TCONS_00013129 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00013129
Unique Name	TCONS_00013129
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3538

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000162:433261..448296+

transcript sequence

>TCONS_00013129 ID=TCONS_00013129|Name=TCONS_00013129|organism=Clytia hemisphaerica|type=transcript|length=3538bp
TGAGCTTAATAATCTAAATAGTGTTGTCAAATGATGTAGAGAAATGTATT
AGCAGAGAGCTTCATAAAAACACTGTCTTCCTACTGTACTTGTGAAAGAT
TTTGATGCATGCAATGTCGttatcttttttatttacaGAAATCTCACTAA
CTATTATACTAACTGACTTGAAATAAAATGACGACCAGAGAATAAGAAAA
GCATTACTGTGTGTTtgttatgttttgttttgtgaTCTAAATGTAAACGG
TGGATTGAATATAACTTGTTTGCATGGTTGTGGTACACTCAAGACAAAAT
GGCAGTGGGCAACGGCCAGGTGGAACCTGCAGACAAGAGGAGAGATGTAA
TAAACGGTGTTGTGGAAGACGAAAAAAAACCGGCCATGGAAGCACTCGTC
ATTTTGCGTGAACATGAGGACCAGAGCGataacgaaagtgaaagtagttc
ttcttcctcttcttcgagttcttcatcttcttcttcgaGTGATAGTGATA
GTGAcgatgaacaaaacaaagatattgAAGATTATGGTGATGTCAAGATC
CCCTTCTCACACACCTTTAAATCTGgtaaaattgaagaaaacttCTTGGT
CGGAGTTCCAGTTAGAATCCGAATCAACGAGCGTGTAGTTTCTTATGGAG
CTTATCGCCATCGATTGAACCCTAATCTATATACTGTAGAATTTGTGCAT
GGACGTTTTAAGTGGACCATCAAGAAACGATACAATCACTTCAGAAGGCT
CCGAAACCATTTAGAAGTTTACCATGCAGCACTTATCGTCAAACACCCGA
CAATGGCTATCCGTCTTGAGAAGGTCCCTAAACTTCCCAGAAGGCTGGAG
ATCTCAATACGTTCCAAGAAAAGCAAGAGCAAGCGAATGAAGAAGCTGCA
AAAGTTTCTACAGAAGGTGGTGAATATTGATAGATACAGGAATAACGAAC
ATGTGTTGGACTTCTTGGAGGTTTCACATCTTTCATTTGTCCACGACTTG
GGAGCAAAACACAAAGAACAAGAGGTATTGAAGCGTGCAGGTGGTCATAC
ATTCTCAAAAAGTTTCCTCAAAAATCATATCATTTGGATTTGGCATAAAC
GATGGTTGATACTACGGAACAGCTTCGTGGCATACATCGACAAAGAGAAC
AACAGGATCCGAGATGTCTTACTCTTCGATAACAAGTTCAATGTGTCTTG
TGATAAAACACGGACTGGAATCAAAAATGGAATCATGGTGTCCAACAACA
GGAGGGATCTTGTGGTACGATTTCAATCTGATGCTCAAGCGAGATCATAT
TTTGGGAATATTATAAATGTGATGGGGAAGGAGGGTCGTGATTGGATAAG
AGAACATCGTCACGATTCTTTTGCACCAATAAGAAACAACACACATATCA
AATGGTTTGTTGACGGTGAAGGGTATTTTGCAGCAGTTGCAGATGCCATC
AGAAAAGCGAAAGAAGAAATCTTCATTACTGATTGGTGgcTTAGTCCTGA
ACTGGTATTGAAAAGACCTATTACGGATGTCAAAGCTTGGCGACTTGATa
cattattaaaagaaaaagctGATCAGGGAGTCAAGATCTTCATCATTTTA
TACAAAGAACTAGAAGTAGCTTTACCGATCAACAGTTTGTATTCAAAAAG
AGCATTGACTTCACTTCACCCCGAAAATATCAAAGTTTTGCGACATCCAG
ATCATCAACCGACAAGCGATAATCCTGTTTGGTATTGGGCTCATCATGAA
AAACTTGTTTGCATTGACCAAAAACTCACTTTTATGGGAGGTTTTGATTT
ATGTTTTGGTCGTTGGGATGACCATACTCATCGACTGGTTGACTTTGGTT
CAGCGACACCTAACTTTCTTGATCAAACGTCACAAGCCGTTGTCAATATT
TCGAATCTATTtttggaaactgacgtcatcgATAGCGAATATCATAAACA
ACAACTTCGGAAACTTCCTCAGACAGCAAAGAAATGGTTCATCGGGAAAG
ATTATTGTAATTTCTACATTCAAGATGTGACGGAGGTGGAGAAACCTTTG
ATTGATTTGCTAGATCGAAACGAAAATCCCAGAATGCCATGGCATGATAT
CGCTTGTGCAATGTATGGAGACGCTGCTAGGGATATTGGAAGACATTTTA
TTGAACGTTGGAACTTCACAAAgcatTTGAAATGTAAAGATATGCACGAG
ATCCCATATCTCTTGCCTCGTTGTGAACCAATCTTAGAGCAAGGATATCA
GGATTTTCATATCTCCACGGTGGCTAATGTGCAGGTCTTGCGTTCATCTG
GAGCATGGTCTGCTGGTCTTTTGTCAACTGAACATTCAATCCTCAATGCA
TACAAACACCACATTCGAAATGCAAAATACTACATTTATATCGAGAATCA
ATTCTTCATCACATGTAAATCGGACAACGTAAAAAACACTATTGGCGATC
TCCTGGTCGAAAGGATACTTCTCGCACACCATAACAAAGAAACGTTCCGT
