TCONS_00013205 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013205
Unique NameTCONS_00013205
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length747

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013205 ID=TCONS_00013205|Name=TCONS_00013205|organism=Clytia hemisphaerica|type=transcript|length=747bp
AAGTGAAGTGTCGTTCACACGGGATTGTGTTTTTGTTTACAGtgaattca
agatggcggcagTGGAAGCAAAAAAAGCTTTCGTTTTCGCCTCATTTCTT
TTTTTCGAGATAAATTTGGTTTTTGGagcaacaaaagaaaagaaagatct
TCAAATCATCATAGAGGAGAAACCAAGTGAATGTGAAGACTTTGCAAGAC
CTGGTGATGTCGTTCATGTCCATTATACTGGTATGCTTACAGATGGTCAT
ATTTTTGACACATCCATGAGAGAAAATCGGttaccatttaaatttcaaat
ggggTCTGGAATGGTTATCAAAGGATGGGAACGTGGTTTGCATGGAATGT
GCCCTGGAGAGAAAAGGAAGTTGGTTATTCCACCTCATTTGGGATATGGA
AAAGATGGCATCATGGGAGTTGTTCCTCCTGAAGCAACATTACTTTTCCA
AGTTCAATTGGTGGGTTTAGAACGCGAAACAATTGGCAGTCAAATGGAAA
AATTCTTAATGTTTGCGATTTGGCCGGTTAGTTTTCTTATGGTTTTGTAC
TATTTGTATCGTAAAATCACCACAAGTGAATCTGAACTTGATCGTAAAGC
TGATAAACGAATGAACAAAAAGAAACGATAATTTTCTTTAATTCTTAAAG
TCTTAATTTTGTTCAAGAATTAGTTTTTAGAAAGCATTAACTCACGTTAA
ATTTGTAAGATTTTTAACCATCTAATCAATCTAGTAGTGTAACAGGg
Run BLAST on NCBI

transcript from alignment at sc0000163:320172..332051+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013205 ID=TCONS_00013205|Name=TCONS_00013205|organism=Clytia hemisphaerica|type=transcript|length=11880bp|location=Sequence derived from alignment at sc0000163:320172..332051+ (Clytia hemisphaerica)
AAGTGAAGTGTCGTTCACACGGGATTGTGTTTTTGTTTACAGtgaattca agatggcggcagTGGAAGCAAAAAAAGCTTTCGTTTTCGCCTCATTTCTT TTTTTCGAGATAAATTTGGTTTTTGGagcaacaaaagaaaagaaagatct TCAAATCATCATAGAGGTATACTCATTTTcagatttgaaaatattcactT GTGCTTTGGATCAGTCTCTGCCTAAGACGActgcaaaaataaaatacatt ttgttgaaattttgctgctttgttTTGATATGATTGTGGATTGAcagtct gggaaatcctctcaattgcacgcttatgttccgagggcgtaagcgggcaa ttgcatggttataatttacgcccgctcctgcctggttgaaattgcttagg gatttcaaggggttcagaattctctaattcgggcgaaggcatggttttat ataacgggcaatccatttttacggaatcttcttctacgataaattttgag taaaactgccctaggcttttgaaattcaacagagctttcggaaggaattg cgtgtcaaaaatataggaaaagcaaaagccgtcacccgtcaatcttgctt aacgcttaccgcccgtttcagaacaatttcgataagcgtgtataaaaatt ctgccattttgataaaccgtgcaattgcgcgcttacggcgCGCTTTGTTT tgataagcgtgcaattgagaggatttcccagactgattGATCAGGCATTT GATGGTTATGCAAGATTCCCTCCACTGTTGCAAGTTACCCAAGTTTACTT TAAACTAGAAATACTAGATTACTAGAACTAGAAAAACCACGACTTCAGTT TCTTTATCAGCCCTTGCATTTAACAGCCgtgcataattttttaaatatgc acgatacagtaattatgcatgctgtatcattgtttttatgctggagtaca taattattcaacacggctgcctctttaaaaaaaggtctataataaCATGA TTGAATCACAAAAATATGAAACGataccgtgaagttgggtaacttgcatc agtgcacagtggagggaaacttgaatagccatcaaatgaatgaccaatca aagcagaaaaatttcaaaacaaatgaatgcagctccgctcgcagctctac tttACCATTAACGTAGTCGTCTAAAAAAacggctattcttttttagaatt aaccttacaatctagtttttatatttataaaaactagattgctgacgtgt ggaaaggaatgtcaGCGTGACTGATCcctttgtttcgataataacatcaa agcgggaactaattttcttctcgtttctttctttcctttttctttctcat aaatTCAAGCTTTCCCTCGCACTctccaagcgtggttagctcaagcggtt