TCONS_00012908 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012908
Unique NameTCONS_00012908
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2107

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012908 ID=TCONS_00012908|Name=TCONS_00012908|organism=Clytia hemisphaerica|type=transcript|length=2107bp
CCTAAAACTGGGTTTATTAATGCGAGTACACAATAGTTCATTAAGACCCT
TAATTAAAAAGCAGACTGTGATGTCCGATTAATGTAGACAAAATTCCTTC
TTAATGGTGTTAAGTCGTTTCTTTAtctgcaaaatacaaaaaacagTTTA
AAATCAAGGTATTGTCTTTCTCTTTAAGTCCTTAATACGATGATTCAGAG
TATTTATTCCTCAgtgtttaaaaaacaaaaatcagtCTAAAATCAGAATA
CTGAACTGAGAGGATGAGGTGGTTCACAGGTGAACAAATTCTATGGTTAC
TAATTATGGTGGATTTGCAAACAGTTAGTATCCTTGGGACTGATGAATTC
ATTGATGTCGAATATAGATCAAATGAAGTTGATAAATTCAAAATGCACAA
CACGTCATTTGAAGAGTCAGTTTGCAAAACAAAATTCAACGCTAGATTAG
AATATAAATGGTCAGACGGTGTAGAATGTAAGTGTGCTGTAGGTGAAACA
TTTATCGCTTTGAATGGAGAAGTTCCTAAATGTCAAGTTGAAGATATCAA
CAATAGAATTTTCGATTGTTCTTGTAGTGGGCAATGCtctcaaaatttaa
agaagAATTGGTACACTGACAGAATCATTACGAAGATTTCTTTAGGAGAC
TTGGACTGTTCGGGAAATCAATTTCAGGAGAGCATCTACTCATGGAATGG
TAAAAGGTTTATCCCCAGATCAACCTTTGCCGAAGATTTCACTGGAGAAT
TTCAAACAGCTAGCATTTTAAACGTCCAGtggcAGAAGAATAGACCATCT
GGTGTATACAACAAGTACGAAGGCGTGTTGATTAAATACAAATTAACTTT
GATGTGTGGTGGAAAAACGACCGAAAGATGTCTTATTTGGAAAGGCGAAG
GGAAACAGAAATCTATCAGAATCAACTATGATACCATTCCACCACCCACC
ACCCAACCAACCATTCCACCTAACACTCCATCCACAAAGCCAACAACTAC
TACGACAACCACACAATCAGAAACACGCACAACGACGACAAATCCTGAAC
GCACGACAAATAGCAATAATATTGACCATTCAAAGACATTTGACACCACC
AACAAACCGACGATGACGACGCGTTCTATCAGCGGTAGCGATACAACGAC
TCACGAATCTTCAACAACGACGATCGTTATCGGCAGTTTGGTCGGCGTTG
TCGTGCTTCTCAAAATCGTCATTGTTTTGGTCATTGTTTGTTGTCTCAAG
AAAAGGGAAGGCgaagtaaacaaaaacaaagcacCAATCCGATTTCACGC
TAATAACCCTGCATTCAAAGCATCCACACAAAGtcaacaacaacacaaca
aTTATGAATATCAATACCCTGAAGTTGGACCTGCATCGAATGTCCATCAG
AACCAACAACCGAGAACTACTGGATATGAGTTTGATCCTGGAGATGAAGA
AAACTCACAGTNAGAACCAACAACCGAGAACTACTGTATATGAGTTTGAT
CCTGGAGATGAAGAAAACTCACAGTATCAGCCATACCTCAAACCGGTCAC
CTCATTATACGAAACCATACCTTACAACGATTGACTCTGAACAATTATTT
CCCAATGGctttttatattataatttaTTATAGGACACTTTAGCAAGTAT
AATCATCGGGCCTTTTTCGGTGAATTCGTGCCTCTGTTACATGCTTTTTT
CTACCGTGATCACCAGTTTAGTTTTTTTGcaatttaacttgaaaatatta
tatagcgTCAAAAACATGATGGCGTTTANGCACCAGTTTAGTTTTTTTGC
AATTCaacttgaaaatattatataacgTCTAAAACATGATGGCGTTTATT
TCAATAACATTATTATTCAAAGGATCGAAGATAGGAAAAAACTTAAGCGT
CCCATTTCTTTGTCCCAAAAGTTCTTTTTTAAAACTCttgacttaatttt
ttttcagacaggtaattttttttcatagccccCAAAATGATtcccggaca