GTGTATGTCGTCATGCCATTGTTGCCATCGTTTGCCGGTGAAATTGGAAC
ATCTGCAGCCACATCACTTCATTTCATTGAATATTGGAATTTACAGAGTG
CTAGAAACATAATCAACACTCTCCAAGAAAATGGAGTGGAAGACCCAACA
GAATACATCACTTTTAACTCGCTACGAAATTATGCTGACTTGAGACACAA
AATGGTGACAGAGATTTTGTACGTGCATAGTAAACTGATGATTATCGATG
ATGAAGTCGTCATTATGGGTTCTGCCAACATCAACGACAGAAGTATGCTG
GGTGATAGAGATTCAGAACTGGCAGTTTGTGTACAAGATGAAAATAAAAC
GCTGCCAGGTGTCATGAATGGAGTGGAATATCGAGTAGGAGGTTTTGCGT
CAACTTTACGAAGGAAATTATTTCAAGAACATCTGGGCTTGTTGAATGAA
CCGTACTATACTGTGGTGGACCCCGTCAGCCAACATTTCTTCAAGGACGT
TTGGTGTCAAAGAGCCCGAAAAAACACTGAAATACTTCACGAGGTCTTCG
GACGAATGCCAAATAACGAAGTCAAATCTTTCGCTGATTTAGAAGAATAT
AAGAAACGAGAATTTTTGGAGACAAAAGATCCAGTGGAAGCACGCAAGCT
ATTAAAGGGTGTACAAGGCTTTCTTGTTGAAAAACCTCTAGACTTTCTCA
AAGATCAGGATCTCTTCCCACCAGCTGATTCTAAAGAATTTGTTGCACCA
TATAAGATTTTTACTTAATTTTTGTGAATATTATTTTCATGACATATATA
TTTTAATATATAAAGGCGGtcttatgtttttatttgacaTACACGCACTT
TAACTTGAAGTAGTTTCACCTGAGGCATTATTTTTCCAGCCCTATCtttt
aagttttgaatttttctccAGCGCCTTTGTTAATTTTTGTTAGAAATTGG
tcgaaaaatattacaaaaaacCATCCTTTCCTGAAAAGTATTTGCTACGG
ATGTCTTTTTCGTTAAAGAAACTTTGCGTTAAAACTCG

Run BLAST on NCBI

transcript from alignment at sc0000162:433261..448296+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00013129 ID=TCONS_00013129|Name=TCONS_00013129|organism=Clytia hemisphaerica|type=transcript|length=15036bp|location=Sequence derived from alignment at sc0000162:433261..448296+ (Clytia hemisphaerica)
TGAGCTTAATAATCTAAATAGTGTTGTCAAATGATGTAGAGAAATGTATT
AGCAGAGAGCTTCATAAAAACACTGTCTTCCTACTGTACTTGTGAAAGAT
TTTGATGCATGCAATGTCGttatcttttttatttacaGAAATCTCACTAA
CTATTATACTAACTGACTTGAAATAAAATGACGACCAGAGAATAAGAAAA
GCATTACTGTGTGTTtgttatgttttgttttgtgaTCTAAATGTAAACGG
TGGATTGAATATAACTTGTTTGCATGGTTGTGGTACACTCAAGACAAAAT
GGCAGTGGGCAACGGCCAGGTAACTTATGTTTTCATTATATGTAATAAAC
CATCTTGAGATTTAAGCTATATCATCATTCGAAGGCTTTATTATTATGTC
GCAAATGTCAACTGAACATTTTCTACATATGACTTTCCTAATAACTGTTA
AATCAAGTGTCTGCTACTGTATCTGTGAACCCAGCTCCCTTGTCAGTTAG
TCATTATGCATTTGAGTGAAATTTGAGACTTTACGCAATAAACGTACGTA
TTTTTCTCATAATCATTGCAAAGTTTGTATAAGTCGTTCATCATTCAATA
AAAACCCCTCTTTATCAGTCGtattaaaactttttatgattGCGGTTTTT
TGTGAATTATGGTTTAACTGTAGCAGAGCAACTATTTCTAACGGTAGAAG
TTGTGTTTTTCAGAAGGGACTTCGAATTTTGAAATCGGTAAGCTGTATTT
TTGTCTGGATGTGTTTCTTTCTCCACACTATAATTTTCACATTTAATGAA
TCGATGGTTATAAAAGTGACTTGACTTTTTAAGTTAGTTTCAATTGTatt
gaaataatttctttaccTTAAACAGTGCTAATTCGACATCGATTATGCCC
CCGGTGATATTTTTCTCTAACTCATCAAACAGTTCAAGATTGCGTTTTAC
TTTTTGGTCTAACATCAAAAAAGTTACTATACAAATTCTAACAGAACAAC
GTAAGATAAACAAAGTCGTGCTAGCGCTgcgatttgtttatttttcacta
TGTAACtttttcacataaaaaaaatctttttcgtaCGTTGTTGAAATTTG
AAGCTTTGTTCATACTTTTACAAATTGTGTGATGAAGATTATTCCAATTC
GTTCATGGATTAAAATGAGTTAACATACGAATATTTTCTCTCTGCGactt
gcatcacttttttaaataatgatTTGTTGTCCAAAAACAGCGAAAAAGGT
ATTCAAAACAGTTTTCCATCGTGAATTTGAATTGAAAGTTCATTCGTGGA
TTAACAGAAAATAGAACTTACAGGCTTTTAGACTTGTAGacacagggggg
gggtcagtgtaccagaaggtggcatgtatcctggggtgggtgggtgtttg
agaaaaaaatttgtcatgtactacctgtgtactataattggggcgttggg
tccaaaatcgaatttgatttttactgcctgtgtaccaaaataggggagtt
gggtccaaaatcgaatttgatttttactgcctgtgtaccaaaatagggga
