGTTCAATGAAGAAACCAAAATCTTCCGATACATATTTGCCACACTC
AACTCATTCCAGGGCTTTTTGATCTTTGTTTGCTACATTCAAGCAAGCCG
AGAGGTGAGAAAAGAGCTTCGCAAAGCAACATGGGACCAGTACAGCAGTC
TATTCAAAAGAAGCTCAAGATCGCATACGATTTCAAGTACTTCATTTTAA
AGACTTTCACAAAGTCAAAATGTTACTTTTTGGGAAGCAGAGAAGGtaga
tttttgaaagaaagatttggtGGCGCTTTTAACAAAATCACATAAGATTT
CAATTATTTCCTTTTAAAGGCTTTCTCGTGAAATAAACTCTTATTGTTGG
AGGAGCAGTGAAGGGTGACCGGCAATTTTTAAGGAACATTTAAAGACACT
TTCAACAGACATTTTAAGGCTGATCTGATATGAATTCACAAATCGAGGTA
TCGATTATATTATATGaggaagttttcaaaatttggtagAATTTGGACAT
AATAActttaagaccatgttcagacgttacggttccgttccgaaacgaaa
cgaaacgaaaagAAACGATCctaaaccaatatgaacacactcgatccgca
acaaaaatcataccggagcgaaacggaataGTAACGTGTGAACACGGTCT
AAAACCGAGTATGGTATGGCAGAATAGATGCCAAAAGGATACTTTCTGgc
cattcaatatttttttcagcaACGTTGCGATTCAATAGAAGTCTTGACAA
AAATTAAACTATTTGTCCGGACaaaaaaactgaaagattttAAAGGCCAT
TAAGTAAATTTTAGATACAACTGAAAAATCTTtacttcaaatttaaattt
actttaaatttatcatatttataGAACGTATAGATTTAAACAAATAAAAT
GTACATAATTATTACATATTTACGTtacaatttttgtaaatatttttaaa
aaaatagaataaCATTATGACAATAAATTTAAATCGTTAGGGATTAGAAT
TATTATCATTGAATTCCTATTTACAAATGAGGAGGGTTTCCTGTAGTTTA
AATACCAGCAGGGATTTGGACAAAAGCGCAAAAGGCGTCGTAAGAAATCA
GGTCGAAACGTCGGCTAAACGTTCTTGTAACGTCAATAgcttcttataga
aaaaatactttgaaaataGCACCACCCTCTAATAAGTACCACCCTCGAAA
CAAAACCGTTTAAACATAGAATAGCATATCACTTTAAACCCCAATGCGAT
TGTAATCAAATCTAAATCGAATATTACCCCCAGTAGTTCGTTTGACAAGG
CATCTCATATCCACGAAGGACGGTTACCATCTATAGTTTATACACCGTGA
TCCACACTGGTTAGATTCGTCAAATCAATCGATGAATGTTGATTCTTAGT
GAATTTACCGGTCGCTTTTCGCCCACCTGCCTTGACAGTCATGACGAATC
TTTTAAATTCATGTCGCCATCTCGAGTCTGTAATACTATAAATCAATGGA
TTGGCACAGATATGAAATAAGTATGGTATGTGCGCTAGATACATCAAAGC
GAAATATGCATCAACACTTAGATCCTTTCCAGAGACATAATTGCTCCAAC
CTTTGATATTGAAATAGAGTGTTACTATGTGTTTTGGAAATACGAAAAGT
ATGAAGACAAACACAACGCTGACCATTGAGTTTATGATacgtttgttttc
tttttgatgGCTAACTTGGTATACTAAATCACTAGCAGTTCTGATGATCG
GTCTAGCGTTGAGCCGGTTCAAGTATCGGATGATTTTAGTGTATAAAGCA
CCGATTAGGATGATCGGGATGACATAATATAAGATGAAAGTAACGCCTTG
ATATACAGTTCCTTCCGAATGGGCAAGAGGCCATTGGATTTTACAAATTT
GTAGTTCTTGGTCTAGTTGGAAATGAGCGAGGAGCGGTGAGATACCAGCT
ATGGCAAATATAAAATTAACAGCTAAGAAACTGTGTAATTTGATAGGTGT
GATATCGAAGTTTGGATGAAATAATTTTAAGTAACGTTCAATACTGATAG
CTAGAATAACTCCAACGGCTAGCATGGCTGAGATCGATTCCACAGATTTG
AAAAGTGAACACAGGAACGGTCCGTACAACCATTTTGGCGTCCAAAATTT
CGGTACAACATTGACAAATTGAAAAATAGCGAATATTAAATCATAAAACG
CTAGCAGACGAATGAGTTTGTTCAAGTTTCCCGTTTTACGTTTACGGCTT
GATTCGGAAACGCAAATAACGAGAGAGTTACCGAAAATACCAACAAAAGC
TGTTACGGCGGCAAAGATGGCGTAAACGCGTTGATAATCGTGCATATTGA
TTCGACGTACGAATTTTGGTTTAACGAATGAGCAGACATCGGTGCCAGTA
AAAAGATCACAAGAACAATTTTGATGCGCGATCCCGAAAAGGTCACATAA
ATCGTAAACATCGCGAATCAAATGAGCCGTAACGGGGAGTTCCGTTGTTC
TTGGTGTCCGGCAATTATCCAATACTTTGTTCCGGGATATGATTCTAACT
