TCONS_00013040 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013040
Unique NameTCONS_00013040
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2223

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013040 ID=TCONS_00013040|Name=TCONS_00013040|organism=Clytia hemisphaerica|type=transcript|length=2223bp
TATAAACACAAGAacataaattaattaaaatggaaatgcaaaaacaaagc
aaagcaATTCTGTTACTAGAAGCCTTCTACGGCGGCTCGCATAAACAGTT
GATTGATTACCTGAGAGAAATGCTTATCCGTAAAGGTCATGCATGCGATT
GTATAACGATGTCGGATAAGAAATGGCATTGGCGCATGCGTACTAGTTCG
ATGTTCTTTGCACAGGAGTTGAATCACAAAATGGAGGAAGGCAAGAATCT
TTCTTACGATATTCACAAGTGCAGTGGTCAACTTAGCTGAGCTGGTTGGA
TTATGTCCTGTTATAAGAAACGCAcgaaaagttttatattttcacgAAAA
CCAACTCATTTATCCTGTTCGAAAACAACAAGATCGGGATTTTCAATATG
GGTACAATCAAGTTGTATCTTGTCTAATTGCTGATGTTGTGTTATTCAAT
TCGGAATTCAACAAACAATCGTTCCTGAACAACATCAAGCCCTATATGAA
GACCATGCCAGATTATCGACCATCCAACCAAGTGAGAGATAAGATTGCAT
CCAAATGTCATGTTCTTTACTACATCTTTAGAAGCCCAGTATTGGGTTCT
GAAAGCCCGACGCCGGCGAAGTTGCGAATATTAGATGAAGAAACGACTTC
AAACAGACCAACATCAGCATCAGATAATTCAAATATAATTGAATCACAAA
TAAATAGCCAAGATAGAACAGTAAATGAAGAGAGTGAAGACTCAGAGGCC
TTGGATCCGCTGCATATTGTTTGGCCACACAGATGGGAACATGATAAAAA
TCCGGAAGATTTCTTTAAAGTAATGTTTCAACTTCATGACGAAGGAGTTC
CATTCAAATTATCAGTCATTGGTCAAACATACCAAGACGTACCAGAGATA
TTCGAAACGGCTAAGCGGAAACTGGACTCAGTAATCATCAACTGGGGCTA
CCAATCACGTTCTGATTATATTATCATCATAAAAAACGCTGACGTTGCAG
TTTCGACAGCCAACCACGAGTTCTTTGGTGTATCCATGTTGGAATGTGTA
TCATCAGGTTGCTATCCACTTGTCCCCAATCGTTTGGTTTATCCCGAATT
TTTCACAGAATGTTACCGATATAATACGACAACGCAATTGCACAAGAAGT
TGAGAAATCTTTGCAAAAGCATCAGTTACACTCGAAACCATCAAGTAAaa
GTTGACTTAACAAGATTTGACGAAGGTGTTTTGGAGAAGGAATATCTCAA
GTATATCTTGCCAACATGAGAAGAATGAAAATATGCAAATGTATAAACAA
AAGGTATCACGAACACTCGAGGAAAAACCTATTGGATAGATTGCAGATCT
ACGAGCGATCTTCGTTAGAATATTAGAAATTGGACGATACTCCTCCGAGC
CTTGACGCGTTTAATATTCATGTAAGATAATTTTGGAAATGGAGGAAATG
GTTGGATAAGCACATGGAAAAATTGCGTTAAATGAAATTTATGTTCAACA
TCATGTTAAGCTTGGATGAAGCGGAATACTCCCAATGGATTGAACGTTGG
ATTGCGTTCCTTTTGCTCCAAATAGTCTGGTTTTAGTTTATATTTATGTC
ATTTTGGTTAGAGGTCAGAGGTACAACTGTAAATACTCCAGCAATTAATC
CCCTGTTTATAAGACACCTTGGAGTAGTAATTATGTTTATTATGCTTACC
CACTNCCGTTTATAAGACACCTTGGAGTACTAATTATGTTAATTATGCTT
AATTATACTCACAATCCCACTAACATTTTCACCGGTTCACTGAAAGCTTT
TCCAAAGAAACCAATTTCTGTGAAGCAAGAAAACCTAATTGATGCAGTTG
GTATATATTTCAAAGTGTAGTTTACTGTCAATGTCATTCCTAAAGAAACT
AGCCATTCATAATTTATCATACTTTTGCTCTCAtccacttttttactttt