agagcgtctgtctcataagcatgggtttccgagttcgatcccactgggtg tcaaatttttcaattcttcaaatttctttttttaattctctttctattat aatgaaggtcaatcaaacaagtaactagcatatattacctccgctctctg tgtaaggtttagataagctattatagcatcacttaataagaactttttta agtttttttttcttatcttttttttaccacaagtgattattcaaggctga gatatagaagaacaggtataggcgtttgcgcctgtgtttggtgactgaca gtttcagtttcagtttcactactttcactttcactttcagccagcgagtg agcgagcgattctttgtaagagaatcatcaaataacttctttcagaatca ttcttgttttatactttaaagacagaatgataattgatttccgggtcaaa atgtttgacacttgatccaatcgtttgcttatctttcttgcgttgtcgtc atttgaatttcagtattcaatgcttataaaatacggttgttataatataa gggtattaaactcctcactaagagggaacagatcatagattcgaattgaa cacgtaattactaatagcaattaaTATTACATAATGCGTTGATATTTCTT CACTTTCATGAAATgtgattcaaaattaaagtgatgcatagctgtcaact ctcccgcattgaGCGGGAGACTCCCGCATGTCAACGCTTTCTCCCGCGTG AAGAAAATTCTGCtaaatctcccgcatttttgggattttctcccgcatct cccgcatttccaaaaattttccgattttggaaaaaccaaacaGCAAAATT TCTGGATTTTGCAAGATCGGAACGAAAAATTCTCCAATTTCccgaaaaaa tttccaataaaatcgaattttacgagaaaatttccccgatttcccgattt cccgattttgaaaaatcggattatcggggaaaaattttcCGACTTGGAGC TCTCCTGCATTTTTGTGAGgcaaagttgacagctatggTGATgagcacaa aaacaaaatcaagaattggaNTTCCCATCCAATTTCTCTTTCgtttccca tcacgccatcttttgctatatttttctaatgtggttgttttgatttacag ccgccatctttatacCATAACAACAAAGCTTATTAGCAGGTGTTCATGCG TGAGCGCTTTACACGCTATCATTAAGATTTTAGGaataacaaaagaacaa aaagtgtcaattcaaaaatttttttttggctgaatgggggtacctaactc aaagcaatttctcaaggggacctaaattgctaggggcaccatgctcaatg ggggcacctgaaaagtgggctgaaaccatgacacgtaattactaatagca attaacattacataacgcgtcgatatctcttcactttcatgaaatgttat tcaaaattaaagtgatgagcacaaaaacaaaatcaagaattggaaaattt gtCTCCCAGCgggatcgaactcggaaacccatgcttatgagacaggcgct ctaaccgcttgagctaaccacgcttggagAGTGTGAGGGAAAGCTTGAat ttatgagaaagaaaaaggaaagaaagaaacttagttcttgatgttattat cgaaacaaaaggatcagtcacaatataaaaactagattgtaaggttgatt ctaaaaaagaatagccgtttttttagacgactacgttcgtttttgttttg atttaactttgtattttaatgaccaggccaggcccaattgatagtttggt tcATGTCCTCCGACCAACTCTACCACTAAGTATTTGGGAAAAAATACTTC ATTTTGAGTTGGAAAAATCAAATCCTTCTTTCCTTCTTTTCATGTGAGCG TCAATTTCagcgtttttttctttataaacaacaACCACTTCGCgctcaaa aaggaaaaaaataaggcACAGCTTACACCATTGTGAGCGAGCGGCAAAAA TATCCCAGTGTAATCtatacttaaaaacaaaaattaagcaCCTAAAAGCA GAGAGTTGTGGCTGTATTCCTTATAAGAACACGCAGCGAATGNCTTACAC CATTGTGAGCGAGCGGCAAAAATATCCCAGTGTAATCTatacttaaaaaa caaaaattaagcaCCTAAAAGCAGAGAGTTGTGGCTGTATTCCTCAATCT GGATGCGTAGAAGTGATTTTGTGATCGTGGTGCGTACCTTTGTGGATCCA GGGTTCAGGCTTTTTCTTTACATTCGCGGTTGGAATCCAGGATTGTGCGA TTGCTTGAAGAATGaaggatttcaaaaattgaggttttggtgggaaaaat taaaaaaaggttcAAATTTTAGCTACAGTACCGACCGACCATTTTTTTAA AGCTTCTAGGACacaaaccaaacaatcaattgggcctggccccagctagg tcattcatttgagggcaaGGCATGTACTAGCCTCCccctgatgcaagtta cccgatctcacggtactgTTTTAAAAAGAACTTAGGATAGGTAAGGCTTA AAAACCCAAAGTAGGACTTTCCTAACCAAACAGGCAAGTACTGAGGGAGC GATATGAAACAGAAGgaaaaagaaacaattttacTGTTAACTACAATTTT TTGAATTGATTGAAAGTTACCGGGCTTTCAAAGTGTGTGAATATGGATGA TGACTACCATGGGCTAAATCTTTGTGCTAATTTTGGTTTTCCCCCGTCTT CTCCCCTCctcgaaaatgaagaaaaagaaatctgTGGCATGGAATCATTG TTTGTAATACATATATCTCAACACTTGAGCTATTTTATTGGATTATCACA