gttgggtccaaaatcgaatttgatttttactgcctgtgtaccaaaatagg
ggagttgggtccaaaatcgatgttaaaagtgtggaaacaaaaaggttcag
aaattatctgctaaaatagaaatgtaaagttgttctattataaattgatt
aagccaagtttgtccaagatcattcttccaaaattcttgaaatgaattga
aatcctactagatcccactgaaatgaaggtttatcgagtcaatgtaaaca
ttcgaacattagaattcaaacattcaacattggtgccaactctcacgcat
tgggtGTGAGACTCGTGCATTTCCACATGTCTcgcgtaatttttgaaaag
tttgatttctcacgcattttggatttttgagaaaatttttcctgtttttc
cgatttttggaaaatagttttcccgatttcccgatttttggaaaaatgtt
tacccgattttccgattttcggaaaagaGTTTCTTTATTTTCCGGATTTT
TCTAGGTAGTGCCCGGTAGTAaatagggggtatggggtggttttgggatt
tttccatgtagtatggtgtacttcaggggtgggtgggtgtcaagttttga
aaaataccttgtagtacacatacatgccgccttctagtacactgaccccc
cccctggtaGACACTGAGAAGAAGACACTGTTACGAGAAATCTTCTTGCT
TATGAGATGTTTTTATGTTAGATTCATTGTTTTCAAACAGCATTATTTGT
GGttcagaacatttttattcTCCCTCGTCCTGAAGCACAAATTTCTGTTG
ATCTTTGAATATTTATCATTCTTTAGGTGGAACCTGCAGACAAGAGGAGA
GATGTAATAAACGGTGTTGTGGAAGACGAAAAAAAACCGGCCATGGAAGC
ACTCGTCATTTTGCGTGAACATGAGGACCAGAGCGataacgaaagtgaaa
gtagttcttcttcctcttcttcgagttcttcatcttcttcttcgaGTGAT
AGTGATAGTGAcgatgaacaaaacaaagatattgAAGGTGCGataaaatt
cttttcaaaaatatgatccgttattattattatcatttatAGGTAATTCA
TCCCGAAATGAGTGCCCCTgaaaataaagctttttttattctttatatTC
TTTATTTGGGGCTTCTCTGCCATTTTTTCCTCGTGTTTGGATCTCATTTG
ATTTCGACCCATAAAATAATGTCAAATCTCTGCCTCATTAATATTAATGT
TATGCTTTTGAAGTATCCTACACCGCAACCTGACTTAACATTTTCTATCA
TTTTCTTTTCGATGTTTCTACCAATCAATGAGCCCTTTTGGGAAAATCTA
ATGTTAATCGACGACTGTATTGGTGTAGCCTAGTGCTTTGACCGTTTATA
TTATTACTTTTTACTATTATTTATTTGGGCTTTTGAAgcttaatttttca
tttcaccAATATTAGATTATGGTGATGTCAAGATCCCCTTCTCACACACC
TTTAAATCTGgtaaaattgaagaaaacttCTTGGTCGGAGTTCCAGTTAG
AATCCGAATCAACGAGCGTGTAGTTTCTTATGGAGCTTATCGCCATCGAT
TGAACCCTAATCTGTAAGTCCATTATCTATCCTGTAAATTATGTTTCATG
TTTTATTTTAAACGATGCACTTAGGAAAAATTAACGTTCTTTGAGCAGGG
TAGACtagaactttgctttttgataattttcgacGGCGCTGAGTCCAGTA
AAGTAGACCAGGAGCTCTTGACGAGGTCGTCATTAGGAAAGAAGAAcact
aaaaatccaaatatttttactttccaAGAACGACCCGGTGAATTTTTTTC
GTTATGAGAGCGAGGAGCAGTTAAAGAAAGCTAAAGATTTGTAACATTGA
TGGGAATCTGATCTTTATTTTAACTATCGCTACTTTAGATATACTGTAGA
ATTTGTGCATGGACGTTTTAAGTGGACCATCAAGAAACGATACAATCACT
TCAGAAGGCTCCGAAACCATTTAGAAGTTTACCATGCAGCACTTATCGTC
AAACACCCGACAATGGCTATCCGTCTTGAGAAGGTCCCTAAACTTCCCAG
AAGGCTGGAGATCTCAATACGTTCCAAGAAAAGCAAGAGCAAGCGAATGA
AGAAGCTGCAAAAGTTTCTACAGAAGGTGGTGAATATTGATAGATACAGG
AATAACGAACATGTGTTGGACTTCTTGGAGGTTTCACATCTTTCATTTGT
CCACGACTTGGGAGCAAAACACAAGTGAGTAGCTTCTGTGTTTTCTTTTA
CCATTGTTCCTAGTTTGTGTGATAAGATGTTAACAGTTTTTGATGTCACA
CGTTTATTACATATcttcttttttggacctacctcggtggggtagaggtc
ctacaaattaactgatgttcgttcgttcgttcttacgttcgttcgttacc
aacttttctcgagattggctcattagcttttcctgatttttggcacaaag
atgctaAATGgtaatacccaaaatgtgacggagcccgattttcgaaaaaa
aatcatttcaacggttttttgacattttctcgagatttcatctttagttt
tttctgatttttcgcacaaagatgcgtaatagcaatgcccaaaacatggc
cgagtccgattgttgagaaaaattcttttccggccgaaaatcgccgtttt
tgcagatttgagtCGACACTCCACATTGACCCCAACCTAAACCCTTTCAA
ATCAACTTACAAGTTTTGACTATTTCATTTTCCGTACTTCTCACTTAGAG
AACAAGAGGTATTGAAGCGTGCAGGTGGTCATACATTCTCAAAAAGTTTC
CTCAAAAATCATATCATTTGGATTTGGCATAAACGGTAAACTTTTCACTC
