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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013080 ID=TCONS_00013080|Name=TCONS_00013080|organism=Clytia hemisphaerica|type=transcript|length=1009bp
aaaaaaggttttcgcTCATGATGTCgcacgaaagtggagaccggccttta
ctcCGGTCTTCCCGCTTTAAGGACGGACACGGACACGGACAAGTCGATGG
CGCTCGCTTCagattttctttccttttacCAGTTTGCAAGTGAACAGGTG
TCAGAGAACAGCAACAACCAGGACAAGAAAAGATACCAAAATACTGAAAA
TGTCAAGATACAGGAAATCAGTTACATCAGTCTACGTCAAAAACATTCAT
AATGAAGTCagGCCGGATGATCtgcgaaaaatgtttttgaagtaTGGAGA
TATCAGTGATGTGTACGTTCCACTTGATTATTTCACTCGCGAACCTCGAG
GATTCGCTTACGTACAGTTTGACAACCGTGACGATGCAGAAGATGCTATT
CACTATCTGGATGGGACCAATTTCTTTGGTCGAAATCTTGAAGTCACTCT
CGCTCAAGGAGACAGGAAAACACCTGGTCAAATGAGATATAAAGATGGCG
GCAGTGGTGGTGGTGGAAGGAGacGAAGAAGTTATTCACGAAGCCGTTCG
CGATCTCGTTCACGAAGTCCTCGCCGAAGACGTCACTCACGTTCCAGAAG
TCCTCCGCCACGCAGACGTTCACCGCCAAGACGAAGAAGTCGTTCCCAGT
CACCGCCAAGGCGAAGAACGCGTACGCCAAGTCGGTCACGTAGTCGAAGC
AGATCGAGATCAAGAAGTCGTAGTCCTAGCCACGATCGGCATCGAAGCAG
ATCCAGATCGAGGTCCAGATCGAGGAGTGTATCTCCACAACATCGTAATT
AGAAGTTTAACACGTGACTTTTGTTTAGCGAAAGTTAAAGTTTTCTCgac
ttttatcttttatttttatggCTTACCTATTtgtaaataaattcatcatA
TCGAAGATGCGTTGAAAGAAAACTTGAATAGCACTTAAAAGCGAACTTTT
AGTCAACTATCATTGGTTTCTAATTGTATCCTCATAGTCTGGATTATGAT
CACCTTTAC Run BLAST on NCBI protein sequence of TCONS_00013080-protein >TCONS_00013080-protein ID=TCONS_00013080-protein|Name=TCONS_00013080-protein|organism=Clytia hemisphaerica|type=polypeptide|length=200bp
MSRYRKSVTSVYVKNIHNEVRPDDLRKMFLKYGDISDVYVPLDYFTREPR
GFAYVQFDNRDDAEDAIHYLDGTNFFGRNLEVTLAQGDRKTPGQMRYKDG
GSGGGGRRRRSYSRSRSRSRSRSPRRRRHSRSRSPPPRRRSPPRRRSRSQ
SPPRRRTRTPSRSRSRSRSRSRSRSPSHDRHRSRSRSRSRSRSVSPQHRN Run BLAST on NCBI transcript from alignment at sc0000162:147176..162329+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013080 ID=TCONS_00013080|Name=TCONS_00013080|organism=Clytia hemisphaerica|type=transcript|length=15154bp|location=Sequence derived from alignment at sc0000162:147176..162329+ (Clytia hemisphaerica)
aaaaaaggttttcgcTCATGATGTCgcacgaaagtggagaccggccttta
ctcCGGTCTTCCCGCTTTAAGGACGGACACGGACACGGACAAGTCGATGG
CGCTCGCTTCagattttctttccttttacCAGTTTGCAAGTGAACAGGTG
TCAGAGAACAGCAACAACCAGGACAAGAAAAGATACCAAAATACTGAAAA
TGTCAAGATACAGGAAATCAGTTACATCAGTCTACGTCAAAAACATTCAT
AATGAAGTCaggtatagaccttttttcaaagaggacgtcctgttgaataa
ttatgtagtccagccataaaacaCATGcatactgtatcatgcatattgta
ataattatgcaaggttttatcattatttttctgctggactacataattat
tcaaaagggtggcctctttgaaaaaaggtctattgatatCATAAGTTACA
GTTTTTACACCATCGCATcataaccagacggtgtcaatcgaacaacttcg
aacaaaaatcgcaatcgaaccaatcgaaagTAATCGAAcacgatcgaata
attgcgattcgattgtcgaacgtaatcgaatctcaatcgaacagccgatt
cctgggtaatattcgattgtgttcgattgcgttcgagtaacgTTAGATTG
TTTCGattaatagttgactatgttccatttgttcgattacgattatgttc
gatgagtttgattgcgattttaaattaaattggatcactctgttagagct
ttttagcacgggcggccgagcgcttattaagtatcgtacgaaagcgaata
aaatctaaatcaatcgaacgtactcgaacataatcgaatacaatcgaacg