ttcataaCTGTTTCACTTCACGTCACGGACTGTTTTTCACACAATATTTT
ACTGTATCTCTTTTCTTCTAgcccttttttcttttctttcctttcatcCG
TTCTTCTATTTTCAGTGTTGATTTGTATTTTTGAGTTCCTTTCTTTAAAC
CCAcgttttaaagttaatcaatattttttctacTTCTTCCTTTTCTTGTT
CAGATATTCTTCACTTTCCCCTCTTACGACACGATGGTAAATTCTTggta
attagcctccgtctcggaagagg
Run BLAST on NCBI

transcript from alignment at sc0000161:456792..468340-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013040 ID=TCONS_00013040|Name=TCONS_00013040|organism=Clytia hemisphaerica|type=transcript|length=11549bp|location=Sequence derived from alignment at sc0000161:456792..468340- (Clytia hemisphaerica)
TATAAACACAAGAACATAAATTAATTAAAATGGAAATGCAAAAACAAAGC
AAAGCAATTCTGTTACTAGAAGCCTTCTACGGCGGCTCGCATAAACAGTT
GATTGATTACCTGAGAGAAATGCTTATCCGTAAAGGTCATGCATGCGATT
GTATAACGATGTCGGATAAGAAATGGCATTGGCGCATGCGTACTAGTTCG
ATGTTCTTTGCACAGGAGTTGAATCACAAAATGGAGGAAGGCAAGAATCT
TTCTTACGAGTAAGTCATTTATTACAATTTACCTTTAATGGATTCATGTT
TTTAGAGAATGGTGTACATTTTTGACGGGGATATAATATGGCGATTTGGA
AAAGTGGAGTGATAGTTAGAGACACTTAAATGCATGAAAGTGTTATGAAA
TCAATAATAAGGGAATTTTTTTATAAAAAGGTTTTTGCCAAGTTTCCTGT
GAATTTGACTTCTTACGGGAATTATTTAGTCAAAATTCACCTAGATTAGT
TCTCGCCAAAATTAAAATCCAATCAAAATAAACTTTTTTTAATGATTTTT
TTAAATCAAATCTAACTCCTAATTTTTGCTGAAACGCCCATTTTAAGGTT
TTTAGGAACAGATTTACCCTACAAATCGCCAAAATGAGTTCCTTTAAAGA
TAGCAAAAGCCTTGTTATTCTTGGTAATATCACGATTAGAACTGCAAATA
GTCTTTATTTTACTAAGGTTTTGCTTGCTCTTATTCACATCTCTTGACAT
TTATCGCGCTTAAATTGGCCATGGAAAAATCTCTATCACTTCCCAATAAA
ATTAAACTACCTCTTGAATATATGGGGCCTTTAAAGTTGTTTGTTTCATT
TCCAGTACAGTATTCACAAGTGCAGTGGTCAACTTAGCTGAGCTGGTTGG
ATTATGTCCTGTTATAAGAAACGCACGAAAAGTTTTATATTTTCACGAAA
ACCAACTCATTTATCCTGTTCGAAAACAACAAGATCGGGATTTTCAATAT
GGGTACAATCAAGTTGTATCTTGGTGAGGAATTTTTCACTTCAGTAAATT
GTACGTCTAGTAATCATGATATTCATGACGCAATATTTTTTACGGAAACA
TCCCGGTTTTTGCTAGTGAAATTTAAACTAGAATATCGATTGAATTTTCA
CTGGAAGTTTAGCGGAGAGAAAGATTGGAAATCTTTAACCTGGAAAGGAT
ACAATAATGTAGTGAGGTCTCTTGCTACAAGCATGGTCAAAATGAGTTGG
CATTTCCAGCTATTTCGACGTTTTTCAAAATTTAGAGTTCGGGCGAAAAT
GGCAAATTTGCCTTTGTCACTTTCTTTCTCAGCTTCATTGGAATTTCAAC
ACTCGGATTTAACCCTTTCAGTCTCAGAGACCCGCATAGTGGGACCCAAA
TTCACCTAGCTTCATCGGGCCATATCTCTGGAACCAAGATATTTCCGGGA
CTCTCGCAGCTACCATTGAAAAAAGCCTGAGATTTTGAAGAGAATAGATT
AGTTTCGGGGCGCCCTGAACCTTTAACCGGGGAAACTTTTAAATTTCTTT
TTAAGCTTTGGGACTGAAAGGGTTAAAATTCTACCTTCGTGAAGAAAGTT
ACCTTGCTTTAAATCGTCTGTGTTAAGTTTGCAGGGAATTCCCCTTTTGT
