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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012922 ID=TCONS_00012922|Name=TCONS_00012922|organism=Clytia hemisphaerica|type=transcript|length=882bp
AAGATTTTCGTCGCTTTTATAACTCAGGATTGAAACTATATAGCTGTTTC
TTTAATTTCACGTGGTACAATTTGTGATAGATTTTTATATTCAATCTGgc
gtgtgtgtgtgtgtgaaaATCACGTGGGTCAcacgttttggatgggaaac
aAATGGCTTCGCTTACACCAATAAGGTCATTAAACTCATGTTGAATGATA
AGACTTtatatctttttaaagaacgaTGTGATCACGATTGTAACAACACT
TAATCCTCTTTTACAcgatttctttataaaaacatccaaaaattttaacc
tttccagcgcgcaacatttttataTCTTCAGCCCGTCTGCGCGCaacgtt
ttttgatgaaaatgcaattttcacgatAACCGTTATAACTTTTTGANNNN
NNNggggggggggggggttggaataaaaatgtcctgcgtggaaaattttc
gaaaaactaaTTAGCGGGCTATTAGGAGTCTGAGagtaactttttgggtt
tcaagcctaaaaatgttcttataatgttcttattcTCTCCATTTTGCGAC
TATTTTTATCctgagtccgcaaagccttaaattgttcttaacttgttctt
gacattttggcaatcgaatctttatgtttttatatagtttgttcttataa
aaaaacgtgtacagcgAAAGGGTTCTTTCATTTATTAATGGTAGGGGTTT
CAAAATATCTTAGGTGTattttactttataaaaatgagaaaatatttttt
ataggatttaaatattttgtaatagATTATGCATGTATGNTTTTTGGAAA
GCCCTACCTTTCCCCTTTCTAAATATGTTTAACTGAGTACTCCAAACAAT
TTTGGACAGAAATTATGAAGCCAGACAAAAGG Run BLAST on NCBI transcript from alignment at sc0000157:116280..117161 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012922 ID=TCONS_00012922|Name=TCONS_00012922|organism=Clytia hemisphaerica|type=transcript|length=882bp|location=Sequence derived from alignment at sc0000157:116280..117161 (Clytia hemisphaerica)
CCTTTTGTCTGGCTTCATAATTTCTGTCCAAAATTGTTTGGAGTACTCAG
TTAAACATATTTAGAAAGGGGAAAGGTAGGGCTTTCCAAAAANCATACAT
GCATAATctattacaaaatatttaaatcctataaaaaatattttctcatt
tttataaagtaaaatACACCTAAGATATTTTGAAACCCCTACCATTAATA
AATGAAAGAACCCTTTcgctgtacacgtttttttataagaacaaactata
taaaaacataaagattcgattgccaaaatgtcaagaacaagttaagaaca
atttaaggctttgcggactcagGATAAAAATAGTCGCAAAATGGAGAgaa
taagaacattataagaacatttttaggcttgaaacccaaaaagttactCT
CAGACTCCTAATAGCCCGCTAAttagtttttcgaaaattttccacgcagg
acatttttattccaaccccccccccccccNNNNNNNTCAAAAAGTTATAA
CGGTTatcgtgaaaattgcattttcatcaaaaaacgttGCGCGCAGACGG
GCTGAAGAtataaaaatgttgcgcgctggaaaggttaaaatttttggatg
tttttataaagaaatcgTGTAAAAGAGGATTAAGTGTTGTTACAATCGTG
ATCACAtcgttctttaaaaagatataAAGTCTTATCATTCAACATGAGTT
TAATGACCTTATTGGTGTAAGCGAAGCCATTtgtttcccatccaaaacgt
gTGACCCACGTGATtttcacacacacacacacgcCAGATTGAATATAAAA
ATCTATCACAAATTGTACCACGTGAAATTAAAGAAACAGCTATATAGTTT
CAATCCTGAGTTATAAAAGCGACGAAAATCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012922-exon-sc0000157-1491911889:116280..117161 | TCONS_00012922-exon-sc0000157-1491911889:116280..117161 | Clytia hemisphaerica | exon |
| TCONS_00012922-exon-sc0000157-1510915933:116280..117161 | TCONS_00012922-exon-sc0000157-1510915933:116280..117161 | Clytia hemisphaerica | exon |
| TCONS_00012922-exon-sc0000157-1575043694:116280..117161 | TCONS_00012922-exon-sc0000157-1575043694:116280..117161 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000157 | supercontig | sc0000157:116280..117161 . |
Blast
The following BLAST results are available for this feature:
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