taattgaagcaatcgagcggcaaatcctgggtaatattctattgcgattc
gattgcgttcgacaatcgaagtGCAATTAtccgattgtgttcaattgcgt
tcaattgattcagcgttcgattcgttcgattgacaccgtctggtcatAAA
CTTTTAAGcaccagtagcggcctggcttaattttcttggtggtacaaact
atgaaattggcgcccctggtatttttgtccttatttgcgccctataCCAT
TAAGTGAAACTATTAAACTGGTAAGAGCAGTGACTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNggtaagagcagtgactggttgaaagtaacg
cccggaatctctgagttaacaaagttttatttatacgaaggtggtggtaa
tgataatttgatatatatttccttgttatttcctgATCTTGCTGTACTCT
CCATTAAatatcaatggctgaaagaagccccaaaaattcgaaagttggca
agaataagggttctttgcaattgtggcgccgcaggcaaaaaaataatttg
gtgtaagaaaggtcaaacagcttataagatattctaaaaaggagaaagtt
agtccgcataagaccacacgaagcgccgcaggcgaaaaaaaatttacatt
gcacttatagaacgcgctaaaaatgtgtcaaagggcgcaaaatcgcccaa
ccaaacatcaaaaaaaattttggcgcccccttaaaaagcttttttggcgc
ccttctcaggtctttctgggtggtgcactgcacaccctgcaccccctgcc
aggccgccacttaAGCACAAGCTCAAGCAAGAAGGGCAGGGTCAGGGACA
AAATTAGCCTGGGTGGTACCGTGAGCGTGAAGTCGgctaacttgcatcag
tggaggctaacatacatagccctcaaatgactgaccaatcaaaacagcaa
aatttcaaaacaaaagaactatGCAGCTTTGCGTCCCAGCTCACTCTTAC
ACTTTGATATTTGAGTCTACACCTACTCTTGTGCTTTCCACATTTACCAG
CGTCTTAGAACATCTTGcgctaatgtttttaactttttattttattttat
cctttatgtttccaaaatcacgaaaatgtacGTAATGTATTATGTATGTG
ATAATTCAATAGAACATGAAATAGAACTAGCACTAGaacttcccaacaac
tttcgtttttgcttatgtaggttttaaaatccacaagtaatgaatctctt
atagctttatctgaataaatcaggttgaaaatctttcgtcagttttcatt
ccgtacgtttttatccacgtggtgaaccggtttccccgatttcccgataa
ttaaaaattggaactttcccgtgggcgcggTTGGGTGTACCCGCcatcgc
aaaatatttttcgtgaaaatttaccgtattctaacggtAATATAATCTAA
ATAGGAAAcaaattattaaatttgattctttttttgttcgtatttctaaa
tttcacgataaaaagaactatttacaacttattttctttaacgggcgttg
aatcgacattgacatatttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNgacatatttaatgatgtcataatcaatgccgtgc
atattttgtcagcgccgtgcatattttgtcaacatctttttcattggata
aataccactaaaataagagaagtaaacataaatttatcgcccgcgagcat
gGCTTAGCCTAAGCGCACCTCtcattcattatctaagaattgaaacgggc
aaagattaccgggcgggctgatagcggacaaaggttatttgaagatattt
tcagttataatccaaggtagaacaaactaaacatagaaagggggtatttt
ttagtgctctatacgatgatcggtattttttttgaattctatgtttagat
ttttctacccagccctgtTGCTATatacgcgcgccctgttgctaagacct
ttgattgaaatcgaaagtgaaatgaggtcctgactggcTTGAACAGCTCA
TCCAACTCGTTGAGTCCGATGCTTCGACATTTCCTTGAGGCTGTTGGAGT
CAGCTTGCCTAAGGTTGAAATAGTGGGCAAGCAGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNaaatattttggcctttaaagagcctgggggctaaaattaccaaaaat
ttgggggacctagattgttgggggacctagatgatctgactgagactctg
ggggctgtttaactaatttcaaaagagctcttatcttactattaaatcaa
atataaaaagcaaaagatttgttaacataaatattaatacaagtaaaatt
tagttttcatttatcagtactgtactcgcatatattttttattgacttct
ctctacGGGGACGGGAgaagaatgtttttgttttaggtTATCTTGcttag
gggacctagcacaaggcaattttttggggggagctaaattgttgggggga
gctaaattgttggggggaccttactttgttggggggagctagaaactTGG
CTGAAGCTATGTGCATTAGTTTTTGTAACTCTGGGGGCTAAATAACACtt
cataaatatttttctttactgttggtttttaatttctctaaacctttatg
ttttcatgcaaagtgtgatctgatccttaaaatgcaaaaatgaagaNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAAGTGAAACTATAAATTTTTAggtacatatt