CTCAAATATTACAGCCATGACATTACAGCCATCACAGACATGAATCTCTA
ACCTTTCCAGGCAAGAAAAAGTGAAGCCACTTATTTCCCATCCAGAACGC
GCCGCAATCATGACGACGGTTTGTATCTATTGGTTCCTTTGTTTTTGAGG
AATGCATGTTTTGAAATCTAGCGATAGATTCTAGTTTCAATCCTGAGTTT
ATGTAAAAACCACCGGTGGGCGTTCTGGATGGGAAATAAGTGGCTTCATT
TCCCATGCAGGAGTCTCGAATCTAGACCTTCGGGCTTGGAAGTCAATGGT
TGTGGACCGATTAGACTGTACTCCATTGGAACTAAAATTCTGTAATATTT
TTCGCATTTTCGCAAACGATATTTTATGTGCATGGACCTGAATAATTTGT
TTTTTTCTTGTTTTACTTTCCCATCGGAAAATTCTCCTAGATGAAAGAAC
CTTGACCTTGGCTCAACGTTTGTAGCCCCCTCCTCTAGGATGTCGATTTT
GATCAACCTGCGATTTACTTTCCCATCGGAAAATTCTCCTAGAAGAAAAA
GTGACCTTGGCTCAACGTTTGTAACCCCATTCTCTGGGATATTGATGTTG
AACGTTTGTTTTTTTTTCTTTTTCTTAAAAGTCTAATTGCTGATGTTGTG
TTATTCAATTCGGAATTCAACAAACAATCGTTCCTGAACAACATCAAGCC
CTATATGAAGACCATGCCAGATTATCGACCATCCAACCAAGTGAGAGATA
AGATTGCATCCAAATGTCATGTTCTTTACTACATCTTTAGAAGCCCAGTA
TTGGGTTCTGAAAGCCCGACGCCGGCGAAGTTGCGAATATTAGATGAAGA
AACGACTTCAAACAGACCAACATCAGCATCAGATAATTCAAATATAATTG
AATCACAAATAAATAGCCAAGATAGAACAGTAAATGAAGAGAGTGAAGAC
TCAGAGGCCTTGGATCCGCTGCATATTGTTTGGCCACACAGATGGTGAGA
GAAATATTGCTCTTTATTGCCGACCCAAAAAAATATGAGCGTTTTGATTG
GTCGAGAGCATCGAGATATTTGCGATATTTCATATTTCTCTAGTCTGGAA
ATATGACCGCGTTGACTTTTGTGGGACTGGGTAAGCGGCGGGAGAAAAAT
CAAAACAAAACCACCGAAAAGAACTGACTTTCGGAGAAACTGACTTGGGA
GTCAAAGGGAAAAAGCAACAAAAATATTTTCAGATTAAATTTTACTTTGG
AGTTCTTCTATAAAAGACACTAAAATCAAATCTGATGAACTAAGAAATTA
TAAAACTACTTGAGACCACCCAAATATTTTCAGCTTTTGGTATAAAATTC
GTCCGTGTGTGATAAACCAAACAGTTTTTTATCAATGCATACAAAAAAAC
TTGAGATTCTTGAATGTTTGCCAGTAAATTTTCTCATAACATAGCAAGGG
AACTGAAATGTCTTGTATTAAACCAAGTGACGAGTGATTTTTATAAAAGT
TCTCTCCTAATTCTCGTTCTCGACGAGGTACGTCCTTGAATTCTCAGCTC
AACAATCATTACATCTTCCTTCTAAAATTCGAAACATTTAAAGCTTGACG
ATAATCAAGAAAGCATCCAAATTGTTTTGCTCTTGAAAAAATGTTGTTAT
TTAACCATTACATACATTTCCATCATGGAACTCCTTTCATCCTCTGCTGC
TATTCTTTTCCATGCATCGAAACAAAAACATAGATAGGAAAAGACTGAAT
GTTACCAATCTGATTAATCCAATGATGAAGGGTTTCTTCTCTATCGAAAC
AATACTGTACACCATCTGCATTTTGAATTATCAATCTAGAAGCTTTCAAA
TACATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGAATGTTTTATTGTTCGAA
TCTAACGTTCGAATTAGATTTTCGAATAAAAACATTCGAAACTACACAGA
AGAAAGAAGCAAGGCGGAAGTAAGTTTTAAAGCAAAAACAAAAATAAATT
TATACCAGGACAATTTTTTGAGTCGACAATAAATTAGTTATCACATGACT
TCTCGTGCAATTATTTCTCGTATTGCACTCAAAGTCATGCGATAACTAGT
ACTTATTTCATAAAAAAATTTATCCAACTGTTGAGGTTTTTTATTCGAGA
CATTAAACCTAACACCTGGGTAATGGAATTTATCTAAATTTGCGAAATTA
GCTTAAGCGTGAAGATTTCTCTACTGGGCAATACATCTCGAATTTGTACT