CAATACATTTTAAGTACATCTTCGtgattttatctttattttactTTAAG GAGAAACCAAGTGAATGTGAAGACTTTGCAAGACCTGGTGATGTCGTTCA TGTCCATTATACTGTAAGAGTTAAGAAAAccttaagagccagttttttta agaatggggcagtttggggcagttccaatagtttgaaacttagatttttt tcatttttggatatgttgttaagtacaatgaactgNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNCTCAAATCTTCAAAGGTGAACTTTACCAAcccc ataaaacaattttgccaTCAACCTTTCTGCCCTTAAATACTTAGAGATAA GtccaaaagtacaaaatattcTTAAACCTTTTCTTCTCTTTGGATAATTT GAACTTTGAGCTCATTAACTGCATTTAAGAGCAAATAGGCTGatagcaaa attgttttatggggttggtaaagttcagctttgaagatttgagagtttag aagcacattttgacagacttgatccttaaatggtagatcaggaggtaaag atcttgatgaatgTTTGTACTATCCCCATGNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNATCTTTAGAagcacattttgacagacttga tccttaaatggtagatcaggaggtaaagatcttgatgaatgtttgtacta tccccatgaaacttttcaaaaaccaagattttattatctgagtgggctca ttttctgttcaatcttgagcaaaaattgttgttttgagcaacattgtcaa gatttttaggattgtagagttaaaactgactttgagctagccctcttctt taaaagaaaagaaaaggttccaacttctgataaattcttgaactatctat aggatgctttcacaaaatcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttt actcagttcattgtacttaacaacatatccaaaaatgaaaaaaatctaag tttcaaactattggacctgccccgctcttaaaaaaactggctcttaaagA CGCATAAACATCTgagatttttcttaaatcaccCCCCCctcttcttaaca gaaaaaaaacCTTGCCTCGAAGGTCCTCCAGTAAACCCAGGTTTCATTTT CGCAATTCATGCAATCACAAATCAGCTAGACTTATTAAGATTCGCGGTAT TTATGCAAACCTTTGAGCGTTCTTTAGGTTTTATATTTCTCACAATTTGA AATTGCATTATCTATCTAACAGCATACAACTATTCTTTCAGAGTTTTATT GAGCTTAATTATCATCTTGAGTTTAATATTTCTTCTGTAGGGTATGCTTA CAGATGGTCATATTTTTGACACATCCATGAGAGAAAATCGGttaccattt aaatttcaaatggggTCTGGAATGGTTATCAAAGGATGGGAACGTGGTTT GCATGGAATGTGCCCTGGgtaagtgacgtcatttttgattttctacgtgc agtaccgtaagttggtctaatatcgacatccctcgtctaaatcCGACACC CTTCTATAGAGACAGGAATAACATTAAAGTCTGAATcaatgattgaaaaa ggattattcctcccTGACcattaagcaaagaaaaatagttttgacctttc tatcaatttcagctgaagggtgtcgaaattagctgagggatgtcgaaatt agaccaAGATACGGTATCGGATTGGAGGAGGTTTCCAAATTAGCGATAGA GAGTCTTTATTTCCCCATAAGGATTATGGCTAAGATAAAAACTCTctatc ataaattttgaaactcttTTTTAAATCCGCCACTGCCCAGTCTTTTTTAA TTGTAGAAACTATACTGATATGGAgttaatgggctcttccagaaaaaatc ggTTCATGGAGGTGGAGGAGATGTTGTTCACGGGTATTGAAAGAGGTGTG AAAACCGTCATGTCCAAACTCGCAGTGTCCAGGCGGGGGTCAATTTAATG AGACGTTGCCAGGGgataaaaaatcgaaatttacaGGGGTAGATCATTAA AAAACAACATATATCCTCCATCCTCCACTCTACCATGAATGGatattacc ttaagtggattagtTCTGGcgtgaatttaatttggcgattggccaaaata gaattttggcggggattaaatttggcgatatatcaattttgtaaaattta gcggggatttaatttgacgaattggaaattttgagaaatttaaaatatac ttttcttaaaatttgtcaaattcgccaaatttaatatccgccaaaattaa tccacttaaggtaattaCGAGAACCTAATCTTATCATCATTTCGTTTCTG TAGAGAGAAAAGGAAGTTGGTTATTCCACCTCATTTGGGATATGGAAAAG ATGGCATCATGGGAGTTGTTCCTCGTAAGTTATTTTGCATTTGCATTTGA GCAAAAGATGATTTGATTTGCACTTTTACTTTTGTATTCAGTTTaggctc tctaattcgatgatTAGACTATTTGATctgttctattattcgataatagT GAAAGTCaacgtcaacaagaaactctcgtaATTGATACGTTTTCTTATTC GATTAAAATGCTATTCAccttaaaaaattgaattagagaACGTTAACATT ATCTATTAACCCTTAAAGCGTAAGGAGACTAGCCAAGAGTTTACCAGGTA