ttacaaaggCAAATATTTGTTAGGTTTATTTCATTAAGTGAGGATTTAAA
TGAATCGATGGAAGGCTTTTAAGCTTAGTATTTTCAGGACATCGAGACTT
TGTTTCGCAAATCAAACTTAATTGTTTTTGATTTATAGACCTGCTGCATG
AAttcaggatttaattttttctcagaTTTGAAAACCNgaaccccagtcgg
agccatgttgtgaggaaggtgtctaaagtgttttttgaatacttctttgg
GGCAGTTTGTCAAATCTCTTATTGGTCTGGGAAGGGTGTTAATTGAGGGC
CTTCTTGGGAAAGACTTCCCctccagatatttttgtgtttaatattgaca
gcttttagaTTGCAAATTCTCCCCGATCTCTGATTTATATGGCAGGAAAT
GCCTCCTTTACTTTTGTCATAATCAAAATTCGGGACGTTGCCTTCAATGA
CGTTCCAGGTATAAATTATTTGATACCGCTCTCTCCATCTTTCAAGGCTA
TACAGTTTTACTGATTTGAGTTTTTCCCAATAATCAAGATGTCTGAGGGA
TGgaattccctgtaaaaatgaTTTCTGAACTTCTTCCAGTTGCTGGATAA
GACCACGCTTCCAGGGAGACCAGAGTTGAGAACAGTAGTCCAAATGAGGG
ATGGCTAGTGCTTTCCATAAAGTTAACATGGTTTCAATTNTCATCAAACA
GGTGTCGTCAGCAAACGATGCCTTATTATCAATATCTCGAATCATGATTA
GGAACGCGGTCCCAGCACAGATCCTTGTGGCACACCTGAAATAGAATCTG
TTTCTGAGGACAAGGTTGAGTTTACTGAAACTCTCTGTGTTCGATGAGTC
AAAAAGGATCTGATCCATTCAAGGAGTTTACCGGTTATGCCATTTCTCTG
AAGCTTGTGTAACAAAATGGTGTGGTCTACTCAATCAAAAGCTTTACTGA
AGTCTAAATAGGTCCAGGTGCTGAAGTTGGTGACAGTGTACcgatttctt
tgacaaattccTCGATAGTCAGATTGATATCTTTAAGTGTTGGTATTTGT
GNTTGTGTCAGAAAAATAACGAGAActttgcttcattttttttttctttt
tttttccgaTTTATTTAACGTTGGTGTTACATAGTTATAATTAAATACTA
ATTTATACCAACTATTGACAAAAATGATTATATGAAAAGATAATTTCTAT
AAAACTANAGTTCGTAGTTTTGAAGAGGTTGGGTGAAGACAGACTTGTAT
TGGTTTTGTAGGATATTGGCCATCAAAAGGGTATCATTAGTCAATTTGTT
AGTGTCTGGATCGATTAATAAGGGTACAACTTTtggtttagatttcgaga
aGCGATTAGCGTACAAGTAAAAGAATTTTGGGTTGGATTTGATTTTAGAG
GTTGCTTGAGCTTCTTTCTGTTCCCTCTCATAAGCAAAGGATTTTTGAAG
TAGcacttcaatttcaacaagtttttctgtagttttaagattttgaaatc
ttttcagtttctttctttttcgcaTTAAAATCCGCCTGTCTCTTGTGAAG
ATTGAATCAGAGTTATTAGTCAGTAAGAAGTTAATATATTGCCATTAGAA
TGAGTAGGTTTATGGATCATCTGGTTCAAGTTTAAAATTGAAGTAAAATT
GTTTAAACATCTAGAAGTTGTTTGTTGCAGCTAATTGATGGTATGTAAGA
GTCATTTTTTTATGGTGTGGGGTATATTGAAATCACCACATAGATAAATA
TCTGGGGTATTTCCTTCGATTGTTTCGATGATGTCTTGCATTGCTGAGAT
AAGGTCCAAGAATTCCGGAGCTGCTGATTTGTGCAGAATGTGCTGTCTAT
AAAGGACACCAAGAATAAGGGTAAGGTTTTTTGAATGAAGTAGTAGAGCT
TTATTGActctttctgaaaatttcaagtattgGCTCAAACATTGGAGAAA
CGTCACTTCGAAGATAAAATGCGACACCACAAAATGTGGATTTGATGCGA
TTTCTATCCTTACAAAAAAGCTCATATCCCTCAATTTCAAGCTCTGCTTT
CTTGTGCGAAGATGATAGCTCGGTTAGGCCCATAAAAATGTGGTTCTCAG
AATGAAGAATTGATGCCAGTAGAGGAACTGATGATTGAGTGGTCTGGGGA
CATAAACCCTGAatattcataaaagaaaaagtattcATTGATGTGGTATC
CTTTGTTCGTTGTGGTGAAAATTGCTTTGGTTGAGTGGATAGTCCTGAAG
ACGGGGGTGAAATTGGTGTATGGGTATTTCTGATGGAAAGTTTTAGACGG
TTGCTGAATATTTCGTACATTCAGATTGGTAGTGATCATTGATATCATTT
CTGTCCGAAAATTGTCTAAGATTTTCAAGATTGTTGTGTGTTTGTATGGT
TCTTTAGTACTGGGTCCCTTTTAGTCCCCTTGACATGAGTAAAAGTGCAA
TTTGTGTTAAAACATCCACCTTTTCTGATCGATGAAGAACACATACGTGG
ATGAAACATGTTGCATTTTGTGCCAGCATTACAGCCATTTGGGGATTTAT
TACCATGTCTTAGTAACTTGGTACAGATTTTTGGATACTTGAATCGGCAA
TCTTTACCTGTGATGCCATATTTACATTTTCCTTTCTTGTAAAAGTTACA
AACTGGAGTTTCTTCAGAGACTTTGTCCTTGGTTGTAATATTATTCGAAG
ATAAGGTTGTGTCGTTTTGTAAATCGcgttgaaatttagattttaggaAA
TTAGTCCTACCCAGGTATATTCCATCAACAATCTTATTCGAGGGTCTGTC