GACCGGCAATTACATTCAGATTGTGTCATGTTGAAGAAAGAACAATAATT
GACGGCTAAACCTGGTAACAGATGCGTGTTTTCCAAACTAGTAATGTTAA
GCGTTGAAGCTTGTGGATTAGTATGAAGGATTGTACACAATGATGCAGTA
ACGTTATTTTGATTCACGATAAAGTCTTGACACTGGCATGTTGAATTGGT
GATTCCAGCGCGATGGCAAAGAACAGGTAAGGTATTCTCAGCAAAAGTGA
AAGTCGATAGGAGTAGAAGCCAAAGTAGTTGCGTAGTATATTTCGAAGCT
GATGTAcgtgtcatttttagggaattTTGTAGTTGATTTGCATAAcctga
aaacgaaagcgataaAGTTGATTTAAAATCATCCACATTACATGTCTCTG
TGTCTACGATTTGGATGGATAAATTGAAAAG
Run BLAST on NCBI

transcript from alignment at sc0000157:311296..318004-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012906 ID=TCONS_00012906|Name=TCONS_00012906|organism=Clytia hemisphaerica|type=transcript|length=6709bp|location=Sequence derived from alignment at sc0000157:311296..318004- (Clytia hemisphaerica)
GTTATCCTTACTAGAAGGTAAGAGAAAAGGCTCAAAATCTTAGTCATGAT
CAAAGATTAAGCTGGAATACACTTCAGTGTAGCTCTGCGCTTATCAGGTC
ACCCGAGGTTACAGGAACATCTATTCCTCTTAAAATTCTATAGTTTTGAA
AGTTTGAAGATAATAATTTAAGATTTAAATGATCTGTGCTTGTCAGCCGA
GTAGCAATAGAGGAAAGCAGGGCTATTTACCTCTCGTATATTTCACCCAA
AGCTGGTAACTTTACAAACTTCATCTCTGAGATAATCCTTGATTTAAAAG
TATGAATTTATCAGGCATGTAGCAACTGAGGAAGAATGGGGATTAAATGC
ACATAAAATCAAGAAGATGGGATCTCATTTTTCAATTTTCTACATATGAA
GCACAATGTGTTTAAATATTGGAAAATTTCTTTCCAGGAAGCTCCGAAAG
AATCAACGTTACCAGATCCATATCAACCTTTGTTTTTCTTTGATCCTTGG
CAACTTGGTACTGCTTCTCTCTGAAAAAGAAGGGAAATCAAAAGTAAGGC
AATTCAAAGATAGTGTTTTCAGTTGATAAAAAGTTTTTCATGAACCACAC
TCAGTTAGGTGTACTGAAAATAAAATTTCCTTAAATAAAACTTCTACCAA
TTAATCTTCTTCTGGATCCGCCTCTCCAAGCCATCTTAAGCTATTCTAGG
CTTTCACAAAATAATTATGGTCATTAATACATTCACCGACATTTAATATT
GTCTCTGATAATAATAATAATACCTCTTGTACCGGGTTCACTAAACTCTT
TCCCAAAACTGATTATGTGTTAGTCAAATATTCCAATGCTAAAAATAATA
TCTCACACCATCACTCTTCTTCCCCCTACTCACCAGTAGGACGAATTTGG
AAATTTAAACGCTTGATTGGTCAGTGCAATACATTTTAAAAACTATTTTA
TTGTTATCAACCTCGTATCGATCCTTCTTTTTTCACCAGAGTCATTGTAT
GGTGATCTCAATCATGATGTTTTACTTCTTCTTGGCAAGTTTCTTTTGGA
TGTTATGTGAAGCCATCTTTGTGTGGAGAGCTCTTATTACCATCTTCACT
GAAAATGATCGATTGGGATATTATCTACTCTTCGGATGGGGTAAATCTTT
TCTTTGATAAATAATACAATCTCATTTTGGCCCTTGAACAATTCAAAACT
GTAAAAGTTACTCGACTAGGTTTAGCGTCCATCCTAAAATACATATCATT
CAAAAAACAATACCGCGATGCGACAGAGCCTGGAGGTCTGGCGGCGAATA
ACGCTTATGTCTGTGAACAGGCCAACGTAATGATTTTGGGCCCAATATTT
CATTCTTTGTGCCACTGATAAAGAATCTGTAACGATTTATTTTTCAGGAG
CTCCAATGGGTGTAGTGTTAGCGACAGGATTGGTCAGTCGAGATAAATTG
ATCACTGATAAAACGTGAGTTGCGATCCGATTGGAAGGTCTCGTTGACTT
CTTGATTTATTCGACCGCAAACTGATAGTCAAATTTTTATTTATTTTTCT
GAGGAAAGCTCTTGGACCCCGAATTGTGTTTTTGCTTTTCTGTTCTCTAC
TTTAGCAAGTGAAAGTATTCTTTATATAGTTGTAAAATTACCCATAATCC
TTTTTGTTGCCCTTTTATTCTCGATTCCAAATTCATTACACTGTGCGCAC
CCCTGAAAGAGTTTTGTTGAACAGACTAGGATTTACACTTAAAGCAAAGG
