TCONS_00012982 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012982
Unique NameTCONS_00012982
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1369

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012982 ID=TCONS_00012982|Name=TCONS_00012982|organism=Clytia hemisphaerica|type=transcript|length=1369bp
gTTGAGGAGAGTGAACAAGAGAGCGAACAAGAGGAGAATGAGAGTGAAGA
TGAAGTTGAAAACAAAGaaGAAGATGCAGAGGAAGAGAATGATGTTTCAA
GTGCAAGTGAGAATCATTCCTCACTTCAAGATGGTATCGTTCCACAACAG
TCTTTCCTACAGTTAACACAGCAGGAGAAAGCTGGGATGCAAGAGCTGAT
GAAAGCTATGCAAGTAGAAAATGACAAAGCTTCAAGTTCAAGTCGGAGTT
CGAGTGGATCCAGTAGTAAAAAGAGCAAAACTAAAGGTACACCAAAATTC
GAGGAAAAGAAAGCACACGGGAAAATTAACTTTGTAGCAGCCAGCAAGAA
ACAGATGAGTGACAAAGTGGCACAGAAAACCAAGAAGAGGGGAGAGGAAT
TACTTGGTCTTGTGCAGTTAGACGTACGTTCCATCGACTTGTTTGATATG
CCACCCATGACTGAATATGAACTCTACATGAAAAGGTTCGGAAGCTCCGA
TAGTCGACAGATGTACACACAGACGAATGAGGAGAATTTCGATCAAGAAT
GTCAAACGGATGATATTGAGACTGAAACAAGATGGTGCCAACATTCCTCA
GATTCGAAATCAGCTGGAACACAAAAATCGTCAGGAGACTCTACATTGGA
AAATTCGAATGCCTTTTTCAATAATACTGATTCTGTACGACTCAACAAGT
TTCTTCTGAAAGCCTCAAAGGTGTGTTTGTCCTTGTTGGAGGAGATAGCG
GCTGGCATTGAACAACCAAGAAAGCATTATGTTGAAACACGAAGTAATTT
GAGTGAAGGATATGTGTCACTGGGATCTTCAGAATTCTTAGTGTTAGGTC
GTGACGTTTGTGACATCAAATATTCACCGAGTCAAACCAATATGTTGTTG
ACCGCCCATGGAACCAGTAATGTCGTGcAAAAAGGTTTAAAATCATCCAA
AGGACTGCTATGCGTTTGGAACACGAATGACCCAAACAAACCAACAAGAT
TGTTGGTATGCGAATCAGTACCGAAGAGTTGTTGTTTTGGTGGAGTGAAC
ACTGCTTATGCTATCGCTGGCATGGAAGACGGCGTGATAGCAATATGGGA
TTTAACAGAACCGACTTGTTATCACGAAGCTGCACAGATTGGAAACCATA
TGTTGACCTTCCAAAATGTCACTTTTACTACAGCTGCATTGGAAGTCAAA
CACATTTTTCCGGTCGTTGCAATTACACCTTTAACCTTTTATTCTGGGTA
AGCGAATTtgcagttgactctctctaattcgatcttcaagggaccaaaaa
gTATCTTCAAATAAGGGAAAGATTctaattacagagagtaatttaaatca
ctttccagctgaggggacc
Run BLAST on NCBI

transcript from alignment at sc0000161:338878..352219+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012982 ID=TCONS_00012982|Name=TCONS_00012982|organism=Clytia hemisphaerica|type=transcript|length=13342bp|location=Sequence derived from alignment at sc0000161:338878..352219+ (Clytia hemisphaerica)
gTTGAGGAGAGTGAACAAGAGAGCGAACAAGAGGAGAATGAGAGTGAAGA
TGAAGTTGAAAACAAAGGTAAGAGAACTTAGATGATTACAAAGATGATGA
TTTTGAAAGTGATGTTGAAGAGAGTGAACAAGAGAGCGAACAAGAGGAGA
ATGAGAGTGAATATGAAGTTGAAAACAAAGGTAAGAGAACTTGATGATTA
CAAAGATGATGAATTTGAAAGTGATGTTGAGGAGAGTGAACAAGAGAGCG
AAGAAGAGGAGAATGAGAGTGAAAATGAAGTTAAAAACAAAGGTAAGAGA
ACTTTGATGATTACAAAGATGATGATTTTGAAAGTGATGTTGAGGAGAGT
GAACAAGAGAGCGAAGAAGAGGAGAATGAGAGTGAAAATGAAGTTGAAAA
CAAAGGTAAGAGAACTTTGATGATTACAAAAGATGATGATTTTGAAAGTG
ATGTTGAGGAGAGTGAACAAGAGAGCGAACAAGAGGAGAATGAGAGTGAA
TATGAAGTTGAAATCAAAGGTAAGAGAACTTGATGATTACAAAGATGATG
ATTTTGAAAGTGATGTTGAGGAGAGTGAACAAGAGAGCGAACACGAGGAG
AATGAGAGGAGAATGAGAGTGAAGATGAAGTTGAAAACAAAGGTAAGAGA
ACTTTGATGATTACAAAGATGATGATTTTGAAAGTGATGTTGAGGAGAGT