AAATTGCTTTCCTTGCtactctttttttaaacatttaaagcGAAATCGGA
TGCTATTTTAGCTAAAtgctcaaaaaactttcatattTACTTAAAGACTT
GAAGATTCTTTGATTCCCTTGACTTTGAAGAAACTTTCAACGATCAAGAT
TTAAACTCCTTTTTCACTGTTTCGCCTACAGATGGTTGATACTACGGAAC
AGCTTCGTGGCATACATCGAGTAAGTACCCTCTATTTGCTTTTGTCATCC
TTTTTTTCTATATCCTGGTTGAactaatctcataacagatcatccattcc
gCTTTGCTCTAAAGGGGCATGTGACGATCTGACAGCCAAAACGTTCTTAA
CAGCCAAAACGTTCTTAACCGCGTTGTCTTTTACTCGGAAACGAAAGCGA
CTCGGTTCTAATGtttatcattttattgtttacgATCGACTTTTGTTTTG
GTGCGATTCAACCAATCACTGCGTTCAAAAGCTTCTTTAATATTCATCCA
AATTTGGACGAGAAAGACCAAAGCGGTCCTCCAACCCGGGCAGGATTTTT
TTGAATCATGGCCTTAAGAGTGCATACAAACCAGCGCCGAGAAttcagaa
tctgctcggagagTACTGTTTCACTGACAAACCCgatttattctcaactt
cagttgagttagaatctgagaatgtgtgtgtgtgtctgtgtgtctgtctg
tgtgtgtgtatgtcccaaaacttcggggcagcctggagacttcaaaaatt
gttcgatttggctgaaattttgcacacttgttccctGGGTGAATATCTTA
GGGtgctttttgtatttttcaaaaattttgatttttggggcctgggaacg
agtttttttgccaaaacgaggctaaagctttagagcagtctacaggcctc
caaaatgatcagatttggttgaaatttggcacacttgttcattgggtgaa
tatctgggggtctacaattgggcctatgattgatttgaagccactgaagt
tgagcccagtgcgttgcacACGTCCGACTATTTGCGATTGTCACTGCTAt
tgttattatttattataaacCAAAAAGATTAGATGTAACCTGCAAACTTT
TAAAAGGAGACTATTTTTTTGTAGCAAAGAGAACAACAGGATCCGAGATG
TCTTACTCTTCGATAACAAGTTCAATGTGTCTTGTGATAAAACACGGACT
GGAATCAAAAATGGAATCATGGTGTCCAACAACAGGAGGTTAATATCACT
ATTTCTAACTTTCTGTCTCATACAAAAATGTCATAGTTTTTCTACTTGAA
TCTTAATTATCTTACGGTatataaaaattacaattttatgaaaataaatt
agCCGGGTGTGTAGGGAGGATGTACAATGACAATGATAACAAACCCTATT
GTGTATGTAAAACGTTCCATCTATGTGATTTTTTAGATGTCCCACAGCAT
TATTGGTTACTTCCGTTGAAATGATTTCGAACCATTTCAAATTTTAGGGA
TCTTGTGGTACGATTTCAATCTGATGCTCAAGCGAGGTATTTCTTTGCAA
AACTCCCCTTGGATTttaggaggggtgtttattaaataatttataaACAA
GGTCACTTTAGTAACGTGAATGGGAACCTTATTTTGCCTCTTCATTATTA
TTTTAGTACAACTTTGTCAATTTAGGGACCTAGAAATAGGTCAAAACCAG
TTTGAATACAAAAAGAATTCAATTATTGTTGTATATATAAGTTTTTCTTC
GTATTACTTCTTTACTGCTACCtatttcaaataaacgccctaTCTAGAGG
GAGGCATTGATTTGGAGGGggtgtttatttgagggggcgtttattgaaaa
tttttctttaaaggaGGAGCATTCATTCGAATAGGggagggcgtttaaaa
gaagggggcgtttattcgaagtaatacggtaactGGACAACCTATAAAAT
AGATCGATTTTTAAAGATTCGAAATTTATCCTTTTGAaagtgaaaaagat
ttttgttgcAGTTGATGATATAGCATTACATTATTAATCttattcttttt
ctctttctttagATCATATTTTGGGAATATTATAAATGTGATGGGGAAGG
AGGGTCGTGATTGGATAAGAGAACATCGTCACGATTCTTTTGCACCAATA
AGAAACAACACACATATCAAATGGTTGGTATCTCTCTTAAGTGTTCAAGG
GTCGCTCTTGCTACTAACGTTCATCCCGTTTGTTAATGCCCCGTTTTACT
GTATCCTTTCAAACTTTATGTATTTCTAGATGACCCTTTCAAAGGCATTG
GGACTATCGAAAAGTCATTGAAATGAGATATACCACTTGTCTCTGaaatc
ttgatttgatttttcagGTTTGTTGACGGTGAAGGGTATTTTGCAGCAGT
TGCAGATGCCATCAGAAAAGCGAAAGAAGAAATCTTCATTACTGATTGGT
GGTGAGTATATTCTTTAACCACTCATTCActtcatttatatttttcacTC
ACTCATTCATGGAAGGAACTATTGTCGGTGTTGTCGTTTCAgacattgaa
attttcaggagtgcCCTGAAATAAGTTAGTTTACCCATACAAAATTTAAA
GTCGATAGCACAACTAGAGCACcctacgtcaaaatttgaaatttatggaA
GCTTTTTTTGGACCATCCGGCATATCTTCAATTTGATCAAATTAATCATG
AAAGCAATAAAGAACTGTTTATGAAGCCCAAAATCCTCCTTTCCaaaaga
atatgtttaacaTCGGAACCCAAAAACTAGCGaaccaatcttgagaaaaa
ataCGACAAGAGTTGGAAGCTTTATGTTGTAAGGGTATCTTGTATGATGC
CGTATTATAGAActaaaagaaatttcttttttaggcTTAGTCCTGAACTG