attcccccctggtgaattcccacccatatattttcatatgtgtTTTTAAG
TTTCGAAATCATGGACTGTAACGTtgaagttttcttataaaaaagtgatt
CCATTCC
Run BLAST on NCBI

protein sequence of TCONS_00012908-protein

>TCONS_00012908-protein ID=TCONS_00012908-protein|Name=TCONS_00012908-protein|organism=Clytia hemisphaerica|type=polypeptide|length=409bp
MRWFTGEQILWLLIMVDLQTVSILGTDEFIDVEYRSNEVDKFKMHNTSFE
ESVCKTKFNARLEYKWSDGVECKCAVGETFIALNGEVPKCQVEDINNRIF
DCSCSGQCSQNLKKNWYTDRIITKISLGDLDCSGNQFQESIYSWNGKRFI
PRSTFAEDFTGEFQTASILNVQWQKNRPSGVYNKYEGVLIKYKLTLMCGG
KTTERCLIWKGEGKQKSIRINYDTIPPPTTQPTIPPNTPSTKPTTTTTTT
QSETRTTTTNPERTTNSNNIDHSKTFDTTNKPTMTTRSISGSDTTTHESS
TTTIVIGSLVGVVVLLKIVIVLVIVCCLKKREGEVNKNKAPIRFHANNPA
FKASTQSQQQHNNYEYQYPEVGPASNVHQNQQPRTTGYEFDPGDEENSQX
EPTTENYCI
Run BLAST on NCBI

transcript from alignment at sc0000157:364949..371576-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012908 ID=TCONS_00012908|Name=TCONS_00012908|organism=Clytia hemisphaerica|type=transcript|length=6628bp|location=Sequence derived from alignment at sc0000157:364949..371576- (Clytia hemisphaerica)
CCTAAAACTGGGTTTATTAATGCGAGTACACAATAGTTCATTAAGACCCT
TAATTAAAAAGCAGACTGTGATGTCCGATTAATGTAGACAAAATTCCTTC
TTAATGGTGTTAAGTCGTTTCTTTATCTGCAAAATACAAAAAACAGTTTA
AAATCAAGGTATTGTCTTTCTCTTTAAGTCCTTAATACGATGATTCAGAG
TATTTATTCCTCAGTGTTTAAAAAACAAAAATCAGTCTAAAATCAGAATA
CTGAACTGAGAGGATGAGGTGGTTCACAGGTGAACAAATTCTATGGTTAC
TAATTATGGTGGATTTGCAAACAGTTAGTATCCTTGGGACTGATGAATTC
ATTGATGTCGAATATAGATCAAATGAAGTTGATAAATTCAAAATGCACAA
CACGTCATTTGAAGAGTCAGTTTGCAAAACAAAATTCAACGCTAGATTAG
AATATAAATGGTCAGACGGTGTAGAATGTAAGTGTGCTGTAGGTGAAACA
TTTATCGCTTTGAATGGAGAAGTTCCTAAATGTCAAGTTGAAGATATCAA
CAATAGAATTTTCGGTAGGTATATGGTATATTTNTCTACCCTGCTTTTTA
GACCAACCTTGGAGCAAGTAACAGAAGCACCTGAATAGAAGAGATCACTT
TTGTTTTTAGGGAGTGGTCAGAAAGTAACTACTAGGGGGGGATGGAGGAT
TCTAGGGGGGGGTTCCAAAATTTTTTCGAGGGTTTAGGGGGGGTTTCAAA
TTTTTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAATC
TTTTGGGCAACTCAAGAGAAAATGTAGGAAGTCTAATTTCATAGTTTTAC
GTTTCAAGATTTCAAAAATTTTTCGGCCTGACGGCCGACAACTCTGAATT
TATTTTATTGAATATATGTACATGTCATACTAACATTATTTGGGCATCAT
CGCCTTGCCCTTTTCGTTTGTAGCATTGAGCTAGATGAGGGAAGTAGATT
AGTAGCTTTCACAGCTCATCAGAGTGGTTTGAAAAAGTACTTTTTAGAAA
GAAATTTGTCAAAACAAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCC
CGTCGGCGCAAACCATGGTTGTGCCTCCTTAGTCTCTACTAATATCTTAT
AAATTACATACACAGAGCTTTGACAGACCCTGGAAAACCTGAAAAATATA