GAACAAGAGGAGAATGAGAGTGAAGATGAAGTTGAAAACAAAGGTAAGAG
AACTTTGATGATTACAAAGATGATGATTTTGAAAGTGATGTTGAGGAGAG
TGAATAAGAGAGCGAACAAGAGGAGAATGAGAGTGAAGTTGAAGTTGAAA
ACAAAGGTAAGAAGAACTTGATGATTACGAAGATGGTGATTTTGAAAGTG
ATGTTGAGGAGAGTGAACAAGAGAGCGAACAAGAGGAGAATGAGAGCgaa
gttgaaattgaaaataacgGTAAGAGACACTTGACAATGGTGACTTTTAG
AATTGATTATTCTCTCTTTTCGTTACTGTAGTAGAGTCAAGTAGTATcca
atgaaattttgatttgtaTAACACCCTTCCTCTCTTGGATCTTATGGAAA
ATATGTAGTACTCTCTTCTTCTTGTATTTCTCTGCACAATTAAGAGTGCT
CATTACTTGAGTAGAGCTTTTCACTTAAAGATAGTTACTCTCTTCAATAT
CTCATGTGTTGAAATTGGAAAGGTCGTTGGGTGTTTAATGctcatttttt
tatgtttttaagaaGAAGATGCAGAGGAAGAGAATGATGTTTCAAGTGCA
AGTGAGAATCATTCCTCACTTCAAGATGGTATCGTTCCACAACAGTCTTT
CCTACAGTTAACACAGCAGgtatatttcatttcatttttatttgaacTTA
AATAATCCGTACTAGTAAAGTTAggaccaaataaaaataaccaTTTGGTT
AAAAATGTACTAGGTAAAGGTCGAACACTTTTAGTGTAAAGATCATAGTT
AGTTGACTTTGACAGCCACTAATTATTTTACTATATTTTTTAGGAGAAAG
CTGGGATGCAAGAGGTAGGGTTTGTGCAAAGCTTCCTAAATTTACTTAAC
TCTTAAATTTACTGTAActctaaatttgaaatttaactgAATATTTATCT
AATCTAGTAAAGTATCCAGAAATATCAGCTTTGAAAGAAGGGCCGTTCTC
CAAAACTCTGATTAGCTACGCAAAATTCCTAATTTTTCAAACACGTACTT
CACTTTTAGTTTTGAGCATGTTATGTTAATTAAGTCTACCTGCCACCTTA
CCCAccgaaagtgaaatttttttgtaattgaaAAACCATGAATTTTCAAT
CATTCATTCCATTTAGCTGATGAAAGCTATGCAAGTAGAAAATGACAAAG
CTTCAAGTTCAAGTCGGGTATAAATTCCTTCCCATACCCTTATTACCCTC
CTCTTCCTAACTTTTAGGTAAATTCTCTTTTGTATTTTCAACTTACTTCC
CAAAAAGCCCCTACCTCATgattaagaaaaaaacattttcccttTCGAAA
TTTTCCCTTTACTCATAGTAAGATAGAATTTTCCATTTCCCCTTAAACCT
GCTTAAACCTACCTTCGGCGACCCGTTTCGTGACTCTTAGAGCAATTTGA
ATTTAAAGccagaacttttttttcattttttataccTTTTTTCAGAGTTC
GAGTGGATCCAGTAGTAAAAAGAGCAAAACTAAAGGTATGCAAATCTTTA
CcatttattttgtaaataaGGTTCCGTTCACATATCGATTTTTCTCACCA
CTAACGTCATTCCGTCCAAACATTTCAAACTTttattaaccctttgagtg
ccagggtccttttttctaagttttttttaaaaaatcgctagttcaaactt
taagggcttatatctgcTGATCTataaggaattagaagctcgtatatagc
tcgttggatagcttagagtctcttctttcttttgggcgccttcggcgccN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNcaaaaataacgatttctaactcaaact
gggcattacaggagggcttcgccctcctatatagcccatgtcgtatatat
acgacatcggcacttaaagggttaaagccACTGAGCATTGCGGAGCATGG
TACTGGTGGTGTGATGAGAGTTTGCTTGAACTAGTCATGCGGATTGAATT
TTTGTTCAAGTGAAGCGATATTAAAATCATCCCCGAAAATCGatgttttt
gatggattttcttAGCGTTACTGCCTCTGACTCCCACCCCCTCGCGTCAT
TGTGGCAGGAAACATCGATATTTGATTGGCtcctaatttttttacatttt
tctccaCTCCTCTCGACATCAATGCGATAACATGATACTTTTCAAACCAG
GGATTGATacttaaaattagttttttaatgACTTAACTAGGTACACCAAA
ATTCGAGGAAAAGAAAGCACACGGGAAAATTAACTTTGTAGCAGCCAGCA
AGAAACAGATGAGTGACAAAGTGGCACAGAAAACCAAGAAGAGGGGAGAG
GTACGTGTCCTTAAATTCCATTTAAACCTACCATGCTTCCTCGTGTTTTT
TGGCGAATATTTACCTTTAAcgcgaaaataaaactcgcgaaatcgcGTTG
GATTGCTGACTTGAAATAAATTTCAGAGATCAGAGTTCCTGCTTGAAATA
GCCTGTAAATTGGCGTCTTTAGGTCCATTTGCGACTGATTTTAAGCTGAT
TCGGGGAATTAAGATACACCTTTCCCAAATTGTTTGCTATTTTTCGAAGG
TCTTCAAACCATATTGTAAACTATATATTTGTATTCCTCCTATAAAGACA
AGTGCatgctgaaaatttgagctcaaaagcttttttctatcaatttttat