GATAATAATATCTGGGGTGATTGGAATGTGAGGGAGTGTCCTTTTTGGAG
TGGGTTGGGTTCCATTTAAGAAAGATTCAGTGGCTTCAACAGCTTCAGCG
ATCTGCGTAGGTGAATTCGTTATTTGAGCTTGTTTTACTTCATCTGTTTC
ATTTTTGTGAGTAAAATTTATGTTTTCGTCTCAACATGCCGGGCATAGAT
AAAAGATGGGATTACATAATTTCTCATGTTCATTCAAATGATTCATGCTT
ATCAGAAGTTTAAGATAGCATGGCCGGTGCACTTCCTGACCACACGCACC
ACAGCTAATGAGTGGTTTGTCATTGAGTTTGCATGAATATGATTCTTGAC
AAATCTGGCATACATCtgggaaaaaatttttgatcttCAAACATAATNTC
TTGACAAATCTGGCATACAtctgggaaaatttttttgaacttCAAACATA
ATAGGTGGATTGCATCATCCTTGTTAAGGTTGTTAGATGGTAACGACGAT
GAAGAGGTTGTGAGATAGTTAAGGGTTTCAATGATTGGAGATTTGCGACA
CGATTTAAGTGCTTTGAACTTTTCTTTTGTTGGAAGTTCAGGGTTGTACA
TCCGTAAGCAATTTTTGATAACGTCAGTAGGAGCATTCTCCACAAGACCA
GCAAGAGCTCTCTTCCAAGTTTCAACTAAAAGTCATCAATATTACAGAAT
TCAGAGGACAGGCtgtactttcattttcagtgctTTCAtttcgcccatag
ttacaggtgcttttaagcaaaaaatcaaacaaagaaaattttcaaatcct
tcattttgaaaaatacaattaaaaataaaacttttccatcaTTCACTTTT
TCGCACAattctttgaaatgaaaatataaattcttCTTGTATTGGAGGAT
TTTTcgctgcactttgttgacaatctaactctcgcataaAACTCCTgctt
tcttcaaaaaattaaagataagaaaaagcCTAAGCCTTAGGATTACGGAT
TTGAAACAAATGAAAGATGCGTGACGTATAGTAGCAGAAAAGCTCATCGG
TGAAAAATAGTCCAAGCCCCAGAGTAATCAGTACAGAAggtcacttttgt
ttttatagcagattttgatataaaattcTCACTTgaattacttgtcaatg
tattGTTTCAACTAAAATGTTGctattgtattgttgtaaaggaaaaaaga
aaagaggtAAAGCTATCCTAGCCTCAAATCCTAATAGTTTTAGTCTTAAA
TATCTCAGCTACTCATTTTTTCAAGTTACATGTGTTTTCCNAAAGAGTTT
TAGTCTTAACTGTCAGTATGATTTGGTTGGGACGATTGACTTGTAACTTT
TCACATACAAAGCTGTAGGTGTAAGTGGTATATTCTGGTATATTATGGTC
ATTTGACACTTGCAGCTAAGAGAGCAGTTAGAGTAAAAGGTGGCGTTGTG
AGGTCGAACAGGAGGCTAGGATAGCTTTACCTTctttgataatgtctgaa
aatgagtttgaaattttcaaacaatttcgcccttagggttttgcctgggg
agaaaagaaatgtcccaaagaagggatgttccaccagtgggattttaggg
gattttttcctgaggcatgtttatgagaaggtctggagaaagtttcagct
agatcttatttttttcccgtaaattatgctaaacgacccccaCTAATAGA
CTTGATAAGAAATATCTCAGCTactcatttttttcaagttACATGTGTTT
TCCTTGAgataaagaaaacttcaagggaAATTATTCAGAAAAGTTTACAT
TTTGAGACTTATTGAGGTAGATTTAAAATGATTTgttactctcaggtgcc
taataaacagACCCCCCCCTTTATTaaagttttaagatttttctaatCTG
GCTCTCcgtttattaggtacctgaAAGTAGATGTTGTAGCAGTTGTGAGC
AGTTCATCCCAATAATTACCTGGGGGGctgggtactagggcaaaatgggt
tacggggatgttCCGCTGGTCAGGTTACCCTTTTTAACcgccacgagtcc
caggtagggtcgcaaaaataccaaaatagaaaaatcattcCCTCGTAGGC
agtcgtagggtgccttttttggaaaatttggggaaaaggtggaaaatttg
agaaacttttggatttttttcgcaactttcggcaaaatttttgaaaaagc
gagtcccacgtagggtccatttttcaaacctcagcggagcaccctcgtcg
gtcggcaagggtagccCCCCCGGAATAATTATCTGTTTTGGATGCTAAAG
ACCTccctttttcaaaaaccttccTCGAAATGTTAGAGCTCCCCTTCCCC
ACATATACTCAGTCTCTACGATAATAATGAATTATTCTCTTTTTCGTTTT
AGGCCGGATGATCtgcgaaaaatgtttttgaagtaTGGAGATATCAGTGA
TGTGTACGTTCCACTTGATTATTTCACTCGCGAACCTCGAGGATTCGCTT
ACGTACAATATCTTTTCAATTAATCTCAAGCACTTTTCTTCATGCTACTT
TTAGTGTATTTTCAAGTTTTCCCCTTTCACAAACAATTGGCAAACTGGCT
TCTTTCCTTACAATTCTGAAACtttatttcaatcaattttgtAGAATCTA
ACAAAGACAAAGACAAAGTAAAGAtttgtttaatttcaaaagAAAGATTT
CGAGACAACAAAAGCTAAAGTAAAGACAAAGATAAAGGCTTTTAAAGACA