AGTTTATAGAAAAATTTCAAACTCAGAGAATTCAGAATAGCTTGTATTTT
AGGGTCTCGAGTACCTGATCTTCAAAATTTTCTCCCTTCGGGGCCAACCA
TGGTGGCCCCTCAGGATATTTTGAGTAATTGAGATGCCTCCGTAATGTAG
GGAGATTGTGTATCAGGGAAAATAAGCCGTAATTGTCTCCCAAAACTTAG
GGAAACTCAGAGAAAATAACTTGTTGATTCTTATTTTAACCCTGGACAAT
ACCTTTAGGAGATCACACTACCATTTTGATTGACGTTTACACCACGGGTT
TTTTTCTTTTGTTTACTTCAGAGAAATTCCGTCGTAACCATGGAAAATCC
CGTGGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTAAAAATTT
TTCTAGTAGGGGGGGGTGCGAAAAAATATTGGGCCTTATGAGGGGGGGTT
CGAAATTTTTTTCCAGGCTAGGGGAGGGGGTGCAAAAGTTTTTTGGGATT
TTTCAAAATATCCTCCACTCCCCCCTAGTAGATACTTTCTGACCACTCCC
TAACAGTAATCCATGTATTTTAAAGAATTAATGAATAATTATAACAAGAG
CTGCAATATGATGATAATCGTTTCTCCTGCAACTGCGAAAGAAAAAAGTG
CGGCTAAATCCTGACAATGCGGATCTATTTTCCACTTCCTATCTCTCGAT
CTCCTTTTCTATTTTCAAGTAACTGAGACTTAGTTTCTCATTTCTGACTG
AGTTTTCATACCTGTCAATCATTTGTTCATCAATTTCGACCAGTCTAATT
TTCGCACCGAGTGGGATTCGACCCACCACCAAAGAAAGACCTTCGGATCC
GGAAGCCAGCGCTCTATCCCTTGAGCCATCGCCGCACAGCAAACCCACGC
AATTCATAACATTTTATACCAAACTGGCAAAATACGGGGGTAATGTTATT
ATAATATGGGTAAAAGTCCCCCTTTTTTAACCTGACTGAAATTCGAGCCG
TTACTAGCAAGCCTGCGGGGCCCAAGGCGCCGAGTATGCACCCGGCACAG
TGACAAGCCGTTACTAGAAACCCTGGCCCTACATCGAAGACGCCAAAAAA
TAAAAATTTAAAGTTTCCGCATTGTCAGGATTTAGCCGCTTCTAAAGAAA
AAGAAAGAATAAGAAATACTTTCTTTTTTCTCATCATGCATTCCACATTC
CACTTAACTGTTTTATTAGATTGTTCTTGTAGTGGGCAATGCTCTCAAAA
TTTAAAGAAGAATTGGTACACTGACAGAATCATTACGAAGATTTCTTTAG
GAGACTTGGACTGTTCGGGAAATCAATTTCAGGAGAGCATCTACTCATGG
AATGGTAAAAGGTTTATCCCCAGATCAACCTTTGCCGAAGATTTCACTGG
AGAATTTCAAACAGCTAGCATTTTAAACGTCCAGGTCCTTTTTTTGTTTT
TGTTGATCTTGATTTTGCTGAACATCTATTTACTTTAAATTTGGAGTACT
AAAGCAACTTAGATTTACTAAGACAACTTATAGTGGGGTCGTTTAGCATA
ATTTACGGGAAAACAATATGATCTAGCTGAAACTTTCTCCAGACCTTCTC
TATAGGATGGTTATGCCTCAGGAAAAATTCCCCTAAAATCCCACTGGTGG
AACATCCCTTTTTTGGAATATTTCCTTTTTCCCCAGGCAAAATCCTAAGG
GCGAAATTTTTTGAAAATTTCAAACTCATTTTCAAACATTATCAAGTATA
CCATTCGAAAGCTCTCGAAAAACTATATAGAAGACTTTTAAACGGGTATA
GCCGATTTCATTACCTAACTCAAGATAATTCACGCAGAAGNNNNNGTCTA
TGGTCAATTTTGACCAAAGTGTGGCGAAAAGTGGAACTTGCGCATGAAAT
ATCTCGAGTTAGGTAAGGAAATCAGCTATAACCGTTTAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTTTTTCCTGAGGTATAAGCATCCTATAGAGAAGGTCTGGAGAAAG
TTTCAGCTAGATCTTATTTTTTTTCTACAAACAGCCTGTATTTTTGTAAC
ACGACCACACTATTAGAATTACCCAGTCAACTTAGGAGTACTAAGTCAAC
GGTAATCGTATAAAATAATTAAAAACCCAAAATATGATGGTTGAGAATTC
TTTTCTTGCTTTTATTAACGGAAAAAATTTTTTTCAGTGGCAGAAGAATA
GACCATCTGGTGTATACAACAAGTACGAAGGCGTGTTGATTAAATACAAA