GAAATGCTGTCAAAATTCTTTGTCTATGCCTACGAGAAAAGTCAATGTAA CCAATTCTGACATTTGACATTCATTTCTACTCGGTAAAATCGATATAACA TCTTTAGACATTGGCTTAATTCTTGCTGGTTAATCTCTAACCCAGCCTCC TAACGCTTTAATAAAGATTGTTAGGTGTGCTCTTATTAGGTTTACGATAC TATTTTGATGATTAAGCTACTATAAACATGAAAGTTAATTATAAATTATC aggttttggaaaaaattggaattttggGTAGTGTACTTtgtaaaagaaat taatttgCAAAATTGATTTGGCGAACCAGTATTATTCAACCTAATTATCC GTCCATGTtttattttgtgtttgttttggtgaaaatcgttgttgattttt gaaagttctGGCACGCCATTCATTTTGGCAGTGATAATGTTTTATGTGCT GAATCATTAATTGAATTCGAaattatgtttttgtttgtttttcatcGGTT GACACGCGACCACTTGGCTGATTCACTTCTTTATAAGTACCCACTTTAGA GAGGCTTTAATAAGCTGGCAACAAACTTTGAAATATAAATGTATCTCTGT AATAAAGCAAAAATGATTAAACTTTCTTGAAATATCTGTATAATTTCATT GGGAATTACGATTCATATAAACCATACTCAAATTATTGCCTTATTTTTGA GTACCTACTTTAGAGAGGTCCTAATAAGCTggcaacaaaatttgaaataa tgtaTCTCTTTAATAAAGTAAAAACGATTAAACTTTCTAAAATTTCTCCT GTAATTTCATTGGGAATTACGATTCATATAAACCATACTCCAATTATTGC CTTATTCTTGAGTACCCACTTTAGAGAGGTCCTAATAAGCTggcaacaaa atttgaaataatgtaTCTCTGTAATAAAGCAAAAATGATTAAACATTCTT GAAATATCTGTGTAATATCATTGGGAATTACGATTCATATAAACCATACT CCAATTATTCCATTATTTTTGAGACTTTTAGAGGTATTCTAAttattaaa atataaattttgaaataccgTATCTCTGTAATAAAGCAAAAACGATTAAA CTTTCTAAAATTTCTCCTGTAATTTCATTGTGAATTACAATTCATATAAA CCGTACTCCAATTATTGCCTTATTTTTGAGTACCTACTTTAGAGAGGTCC TAATAAGCTggcaacaaaatttgaaataatttatctCTGTAATAAAGCAA AAACGATTAAACTTTCTAAAATATCTCCTGTAATTTCATTGGGAATTACG ATTCATATAAACCATACTCCAATTATTGCATTATTTTTGAGACTTTTAAA GGTATTCTAATTattaaaacataaattttgagatACTGTATCTTTGTATT AAAAAGATGTGCTAATCCAATTTAAACCCAAAATAAATGTAatgtacatt tttttcaaaagaatatgACTAAAAAAGATCGTTTTCATACTTTTAAGATA TAGGGGAAGCACGTAGGCTCAAACAAAACTATATTATGTAAATTAACCAT TACTTTAACACACTTATGTTAACCCTTCTTAATTTTAAAAGTCTACGTAA ACGCAACGGCCAGAACTAAGgttaagtaatttttttttgactgggTACTT CCAGTACAGAAGTGAGTTCGGTCGCCGCATTATTGGATGGCAccgataga tgtttttttgttaaattatctaatttccgccattatggaagcaaacgttc aaTTTGCGCAAGagtacagattcgaacgttttgcttccataatggtggaa attaaATAACTTAAACTTAACAGAAGTAACTTGACAAAACAGAAGAATGA AATTACTATAGAGTTATTTCGTTCTACCATCGTGGTTGACGTTTCCCTGG AATGGgccttaaagtttttttaaacttaTATACATAAtatgaatattttc tttaacaATAGCTGAAGCAACATTACTTTTCCAAGTTCAATTGGTGGGTT TAGAACGCGAAACAATTGGCAGTCAAATGGAAAAATTCTTAATGTTTGCG ATTTGGCCGGTTAGTTTTCTTATGGTTTTGTACTATTTGTATCGTAAAAT CACCACAAGTGAATCTGAACTTGATCGTAAAGCTGATAAACGAATGAACA AAAAGAAACGATAATTTTCTTTAATTCTTAAAGTCTTAATTTTGTTCAAG AATTAGTTTTTAGAAAGCATTAACTCACGTTAAATTTGTAAGATTTTTAA CCATCTAATCAATCTAGTAGTGTAACAGGg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007385XLOC_007385Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013205-exon-sc0000163-1491911889:320172..320337TCONS_00013205-exon-sc0000163-1491911889:320172..320337Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1510915933:320172..320337TCONS_00013205-exon-sc0000163-1510915933:320172..320337Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1575043694:320172..320337TCONS_00013205-exon-sc0000163-1575043694:320172..320337Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1491911889