GTATTGAAAAGACCTATTACGGATGTCAAAGCTTGGCGACTTGATacatt
attaaaagaaaaagctGATCAGGGAGTCAAGATCTTCATCATTTTATACA
AAGAACTAGAAGTAGCTTTACCGATCAACAGTTTGTATTCAAAAAGAGCA
TTGACTTCACTTCACCCCGAAAATATCAAAGTAAGTTTTTAAACATGCTN
CATTGACTTCACTTCACCCGGAAAATATCAAAGTAAGTTTTTAAACATGC
TGGTTCAAATTGCCATAAGTGTCTctcgaaaaataaatttacaaaacaTT
CAGACAAAGAGAACTAATATTGATCAATTTTCTCTGTCCTTCCTTCATCA
GGTTTTGCGACATCCAGATCATCAACCGACAAGCGATAATCCTGTTTGGT
ATTGGGCTCATCATGAAAAACTTGTTTGCATTGACCAAAAACTCACTTTT
ATGGGAGGTAAGTTGGATCTGAATGTGGAATAATGACCAACTGTGACAAA
GTCTTTCGGGGTACTATTTGAATCTGTCAGGAAAGGTCTAAATAACGTTG
TTGTGTTCAGAAAACAACGTAATACTTTTCAAGTACTTGCACTCATTAAT
TTTTCCCCGATTGCATGCAGGTTTTGATTTATGTTTTGGTCGTTGGGATG
ACCATACTCATCGACTGGTTGACTTTGGTTCAGCGACACCTAACTTTCTT
GATCAAACGGTAACTATGTCTTAAAGTACTGAAGTTTGTAGATTTCTCAT
ATCTGTATTTGCGAAATTTTTTATCACGCTCGATCAAAGTTCGTTTGGTC
ATAAAAAAACTAGATTATACCCTTTGATGCATAATTCGTAAAAATCTTTG
CCTTACAGTCACAAGCCGTTGTCAATATTTCGAATCTATTtttggaaact
gacgtcatcgATAGCGAATATCATAAACAACAACTTCGGAAACTTCCTCA
GACAGCAAAGAAATGGTTCATCGGGAAAGATTATTGTAATTTCTACATTC
AAGATGTGACGGAGGTGGAGAAACCTTTGATTGATTTGCTAGATCGAAAC
GAAAATCCCAGAATGCCATGGCATGATATCGCTTGTGCAATGTATGGAGA
CGCTGCTAGGGATATTGGAAGACATTTTATTGAACGTTGGAACTTCACAA
AggtattgattgattgattgatagaAATTACTCTTTAATTGGCTGTCCTT
CTTGAGAATATAAAGATGTTTCTCATtagtcatttttaattttttttttg
actttttccttaaaacaatattttgttttttgttttcagcatTTGAAATG
TAAAGATATGCACGAGATCCCATATCTCTTGCCTCGTTGTGAACCAATCT
TAGAGCAAGGATATCAGGATTTTCATATCTCCACGGTGGCTAATGTGCAG
GTATATTGAATACATGCATTTCTTTGGATCCGTGGCTAGCTTAACTATGT
CGGCTTTCGCAGTAGATGGAACTAgcagaaagtcaaaaacatctTTCATT
CGTAGTCCTCCTTTCTAATTATATTCTTTCAGCCATGATTTAAAGGGAtt
gaaatgctttctttttgGGGGCAAATAATAAGATAGGTGAGAACTAAAAG
TAAAATAATATCCAGTAATTGAAAATACAAATTCAGTTAGTGGAGTATTA
TTGTGAAtgaattcaaacattttcctaatcaaaacaaaccaacagtttga
aaatcaatcaacaattttgatgaaagaaaacaaaatcatgaaatagaTGA
AGCTTTACCATTTGGAAGTGAATTCAGCATGCTTACCTACTACTTTCTGA
TTCCTGCATTCATTATTGGAAGTTTTGGCAATTCTCTTATCATAGTTTAT
TTCGTCAAATCGCAAAAACATGGAATCAGGAAAATGTCTGGCTATCATTT
TCTTATCATTCAGCTGGCTATCGCAGATCTGGTTGTTTCTTTCTTTGCTC
CTTTATCctcatttttaattgaaataaaaattctgACAAATTTGGGAATC
GATGGTTTTGTTTGCCCCACGAGTTTATTTTTCACGATGGCTTTTCCAGC
AGTATCGTGCTGGTTGTTGGTTTTGTTATCTTATGAAAGACTTCGAACTA
TACTCCACCCCTTAAAAGCAAAGATAACTAAAAAGAAACTTCAAATGACA
TGTAGCCTCCTTTGGGTGTTTTTTATTGTCACTTCAATCAAACGATCGAT
GAAGAATGAAAAATTGGCAAGAAGCTGTTCACCGATTAAGATGGATATCG
AAATTTTAGTTCACCTCGTTTTTATCGTTGCTATGGATACCTTTATTCCG
GTGGCTTTAATGATCATCTTCTATCGAAAAATGTCAACGAAATTGCGATC
TGAAGAAAATCCTgcaaatcaattttcttttcgaaataaTCGCAATCAAC
GACGTAAAAAGCAAGCATTGAAGACGATAGTCTATTTAAAGATTATTTAC
GCGTGTTTTCAAGCCCCTGGAAGAATCGTTGCGTTTGTTCTATATTTCAT
TATTGCTTTTGATCCGAGGCTCATTGTCTCTTCTTCCACTCCCAGATATG
TTTTCCATATTTTGAACACGTATGTTGTAATTTGGGTCTACATTAACAAT
TTTGCTAACGTTTTCATCTATATGGCGCTAATCAAAGGATTTCGAAGATT
TCTGACCTCTCTCTGTTGTCCTTGTCGCACACAGCAAAAtatagaaagag
aaaaacagaaaacaataACATCTTCAGGAAACTTTCAAGAAACGGCAATA
TGAAAGACACGTTACTTTTTTAGCATGGGaaggattgaatttttttctca
gtgaAAATTAATATAAAATCTTGTTGTTATTAACTTTACGAGGAATGACC
TCTTGCTTAATATACTACTTGTgaaccaaattttttttatcgttTCTAAA