TTAACTTTGATGTGTGGTGGAAAAACGACCGAAAGATGTCTTATTTGGAA
AGGCGAAGGGAAACAGAAATCTAGTAAGTTCTTCAACATTTTCATGTTCG
TATTTTTTGAATTCGCCTCTTTGAATCATTACAAGTGCATTGGACTGTAA
TCTAGAACATCTAGAGTCTCGCTTTTCGAAAAGACGAGGGCGCTACTACT
TTCATTGCATAGTTCTCAACAAAATAGAGCCATTTCTCGATTGATCTTCA
TATATTGGGCTGCTCCATTAGAAAACCATACAGGGGGTGGACAAACCTTT
TCAAATCAACAAAAATTATTGGAAATGTGTGGATACCTACTGGAAAATGG
CAAGATTTGCTAAATACCTTTGAAAAAATTATTTTCATACCTTAAAGTGA
GGATGGAAGAAGTAAAATCATTACCCCCTGGAAATTTTTCTTGGATTACC
CTCTGAAAATGTTCGTCCATCCTCCTGTATGGATATAAAATGGAATGGTC
CGTTGCAATCAAATATTTTATCTTAATTTTAAAGTTAAAAAAAAGACATA
AAACAATGAAATGCCCTGTATAAGTCATCAGTCAGAATTTTCAAGTTAGA
ATTCTATAAATGCATAAATTTCAGTCAGAATCAACTATGATACCATTCCA
CCACCCACCACCCAACCAACCATTCCACCTAACACTCCATCCACAAAGCC
AACAACTACTACGACAACCACACAATCAGAAACACGCACAACGACGACAA
ATCCTGAACGCACGACAAATAGCAATAATATTGACCATTCAAAGACATTT
GACACCACCAACAAACCGACGATGACGACGCGTTCTATCAGCGGTAGCGA
TACAACGACTCACGAATCTTCAACAACGACGATCGTTATCGGCAGTTTGG
TCGGCGTTGTCGTGCTTCTCAAAATCGTCATTGTTTTGGTCATTGTTTGT
TGTCTCAAGAAAAGGTAAGACACGATATACACGTTTTTTTATAAGAATAT
CCAAAAATTGTAAGCCTTCGGATGCTCTTTTTTTTAGTTTTAAGCCTACA
AATGTTCTTAAAATGTTCTTAATTTTACCATTTTGTGAGTATTCTTGTGC
AATTCCCTTAGAAATTTGGTGTCCAGAAAGCCTTAAAATGTTCTTAATTA
GTTCTTAATATTTTTGCACTCGAAGCCTTTTGTTATGCTCATATAGTTTG
TTCTTATATAAAATGTTTAAGGTTTTGTGCATCAAGGCCTCTCATTTTCC
CTGAATAAAATTTTGAAATGTAAATTATAATAGAGACTATGTGCTGTTTT
TGTAGAAGTAATGAAAAATATTTGTTCTTTTCTATTAAACATTTAGACCG
TTCGTTCCTATTCTTATGTTACACATTTCAAGGCATACTAACTTAGTAAT
GGTTTGTTATGTCCCCTGGCACACAACGTTGTTTCAACGTTCATCTAACG
TTATATGGACGTTGTGAACGTTACATAAACGTTAAAACAACGTTTTGTGC
CAGCTGGGATCTTCTGTTTCTTTTAGGGAAGGCGAAGTAAACAAAAACAA
AGCACCAATCCGATTTCACGCTAATAACCCTGCATTCAAAGCATCCACAC
AAAGTCAACAACAACACAACAATTATGAATATCAATACCCTGAAGTTGGA
CCTGCATCGAATGTCCATCAGAACCAACAACCGAGAACTACTGGATATGA
GTTTGATCCTGGAGATGAAGAAAACTCACAGTNAGAACCAACAACCGAGA
ACTACTGTATATGAGTTTGATCCTGGAGATGAAGAAAACTCACAGTATCA
GCCATACCTCAAACCGGTCACCTCATTATACGAAACCATACCTTACAACG
ATTGACTCTGAACAATTATTTCCCAATGGCTTTTTATATTATAATTTATT
ATAGGACACTTTAGCAAGTATAATCATCGGGCCTTTTTCGGTGAATTCGT
GCCTCTGTTACATGCTTTTTTCTACCGTGATCACCAGTTTAGTTTTTTTG
CAATTTAACTTGAAAATATTATATAGCGTCAAAAACATGATGGCGTTTAN
GCACCAGTTTAGTTTTTTTGCAATTCAACTTGAAAATATTATATAACGTC
TAAAACATGATGGCGTTTATTTCAATAACATTATTATTCAAAGGATCGAA
GATAGGAAAAAACTTAAGCGTCCCATTTCTTTGTCCCAAAAGTTCTTTTT
TAAAACTCTTGACTTAATTTTTTTTCAGACAGGTAATTTTTTTTCATAGC
CCCCAAAATGATTCCCGGACAATTCCCCCCTGGTGAATTCCCACCCATAT