:324472..324534TCONS_00013205-exon-sc0000163-1491911889:324472..324534Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1510915933:324472..324534TCONS_00013205-exon-sc0000163-1510915933:324472..324534Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1575043694:324472..324534TCONS_00013205-exon-sc0000163-1575043694:324472..324534Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1491911889:328412..328539TCONS_00013205-exon-sc0000163-1491911889:328412..328539Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1510915933:328412..328539TCONS_00013205-exon-sc0000163-1510915933:328412..328539Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1575043694:328412..328539TCONS_00013205-exon-sc0000163-1575043694:328412..328539Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1491911889:329425..329495TCONS_00013205-exon-sc0000163-1491911889:329425..329495Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1510915933:329425..329495TCONS_00013205-exon-sc0000163-1510915933:329425..329495Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1575043694:329425..329495TCONS_00013205-exon-sc0000163-1575043694:329425..329495Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1491911889:331733..332051TCONS_00013205-exon-sc0000163-1491911889:331733..332051Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1510915933:331733..332051TCONS_00013205-exon-sc0000163-1510915933:331733..332051Clytia hemisphaericaexon
TCONS_00013205-exon-sc0000163-1575043694:331733..332051TCONS_00013205-exon-sc0000163-1575043694:331733..332051Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000163supercontigsc0000163:320172..332051 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.157375 0.516432 3.12735 3.97881 5.02312 3.39943 4.8806 4.72938 5.46498 5.42985 2.33356 4.68007 6.14255 6.0585 6.8869 8.35286 7.74599 5.57617 3.1879 2.3056 5.29204 4.88093 4.33479 3.13185 4.38932 5.44884 1.51081 1.4055 2.44045 2.48011
Blast
BLAST of TCONS_00013205 vs. Swiss-Prot (Human)
Match: FKBP2 (Peptidyl-prolyl cis-trans isomerase FKBP2 OS=Homo sapiens GN=FKBP2 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 3.700e-34
Identity = 60/114 (52.63%), Postives = 83/114 (72.81%), Query Frame = 2
Query:  140 KKDLQIIIEEKPSECEDFARPGDVVHVHYTGMLTDGHIFDTSMRENRLPFKFQMGSGMVIKGWERGLHGMCPGEKRKLVIPPHLGYGKDGIMGVVPPEATLLFQVQLVGLERET 481
            K+ LQI ++++   C   +R GDV+H+HYTG L DG  FD+S+ +N+ PF F +G+G VIKGW++GL GMC GEKRKLVIP  LGYG+ G    +P  ATL+F+V+L+ +ER T
Sbjct:   28 KRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQ-PFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIERRT 140          
The following BLAST results are available for this feature:
BLAST of TCONS_00013205 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FKBP23.700e-3452.63Peptidyl-prolyl cis-trans isomerase FKBP2 OS=Homo ... [more]
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