TTCCTGAAACTCTGAACTTTTCTAGTTTCAGATAATTATTCAGCATTTAT
ACATAATCTTTCTATGGCCAAAAATTACAGCCCTCCAAAGTAGGCTAAAA
ATGGCCAAAATGGACATAAAAGACCCACACCTTGGTGGACTGTAAAGAAT
CTAAATTTAAATATTCAAATCAGCGAAGTTCATGTTTCAGAAAAGTTTGC
AAGATTTTTGGTTCAGCAGAAAAATCTTTATTTTCCGTCCAACTTTTTCT
TCCTTCTTTTTTCGAATTTTTTGAAAGTTTTTAAAGCCTTAAAAAAGTTT
TTAAAGCCTTCAAATCATGTACTTAAGATTAGCATTCCAAAGACAGGCTT
TTTATATCTTTCTTCCTTTTAAAGGCCATGTATATGTTGTCTGCTAATTC
TTTTGGAACAGACTGTCCATCCTTCAAGTTTTAGTTTTTCTCGTAAGCCT
CTGTTAAAAGTGTTGCATTGTTTATGTTTTCAGGGAACATGATAAAAATC
CGGAAGATTTCTTTAAAGTAATGTTTCAACTTCATGACGAAGGAGTTCCA
TTCAAATTATCAGTCATTGGTCAAACATACCAAGACGTACCAGGTATAAT
AAAGTTTCCTTTTTCTGATCACCCCCTTCATTTTATATGGATTTCCATAA
TTGGTATCGAAATAAGAATATAGTTTGAATGTAAATGTAATCTTTTTTTA
TATTTTGATAACGAGAAAGCAATCGGTTCCAAACTCTACCGTCACTATTT
TCCCCGTAAACCGCCGTGATGGCTGTAAACTCTGCGCGTTTATATCCCTC
TACGGATTATAGCATCGTCTAGCTCTAGTATAAAACATCATTTTGAAAGT
TAAGATATAACGAAATAACTTGGTTCGATAATAACCTAGCTGACTAAGCT
TCATAGCAATCAAGTTAGAGTTTGAGGCTGAATACGACACTCCCTTGGCT
AAGACGCTCTTTAAAGGCCAGGGCAAACCATGTGAATGTAGGATGAAATG
TTGGTCCGGTTTGTAGCAATGTAAAATTTTCAACAAAAAAAAAAACAAAA
AAAGAAGAAAAAAGGTGCTGATGAAGTTTGATAGCCATCAAACATTTGAT
CCAACATTTGCGGCATAATGACAGACTCGTGACGTCACTCGTTCTTCCAA
CATTTGACGCAACATTTAACAAAAAATGTTGGTTTGGAAGCTAAAGTTTT
TAGTTTTTCATTCAACATTTCTTTAGGCTGCTGGCATCCACCAACGGATT
CGTGCTCCTTATAGTATACCTGAGATTTTGTAGAGGTCTGCGATTCAGAC
TAACATTTTTTATGAAAGTTGGACCGGTTTGCCCTGGCCCTATCGACCCG
CATGAATTCGCATCTTTTCGACCTTTCAGCATTTCCATTTTTCTTTATAT
TCATTTTTTAGAGATATTCGAAACGGCTAAGCGGAAACTGGACTCAGTAA
TCATCAACTGGGGCTACCAATCACGTTCTGATTATATTATCATCATAAAA
AACGCTGACGTTGCAGTTTCGACAGCCAACCACGAGTTCTTTGGTGTATC
CATGTAAGCATGAACATATAAACGACTGGACATCCATCTCCTTTGTCTTT
TTGAAGATAACAGTGCTAGCTTCGTTGCCGCCTCGTTAAAAGCATAAAAT
GAAACAATAGATTTTGATGATATAACACTTGGAAATACCTTGCTAAAAAC
GTCAAAAATTCGACAAAAGTCTCTGTTGTTCTACTCTTCTCAAGTCTTTT
ATCTATATTATAACAAAGATAACAGAGTCAAAATCATCGTCAGCTTGTCA
AAACCCCGACCAATATTATTAAATTTTGACTTAAAGAGACATAACAGTAC
TTGTGAAATTTGTAAACAAACTGTATGCAGCGGATACAAAATCAAAACAA
ATGTCACATGTCAAAATAAAAAATCCAACCAAATATGGCTAATTTTGATT
GTTCAATTGTTTTACAAGTTTGTTTTGGACACGTGATTTTAATTGTTCTC
TTTAATGACACGTGGTTCGCGCAATGTTTACATTTTACTACTTTAATGTC
CCTTTAAAAGTGTCGAATAATTTTAGAGAGTGTCGCATTCTAATTTTGAT
ATTCTTATGACACAGGCTCTCAACTTTCGCAAGCAATTTTTTTCAAGTCG
TAAAAAAAATTATCGGAGTGACAAAAGGGATTCAAAAGTATACACGCAGT
TGAAATTCTGCATTTTAGAGTTGAAAATGTTGATAAAATATATTGCAAGC