ATTTTCATATGTGTTTTTAAGTTTCGAAATCATGGACTGTAACGTTGAAG
TTTTCTTATAAAAAAGTGATTCCATTCC

Coding sequence (CDS) from alignment at sc0000157:364949..371576-

>TCONS_00012908 ID=TCONS_00012908|Name=TCONS_00012908|organism=Clytia hemisphaerica|type=CDS|length=6150bp|location=Sequence derived from alignment at sc0000157:364949..371576- (Clytia hemisphaerica)
GGAAGGCGAAGTAAACAAAAACAAAGCACCAATCCGATTTCACGCTAATA
ACCCTGCATTCAAAGCATCCACACAAAGTCAACAACAACACAACAATTAT
GAATATCAATACCCTGAAGTTGGACCTGCATCGAATGTCCATCAGAACCA
ACAACCGAGAACTACTGGATATGAGTTTGATCCTGGAGATGAAGAAAACT
CACAGTNAGAACCAACAACCGAGAACTACTGTATATGATCAGAATCAACT
ATGATACCATTCCACCACCCACCACCCAACCAACCATTCCACCTAACACT
CCATCCACAAAGCCAACAACTACTACGACAACCACACAATCAGAAACACG
CACAACGACGACAAATCCTGAACGCACGACAAATAGCAATAATATTGACC
ATTCAAAGACATTTGACACCACCAACAAACCGACGATGACGACGCGTTCT
ATCAGCGGTAGCGATACAACGACTCACGAATCTTCAACAACGACGATCGT
TATCGGCAGTTTGGTCGGCGTTGTCGTGCTTCTCAAAATCGTCATTGTTT
TGGTCATTGTTTGTTGTCTCAAGAAAAGTGGCAGAAGAATAGACCATCTG
GTGTATACAACAAGTACGAAGGCGTGTTGATTAAATACAAATTAACTTTG
ATGTGTGGTGGAAAAACGACCGAAAGATGTCTTATTTGGAAAGGCGAAGG
GAAACAGAAATCTAATTGTTCTTGTAGTGGGCAATGCTCTCAAAATTTAA
AGAAGAATTGGTACACTGACAGAATCATTACGAAGATTTCTTTAGGAGAC
TTGGACTGTTCGGGAAATCAATTTCAGGAGAGCATCTACTCATGGAATGG
TAAAAGGTTTATCCCCAGATCAACCTTTGCCGAAGATTTCACTGGAGAAT
TTCAAACAGCTAGCATTTTAAACGTCCAGATGAGGTGGTTCACAGGTGAA
CAAATTCTATGGTTACTAATTATGGTGGATTTGCAAACAGTTAGTATCCT
TGGGACTGATGAATTCATTGATGTCGAATATAGATCAAATGAAGTTGATA
AATTCAAAATGCACAACACGTCATTTGAAGAGTCAGTTTGCAAAACAAAA
TTCAACGCTAGATTAGAATATAAATGGTCAGACGGTGTAGAATGTAAGTG
TGCTGTAGGTGAAACATTTATCGCTTTGAATGGAGAAGTTCCTAAATGTC
AAGTTGAAGATATCAACAATAGAATTTTCGGGAAGGCGAAGTAAACAAAA
ACAAAGCACCAATCCGATTTCACGCTAATAACCCTGCATTCAAAGCATCC
ACACAAAGTCAACAACAACACAACAATTATGAATATCAATACCCTGAAGT
TGGACCTGCATCGAATGTCCATCAGAACCAACAACCGAGAACTACTGGAT
ATGAGTTTGATCCTGGAGATGAAGAAAACTCACAGTNAGAACCAACAACC
GAGAACTACTGTATATGATCAGAATCAACTATGATACCATTCCACCACCC
ACCACCCAACCAACCATTCCACCTAACACTCCATCCACAAAGCCAACAAC
TACTACGACAACCACACAATCAGAAACACGCACAACGACGACAAATCCTG
AACGCACGACAAATAGCAATAATATTGACCATTCAAAGACATTTGACACC
ACCAACAAACCGACGATGACGACGCGTTCTATCAGCGGTAGCGATACAAC
GACTCACGAATCTTCAACAACGACGATCGTTATCGGCAGTTTGGTCGGCG
TTGTCGTGCTTCTCAAAATCGTCATTGTTTTGGTCATTGTTTGTTGTCTC
AAGAAAAGTGGCAGAAGAATAGACCATCTGGTGTATACAACAAGTACGAA
GGCGTGTTGATTAAATACAAATTAACTTTGATGTGTGGTGGAAAAACGAC
CGAAAGATGTCTTATTTGGAAAGGCGAAGGGAAACAGAAATCTAATTGTT