CTTACTGATAATAAAGAGCAACTTACTGAAGGTTCCTCATGGTCCGTTTT
AGGTGTTGGTTATCCTGGGAAGATTCAACAATCTACGCCTTCGCTCTTCC
GATATTGACCATCATTGTGGTAAGTAGAGTTCTGATGTTGTCAGGATTTG
AGCATAATTATTTTGTACAATGCTTTCCTCTATATCATAACCATCGTTGC
TTGCCGAGTCTTTTGAGACGGTTGCCTAAAAATGACAAAGAATAGAATTT
CTGAAAGTATCACTGAATACATAGCGGGGTCATGGGAAGTGGTAAGTAGG
TCCTGATTATCGCGTGGCGTTTTTATTGCCCCTTTTTACATACAAAAGAA
AAAAAATTGGCTATAAGAGCAAAAATACAAACTATATTTTGGGATTAATT
GGCTCTGAACCTGATCATGTTTTTAAATAAAATTAGAAACTTTCAATAAT
TTTAGATTAACACGTTGATATTGGCAGTGGTGCTTGTGGCCACCAGCAAA
CACGCCCGAGAAACCAAACGTGGAAGAATAAGGTAAAATGAGTTAAAATC
TCTACATAGTTGCTTGTCCTATAAGAAGACAACAAGGGAGAAATCAGGAT
GGGGGTCGCTGCTGGATAAAGTCCGTTTTAGATTTGGGACATCAGTAAAT
AATAAATAATGTCTAACTATTAATAAAAGAATAAATTAATTTTAGATGAA
TTCTTCTNGACAACAAGGGAGAAATCAGGATGGGGGTTGCTGCTGGATAA
AGTCCGTTTTAGATTTGGGACATCAGTAAATAATAAATAATGTCTAACTA
TTAATAAAAGAACAAATTCATTTTATGGTTTTATGGTTCCGGCAAGGTCG
ACGAGCTAACATATTCATAACGATAAAAAAAAAGAAATTGAAAAGCTCGG
CTGTTCCCAAACCCTCGCTTCAAGAGATCAGGAATCAAGGGACATTGTTT
CAGCCTTCCTTTGCAATAAAGGTCTAATAACAGCCTCAGCCTTAAAATAG
AAAGCTGAAACCTGTATTTAGATTCTCAAACTCTGGATTAGAGATTCCGG
AAGCTACTGAACTAAAAATTTGTTACCGTTTCTCACCTTAGATCTTTGGC
ACGCATGGTGTTGATATTACTGCCAGTATTTGGATTGACATGGATCTTCG
GTGTTTTGTCGTTCAATGAAGAAACCAAAATCTTCCGATACATATTTGCC
ACACTCAACTCATTCCAGGTCAGTGTGCTATTATTGGTGTTACTGTTAGT
CTTGACTATGTTAGTTTGTTAGCTTGTGATATTGATTTTATGTTAAGACT
ATAAAATAAAAGGTAAGGTAAAAACAGTGGAACTGAGACCTCGTAAAATG
CCAATTGTTGGCTATGAATTGCTGCCTCCGCAGGCTAAAATTGCAGTCCA
TAGAACCATGTACTAAAGTCCAATAGCTAATTCGCTATAAGTGTGCACTC
TGTTTTACTTCCGTGTGGAAGTGTAATTAGATAAATTTCCATGAGGGTGG
TTTCCACCTAACAAAAAAGAGTGCAGCGAATGGACTTTAAGACTAATACT
TGTAGAGTAAGCAAAAACAGAGACAAAAGTGTAAAGTTACACTTAGCACA
GTGTTCAAATTTGCTTCATGTGATAAAAGCAAATGTCATGGACTTAATAC
CATAAAAGGACTTTGATTTTCATTACACTGTGCTTATTATTCATTTTAGG
GCTTTTTGATCTTTGTTTGCTACATTCAAGCAAGCCGAGAGGTAAAGTTT
TACTTTGATTACACTTTTGTCGTTTCATAAGAACAGGAAGGCTAAAAAAA
GCAAGAAATAATAATTTAAACAGCCGCCAGTAGAATCTTCAGAATTACTT
TTTGATGAAGATTGGAATAAATAAAAATTCTATTTCTTGTATAAGAATCT
TCACAAAAATGAACTTCATTTATCGATACAACCCCATCCCAACCCAACAA
AAAAACAAAATTTGTCGAGAACCCGGGAGCCTTATCTGATGATCNATCGA
TACAACCCCATCCCAACCCAACAAAAAAACTAAATTTGTCGACAACCCGG
GAGCCTTATCTGATATATTCGGTTCATTCTAGGTGAGAAAAGAGCTTCGC
AAAGCAACATGGGACCAGTACAGCAGTCTATTCAAAAGAAGCTCAAGATC
GCATACGATTTCAAGTACTTCATTTTAAAGACTTTCACAAAGTCAAAATG
TTACTTTTTGGGAAGCAGAGAAGGTAGATTTTTGAAAGAAAGATTTGGTG
GCGCTTTTAACAAAATCACATAAGATTTCAATTATTTCCTTTTAAAGGCT
TTCTCGTGAAATAAACTCTTATTGTTGGAGGAGCAGTGAAGGGTGACCGG
CAATTTTTAAGGAACATTTAAAGACACTTTCAACAGACATTTTAAGGCTG
ATCTGATATGAATTCACAAATCGAGGTATCGATTATATTATATGAGGAAG
TTTTCAAAATTTGGTAGAATTTGGACATAATAACTTTAAGACCATGTTCA
GACGTTACGGTTCCGTTCCGAAACGAAACGAAACGAAAAGAAACGATCCT