TTGTGAAAAAATTCGAAAATAACATTTTTGTGAATTACGAGTAATGTTTA
AGCTCTGTTTTACCTAGATAGTTCAAAGAAAATATGACGGAATATTGTCG
GATTTTTCATACCAATTTTGAAATACAGGCGGCAACGAAGCTCGCTTCAA
AGAGACAATAAAAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCCTGCCGTACCCGTTGCGTCGTGCCTGTTAGGGAGTGT
ATCAGAAATAGCCAAGGGCATGGTCTAGAGTCGATTCTTTGCATTTTCAA
ATTTACTGCAAGAGTTTCAAAATTTAAAAGTGACGTCAAAAAATCAAATG
TCTATAGCCCGAAAACCTGGGCTCCAAACATTCGAAAGATTCGAAAAGTG
AAATAGACGTTAATTGCGTAGAAAAAACGTGAGTGACGTCGTACAAGTAT
AGGGGATAGAACATCATTTCATTTCTGCTTTATCGGTTTTAAAAAGCTAT
TAAAACATTACTGACCAGGTAGTTTAAGGGTCTGATAGACGAGGGATTGG
AATAATTGGGATTGTTTAAGGAATTAATCAAAACTCAGTACTAAGCATGG
AGGTTTCGGTGGAAGGTATAAAAGGGGGTAATTATTAGGTAAAATAAGCG
AGAGTAAGATGTATCGGGATGAAATAAAGCAATTTAGATTACAGTTTTTC
AAATTTCTAAACCTTGAATTTCAGGTTGGAATGTGTATCATCAGGTTGCT
ATCCACTTGTCCCCAATCGTTTGGTTTATCCCGAATTTTTCACAGGTATA
TTTATTTTGTCTAATCAAAGTTAATTTTTCATCAAAGCAATTTTTAGGCT
TTGATTGTGTTCATTTGACTTTCAAAGTTGATCAGTCCATTGACGGAAAT
GTAAAGTTTCTAAACAAATGATTTTTTAGGTGATACCCCGGGGGTACTCG
GGCAATAATAGGTACTGGGTATGTGCGGACGGTAAAGGGTTGGTTTTTCA
CCTTCTTAGCGTTACAAAAATCGAAAAAACCTCAAAATAGTCTCTCTAAG
GGTCGGGTTCCCCCCTTTTCGGGTCTTTTTAGGGTTCGCAACCCATTAAA
AGCCAAAAACAATCTCTATAGGAAATTCTTTGAAAATCATCACTCTTTAG
GTCGCCTTTTAGTAAATAAATGTTTAGTCTCTCTAAGTCCGGTCCGCACA
TATCCGACACTAGCGAGATTATGTATCTGGAATTCTCTACGGCTACGGTT
AAAGTTGGCGAGGGAAATGGCGAGTGAAGCAAGTATGGCGGGTGAAAGCA
AGTTCGATATTTGACGTACGGCATTATGTCGACTTTGCTTATACGGTGTT
TTGGTGTTTTTCCCGTACAGAGCAAAGTAGACAACGACANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNACGGCATTATGTCGACTTTGCTTATACGGTGTTTTGGTGTTTTTC
CCGTACAGAGCAAAGTAGACAACGACATGTCGTCTTTGGTGACAACCCGC
ATGGGCAGCCCCGCAACCATAGCCTTAGAATATCTCCGATACATAATCTC
GTTATTATCCAATCCTTGGGAGGGGGCTGATATCTTTTGGACAGCATGTA
CTCACCATAGTATAATCAATACTTATTTAATGTTTCTTACGTTCAGGCTT
GTTGGGTAAAGTATTTATTTTGGATGATTGTATAATAACCATTTATAAAA
GCTAGGACCTGTTACCTATCCCATTTTAGAATGTTACCGATATAATACGA
CAACGCAATTGCACAAGAAGTTGAGAAATCTTTGCAAAAGCATCAGTTAC
ACTCGAAACCATCAAGTAAAAGTAAGTATTTTTTTAAATTTTGTTATCAT
TAAAATCTCCTGAAAATAATAATGGTAAGTTTACATTGATTCTACCAGAA
GTTAATTATTAATTTTTCCCTTCTTAATTTTTCATCTTTATTTTGATTTT
TTTTCAATTAATTTTTAAAGGATGATATCACAGGATCGATTATCACTTGA
ACGATCGAGCCCATGTATTGCATTTTAATCCAAACTCCATTAGAAAAGTT
TTAATAACAGCTAACTTAGACAGATCACAAGATCACTTTCCCACCTAAAT
CTAAAATCCTACTAAGGTATGTAATGGAATACATAGAACATTAGAGGCGT
AGAGGACATTATTCAAAGCAATGTTTTTGCCAGAAAATGCAGCTGCTCAA