CTTGTAGTGGGCAATGCTCTCAAAATTTAAAGAAGAATTGGTACACTGAC
AGAATCATTACGAAGATTTCTTTAGGAGACTTGGACTGTTCGGGAAATCA
ATTTCAGGAGAGCATCTACTCATGGAATGGTAAAAGGTTTATCCCCAGAT
CAACCTTTGCCGAAGATTTCACTGGAGAATTTCAAACAGCTAGCATTTTA
AACGTCCAGATGAGGTGGTTCACAGGTGAACAAATTCTATGGTTACTAAT
TATGGTGGATTTGCAAACAGTTAGTATCCTTGGGACTGATGAATTCATTG
ATGTCGAATATAGATCAAATGAAGTTGATAAATTCAAAATGCACAACACG
TCATTTGAAGAGTCAGTTTGCAAAACAAAATTCAACGCTAGATTAGAATA
TAAATGGTCAGACGGTGTAGAATGTAAGTGTGCTGTAGGTGAAACATTTA
TCGCTTTGAATGGAGAAGTTCCTAAATGTCAAGTTGAAGATATCAACAAT
AGAATTTTCGGGAAGGCGAAGTAAACAAAAACAAAGCACCAATCCGATTT
CACGCTAATAACCCTGCATTCAAAGCATCCACACAAAGTCAACAACAACA
CAACAATTATGAATATCAATACCCTGAAGTTGGACCTGCATCGAATGTCC
ATCAGAACCAACAACCGAGAACTACTGGATATGAGTTTGATCCTGGAGAT
GAAGAAAACTCACAGTNAGAACCAACAACCGAGAACTACTGTATATGATC
AGAATCAACTATGATACCATTCCACCACCCACCACCCAACCAACCATTCC
ACCTAACACTCCATCCACAAAGCCAACAACTACTACGACAACCACACAAT
CAGAAACACGCACAACGACGACAAATCCTGAACGCACGACAAATAGCAAT
AATATTGACCATTCAAAGACATTTGACACCACCAACAAACCGACGATGAC
GACGCGTTCTATCAGCGGTAGCGATACAACGACTCACGAATCTTCAACAA
CGACGATCGTTATCGGCAGTTTGGTCGGCGTTGTCGTGCTTCTCAAAATC
GTCATTGTTTTGGTCATTGTTTGTTGTCTCAAGAAAAGTGGCAGAAGAAT
AGACCATCTGGTGTATACAACAAGTACGAAGGCGTGTTGATTAAATACAA
ATTAACTTTGATGTGTGGTGGAAAAACGACCGAAAGATGTCTTATTTGGA
AAGGCGAAGGGAAACAGAAATCTAATTGTTCTTGTAGTGGGCAATGCTCT
CAAAATTTAAAGAAGAATTGGTACACTGACAGAATCATTACGAAGATTTC
TTTAGGAGACTTGGACTGTTCGGGAAATCAATTTCAGGAGAGCATCTACT
CATGGAATGGTAAAAGGTTTATCCCCAGATCAACCTTTGCCGAAGATTTC
ACTGGAGAATTTCAAACAGCTAGCATTTTAAACGTCCAGATGAGGTGGTT
CACAGGTGAACAAATTCTATGGTTACTAATTATGGTGGATTTGCAAACAG
TTAGTATCCTTGGGACTGATGAATTCATTGATGTCGAATATAGATCAAAT
GAAGTTGATAAATTCAAAATGCACAACACGTCATTTGAAGAGTCAGTTTG
CAAAACAAAATTCAACGCTAGATTAGAATATAAATGGTCAGACGGTGTAG
AATGTAAGTGTGCTGTAGGTGAAACATTTATCGCTTTGAATGGAGAAGTT
CCTAAATGTCAAGTTGAAGATATCAACAATAGAATTTTCGGGAAGGCGAA
GTAAACAAAAACAAAGCACCAATCCGATTTCACGCTAATAACCCTGCATT
CAAAGCATCCACACAAAGTCAACAACAACACAACAATTATGAATATCAAT
ACCCTGAAGTTGGACCTGCATCGAATGTCCATCAGAACCAACAACCGAGA
ACTACTGGATATGAGTTTGATCCTGGAGATGAAGAAAACTCACAGTNAGA
ACCAACAACCGAGAACTACTGTATATGATCAGAATCAACTATGATACCAT
TCCACCACCCACCACCCAACCAACCATTCCACCTAACACTCCATCCACAA
AGCCAACAACTACTACGACAACCACACAATCAGAAACACGCACAACGACG
ACAAATCCTGAACGCACGACAAATAGCAATAATATTGACCATTCAAAGAC
ATTTGACACCACCAACAAACCGACGATGACGACGCGTTCTATCAGCGGTA
GCGATACAACGACTCACGAATCTTCAACAACGACGATCGTTATCGGCAGT
TTGGTCGGCGTTGTCGTGCTTCTCAAAATCGTCATTGTTTTGGTCATTGT