AACTTTCCTGAAAAAGACAAAGCAAAGACAAAAGAAccaaaagtttaatt
tttcaaagacaaaGACAAAACCTTTAGCCAAAGCCAGCTCTCGAAAGAAA
ACACAATACAGACGAAGGAATGTTTAAGGCAAAGACAAAGACAAAGCTAA
AGCCAAAAATGGACACCAAATGTTCAAgtcaaaaaatctttgtaaGACTT
ACTTATGGCCATCCTTTAAATTGTTCTTTAGGTGTTTTAGTCCAGTTGCG
AAATAACCTTTTTTGCTTGATCCTTTACAAGTagtgtacacatttttttt
attagaacctagtttataagaacatataggctgaaattcgtcgaaaaatt
aagcatcttaagaacatgcccagcctcagtttggaaaaaaatgacaagaa
actacaattttttcctctttttaagcagttttaaccgaatttaggggtgg
atcttcaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNctgaaaaattaagaacgcatttaagaacattttaggctga
aaattgctaaaaaaataagcacatccaggctcagccaaattttaggtgtt
ctaataaaaaaaacgtgtattcgggtttttatttttactttctcATCATA
ATTGTCCCTTGGGAAACCttcaaaaccagtttttgccaagctTGCAAAGC
TGGGAACATTTTCTATAAAGTATTGAAGGGGTAAGGTCACTTTAATCTAG
TGAGCCCTTTGAAAGTcattttttaagtttcttaATGACCAAAACTGATA
AAGCTTGAAGATTAGTTCTCCAAAATGGAATCATTTGCTCCATTTGGTTG
ATTAGTTCTCCGCAAATGGACTTCAATTTAAATGCAAATTTTTATgctaa
ggcgaaaataaaaaaattagtgtttccggaatgcgggtgaaggaaaaagc
TTTCaagcggccggccggaaaaattttttttttgctatttttgataactt
aaaatcattgaaatagaactttaaagataactttcaTGTACactacaaac
agtatgaagtaagccctgaatactattgtatcaactactaacgaacaaaa
attaatttacaGCGGGAaatctaaccaaacgacgtttgatagcttgaacg
gtcaacttgatttatttattcttgattttcatagtctgcggccgggttag
aaaaaaaattatatttttcacccggccggtttctggaaacactacatttt
tttattttcgcctaacgTCAGCATTCTTAAGATAATTTAGTGCAGATAAA
AATTTAGAGTCGctttgcaaaatttgagcaaaaaaaaaattaaagtggaA
AAAGTTTGGTCCTTTATTTGATTATTCAAAAAATGATGGCGTCATCAGGT
AGCAATGTAGTTATCANGTTTGGTCCTTTATTTGACTATTCAAAAAATGA
TGGCGTCATCAGGTAGCAATGTAGTTATCATAATGGGCTCCTTCCTGAAA
ATGTCTGCACATGGGGTTTAAGGatagtgtccgggggtagtgaaaatttt
tttaagatttgccTTGTCTGGAGGGGTAATTCTGCTCTGTTTGAGGATAA
TTTTGAATGTCTCTTGCAAGATTTCAATTTAGtttgataaatatttcaat
CCGGTTTGTACAAAATTATGAATTATTGTACCGGGCAACTACTGCATTGG
TCTAACTTAACCGAAATTTTTCGAGCAAGTAGTGTGTTGTTGTCTGATGT
TATAATgatatttgaaaagtttttattgtGACTTTGGTAAGTTTAATAAC
ATATAGTGTTTCCTTAACGAACGATTGTGTTGCTATGCACGTTTGACAAC
CGTGACGATGCAGAAGATGCTATTCACTATCTGGATGGGACCAATTTCTT
TGGTCGAAATCTTGAAGTCACTCTCGCTCAAGGAGACAGGAAAAGTAAGT
TATCATCGCGTtggtctttaaaaaaaataatttatagaaaatattttttt
tggttcatAACTCCTGATACCCGCTAATTGATTGATAACTTCTGAGGGAT
ACATGTGAATTTTCTTGAAATGCAGAAATACTCGAAAGCCTAATACCAAA
TTACAGGCACTCTAGAAACCCATCTGGGGTTTCCTTATACTTGGCCATAG
AGGAATGTTTAAGTGTGAGTATACATTGTTAACATTTTCTCTTTACACTT
GTTCTTTCAGCACCTGGTCAAATGAGATATAAAGATGGCGGCAGTGGTGG
TGGTGGAAGGAGGTACTTATTGTTTTATTGTGATGTGAAAATAATAACCA
TAAATCACGCCTTTGTTAGGGGGTGGTGATTTCGAAGGGGAATAGATGTA
TATCCTACTGTTTTCTTTAGTCTGGGAGCAGAATCGAGAAATAGCAATTT
TGCTCAACCCAGAAGGTGAATGGGATTGTTATATATCGTTGGAACgaaaa
ttttatgctgattatggaaacccgggtcttaaaaagtctatcctggacaa
aattgcatacgaggctggagtttgcactccttcgtggtgttttttcgatt
ttacttgttttagaaaattgcttactgtcagcaaagtaaagggttttaca
atttcattttttatgcaaaatgctGTCAACAGAATaagttaatagaaaaa
aattcaaaaatctcaaaagaaaaaatttttgcactccatcttggaggatt
ttggcgaaaaaatcgatgttttttcttaaaattcgtcaaaaactagtcta
taaaccactgaaattattttttcctgctaaaaatactataaaagattAGG