GAATTTATATCAGTTTTATgattgacttttaaatttcatATGCCAAAGTT
TGGCTTGCCTCTTACCAATGAATAAGGAATCAAGCATACATTACAATATC
TCATCAGACATGTTTCTATACCTTGTTTTTGGTGCATCCGGTATATGTTG
ATGATTACAAAATTCGATAGTTTtccactttgaaaattttgaaaataatt
ggtttaaaatttttaggtTTTCTTCAGTGCCTTGGAGGATATCAGAATGG
TAGtgtatctcaaaccatctgattgtCTCTTTAAGTTAGCAGTAATTTGC
GGTCATCAAAAACCAGCAAAAAGCAATATTGCGATTGTAATGTACTTTTT
CATCATTTCAATTTCTTTGCTTCAGGTCTTGCGTTCATCTGGAGCATGGT
CTGCTGGTCTTTTGTCAACTGAACATTCAATCCTCAATGCATACAAACAC
CACATTCGAAATGCAAAATACTACATTTATATCGAGGTATAAAACTACAT
tccttagctctagtttagacggccgattttctgccctgcctatattctaa
ttgttagagtaggcagaaggttggcacaaagttggcagttaaaatctatG
CTTGAAACAGATTGAaaaaagacattgcattgatgTCAAAAAGGGCATTG
TATTGACTTTAGccagcccactttatgccaactttaattcacaattagaa
taggcagggcgaaaagtgggctgtctaaactaGAGTTTACATACGAAAGT
GTGATTTGCCTCACAAAACAAGTTCTAATGTTTGATGCAATTTTACTAGA
ACCAGTGcaaaaagctttgaaaataattatacaGCTTTTTTGACCCAGGC
ATTTTCTTGAAACCAATCAGTTACTTGGCTGACATTCCCTCGAGAAAATA
TGAAACGagaattaacgaccttattacGTCAGCGACGAAGAAATAACGCC
AAAAAGGCCCGATAAGGTAATAAGAATGCTTTAGAATGTAATTCTTTTTA
CGCATCAGAATCAATTCTTCATCACATGTAAATCGGACAACGTAAAAAAC
ACTATTGGCGATCTCCTGGTCGAAAGGATACTTCTCGCACACCAGTAAGT
TTTCTTCTGACAGTTTCTTTACTGTCCTAAATCTCATTTCCATTATTTAC
ACCTTACTGAATTGTGATCATAGACAttaaatacaaaactttttccAACG
AAGTATTTGAACTTTCGAATCTCAAGCTTCATTTAAACAGAAATAtgtta
agggaagaaattttggttgaaagaaaatatGGTGGGTTCGTCTAAAATCC
AGCAAATTATATTTCCcaccaaaaataaattttcaagccaaatcaaattc
gtcctgaaaaaaactttttcgcccatccgccaaattaaagtCCCGCCAAA
ATCTTTCCCTTAAGGTAACCTTTCCGCCATTATATTCTTTCAGTAACAAA
GAAACGTTCCGTGTGTATGTCGTCATGCCATTGTTGCCATCGTTTGCCGG
TGAGctgtttttcttcttctatGTAATTATTTGATATCGAGTACGTGTAT
TACGGACTTCTTAAATGTTTTACAGACTAAAACGTTGAACTCTCTTGAGT
GTATGAAAAACCTCTCGGTTggaatttatatattttatttattttatctt
CATATCATTTTGTTGTATGTAGGGAGGGTTATCATTTTTCAACTCTTTCA
TTCTGTAGGTGAAATTGGAACATCTGCAGCCACATCACTTCATTTCATTG
AATATTGGAATTTACAGAGTGCTAGAAACATAATCAACACTCTCCAAGAA
AATGGAGGTATGTGCTTGAATTATATATCCCTTTTAATCAGTAAGTTTAA
TGGTTAGTGAACTCGAACTATATACTACGGTGGCAGAGGAGGGATACTCA
AAATAAGAAATGCAGCTCATTTGAATTAATGAAAGTCTGGGGCCActaga
aacatttgaaaactgaaacacGAAAAGTGTtacaatttgataaaaaaagt
tgttAGTGGCCCCACCCacgaaaaatgtttcaaaaaattcatcaatagtT
TCTGTTTAGATAGAATCACAACACCTGAAACTAAGCTACCAGCTTTACTC
GTGATtgattcattcatttattctgATTGTTTTAGTGGAAGACCCAACAG
AATACATCACTTTTAACTCGCTACGAAATTATGCTGACTTGAGACACAAA
ATGGTGAGTAAAGTCCCGCCTTCTGATAATCATATCATGCGCTAGATGTC
TTGAAGGTTtcaagctgaaatttggcatatTCACTGTCATCGTGACTAAC
CATCAGAAAAAAGCGTGTTTCAGCTCCTAAGGGAAGTTTGTTGATGCGAA
ACGATGATTTCACTGGATTTCATGTTTTTAGGTGACAGAGATTTTGTACG
TGCATAGTAAACTGATGATTATCGATGATGAAGTCGTCATTATGGGTTCT
GGTAAGTCTGTTCTTTCTTTTAAGGATGATATGTTTGGAGTTCTCgtcat
ttttctttaatttgtcGAGCACAACAATTCTTCgccacggcatgacgtca
gaATTGGGGTGCAAtagaacacttactaaagactaattatgtgttttcag
taaacaatcttttagtgagttaaatatttttgaccaacGAACCCTTCATT
TGGCCCTGAAAATAATATTAAGCTACCGATTTGACCAGTCCACCCGACTA
ATTCCATAATAACTAGGATGCCTAAGGATACCAAAAAACCACCCTAGGCT
TACTCCCTCCTCCGAAGCCGAAATGTCGAATTCTGGGGTCGTAGCTGATG
GGCTaatagtgtttgttttaccctcgaaattattaaatcttattggttga