TTGTTGTCTCAAGAAAAGTGGCAGAAGAATAGACCATCTGGTGTATACAA
CAAGTACGAAGGCGTGTTGATTAAATACAAATTAACTTTGATGTGTGGTG
GAAAAACGACCGAAAGATGTCTTATTTGGAAAGGCGAAGGGAAACAGAAA
TCTAATTGTTCTTGTAGTGGGCAATGCTCTCAAAATTTAAAGAAGAATTG
GTACACTGACAGAATCATTACGAAGATTTCTTTAGGAGACTTGGACTGTT
CGGGAAATCAATTTCAGGAGAGCATCTACTCATGGAATGGTAAAAGGTTT
ATCCCCAGATCAACCTTTGCCGAAGATTTCACTGGAGAATTTCAAACAGC
TAGCATTTTAAACGTCCAGATGAGGTGGTTCACAGGTGAACAAATTCTAT
GGTTACTAATTATGGTGGATTTGCAAACAGTTAGTATCCTTGGGACTGAT
GAATTCATTGATGTCGAATATAGATCAAATGAAGTTGATAAATTCAAAAT
GCACAACACGTCATTTGAAGAGTCAGTTTGCAAAACAAAATTCAACGCTA
GATTAGAATATAAATGGTCAGACGGTGTAGAATGTAAGTGTGCTGTAGGT
GAAACATTTATCGCTTTGAATGGAGAAGTTCCTAAATGTCAAGTTGAAGA
TATCAACAATAGAATTTTCGGGAAGGCGAAGTAAACAAAAACAAAGCACC
AATCCGATTTCACGCTAATAACCCTGCATTCAAAGCATCCACACAAAGTC
AACAACAACACAACAATTATGAATATCAATACCCTGAAGTTGGACCTGCA
TCGAATGTCCATCAGAACCAACAACCGAGAACTACTGGATATGAGTTTGA
TCCTGGAGATGAAGAAAACTCACAGTNAGAACCAACAACCGAGAACTACT
GTATATGATCAGAATCAACTATGATACCATTCCACCACCCACCACCCAAC
CAACCATTCCACCTAACACTCCATCCACAAAGCCAACAACTACTACGACA
ACCACACAATCAGAAACACGCACAACGACGACAAATCCTGAACGCACGAC
AAATAGCAATAATATTGACCATTCAAAGACATTTGACACCACCAACAAAC
CGACGATGACGACGCGTTCTATCAGCGGTAGCGATACAACGACTCACGAA
TCTTCAACAACGACGATCGTTATCGGCAGTTTGGTCGGCGTTGTCGTGCT
TCTCAAAATCGTCATTGTTTTGGTCATTGTTTGTTGTCTCAAGAAAAGTG
GCAGAAGAATAGACCATCTGGTGTATACAACAAGTACGAAGGCGTGTTGA
TTAAATACAAATTAACTTTGATGTGTGGTGGAAAAACGACCGAAAGATGT
CTTATTTGGAAAGGCGAAGGGAAACAGAAATCTAATTGTTCTTGTAGTGG
GCAATGCTCTCAAAATTTAAAGAAGAATTGGTACACTGACAGAATCATTA
CGAAGATTTCTTTAGGAGACTTGGACTGTTCGGGAAATCAATTTCAGGAG
AGCATCTACTCATGGAATGGTAAAAGGTTTATCCCCAGATCAACCTTTGC
CGAAGATTTCACTGGAGAATTTCAAACAGCTAGCATTTTAAACGTCCAGA
TGAGGTGGTTCACAGGTGAACAAATTCTATGGTTACTAATTATGGTGGAT
TTGCAAACAGTTAGTATCCTTGGGACTGATGAATTCATTGATGTCGAATA
TAGATCAAATGAAGTTGATAAATTCAAAATGCACAACACGTCATTTGAAG
AGTCAGTTTGCAAAACAAAATTCAACGCTAGATTAGAATATAAATGGTCA
GACGGTGTAGAATGTAAGTGTGCTGTAGGTGAAACATTTATCGCTTTGAA
TGGAGAAGTTCCTAAATGTCAAGTTGAAGATATCAACAATAGAATTTTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007241XLOC_007241Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012908-exon-sc0000157-1575043694:371013..371576TCONS_00012908-exon-sc0000157-1575043694:371013..371576Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1575043694:368443..368657TCONS_00012908-exon-sc0000157-1575043694:368443..368657Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