AACTGTTTTTGTTCACAGTGAAATcccttataaaaattaaaacagactgc
ccggcctcgtttccatgtaattctattgtttttaaagaaatttcaattca
aaataactcaagaaccggaagtgcttttttcatatttctttttttatttg
tttagtttTGCGACATACAgtacaattttatgaaactaaatggaaacatc
aaaacattaaaacaaaaaagtcaaaaagcctaaataacaattcgggaaag
gtgtattgatttgcgaaaataaatctaaaaaaattcGCTACTAATTTGGC
TTGCAAAATTAAATCTCGCAAAATTAATCCTAGTAAAGTGTATGTTTTAT
TAAAAGAGGTATTACTTAAAAGGGGTATTTGTATTGAAATACAGTTTTCA
CTACTAAACTCCTCTCTATaattacagtggagtctccataattcgaacat
gCACGGGgagcacaaatttgttcgagttaaggaaatttcgagctaTTTAG
GAACGTTTTTGTAAGGCAGTGTTAACTGATGGGACCatgaaacttgttcg
agttaaggaaatttcgagctaTTTAGGAACGTTTTTGTAAGGCAGTGTTA
ACTGATGGGACCatgaaacttgttcgagttaaggagacattggagttgta
gaggttcgagttaaagagactctctGCACGTGTGTTTCTATTGTCCATTT
CctttctatgtttttttttccattagGAATTACTTGGTCTTGTGCAGTTA
GACGTACGTTCCATCGACTTGTTTGATATGCCACCCATGACTGAATATGA
ACTCTACATGAAAAGGTTCGGAAGCTCCGATAGTCGACAGGTAATCCatc
ataaaattattttagagGAAAAAACGTATATCGTGGCTCTTGCAGAAAAT
ATCCATAGCAAAAAAATCCTTACAATCTAGAATGTGGAGAAGTTCCCGAT
ACcaccttttgttttgaaaaattcctgagaacattttaggctgaggGAGA
AAATATAAAGAGCATAATAGTAAGAACATGGCCAGCCTGAGAATTGAAGA
ACATAACTATTTGAATTCATAagactttttcataattgcAGTAATTCTTT
TACTTCTCAACTTGAAATCAGAGCATATTTGTTCGACTAGAGGGCGTATA
TTTTAACCCAAGGTAATTCTGTATATTTAAGTGTATTACTATGCAGGACG
CCAATAACAACATTTTAAGcttcaaatttattttcgaaaaatataaagCA
TATCCAGCCCATACTAATACGTTCTGATAAAAACAATGTGTATCATCAAA
CTATCGATGTACATTTTGTGACCCGTTCTTTAATGGAACAACCTAActca
gctggcacacgacgttgttttaacgttcaaataacgttatttggacgtta
tgaatgtcacatggacgttgttttgacgttgtgtgccatctGGGAAGGTT
CGGATATCAATTGGAAAATTATGCAAAGAAAAACTCTCCCCTTgtgaaat
tttttagaaaaaaaacacgGCTATTAGGGCAgggttttcttattattttg
atttaagTTAAATACTAATTTTGAAGTCTTAAATAATCATTTTATAGATG
TACACACAGACGAATGAGGAGAATTTCGATCAAGAATGTCAAACGGATGA
TATTGAGACTGAAACAAGATGGTGCCAACATTCCTCAGATTCGAAATCAG
GTATGTCATATCAGATTATTGTCCTATAAGATTTTAAGTCGACTGGCTGC
AATCAAGTCATGAAAAAAGCAAGGAAATGTTAGTTAGGGATATTGATGCA
TCTATTCTAAGCAATTTGTCTAACACATTTTTTAGCCATTTCTCATCTCA
AAAGATGTAGTGGAAAGGGACGAAAACATGAAAGGGGCGATGAAAAGTTC
CAATGGCTTTTTCAACGAGGCTAGTTTTTGTACGTCGGCCTTTCCTGGGG
AtgtgctggagtttttataagatagtTTTATATTAATTGGTATTTAAAGT
AAAAGAGATGACGGgtttttcagaaaaagtaacaaaattgtctTACTAca
gttaacgaccaaccaaatcaaaaatgagcttgtaaaaactccagcttgtc
ccNGGTTAACGACGTCAACCAAATCAAAAatgagcttgtaaaaactccag
catgtCCCTCCCCGTTCTAGCTGATTGCAAGAAACATTTAGATTGTTCGA
TTACTTTTAAACAACTGTTTAATCGACTGTTTCAAACAAATGTTTCAAAG
CTGCATTATGTCACTAAACacattttctgaattttcattCTGCGCATACT
CTTTGCAAAACAACAAGTAAAAAAGATACCAAAACTGTTTCTATCGTAcc
ataattttcaatttaaagtaACAGAGAAAATCATTTCGGTATGGTGTTCA
ACTGGTTGTAATGCTGGTTGCTCACCTAATTAATGTAtagataaaattga
aatttctataaAGATGTTCTGTATATAGATACAAAATGTACATAGATGTC
TCAGTGTTGTctgtattttttgtttaaagttaTTACTAACCGCCGCATAC
TTTATAGACCTTATCAGAGTTCAGACCTTTCGAATGGTATAATATATCGA
ATGGGGTTACTGATATTAAATTTACTGTTATCAACATTTTAGGGCTCAGA
GCTCTCCCTGAAAAACCGGGAAAAcggaaaattttgataaattataCTAC
TGTGCAAAAATTCTGAAACTCTTCACAAAATAGTCTGATTTACTCAACCA