AAACCAATATGAACACACTCGATCCGCAACAAAAATCATACCGGAGCGAA
ACGGAATAGTAACGTGTGAACACGGTCTAAAACCGAGTATGGTATGGCAG
AATAGATGCCAAAAGGATACTTTCTGGCCATTCAATATTTTTTTCAGCAA
CGTTGCGATTCAATAGAAGTCTTGACAAAAATTAAACTATTTGTCCGGAC
AAAAAAACTGAAAGATTTTAAAGGCCATTAAGTAAATTTTAGATACAACT
GAAAAATCTTTACTTCAAATTTAAATTTACTTTAAATTTATCATATTTAT
AGAACGTATAGATTTAAACAAATAAAATGTACATAATTATTACATATTTA
CGTTACAATTTTTGTAAATATTTTTAAAAAAATAGAATAACATTATGACA
ATAAATTTAAATCGTTAGGGATTAGAATTATTATCATTGAATTCCTATTT
ACAAATGAGGAGGGTTTCCTGTAGTTTAAATACCAGCAGGGATTTGGACA
AAAGCGCAAAAGGCGTCGTAAGAAATCAGGTCGAAACGTCGGCTAAACGT
TCTTGTAACGTCAATAGCTTCTTATAGAAAAAATACTTTGAAAATAGCAC
CACCCTCTAATAAGTACCACCCTCGAAACAAAACCGTTTAAACATAGAAT
AGCATATCACTTTAAACCCCAATGCGATTGTAATCAAATCTAAATCGAAT
ATTACCCCCAGTAGTTCGTTTGACAAGGCATCTCATATCCACGAAGGACG
GTTACCATCTATAGTTTATACACCGTGATCCACACTGGTTAGATTCGTCA
AATCAATCGATGAATGTTGATTCTTAGTGAATTTACCGGTCGCTTTTCGC
CCACCTGCCTTGACAGTCATGACGAATCTTTTAAATTCATGTCGCCATCT
CGAGTCTGTAATACTATAAATCAATGGATTGGCACAGATATGAAATAAGT
ATGGTATGTGCGCTAGATACATCAAAGCGAAATATGCATCAACACTTAGA
TCCTTTCCAGAGACATAATTGCTCCAACCTTTGATATTGAAATAGAGTGT
TACTATGTGTTTTGGAAATACGAAAAGTATGAAGACAAACACAACGCTGA
CCATTGAGTTTATGATACGTTTGTTTTCTTTTTGATGGCTAACTTGGTAT
ACTAAATCACTAGCAGTTCTGATGATCGGTCTAGCGTTGAGCCGGTTCAA
GTATCGGATGATTTTAGTGTATAAAGCACCGATTAGGATGATCGGGATGA
CATAATATAAGATGAAAGTAACGCCTTGATATACAGTTCCTTCCGAATGG
GCAAGAGGCCATTGGATTTTACAAATTTGTAGTTCTTGGTCTAGTTGGAA
ATGAGCGAGGAGCGGTGAGATACCAGCTATGGCAAATATAAAATTAACAG
CTAAGAAACTGTGTAATTTGATAGGTGTGATATCGAAGTTTGGATGAAAT
AATTTTAAGTAACGTTCAATACTGATAGCTAGAATAACTCCAACGGCTAG
CATGGCTGAGATCGATTCCACAGATTTGAAAAGTGAACACAGGAACGGTC
CGTACAACCATTTTGGCGTCCAAAATTTCGGTACAACATTGACAAATTGA
AAAATAGCGAATATTAAATCATAAAACGCTAGCAGACGAATGAGTTTGTT
CAAGTTTCCCGTTTTACGTTTACGGCTTGATTCGGAAACGCAAATAACGA
GAGAGTTACCGAAAATACCAACAAAAGCTGTTACGGCGGCAAAGATGGCG
TAAACGCGTTGATAATCGTGCATATTGATTCGACGTACGAATTTTGGTTT
AACGAATGAGCAGACATCGGTGCCAGTAAAAAGATCACAAGAACAATTTT
GATGCGCGATCCCGAAAAGGTCACATAAATCGTAAACATCGCGAATCAAA
TGAGCCGTAACGGGGAGTTCCGTTGTTCTTGGTGTCCGGCAATTATCCAA
TACTTTGTTCCGGGATATGATTCTAACTGACCGGCAATTACATTCAGATT
GTGTCATGTTGAAGAAAGAACAATAATTGACGGCTAAACCTGGTAACAGA
TGCGTGTTTTCCAAACTAGTAATGTTAAGCGTTGAAGCTTGTGGATTAGT
ATGAAGGATTGTACACAATGATGCAGTAACGTTATTTTGATTCACGATAA
AGTCTTGACACTGGCATGTTGAATTGGTGATTCCAGCGCGATGGCAAAGA
ACAGGTAAGGTATTCTCAGCAAAAGTGAAAGTCGATAGGAGTAGAAGCCA
AAGTAGTTGCGTAGTATATTTCGAAGCTGATGTACGTGTCATTTTTAGGG
AATTTTGTAGTTGATTTGCATAACCTGAAAACGAAAGCGATAAAGTTGAT
TTAAAATCATCCACATTACATGTCTCTGTGTCTACGATTTGGATGGATAA
ATTGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007240XLOC_007240Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012906-exon-sc0000157-1575043694:317988..318004TCONS_00012906-exon-sc0000157-1575043694:317988..318004Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1575043694:317462..317567TCONS_00012906-exon-sc0000157-1575043694:317462..317567Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1575043694:316865..317015TCONS_00012906-exon-sc0000157-1575043694:316865..317015Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1575043694:316541..316607TCONS_00012906-exon-sc0000157-1575043694:316541..316607Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1575043694:316136..316202TCONS_00012906-exon-sc0000157-1575043694:316136..316202Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1575043694:315723..315799TCONS_00012906-exon-sc0000157-1575043694:315723..315799Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1575043694:315037..315163TCONS_00012906-exon-sc0000157-1575043694:315037..315163Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1575043694:314514..314555TCONS_00012906-exon-sc0000157-1575043694:314514..314555Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1575043694:311296..314172TCONS_00012906-exon-sc0000157-1575043694:311296..314172Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1510915933:317988..318004TCONS_00012906-exon-sc0000157-1510915933:317988..318004Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1510915933:317462..317567TCONS_00012906-exon-sc0000157-1510915933:317462..317567Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1510915933:316865..317015TCONS_00012906-exon-sc0000157-1510915933:316865..317015Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1510915933:316541..316607TCONS_00012906-exon-sc0000157-1510915933:316541..316607Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1510915933:316136..316202TCONS_00012906-exon-sc0000157-1510915933:316136..316202Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1510915933:315723..315799TCONS_00012906-exon-sc0000157-1510915933:315723..315799Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1510915933:315037..315163TCONS_00012906-exon-sc0000157-1510915933:315037..315163Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1510915933:314514..314555TCONS_00012906-exon-sc0000157-1510915933:314514..314555Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1510915933:311296..314172TCONS_00012906-exon-sc0000157-1510915933:311296..314172Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1491911889:317988..318004TCONS_00012906-exon-sc0000157-1491911889:317988..318004Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1491911889:317462..317567TCONS_00012906-exon