AAATGCGCTAGGAAGGCATTCCTTTTATGTAAATTTTATACAATTAGCTG
ATTGTGATGTTTCTTCTATCCTTCAGGTTGACTTAACAAGATTTGACGAA
GGTGTTTTGGAGAAGGAATATCTCAAGTATATCTTGCCAACATGAGAAGA
ATGAAAATATGCAAATGTATAAACAAAAGGTATCACGAACACTCGAGGAA
AAACCTATTGGATAGATTGCAGATCTACGAGCGATCTTCGTTAGAATATT
AGAAATTGGACGATACTCCTCCGAGCCTTGACGCGTTTAATATTCATGTA
AGATAATTTTGGAAATGGAGGAAATGGTTGGATAAGCACATGGAAAAATT
GCGTTAAATGAAATTTATGTTCAACATCATGTTAAGCTTGGATGAAGCGG
AATACTCCCAATGGATTGAACGTTGGATTGCGTTCCTTTTGCTCCAAATA
GTCTGGTTTTAGTTTATATTTATGTCATTTTGGTTAGAGGTCAGAGGTAC
AACTGTAAATACTCCAGCAATTAATCCCCTGTTTATAAGACACCTTGGAG
TAGTAATTATGTTTATTATGCTTACCCACTNCCGTTTATAAGACACCTTG
GAGTACTAATTATGTTAATTATGCTTAATTATACTCACAATCCCACTAAC
ATTTTCACCGGTTCACTGAAAGCTTTTCCAAAGAAACCAATTTCTGTGAA
GCAAGAAAACCTAATTGATGCAGTTGGTATATATTTCAAAGTGTAGTTTA
CTGTCAATGTCATTCCTAAAGAAACTAGCCATTCATAATTTATCATACTT
TTGCTCTCATCCACTTTTTTACTTTTTTCATAACTGTTTCACTTCACGTC
ACGGACTGTTTTTCACACAATATTTTACTGTATCTCTTTTCTTCTAGCCC
TTTTTTCTTTTCTTTCCTTTCATCCGTTCTTCTATTTTCAGTGTTGATTT
GTATTTTTGAGTTCCTTTCTTTAAACCCACGTTTTAAAGTTAATCAATAT
TTTTTCTACTTCTTCCTTTTCTTGTTCAGATATTCTTCACTTTCCCCTCT
TACGACACGATGGTAAATTCTTGGTAATTAGCCTCCGTCTCGGAAGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007294XLOC_007294Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013040-exon-sc0000161-1575043694:468082..468340TCONS_00013040-exon-sc0000161-1575043694:468082..468340Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1575043694:467318..467480TCONS_00013040-exon-sc0000161-1575043694:467318..467480Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1575043694:465697..466059TCONS_00013040-exon-sc0000161-1575043694:465697..466059Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1575043694:463648..463757TCONS_00013040-exon-sc0000161-1575043694:463648..463757Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1575043694:462688..462829TCONS_00013040-exon-sc0000161-1575043694:462688..462829Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1575043694:460996..461066TCONS_00013040-exon-sc0000161-1575043694:460996..461066Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1575043694:458270..458361TCONS_00013040-exon-sc0000161-1575043694:458270..458361Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1575043694:456792..457814TCONS_00013040-exon-sc0000161-1575043694:456792..457814Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