aaaagatgtcacgTGACTTTCCGTGGCATAGAATAGCTTAACAGCTTTTG
TTATCGTATAGTCCCAAGTTCCTTGATGGCCCCTTTAGGtaattcaaaaa
atcatcatgCATCTAAATATAGTTTTCTCTCTATTGTATCGTCTCCTTAA
ATGAAATTCTTCCCTTCTTTCAGCCAACATCAACGACAGAAGTATGCTGG
GTGATAGAGATTCAGAACTGGCAGTTTGTGTACAAGATGAAAATAAAACG
GTAAAAAGTCAACATGTTTTTGCTTCAGCGTCCTGAAAAACACGACTCAA
TCTTCTATTTTTAAGCTATGGCCTGCGGGCAACGATGCGGAGAAATTTTC
GATTGTTTCGATTATAACAAGTCTTTGTTACTTTCAGCTGCCAGGTGTCA
TGAATGGAGTGGAATATCGAGTAGGAGGTTTTGCGTCAACTTTACGAAGG
AAATTATTTCAAGAACATCTGGGCTTGTTGAATGAACCGTACTATACTGT
GGTGGACCCCGTCAGCCAACATTTCTTCAAGGTAAGCTTCTCTTTCAGTG
TGTATGATGGTCGCTTGTAAGCGAGTTAATTTATACGTCACTGTACTATA
AAGTTTCAACGTGTGCTTGTTTTAcaattttctctctctctctctcgttT
TAGGACGTTTGGTGTCAAAGAGCCCGAAAAAACACTGAAATACTTCACGA
GGTACAACGATACAACCATATCTTCCTTTACTAATAAACTCTCTTCAGTG
AAATAActgggtagctcagtcggtagagcatcggTAATCGCTTAGATTGG
GTTCCGATCCAGgtggtaagttactgggagctgagagtaggtttGACgtt
ccacctcagcattcgaccATCTCACATGTTTATCGCAAATATAAAAGGGG
GTAGACTCCTTCACTCCCCGCTCCGACggcagccaccagatgaatactTA
CTTATATGAAAGTTTTTCTTGATCGCTGATATAACAAATGGCATCAAAGC
GTTAACCTGTCACAAGTATATATATTGCTACAATTTGTCTTCGCTGAGTA
TTTaacatttctgaaatttcttttCAGGTCTTCGGACGAATGCCAAATAA
CGAAGTCAAATCTTTCGCTGATTTAGAAGAATATAAGGTCTGTTCAATTC
ATGAAATGCTCagattttcagcaattgtttcaaaacattttaacTCTCTT
GGAGCTAGGTTTGAAGTCGTAAACTCTGATATATAGCAAGTTTATGTctc
tgtgtttttctgcgacagaGAAGGTTAGCTTGATTGACTGAGAACGATGG
TAAACCTCGACTTTTCCCTAAAACTGCGGATTATTCGCTTAAGTCAAAAG
TGCAAAGTTATGTTTGCAGCAGGGATGGCAGAATCAGTATTAAAAGTAGA
GCAAGAGAAATGTTCATAGAATTGCGAAGATATTTCCTGCGCCCTCCACG
GTAATATCCTACCATAATCAAGAATTCCATAACTGCTGTTTTGTTCTTTA
GAAACGAGAATTTTTGGAGACAAAAGATCCAGTGGAAGCACGCAAGCTAT
TAAAGGGTGTACAAGGCTTTCTTGTTGAAAAACCTCTAGACTTTCTCAAA
GATCAGGATCTCTTCCCACCAGCTGATTCTAAAGAATTTGTTGCACCATA
TAAGATTTTTACTTAATTTTTGTGAATATTATTTTCATGACATATATATT
TTAATATATAAAGGCGGtcttatgtttttatttgacaTACACGCACTTTA
ACTTGAAGTAGTTTCACCTGAGGCATTATTTTTCCAGCCCTATCttttaa
gttttgaatttttctccAGCGCCTTTGTTAATTTTTGTTAGAAATTGGtc
gaaaaatattacaaaaaacCATCCTTTCCTGAAAAGTATTTGCTACGGAT
GTCTTTTTCGTTAAAGAAACTTTGCGTTAAAACTCG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_007335	XLOC_007335	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000162	supercontig	sc0000162:433261..448296 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.4676	10.8332	14.2014	18.6583	38.9769	23.6819	35.3422	38.6602	17.2139	16.0845	16.3582	11.456	18.64	9.15798	14.8547	18.7803	35.7801	60.1159	9.52364	17.9386	14.8988	10.1402	14.792	13.8217	16.559	16.4978	20.6381	25.1723	13.1258	13.7784

Blast

[Close]

BLAST of TCONS_00013129 vs. Swiss-Prot (Human)
Match: PLD2 (Phospholipase D2 OS=Homo sapiens GN=PLD2 PE=1 SV=2)

HSP 1 Score: 644.81 bits (1662), Expect = 0.000e+0
Identity = 381/939 (40.58%), Postives = 527/939 (56.12%), Query Frame = 2