-sc0000157-1491911889:317462..317567Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1491911889:316865..317015TCONS_00012906-exon-sc0000157-1491911889:316865..317015Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1491911889:316541..316607TCONS_00012906-exon-sc0000157-1491911889:316541..316607Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1491911889:316136..316202TCONS_00012906-exon-sc0000157-1491911889:316136..316202Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1491911889:315723..315799TCONS_00012906-exon-sc0000157-1491911889:315723..315799Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1491911889:315037..315163TCONS_00012906-exon-sc0000157-1491911889:315037..315163Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1491911889:314514..314555TCONS_00012906-exon-sc0000157-1491911889:314514..314555Clytia hemisphaericaexon
TCONS_00012906-exon-sc0000157-1491911889:311296..314172TCONS_00012906-exon-sc0000157-1491911889:311296..314172Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000157supercontigsc0000157:311296..318004 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.203273	0.0864967	0.109396	0.010447	0	0.0606757	0.009095	0.158016	0.099933	0.328579	0.343727	0.16691	0	0	1.02036e-07	0.0188981	0	0.560821	0	0	0	0	0	0	0	0	0	0	2.07283	0.880103
Blast
[Close]
BLAST of TCONS_00012906 vs. Swiss-Prot (Human)
Match: AGRD1 (Adhesion G-protein coupled receptor D1 OS=Homo sapiens GN=ADGRD1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.918e-30
Identity = 79/233 (33.91%), Postives = 132/233 (56.65%), Query Frame = 1 
Query:    1 VILTRRKLRKNQRYQIHINLCFSXXXXXXXXXXSEKEGKSKSHCMVISIMMFYFFLASFFWMLCEAIFVWRALITIF-TENDRLGYYLLFGWGAPMGVVLATGLVSRDKLITDKTCWLSWEDSTIYAFALPXXXXXXXXXXXXXXXXXXXSKHARETKR-----GRIRSLARMVLILLPVFGLTWIFGVLSFNEETKIFRYIFATLNSFQGFLIFVCYIQASREVRKELRKAT 681
             +L+     +NQRY IH NL F++++  ++LL+S +     + C V+++++ YFFL++F WML E + ++  +I +F +E+ +  YY   GWG P+ + + +   + D   T   CWLS     I+AF  P L +IV+N  IL  V    S+ + +  +        +  A+ V +LLP+ G +W+FGVL+ N    +F+Y+FATLNS QG  IF+ +   + EVR   +  T
Sbjct:  589 AVLSSVSTIRNQRYHIHANLSFAVLVAQVLLLISFRLEPGTTPCQVMAVLLHYFFLSAFAWMLVEGLHLYSMVIKVFGSEDSKHRYYYGMGWGFPLLICIISLSFAMDSYGTSNNCWLSLASGAIWAFVAPALFVIVVNIGILIAVTRVISQISADNYKIHGDPSAFKLTAKAVAVLLPILGTSWVFGVLAVNGCAVVFQYMFATLNSLQGLFIFLFHCLLNSEVRAAFKHKT 821
The following BLAST results are available for this feature:
BLAST of TCONS_00012906 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AGRD12.918e-3033.91Adhesion G-protein coupled receptor D1 OS=Homo sap... [more]
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