TCACAACCCCACTATTTTAGGTCTAAACagatttaattcaaatttaGTAT
AGAGGTAATTTAACCCTCCTGATCTTCTGATCTTTACTTCATAAATGTTT
TTCCATAACATGTATGTATTAAGTAAGTTAAAGCCTCTAGAAGTTGCATC
TTTGAAAAataccaaataaaaaaaaaatacctttaaaaccaaagaaagaa
ctagtgcaaaaaaaaaagtaccTATTTCCGACCAATACTTGCTTTTGAGG
GATTCCAGatgtaataaatcaaagtaGAAAAGAAACTTCTATAATCAGCT
TTGAGGAACTTATTGAGCTAAGCAAATGCAGATCAATTCTAAGTTGGAAA
ATCTAATTAGTTTAATCTTTAAGAATGCTTCGATTACTCATTACCACCTG
ACGAGACGATGCTTTGTCAGCTAATTGTATAACATTTCTAAGAATCCCAA
ATTAAGAGAGGACAAGGAATTATAAAACTGTACGGTAGATTCTTAAAGGG
AATCTTTGAACCTTTTACATTGTAGGGTGTACAAAATACTTAGTTTATAC
AGACAAGGCTCTTTAAATGCATCGTATTTTTCGAATATGTAATTTGCCAT
ACACTACCTAAtttagcaagctagacgactgaTTCAGGCTTAGTAGAAAT
AAattaatggagggaacaaattttagtttaaaCAAACTAATCCCGGAaca
taatcgtattatcataaaAGTACTATAACTATATTATACTGTATTATACG
CATTatgaacgactccagtctatataCCATACTATTACGTATTATTCTTG
TATAcgattctttataaaaacaaactgtataaAAACATCAGACTTTAAGA
TCAAACCAAAGTCTAACAATgtttaaaaacatccaaagagtTGAGAACat
gcttcaaatccaaaaatcccccaaaaaaagattaaaaaagatTAAAGCTT
GTCTGTCACATTTACGGTAACGGTCGTTTTTGATTACTTTTACGGAAAGT
CACGAGAAAGAGGGagaaaacttcaaaatgtactttcgcgggcagaaact
ttcgcgtttttcgcgtttttggcattttttcgcgaaagtttctgccaggt
aagaaattaaacaagaaatcCGCGAAAGTTAATtctgcaaaaaatgaaat
tttcctaaaagttttaaaagccgaGGAGAGTCAATATTATCGGTATTATC
GCAGTGACTAGGATTGGGAATGGGAGGAAAGAAGtgcaaatagtttattt
ttcatttataagcATGTCACTCTTccgattgaagaaaaaattgagatttg
aaataattttttattcatcatgaatattgcccttatgtattacaatgaag
tgaatacagtcgctctcatgttgtcttctgaacagccaccagaaccgttg
gaaaaccaacgaaTCCGGCGAGGCTTGAACTCGCAACCATGCCATTCGAg
ggcatttgctctaccattgagctacgAGGATATTCAATTGCCACTCGGTA
GAgctggaagtgaattcttgtctactgactGGTCAGAGACGGTGAATTGG
GAGAAATCCATCTCCACATTGCTAGTGTGTTGGAATCCACCAACTACTAC
ACTAACGGAAGGTTTGGGCATAcatggttttccaacggttctggtggctg
gtcagaagacaacacgagagcgactgtattcacttcattataatttttta
ttcactttccctagccactcgcgaaagttattgctactaaaattgaacat
tcataaaaaaccgcgaaagtttcttacgtaaattttcttcaaaaagtaaa
aatcgcgaaacGATTTAAATCCTTAAAGACTTTTCggtctcgcgaaagtt
tctacccgcgaaagtttctgcccttaaagtatcaTCTCCAtattcctttt
ttataagaatcgatATAAATTACTATGTCCTGTATTCAATAATTCACAAC
AAGTCTACAGATCTCTTTAATAgattagttttgatttattttcaactttt
tctattcCTCTATAGTATTACTATGGAAACTCGATAGATATTGATCAATA
TCAAATCTACGCAGCTTGAACCACAAGGAAAAATCTATGCAAAACTGTCA
CAGCCATATCAATCAATGAAACTTTTTCAATATTAGAAATATCCATTAAC
GACAAGTGCATTGTTCACTTATTATGTATGGGCGCCCTCCCAGGCGTACT
TCTATGAGTACGCCAGTGGAGGGGCGCCCGTCTTGGTGTCCTTTTGAAAT
GTGACTCAAGGTTTGGAAAGAATTACAATCCCGATTACAATAAAATGCAA
AGTTGTGTTAATTCTGTTAACAAGTAGTGAAAATGGAAACATGCATTCCT
TTCGCTAGCCTACacgttttctataagaacatccaaaatttttgaaacct
aaaaatgttcataacacgttcttattttcgctattttgtgagtatttttg
tccatcttCAAGAAATTGGCCGTTTTAgagtgttcttaacttgttcttaa
tacttttttactgaagccttatgttcttatacaatttgttcttattaaaa
aaacgtgtacctatGTTAAAAATCTTATAAAACCAAAGTCTGTAGATGCT
tgttatatatattatatacagGTTTACAGGTTCATTATTAGGTGTTTTAA
ATGATAATACGAGCATTATGGCCCTCCAGTTTCCGTTATCGTAACCAATT