AAAGTATAATAAAATAACGAAAAATTGgctcaaaactttattttgcactc
ccccgttggtgtttttattgaaaaaacgagatttttggtgtttttgaaga
aaatataacattttctggcttttcctttgatctacgactggaaatcctat
ctttctcttagaatcatttttatccaacacaaaatgctaaatattctgaa
aaatgaccctccttcactggggttttaagtcaaaatatagtatttttact
taaaattcgtcaaaaactagtctttaaaccactgaaattgtgtcaaaata
agtgcaaaaatatttccatatttccgCTAAATGTTAAGAATAAAGTATAG
GAAATAGAAAAgtgggctcaaaacgctattttgcactcctccgttggcgt
tttcattgaaaaagaagatttttggtgttttcttATTAGgtttaagtttt
gaaataagCGCCGCACGTCTCAATGCGGTGAAGAGTCTTATCTTCAATAG
CAATTTCGTCCCAAAAACCCAGGCAAAGGAGaccatttttttatatattt
ttagcattcttgtgttggaaaaaaattcTAGGAGAAAACACAGTATTTCC
AGTCGTAAATCGAAGGAAAACCTAAAtagaaaacaccaaaaatcttcttt
ttcaataatgacttaaaaccccagtgaaggagggtcatttttcagaatat
ttagcattttgtgttggataaaaacGATTCTATAAGAAAGATAGGATTTC
CAAATCGTAgatcaaaagaaaatctagaaaatgttatatctttttcaaaa
acaccaaaaatctcgttttttcaataaaaacaccaacgggggagtgcaaa
ataaagttttgagccaatttttcgttattttgttatactttccTAATCTT
Tcatagtatttttagcaggaaaaaataatttcagtggtttattgactagt
ttttgacgaattttaaggaaaaacatcaatttttcgccaaaatcttccaa
gatggagtgcaaaaatttttttccgagatttttgaattatttctaTTAGC
CCATTCTGTTGACAGCATTTtgcattaaaaatgaaattctaaaacccttt
actttgctgaaagtaagcaattttctaaaacaggtaaaatcgaaaaaaca
ccacgacggagtgcaaactccagcctcgtttgcaaTGATGTCAATTAgat
agactttttaagacccCGGCTTCCGTAATCAGCATAAAACTTCTgttcca
acggtgtataacaATCCCATTCACCTTCTGGGTTGAGCAAAGTCGTCTAT
AACTCGAGATTTTGAATTCTGCTCCCAGACTACTTGTGAAGAGTTTTAAA
AAGGAAGAATTTTGCccaataaaattattttcaccaattttagTGATGCT
TTTGAGTtctataaactttcgcgaatcgcctctttaagaatattcaaata
catttactttcgcgaaaaaggccaaaatttgcgaaaatcgcgaaagtttc
tgctcgcgaaagtttgtacgtctaAGTATTTAGAAGTCAAAAGACTGATC
TTGGAAAGTNtttgcgaaaatcgcgaaagtttctgctcgcgaaagtttgt
acgtctaAAGTATTTAGAAGTCAAAAGACTGAACTTGGAAAGAGTGTAAA
CCTTTCGAATCAATATTATTCAAGGTTGGGGTTCCAAGAAAGAGAATAAA
TAATGACCTGTTCTTTGTGGATGTGCAACCAAGGAAATAACAGCTTCAAA
TATAACATTGGTTATTCTGTTCTAGCCCTTCGTAATTTTGCTCGTTTGTC
ACTATTGATAAAGCACTTATTACAAAGTTAATTGGTTTAAAATAGCTgtc
ttcttttctctttttagacGAAGAAGTTATTCACGAAGCCGTTCGCGATC
TCGTTCACGAAGTCCTCGCCGAAGACGTCACTCACGTTCCAGAAGTCCTC
CGCCACGCAGACGTTCACCGCCAAGACGAAGAAGTCGTTCCCAGTCACCG
CCAAGGCGAAGAACGCGTACGCCAAGTCGGTCACGTAGTCGAAGCAGATC
GAGATCAAGAAGTCGTAGTCCTAGCCACGATCGGCATCGAAGCAGATCCA
GATCGAGGTCCAGATCGAGGAGTGTATCTCCACAACATCGTAATTAGAAG
TTTAACACGTGACTTTTGTTTAGCGAAAGTTAAAGTTTTCTCgactttta
tcttttatttttatggCTTACCTATTtgtaaataaattcatcatATCGAA
GATGCGTTGAAAGAAAACTTGAATAGCACTTAAAAGCGAACTTTTAGTCA
ACTATCATTGGTTTCTAATTGTATCCTCATAGTCTGGATTATGATCACCT
TTAC Coding sequence (CDS) from alignment at sc0000162:147176..162329+ >TCONS_00013080 ID=TCONS_00013080|Name=TCONS_00013080|organism=Clytia hemisphaerica|type=CDS|length=3015bp|location=Sequence derived from alignment at sc0000162:147176..162329+ (Clytia hemisphaerica)
ATGTCAAGATACAGGAAATCAGTTACATCAGTCTACGTCAAAAACATTCA
TAATGAAGTCagGCCGGATGATCtgcgaaaaatgtttttgaagtaTGGAG
ATATCAGTGATGTGTACGTTCCACTTGATTATTTCACTCGCGAACCTCGA
GGATTCGCTTACGTACAGTTTGACAACCGTGACGATGCAGAAGATGCTAT
