|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013169 ID=TCONS_00013169|Name=TCONS_00013169|organism=Clytia hemisphaerica|type=transcript|length=647bp
GAAACTTTGCACACATCAAGCAAGCaaatatgttcaaaaaaattatttga
aagtttcaataaaAGCTGACCATCGATGTTTTACAAAAGTTTCTCTAAAA
GTACTCAAGGTGggatttttgccatttttttcctGGACTATTACAAAAAA
ACCGTGTAGGTGATCTGATTCGATTTAAATAAATATACTAGGCTGTCCAT
TACCTTGGTGGCTACAAAGCAGCTTCATGGAGCGATGAACAAAAACTCTT
AGTTAAGGTAACTTATTGAACATAATTTTGCTACAGACAATCTAGTGCTA
GAGTGACCTCCCTCAAAGGGAACTTACTAAAACTActaaaagtggcaaaa
ttgaGGGCTAATTAAACTCAAGTTCTATTTCTTCACTTAAAAACTTCAAA
TAAGATTGACTAATTAAGAATAATTTCACACAAGATTATTAgtattttct
ctgattttcgaTAAATGGTATAAGTAAAACAGATATACACCAGCAGGGAG
GGTAATATGATACATTCTATTTATATAAATGGGGttgattttataaaata
taaataataaaacttttcaattaTAATATTCAGCTAATTTGTATTGCaaa
agtaaaaattaaaaaaaagatctaTTAAAACAATTGTCACCTTTTCC Run BLAST on NCBI transcript from alignment at sc0000162:431681..432429- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013169 ID=TCONS_00013169|Name=TCONS_00013169|organism=Clytia hemisphaerica|type=transcript|length=749bp|location=Sequence derived from alignment at sc0000162:431681..432429- (Clytia hemisphaerica)
GAAACTTTGCACACATCAAGCAAGCAAATATGTTCAAAAAAATTATTTGA
AAGTTTCAATAAAAGCTGACCATCGATGTTTTACAAAAGTTTCTCTAAAA
GTACTCAAGGTGGGATTTTTGCCATTTTTTTCCTGGACTATTACAAAAAA
ACCGTGTAGGTGATCTGATTCGATTTAAATAAATATACTAGGCTGTCCAT
TACCTTGGTGGCTACAAAGCAGCTTCATGGAGCGATGAACAAAAACTCTG
TTTCTCTTTTAAGAGCAATGAAGCTCAAAATAATGGCAAGAAATGAGAAC
TATTTAAGAGCAATCCACTTTCAGAATCGTCCTATTTAAAGCAAATTAAA
GTAGTTAAGGTAACTTATTGAACATAATTTTGCTACAGACAATCTAGTGC
TAGAGTGACCTCCCTCAAAGGGAACTTACTAAAACTACTAAAAGTGGCAA
AATTGAGGGCTAATTAAACTCAAGTTCTATTTCTTCACTTAAAAACTTCA
AATAAGATTGACTAATTAAGAATAATTTCACACAAGATTATTAGTATTTT
CTCTGATTTTCGATAAATGGTATAAGTAAAACAGATATACACCAGCAGGG
AGGGTAATATGATACATTCTATTTATATAAATGGGGTTGATTTTATAAAA
TATAAATAATAAAACTTTTCAATTATAATATTCAGCTAATTTGTATTGCA
AAAGTAAAAATTAAAAAAAAGATCTATTAAAACAATTGTCACCTTTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013169-exon-sc0000162-1575043694:432181..432429 | TCONS_00013169-exon-sc0000162-1575043694:432181..432429 | Clytia hemisphaerica | exon |
| TCONS_00013169-exon-sc0000162-1575043694:431681..432078 | TCONS_00013169-exon-sc0000162-1575043694:431681..432078 | Clytia hemisphaerica | exon |
| TCONS_00013169-exon-sc0000162-1510915933:432181..432429 | TCONS_00013169-exon-sc0000162-1510915933:432181..432429 | Clytia hemisphaerica | exon |
| TCONS_00013169-exon-sc0000162-1510915933:431681..432078 | TCONS_00013169-exon-sc0000162-1510915933:431681..432078 | Clytia hemisphaerica | exon |
| TCONS_00013169-exon-sc0000162-1491911889:432181..432429 | TCONS_00013169-exon-sc0000162-1491911889:432181..432429 | Clytia hemisphaerica | exon |
| TCONS_00013169-exon-sc0000162-1491911889:431681..432078 | TCONS_00013169-exon-sc0000162-1491911889:431681..432078 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000162 | supercontig | sc0000162:431681..432429 - |
Blast
The following BLAST results are available for this feature:
|