Query:  518 KDIEDYGDVKIPFSHTFKSGKIEENFLV---GVPVRIRI--NERVVSYGAYRHRLNPNLYTVEFVHGRFKWTIKKRYNHFRRLRNHLEVYHAALIVKHPTMAIRL----------EKVPKLPXXXXXXXXXXXXXXXXXXXXXXFLQKVVNIDRYRNNEHVLDFLEVSHLSFVHDLGAKHKEQEVLKRAGGHTFS--KSFLKNHIIWIWHKRWLILRNSFVAYIDKENNRIRDVLLFDNKFNVSCDKTRTGIKNGIMVSNNRRDLVVRFQSDAQARSYFGNIINVMGKEGRDWIREHRHDSFAPIRNNTHIKWFVDGEGYFAAVADAIRKAKEEIFITDWWLSPELVLKRPITDVKAWRLDTLLKEKADQGVKIFIILYKELEVALPINSLYSKRALTSLHPENIKVLRHPDHQPTSDNPVWYWAHHEKLVCIDQKLTFMGGFDLCFGRWDDHTHRLVDFGSATPNFLDQTSQAVVNISNLFLETDVIDSEYHKQQLRKLPQTAKKWFIGKDYCNFYIQDVTEVEKPLIDLLDRNENPRMPWHDIACAMYGDAARDIGRHFIERWNFTKHLKCKDMHEI-PYLLPRCEPILEQGYQDFHISTVANVQVLRSSGAWSAGLLSTEHSILNAYKHHIRNAKYYIYIENQFFITCKSD-NVKNTIGDLLVERILLAHHNKETFRVYVVMPLLPSFAGEIGTSAATS----LHFIEYWNLQSARNIINTLQENGVEDPTEYITFNSLRNYADLRHKMVTEILYVHSKLMIIDDEVVIMGSANINDRSMLGDRDSELAVCVQDENKTLPGVMNGVEYRVGGFASTLRRKLFQEHLGLLNEPYYTVVDPVSQHFFKDVWCQRARKNTEILHEVFGRMPNNEVKSFADLEEYKKREFLETKDPVEARKLLKGVQGFLVEKPLDFLKDQDLFPPADSKEFVAPYKIFT 3265
            K+ ED  D   PF   ++   ++ + LV   GVPV  ++   ER  S           LY+V   HG F WT KK+Y HF+ L   L + H  L+   P     +           ++P LPR          +  ++  +   +L +++ +  YRN   + +FLEVS LSF+ DLG K  E  + KR+GGH         ++ + + W KRWL++++SF+ Y+  E   I  V LFD  F V   K  T  ++G+ +  + R L+++  S  QAR +   I  +    GRD+++ HRHDS+AP R  T  +WFV+G GYFAAVADAI +A+EEIFITDWWLSPE+ LKRP      WRLD +LK KA++GV++ I+L+KE+E+AL INS YSKRAL  LHP NIKV+RHPD        V  WAHHEKL+ +DQ + F+GG DL +GRWDD  +RL D G       D +  A         ++       H Q           +++GKDY N   +D  ++++P  D +DR   PRMPW D+   ++G  ARD+ RHFI+RWNFTK  K K      PYLLP+      Q            VQVLRS   WSAG L  E+SILNAY H IR +++++YIENQFFI+C     V N +GD +V+RIL AH     +RVYV++PLLP F G+I T    S    LHF      +   +I++ L+        +YI+   LR + +L    V+E++Y+HSK++I DD  VI+GSANINDRS+LG RDSELAV ++D  +T P +MNG EY+ G FA +LR+  F   LG    P   + DP+   FF+ +W   A  N  I  ++F  +P+N  +S   L EY   E L T  P  AR  L  VQG LV  PL FL+D+ L PP  SKE + P +++T
Sbjct:   31 KEGEDPADRMHPFLAIYELQSLKVHPLVFAPGVPVTAQVVGTERYTSGSKVG---TCTLYSVRLTHGDFSWTTKKKYRHFQELHRDL-LRHKVLMSLLPLARFAVAYSPARDAGNREMPSLPRAGPEGSTRHAASKQKYLEN--YLNRLLTMSFYRNYHAMTEFLEVSQLSFIPDLGRKGLEGMIRKRSGGHRVPGLTCCGRDQVCYRWSKRWLVVKDSFLLYMCLETGAISFVQLFDPGFEVQVGKRSTEARHGVRIDTSHRSLILKCSSYRQARWWAQEITELAQGPGRDFLQLHRHDSYAPPRPGTLARWFVNGAGYFAAVADAILRAQEEIFITDWWLSPEVYLKRP-AHSDDWRLDIMLKRKAEEGVRVSILLFKEVELALGINSGYSKRALMLLHP-NIKVMRHPDQ-------VTLWAHHEKLLVVDQVVAFLGGLDLAYGRWDDLHYRLTDLG-------DSSESAASQPPTPRPDSPATPDLSHNQ----------FFWLGKDYSNLITKDWVQLDRPFEDFIDRETTPRMPWRDVGVVVHGLPARDLARHFIQRWNFTKTTKAKYKTPTYPYLLPKSTSTANQLPFTLPGGQCTTVQVLRSVDRWSAGTL--ENSILNAYLHTIRESQHFLYIENQFFISCSDGRTVLNKVGDEIVDRILKAHKQGWCYRVYVLLPLLPGFEGDISTGGGNSIQAILHFTYRTLCRGEYSILHRLKAAMGTAWRDYISICGLRTHGELGGHPVSELIYIHSKVLIADDRTVIIGSANINDRSLLGKRDSELAVLIED-TETEPSLMNGAEYQAGRFALSLRKHCFGVILGANTRPDLDLRDPICDDFFQ-LWQDMAESNANIYEQIFRCLPSNATRSLRTLREYVAVEPLATVSPPLARSELTQVQGHLVHFPLKFLEDESLLPPLGSKEGMIPLEVWT 933

The following BLAST results are available for this feature:

BLAST of TCONS_00013129 vs. Swiss-Prot (Human)

BLAST of TCONS_00013129 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
PLD2	0.000e+0	40.58	Phospholipase D2 OS=Homo sapiens GN=PLD2 PE=1 SV=2	[more]

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TCONS_00013129 (transcript) - C. hemisphaerica