1510915933:468082..468340TCONS_00013040-exon-sc0000161-1510915933:468082..468340Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1510915933:467318..467480TCONS_00013040-exon-sc0000161-1510915933:467318..467480Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1510915933:465697..466059TCONS_00013040-exon-sc0000161-1510915933:465697..466059Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1510915933:463648..463757TCONS_00013040-exon-sc0000161-1510915933:463648..463757Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1510915933:462688..462829TCONS_00013040-exon-sc0000161-1510915933:462688..462829Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1510915933:460996..461066TCONS_00013040-exon-sc0000161-1510915933:460996..461066Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1510915933:458270..458361TCONS_00013040-exon-sc0000161-1510915933:458270..458361Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1510915933:456792..457814TCONS_00013040-exon-sc0000161-1510915933:456792..457814Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1491911889:468082..468340TCONS_00013040-exon-sc0000161-1491911889:468082..468340Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1491911889:467318..467480TCONS_00013040-exon-sc0000161-1491911889:467318..467480Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1491911889:465697..466059TCONS_00013040-exon-sc0000161-1491911889:465697..466059Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1491911889:463648..463757TCONS_00013040-exon-sc0000161-1491911889:463648..463757Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1491911889:462688..462829TCONS_00013040-exon-sc0000161-1491911889:462688..462829Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1491911889:460996..461066TCONS_00013040-exon-sc0000161-1491911889:460996..461066Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1491911889:458270..458361TCONS_00013040-exon-sc0000161-1491911889:458270..458361Clytia hemisphaericaexon
TCONS_00013040-exon-sc0000161-1491911889:456792..457814TCONS_00013040-exon-sc0000161-1491911889:456792..457814Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000161supercontigsc0000161:456792..468340 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.000541167	1.08617	1.63427	0.141856	6.87989e-05	1.4144	0	2.5463	0.79614	0.955992	1.0119e-05	0.925491	1.06149	0.228012	0	1.25754	0.509348	0.427443	2.01478	0	0.00664133	2.13486e-07	0	2.39531	1.91072	0.00195093	0.887954	1.80077	0	0
