TCONS_00013255 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013255
Unique NameTCONS_00013255
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5285

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013255 ID=TCONS_00013255|Name=TCONS_00013255|organism=Clytia hemisphaerica|type=transcript|length=5285bp
GTCGGTTTTCAAGATGTTAGAGAGCAACAATGATTTTCGTCGGTTAAGTT
GCgtgtgattttttgcacaaaatgaAATCTGCCATTTTACAACTGATTTT
TTTGTTCAGTTTTTTGACACTGGTAATTCTAATATTAAACTACTACACCA
TCGGTGGATCTAACGTGAGTCATAAAGCATCGAATATCATTAATCTGGCG
TTTGAACATAAAATACAGTATCTAACATCCAAACGGTCCACGATTAAGAG
AATAAATGTCAGACAACGGTTGGTAAATGACATTGGTATAGTAATAGCAG
AAGAGCAGCCAGATTTACAAGAAATTAACACACTTTATAAAGACGTTGAT
ATTGACACTTTAAAGAAACAAAGGAATAATACAACTTCTTCAACGACGGT
GGTGAACCAAGCTCTGGTTTTGTCGTCTATCATTGAACATGATCCAACCA
TTGATGAAAATGCTCTTCCACTGTCCTTCAAGTATTATGATAACTCAAGA
CGAAGACTTCCAGAATGTTCGGAAGAAAAGCCAGCTCAAAGAATCGCATT
GTCAGCACTTCACCACACAGATGACGATCAAATACTCAATAACATTTTTT
ATAGATACGGAGACTTTAACAATCTATATTTCGCATTACCAAAAGCACCT
ACATTCGAATATTATTGGCCGcttagattcaatccgtcattcgTTGATAA
GCTTTTGATGCATCAATCGAAACCAAATTTTATAGTCAATTCTGCTCGTA
ATAGCCAAGGAAAGCTGCGCGGAATGTTGTCCtcgaaaactttatttttg
acgATGTTACGGGACCCTGTGAAACATTTTCGAgatatttatgaaaaaat
cgACATGAGTAAGCTTATGAAATCGATTCATAAGACGAATTCAGATATTG
AAAACTTTAAAGAGTTTATTGAAAGACCTTTGGCTAATATTGATCAGATT
TTGAACACAACGAAAAAGTTCTATCCACAGTTTCACCTGCTGAAAAATCc
cCAATTATTTGATCTCGGTTATGAAGTTGGCGATTACCGGACAAAGAATG
ATTTGAAGGAGATTCTGAACGATATTGATGAAGAAATGAGTATGGTAATG
ATGAACGAATATCTTGATGAATCATTAGTGCTATTGCAGAGATTGTTATG
TTGGCAATTGGCTGATATGGTACACCTCAAACGCCGTATAACCAAGCAAG
AGAAATATCATCTTTCATCTAACGTTAAGGCGAAGATTCGTAGTTGGAAC
AAAGAAGACGTAGCACTATACGAATACTTCAATAAGACGTTGTGGAGGAC
TATCCGTGAAAACGAGGATCCTTTGTTTTGGAATGATGTCAAAACGTTGA
AGGaaatgaatggaaaaataaacaagGAATGCTTTGTAGAAGAAAACGaG
AATTTAGTTATccgtgatgacgtcattgaagaAACTAAACCCATTTGTGA
GCGATTGGCTCTTCAAGAGAAAGATTACGTCACTTTACTGAAAGTCAAGC
AGAAAGAACGAATCAAGGAAGAGTTCGAATCTTTGTGGAAAAGTAACGAT
GTCATGAATGGTACGGATGGAAAGTTTCTTTATTGGTCGGCTGAAGAAAA
TAATGCATCTGATTGGTTGGTTACAAAAAGGGATCAAAATGGTAGGCAAG
CTGTGAGGGAAGATGGGGAAGAGGAGAAAATAGACATTTTGAAACTTTGA
TATCAATTAGTAAAAGGCATGGTTCAGTTTTATTCCAAAGCTCTGACGCC
CCAAATGATACCCCTCGTTACGCCATCGCACAATTGCCCTCAAGCAGTAG
CGGAGTGGGTGCTTCAGAGCTGGGGGACAAAACTCATTTGACCTTTTTGG
CGCCCCTATTTTTGTAGGCGCCTGCCCCATTCGACCCTACCCTTTAAGTA
CTTGGTCAACGGATTTATTTATACTTTAAGACAATTTCTTACTGTCTTAA
GCCTGTTCAGTTGTTGGAGTAGAAAATGCAGGTAATACGAATGAAGATTA
TTTTCTCAAGATCCtaagaataaattttcttaaaaaaggatCTACTGTTT
ACGCGGTAAAAACGTAACACTCTATCATAAGACATACACTGTGGATTTTC
CAAAGGTGGTAGCAAAAGGGCGCGAAACACTCAACTGTTTGTTTTTGTGa
gcatttatttacttttattaacCCACTGTCACTGGATCATTCAAACGACG
TACTGAGAAAAGGAGTAATTGGCTCACCTAATGGATTTTACTTTCCCATT
CATAATAAACTGtttatcaattttcaaacttGTAAGCGCCACTATGAGCG