TGATCAAAACTTTTGTCTAGCATGCTTTAAATCTGTGGTTTGCTGCTCAA
AGTTTTTATGAATTAACTTACActcttctttttataagaaccagtaaaat
tttgatgagactCGATTCCTTttactttgagcctcaaattgttcctATAT
CCCTgttcttaaattattcttattttcggcatttttgaGCGCAATTGCTC
TTAtagaaaattgtgtttttggaTTACACTTTGTTTTTATGAGGAATCTA
AAACACACATCGCTGAAAAACACCGTAATACTATACCTCTTCATATAAGA
TATGTTGAACTTTCAAGCATTTGTTTTCATTCCGTGTACAGTATTTGTCC
TTTCAATTAATCTTTACACTTTCTTATCTCATAGCTGGAACACAAAAATC
GTCAGGAGACTCTACATTGGAAAATTCGAATGCCTTTTTCAATAATACTG
ATTCTGTACGACTCAACAAGTTTCTTCTGAAAGCCTCAAAGGTGCGTAGC
TTTTATGAGGAATTAGAGTGTTTTAGAAGTATGAAGCGGAGGGATATTGG
GTTTCCCTAGGTCGAATAAAATAGCAAGCCGTCCTCCCGCCAAGTAGCGc
caaaaaaagcattttttcacAGTCTCCTCTAAAACAACAATACAAGGGAA
AACAATCTTTTCTCGCTTCTTGTTAGAAATTTAAACCGTCAAACCAAGAA
GACACCATCCAAGAGGACGCCGTCGATTTTGAGCGTCACGCATTACTTTC
CTAAAACACCCTATTTAAAATTAGAAgctaaaaatatcattttacgACGA
GcggataatttttttcattcattttccaTAGATTCGGGTTTTAGTAGCTT
GGTAGTAATTTTTCTACTTATGTTATTCGACTTACTATTGGTGTACCTAA
TTGAAGGGGCAATCCTTTTCAACAATGAGGCACAAAGAAGCAGTTATCTA
GCGTATGCTGAAAGTTTCCGTATCTAAAACTATCAACCGTAGCACCGAAA
TGGTTCTCGGTTAAGGTCTAACAGCACTGAATGACTGATCGCCTTATTGG
CGAGTCCGTCAATTCAGCGACTTCATTTGACCCTGTTAAATTCGAACCCA
ATTCccttgtattcatgatatgcaccactgcagagtcttccaataatttt
tacaattttccacctaatacgtcactttttctattctttaagtgacgtat
tgggtggaaaattttaaaaattctcagaagactctctgcatatcatgaat
acgtccttttaaaatcatattttcaattCAGGTGTGTTTGTCCTTGTTGG
AGGAGATAGCGGCTGGCATTGAACAACCAAGAAAGCATTATGTTGAAACA
CGAAGTAATTTGAGTGAAGGATATGTGTCACTGGGATCTTCAGAATTCTT
AGTGTTAGGTtagtatttaatttttgctaGAAAAAAGCTACTTCTCAATT
AAATTTCCTCTTAGTTTGGCATTCGATCCCTCTGATTGGTTTTTGTAAAC
TTCTTAGCAAGAATATCATAGCGACATAAATTGTTgagcaaaaaaatctt
ttgatattGAAACTGTTGTTCATGTTCAGGCACATGAATCAAAATTTCTG
TGTTCTTCTTTAGGTCGTGACGTTTGTGACATCAAATATTCACCGAGTCA
AACCAATATGTTGTTGACCGCCCATGGAACCAGTAATGTCGTGGTATGTA
TCATGTTCAATTGAATTTCAGTTTATTCTGaaattttataccaaaaatgt
gggttttaaaaaggatttttaatCTTAGTTTCGTATAACCGGGAGGTcga
ataattgaaaaattttcccgtCCGATTTTCAATTTACTTAATTTTAATGG
GATGGACTTTTCTGAAGTAATTGGGGTATTGTGGTTTAGATGAGCCTAAC
AAACACAAAGaacttttactttttgaagacaGAATACAGACTTTTTTGTT
AACAGAATCCCAGGATCCTCCTGGCAATTCTCTGGaccgatgaattttca
atgATTTCTCGCCTACTTTGTtaactacttttttttatttcacagcAAAA
AGGTTTAAAATCATCCAAAGGACTGCTATGCGTTTGGAACACGAATGACC
CAAACAAACCAACAAGGTATATAATATGCTCCATTGACAATAAAGATTTC
TACTTTAAATCAATCGTTTTTTGTCCTTCTTTTCTTGTACCTATTTTTGA
GGAAAGCCATCTCTAGGTCTTCTGATATCGTTTAGATAACCCTAAAATTA
GATTGTGTGCTGAATCTTATACCAGTCATGGAATTGTGTAACTCCAGATG
CGCCAAGTCAAATTAACCGTAATATCTTATTCGATTTTGAATTTGCATCT
CAGATTGTTGGTATGCGAATCAGTACCGAAGAGTTGTTGTTTTGGTGGAG
TGAACACTGCTTATGCTATCGCTGGCATGGTAGGAAGCAACCAATCTTTT
ATATATTCTTTATTATAATATAGAAAGGAGGCGCACCTCTATCCTGACAA
AGCAgagtaaaaaaaagaatttctcaaaatttaaacTCGCGCGGCGCAAA
GTACTGGAGTGGGagaaaagaatttctcaaaatttgtaaGCAAATGGCAC
GAGACGTTAATAAATGATGTCCTTTAAGTAAATGAAGCGTAAATTTCCCT
CGAATGATTTTCTACCCTCGAGTGTGTTTTTTAGTAATGCAAGCTAGCTT
CAAACGCAAAAACCTTAACTCCATTNGAGTGTGTTTTTTAGTAATGAAAG