TCACTATCTGGATGGGACCAATTTCTTTGGTCGAAATCTTGAAGTCACTC
TCGCTCAAGGAGACAGGAAAACACCTGGTCAAATGAGATATAAAGATGGC
GGCAGTGGTGGTGGTGGAAGGAGacGAAGAAGTTATTCACGAAGCCGTTC
GCGATCTCGTTCACGAAGTCCTCGCCGAAGACGTCACTCACGTTCCAGAA
GTCCTCCGCCACGCAGACGTTCACCGCCAAGACGAAGAAGTCGTTCCCAG
TCACCGCCAAGGCGAAGAACGCGTACGCCAAGTCGGTCACGTAGTCGAAG
CAGATCGAGATCAAGAAGTCGTAGTCCTAGCCACGATCGGCATCGAAGCA
GATCCAGATCGAGGTCCAGATCGAGGAGTGTATCTCCACAACATCGTAAT
TAGATGTCAAGATACAGGAAATCAGTTACATCAGTCTACGTCAAAAACAT
TCATAATGAAGTCagGCCGGATGATCtgcgaaaaatgtttttgaagtaTG
GAGATATCAGTGATGTGTACGTTCCACTTGATTATTTCACTCGCGAACCT
CGAGGATTCGCTTACGTACAGTTTGACAACCGTGACGATGCAGAAGATGC
TATTCACTATCTGGATGGGACCAATTTCTTTGGTCGAAATCTTGAAGTCA
CTCTCGCTCAAGGAGACAGGAAAACACCTGGTCAAATGAGATATAAAGAT
GGCGGCAGTGGTGGTGGTGGAAGGAGacGAAGAAGTTATTCACGAAGCCG
TTCGCGATCTCGTTCACGAAGTCCTCGCCGAAGACGTCACTCACGTTCCA
GAAGTCCTCCGCCACGCAGACGTTCACCGCCAAGACGAAGAAGTCGTTCC
CAGTCACCGCCAAGGCGAAGAACGCGTACGCCAAGTCGGTCACGTAGTCG
AAGCAGATCGAGATCAAGAAGTCGTAGTCCTAGCCACGATCGGCATCGAA
GCAGATCCAGATCGAGGTCCAGATCGAGGAGTGTATCTCCACAACATCGT
AATTAGATGTCAAGATACAGGAAATCAGTTACATCAGTCTACGTCAAAAA
CATTCATAATGAAGTCagGCCGGATGATCtgcgaaaaatgtttttgaagt
aTGGAGATATCAGTGATGTGTACGTTCCACTTGATTATTTCACTCGCGAA
CCTCGAGGATTCGCTTACGTACAGTTTGACAACCGTGACGATGCAGAAGA
TGCTATTCACTATCTGGATGGGACCAATTTCTTTGGTCGAAATCTTGAAG
TCACTCTCGCTCAAGGAGACAGGAAAACACCTGGTCAAATGAGATATAAA
GATGGCGGCAGTGGTGGTGGTGGAAGGAGacGAAGAAGTTATTCACGAAG
CCGTTCGCGATCTCGTTCACGAAGTCCTCGCCGAAGACGTCACTCACGTT
CCAGAAGTCCTCCGCCACGCAGACGTTCACCGCCAAGACGAAGAAGTCGT
TCCCAGTCACCGCCAAGGCGAAGAACGCGTACGCCAAGTCGGTCACGTAG
TCGAAGCAGATCGAGATCAAGAAGTCGTAGTCCTAGCCACGATCGGCATC
GAAGCAGATCCAGATCGAGGTCCAGATCGAGGAGTGTATCTCCACAACAT
CGTAATTAGATGTCAAGATACAGGAAATCAGTTACATCAGTCTACGTCAA
AAACATTCATAATGAAGTCagGCCGGATGATCtgcgaaaaatgtttttga
agtaTGGAGATATCAGTGATGTGTACGTTCCACTTGATTATTTCACTCGC
GAACCTCGAGGATTCGCTTACGTACAGTTTGACAACCGTGACGATGCAGA
AGATGCTATTCACTATCTGGATGGGACCAATTTCTTTGGTCGAAATCTTG
AAGTCACTCTCGCTCAAGGAGACAGGAAAACACCTGGTCAAATGAGATAT
AAAGATGGCGGCAGTGGTGGTGGTGGAAGGAGacGAAGAAGTTATTCACG
AAGCCGTTCGCGATCTCGTTCACGAAGTCCTCGCCGAAGACGTCACTCAC
GTTCCAGAAGTCCTCCGCCACGCAGACGTTCACCGCCAAGACGAAGAAGT
CGTTCCCAGTCACCGCCAAGGCGAAGAACGCGTACGCCAAGTCGGTCACG
TAGTCGAAGCAGATCGAGATCAAGAAGTCGTAGTCCTAGCCACGATCGGC
ATCGAAGCAGATCCAGATCGAGGTCCAGATCGAGGAGTGTATCTCCACAA
CATCGTAATTAGATGTCAAGATACAGGAAATCAGTTACATCAGTCTACGT
CAAAAACATTCATAATGAAGTCagGCCGGATGATCtgcgaaaaatgtttt
tgaagtaTGGAGATATCAGTGATGTGTACGTTCCACTTGATTATTTCACT
CGCGAACCTCGAGGATTCGCTTACGTACAGTTTGACAACCGTGACGATGC
AGAAGATGCTATTCACTATCTGGATGGGACCAATTTCTTTGGTCGAAATC
TTGAAGTCACTCTCGCTCAAGGAGACAGGAAAACACCTGGTCAAATGAGA
TATAAAGATGGCGGCAGTGGTGGTGGTGGAAGGAGacGAAGAAGTTATTC
ACGAAGCCGTTCGCGATCTCGTTCACGAAGTCCTCGCCGAAGACGTCACT
CACGTTCCAGAAGTCCTCCGCCACGCAGACGTTCACCGCCAAGACGAAGA
AGTCGTTCCCAGTCACCGCCAAGGCGAAGAACGCGTACGCCAAGTCGGTC
ACGTAGTCGAAGCAGATCGAGATCAAGAAGTCGTAGTCCTAGCCACGATC
GGCATCGAAGCAGATCCAGATCGAGGTCCAGATCGAGGAGTGTATCTCCA
CAACATCGTAATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013080-exon-sc0000162-1491911889:147176..147436 | TCONS_00013080-exon-sc0000162-1491911889:147176..147436 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1510915933:147176..147436 | TCONS_00013080-exon-sc0000162-1510915933:147176..147436 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1575043694:147176..147436 | TCONS_00013080-exon-sc0000162-1575043694:147176..147436 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1491911889:156628..156732 | TCONS_00013080-exon-sc0000162-1491911889:156628..156732 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1510915933:156628..156732 | TCONS_00013080-exon-sc0000162-1510915933:156628..156732 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1575043694:156628..156732 | TCONS_00013080-exon-sc0000162-1575043694:156628..156732 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1491911889:159016..159119 | TCONS_00013080-exon-sc0000162-1491911889:159016..159119 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1510915933:159016..159119 | TCONS_00013080-exon-sc0000162-1510915933:159016..159119 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1575043694:159016..159119 | TCONS_00013080-exon-sc0000162-1575043694:159016..159119 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1491911889:159386..159437 | TCONS_00013080-exon-sc0000162-1491911889:159386..159437 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1510915933:159386..159437 | TCONS_00013080-exon-sc0000162-1510915933:159386..159437 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1575043694:159386..159437 | TCONS_00013080-exon-sc0000162-1575043694:159386..159437 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1491911889:161843..162329 | TCONS_00013080-exon-sc0000162-1491911889:161843..162329 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1510915933:161843..162329 | TCONS_00013080-exon-sc0000162-1510915933:161843..162329 | Clytia hemisphaerica | exon |
| TCONS_00013080-exon-sc0000162-1575043694:161843..162329 | TCONS_00013080-exon-sc0000162-1575043694:161843..162329 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000162 | supercontig | sc0000162:147176..162329 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00013080 vs. Swiss-Prot (Human)
Match: SRS10 (Serine/arginine-rich splicing factor 10 OS=Homo sapiens GN=SRSF10 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 8.903e-32 Identity = 58/101 (57.43%), Postives = 76/101 (75.25%), Query Frame = 2
Query: 200 MSRY-RKSVTSVYVKNIHNEVRPDDLRKMFLKYGDISDVYVPLDYFTREPRGFAYVQFDNRDDAEDAIHYLDGTNFFGRNLEVTLAQGDRKTPGQMRYKDG 499
MSRY R TS++V+N+ ++ R +DLR+ F +YG I DVYVPLD++TR PRGFAYVQF++ DAEDA+H LD GR +E+ AQGDRKTP QM+ K+G
Sbjct: 1 MSRYLRPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEG 101
The following BLAST results are available for this feature:
|