Blast
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BLAST of TCONS_00013040 vs. Swiss-Prot (Human)
Match: GTDC1 (Glycosyltransferase-like domain-containing protein 1 OS=Homo sapiens GN=GTDC1 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 4.987e-92
Identity = 159/387 (41.09%), Postives = 218/387 (56.33%), Query Frame = 1 
Query:  256 TIFTSAVVNLAELVGLCPVIRNARKVLYFHENQLIYPVRKQQDRDFQYGYNQVVSCLIADVVLFNSEFNKQSFLNNIKPYMKTMPDYRPSNQVRDKIASKCHVLYYIFRSP----------------VLGSESPTPAKLRI---------------------------LDEETTSNRPTSASDNSNIIESQINSQDRTVNEESEDSEALDP-------------LHIVWPHRWEHDKNPEDFFKVMFQLHDEGVPFKLSVIGQTYQDVPEIFETAKRKLDSVIINWGY-QSRSDYIIIIKNADVAVSTANHEFFGVSMLECVSSGCYPLVPNRLVYPEFFTECYRYNTTTQLHKKLRNLCKSISYTRNHQVKVDLTRFDEGVLEKEY 1245
            T+F S+V+NL EL  L P +   +K+LYFHENQLIYPV+K Q+RDFQYGYNQ++SCL+ADVV+FNS FN +SFL ++  +MK +PD+RP + +   I  KC V+Y+  R P                +LG +    A L +                           LD         S    S++ +S  +    + + E++ +  +DP             LHIVWPHRWEHDK+PE FFKV+  L D G+ F +SV+G+T+ DVP+IF  AK+ L S +++WGY  S+ DY  ++  ADV +STA HEFFGV+MLE V  GCYPL P  LVYPE F   Y Y+T  QL K+L+N CK     R H  K ++  F    L  ++
Sbjct:   61 TLFASSVLNLTELAALRPDLGKLKKILYFHENQLIYPVKKCQERDFQYGYNQILSCLVADVVVFNSVFNMESFLTSMGKFMKLIPDHRPKD-LESIIRPKCQVIYFPIRFPDVSRFMPKHKTTHLKKMLGLKGNGGAVLSMALPFQPEQRDSEDLLKNFNSECDTHCGLDTARQEYLGNSLRQESDLKKSTSSDNSSSHHGENKQNLTVDPCDILGGVDNQQRLLHIVWPHRWEHDKDPESFFKVLMHLKDLGLNFHVSVLGETFTDVPDIFSEAKKALGSSVLHWGYLPSKDDYFQVLCMADVVISTAKHEFFGVAMLEAVYCGCYPLCPKDLVYPEIFPAEYLYSTPEQLSKRLQNFCKRPDIIRKHLYKGEIAPFSWAALHGKF 446

HSP 2 Score: 66.6254 bits (161), Expect = 4.987e-92
Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 3 
Query:   54 AILLLEAFYGGSHKQLIDYLREMLIRKGHACDCI--TMSDKKWHWRMRTSSMFFAQEL 221
            +IL++EAFYGGSHKQL+D L+E L       DC+  T+  KKWHWR RTS+++F+Q +
Sbjct:    2 SILIIEAFYGGSHKQLVDLLQEEL------GDCVVYTLPAKKWHWRARTSALYFSQTI 53
The following BLAST results are available for this feature:
BLAST of TCONS_00013040 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GTDC14.987e-9241.09Glycosyltransferase-like domain-containing protein... [more]
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