CTAGCTTCAAACGCAAAAACCTTAACTCCATTTGACAACGTGGGCAGAAA
CCAGCTAAattattgataaaatattttaccaCTTTACTACAGGAAGACGG
CGTGATAGCAATATGGGATTTAACAGAACCGACTTGTTATCACGAAGCTG
CACAGATTGGAAACCATATGTTGACCTTCCAAAATGTCACTTTTACTACA
GGTATCGAATTTTTCTTGAAAGCCGATTTTCATTCTTACGCTGAAGTCTT
GGAGAATCTCGAATAGGAAAAGCTTAATGTCTGATGTTTTCGGAGCAGCC
GATTCCGGTTCCGGTATTCGGATTAAAAAAGATCGGTATTTTCTCAAAAC
TAAACTGCAACTCGGTATTTAGCGATGAGATATTATTTCTTGCATCCTAC
CCCGGTTTGCACTCTTTCTTATTGGTATTATGTCGATATTGAACGGTTTT
TAACAGTGTCAGTGTTATGGTACATTAGCACACTCGGAAGCCCTCCTCCA
CTTTTTGTTGTGTTCTGTAGACCATTTAATCATTATTGATTGTTCTTCCT
TTATAGCTGCATTGGAAGTCAAACACATTTTTCCGGTCGTTGCAATTACA
CCTTTAACCTTTTATTCTGGGTAAGCGAATTtgcagttgactctctctaa
ttcgatcttcaagggaccaaaaagTATCTTCAAATAAGGGAAAGATTcta
attacagagagtaatttaaatcactttccagctgaggggacc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007278XLOC_007278Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012982-exon-sc0000161-1491911889:338878..338944TCONS_00012982-exon-sc0000161-1491911889:338878..338944Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:338878..338944TCONS_00012982-exon-sc0000161-1510915933:338878..338944Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:338878..338944TCONS_00012982-exon-sc0000161-1575043694:338878..338944Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:340140..340246TCONS_00012982-exon-sc0000161-1491911889:340140..340246Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:340140..340246TCONS_00012982-exon-sc0000161-1510915933:340140..340246Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:340140..340246TCONS_00012982-exon-sc0000161-1575043694:340140..340246Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:340421..340441TCONS_00012982-exon-sc0000161-1491911889:340421..340441Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:340421..340441TCONS_00012982-exon-sc0000161-1510915933:340421..340441Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:340421..340441TCONS_00012982-exon-sc0000161-1575043694:340421..340441Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:340744..340794TCONS_00012982-exon-sc0000161-1491911889:340744..340794Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:340744..340794TCONS_00012982-exon-sc0000161-1510915933:340744..340794Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:340744..340794TCONS_00012982-exon-sc0000161-1575043694:340744..340794Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:341073..341112TCONS_00012982-exon-sc0000161-1491911889:341073..341112Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:341073..341112TCONS_00012982-exon-sc0000161-1510915933:341073..341112Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:341073..341112TCONS_00012982-exon-sc0000161-1575043694:341073..341112Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