1575043694:367254..367389TCONS_00012908-exon-sc0000157-1575043694:367254..367389Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1575043694:366363..366702TCONS_00012908-exon-sc0000157-1575043694:366363..366702Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1575043694:364949..365800TCONS_00012908-exon-sc0000157-1575043694:364949..365800Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1510915933:371013..371576TCONS_00012908-exon-sc0000157-1510915933:371013..371576Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1510915933:368443..368657TCONS_00012908-exon-sc0000157-1510915933:368443..368657Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1510915933:367254..367389TCONS_00012908-exon-sc0000157-1510915933:367254..367389Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1510915933:366363..366702TCONS_00012908-exon-sc0000157-1510915933:366363..366702Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1510915933:364949..365800TCONS_00012908-exon-sc0000157-1510915933:364949..365800Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1491911889:371013..371576TCONS_00012908-exon-sc0000157-1491911889:371013..371576Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1491911889:368443..368657TCONS_00012908-exon-sc0000157-1491911889:368443..368657Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1491911889:367254..367389TCONS_00012908-exon-sc0000157-1491911889:367254..367389Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1491911889:366363..366702TCONS_00012908-exon-sc0000157-1491911889:366363..366702Clytia hemisphaericaexon
TCONS_00012908-exon-sc0000157-1491911889:364949..365800TCONS_00012908-exon-sc0000157-1491911889:364949..365800Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012908-proteinTCONS_00012908-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000157supercontigsc0000157:364949..371576 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.209543	0.206236	0.236338	0.12111	0.687197	0.508312	0.137823	0.0685012	0.192835	0.248312	0.242139	0.136938	7.83594	6.84985	0.0622281	0.185183	0.829043	0.881412	17.757	15.9844	0.225096	0.233104	0.725017	0.655199	0.560273	1.05773	4.08422	3.35586	0.288223	0.171948
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012908 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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