:342818..342927TCONS_00012982-exon-sc0000161-1491911889:342818..342927Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:342818..342927TCONS_00012982-exon-sc0000161-1510915933:342818..342927Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:342818..342927TCONS_00012982-exon-sc0000161-1575043694:342818..342927Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:344004..344117TCONS_00012982-exon-sc0000161-1491911889:344004..344117Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:344004..344117TCONS_00012982-exon-sc0000161-1510915933:344004..344117Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:344004..344117TCONS_00012982-exon-sc0000161-1575043694:344004..344117Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:344875..344977TCONS_00012982-exon-sc0000161-1491911889:344875..344977Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:344875..344977TCONS_00012982-exon-sc0000161-1510915933:344875..344977Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:344875..344977TCONS_00012982-exon-sc0000161-1575043694:344875..344977Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:349112..349218TCONS_00012982-exon-sc0000161-1491911889:349112..349218Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:349112..349218TCONS_00012982-exon-sc0000161-1510915933:349112..349218Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:349112..349218TCONS_00012982-exon-sc0000161-1575043694:349112..349218Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:350009..350135TCONS_00012982-exon-sc0000161-1491911889:350009..350135Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:350009..350135TCONS_00012982-exon-sc0000161-1510915933:350009..350135Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:350009..350135TCONS_00012982-exon-sc0000161-1575043694:350009..350135Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:350341..350420TCONS_00012982-exon-sc0000161-1491911889:350341..350420Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:350341..350420TCONS_00012982-exon-sc0000161-1510915933:350341..350420Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:350341..350420TCONS_00012982-exon-sc0000161-1575043694:350341..350420Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:350773..350843TCONS_00012982-exon-sc0000161-1491911889:350773..350843Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:350773..350843TCONS_00012982-exon-sc0000161-1510915933:350773..350843Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:350773..350843TCONS_00012982-exon-sc0000161-1575043694:350773..350843Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:351081..351156TCONS_00012982-exon-sc0000161-1491911889:351081..351156Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:351081..351156TCONS_00012982-exon-sc0000161-1510915933:351081..351156Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:351081..351156TCONS_00012982-exon-sc0000161-1575043694:351081..351156Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:351570..351678TCONS_00012982-exon-sc0000161-1491911889:351570..351678Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:351570..351678TCONS_00012982-exon-sc0000161-1510915933:351570..351678Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:351570..351678TCONS_00012982-exon-sc0000161-1575043694:351570..351678Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1491911889:352034..352219TCONS_00012982-exon-sc0000161-1491911889:352034..352219Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1510915933:352034..352219TCONS_00012982-exon-sc0000161-1510915933:352034..352219Clytia hemisphaericaexon
TCONS_00012982-exon-sc0000161-1575043694:352034..352219TCONS_00012982-exon-sc0000161-1575043694:352034..352219Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000161supercontigsc0000161:338878..352219 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.17454	2.74397	1.69279	2.07536	0.398329	0.700666	0	0	0.318676	5.00113	3.10868	2.65851	1.30784	1.24581	1.25417	1.49341	1.17589	1.06138	1.8268	0.414537	0.789681	0.437035	1.59532	2.79483	0	0	1.31157	1.13928	0	0.776014
Blast
[Close]
BLAST of TCONS_00012982 vs. Swiss-Prot (Human)
Match: WDR60 (WD repeat-containing protein 60 OS=Homo sapiens GN=WDR60 PE=1 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 5.725e-42
Identity = 98/309 (31.72%), Postives = 154/309 (49.84%), Query Frame = 1 
Query:  325 INFVAASKKQMSDKVAQKTKKRGEELLGLVQLDVR-SIDLFDMPPMTEYELYMKRFGSSDSRQMYTQTNEENFDQECQTDDIETETRWCQHSSDSKSAGTQKSSGDSTLENSNAF-FNNTDSVRLNKFLLKASKVCLSLLEEIAAGIEQPRKHYVETRS-NLSEGYVSLGSSEFLVLGRDVCDIKYSPSQTNMLLTAHGTSNVVQKGLKSSKGLLCVWNTNDPNKPTRLLVCESVPKSCCFGGVNTAYAIAGMEDGVIAIWDLTEPTCYHEAAQIGNHMLTFQNVTFTTAAL--EVKHIFPVVAITPLT 1236
            ++F +AS +Q S   A K K R  +LL L+ LD   +  L D+PP+ EY++Y++ FG  +++Q Y Q NE+N +++ QT++IET   W QH  +S    T  S G    + S+A      D+ RL  FL  A +V   LLEE     E       + R+   S+    L +S   +  R V  +  S  Q  M+++ H         L  SK +LCVW+   P+ P ++L+CES    CC   +      AG   G + +WDL E +  H +  + +   TF+  TF+T  +   V H  P+ A+ P++
Sbjct:  468 VDFASASHRQKSRTQALKQKMRSTKLLRLIDLDFSFTFSLLDLPPVNEYDMYIRNFGKKNTKQAYVQCNEDNVERDIQTEEIETREVWTQHPGES----TVVSGGSEQRDTSDAVVMPKIDTPRLCSFLRAACQVMAVLLEEDRLAAEPSWNLRAQDRALYFSDSSSQLNTSLPFLQNRKVSSLHTSRVQRQMVVSVHDLPEKSFVPLLDSKYVLCVWDIWQPSGPQKVLICESQVTCCCLSPLKAFLLFAGTAHGSVVVWDLREDSRLHYSVTLSDGFWTFRTATFSTDGILTSVNHRSPLQAVEPIS 772
The following BLAST results are available for this feature:
BLAST of TCONS_00012982 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR605.725e-4231.72WD repeat-containing protein 60 OS=Homo sapiens GN... [more]
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