TACTTCCTTATACGTACAAGAGAAGAGCAAAGTATTTTATTTGTAATGAT
TTGTTCGCGCCCCATCCTTTTTAGCGTCCCCTTAAAAAATTTCTCGCTGA
GGGGGCATtgccccccttgcccccccctgCCACACCGCTACTGCCTCAAG
ACTCTTATGCAAAAACATGTCACTTTGAAATCATAattattcatattttt
ttcagtttgaacatatcAGCTTGTAAAAATCCGCTATTATTTCAAGTCTT
GCATTGATAAGTAGCGTATTTTGAAGTTCTCCTGTAATTTAGCTGTCAAC
AACAAAAATCTCGGGTGTCTTTTCCAAAAAGTGTCGTCAAAGTCTgttgt
tattttattttgaataatcGTGGTGAATGGTGGCGTTTAGATTTATAACG
CCCTTAAAACAcgcttttttgtaagaactaataaattttggctcaggctg
ggctaatcttaattttttgaaattttcagccttaaaatgttctttttgtA
ATATGACTTTAGaacatttcatttattttgagcaaaatgatatttagttt
gttcttagaTATTCGGCAGATTGTTTATCATTTGTTCTTAGTTTcgtggg
cttaaaaaattgttcttataaaaaatacgtgTAGCTGGTTACCCCTAATG
GGGGGGggttagtctgaatcgcagacctctacaaaaccgaaGGTAGTATA
GCTAAAAGTACAAATTCGATTGTTTTCGTTAGAGGATGCAAGCTGCCTAT
AATGGggatataatttatttttctcatttaaGACAATATTTTGAACGCCG
TTCCCAGTAGGTTAAGGGCCACACAGGATCTGTGACAATGGGGCGTAAGG
GAAGAAGCAATATCACCGAAGAActtaatcttcattttttttacaatatt
tttaaataGTAATAATTTATTATCCAACAAAGTCTTTCTTTTGGTTCCAG
CTTTGTACAGTCTGtttatataaaagaaaaatatataaagcattttcaaa
tattatttttttcataatattcTTTTCTCTAAACTATAATAATCATAAAC
TATAATCGAGGCATCCCGTTACCTTAaaggtacaatcatggtcgaaatat
attgagaattccggttattttaacgttttttcaagatttaaagttccggc
gagaaagtcgattttgggctatctctttaatttaatcgaatatttcaatt
tgggagatcccaaggtcctaagtctagcgttaaaactcagcgttaaaact
ctacccctcgaacctactttagagcacttacaaatcaattgtggtttcaa
aacttcctggggaattttccttttttctcaaatattatgaccttgattgt
aaatTAATCTATCTTTTGCTCAAAATTGCAGTTGAATAATGATtcaaaaa
agttgtaaaagAGGTGGCTTGTACGGGTCTGACGGTCTGACGGTATCAAC
TGTCGCTGTTTTGATGGCGGTAttccaataaaataaaaagggtATTTCGG
GTGTTCACGGCTCCCCGTCTAAAGGTATTTTTTAGGTTCAAACTTTTGTT
AATTGTAGCTTTTCTGTCAGTACTTAGGTAGTGCCCTTTTTTCAAACGAA
TCGTCTCTAGCTCTCTTAAAAAGTTATAAGGATTTAAAATATAAGGACAA
GTACCTCTTTAAAAAGTAAACCGGATAATGCACGCCATTATATCTCGGGA
GCCCCAAAAGAAGCCtaaccagacgtaattaatcgaacagttcgattact
gaactaatcgaactttgtcgactTTAATCGAAcgacaaagtttgattaaa
ttaattaatcaaacttttcaaaagttgctaaaattgtgagtattcgatta
tgatttagttcgacaaagttcgattaaaaatacagttcgattggtttgat
taattacgtctgggcCTAACAAGGGGGCACCACACTGCCATTTTTTTTCT
ACGCTaacatagtttgcacccccttTGGGTGCACCAACCAGGGCCTTTGT
AAAGGGGGAGCTACAAAGTTTCAAATTACGCGGGAGAGCATAATGAGTGC
CAACACACACCTCAATGTTCGACGTGTCACCTATAATCTTATGTCACAAT
TATGGTGCCCAATCCCTCTCATtataatttgaaatcatttttaaaagttt
aaaaattctcTTTGAACTGAAAACAAGACTGGTTAGTCTCATAAATTTCC
ATtagagggggtttatctaaagaatccagcattactaaaaatagacaaaa
agaacgacaaatttcataaaaaacgacatatttcgccgtccacaaccccg
gcgactgaaagtgactgtaccacccctagcgattcattccccttcgttta
tcacgggaattaactacatgtggtctaaaagaacgacaaattacgcatgc
gtgttacaATGCAGGATCCTTTAGAGGAACAGACTGTTAGAGTGTAAGAA
GAATGAAACTTTCCTTTGCTTCCATAGTAATACAAAAATATATTGGCCAT
TGTTATTAACATTTAAGACTGGATTGGAACTAGTTTTGTTATGTGACGGG
AATGTCCGAGGCTGTTAAAATGGGACCCTTGGACCGCACATAACCGACAA
CCATTATGCCTAAGTCCCCGGGTACAAAGTCCTGACCACATTGAATCTAG
CTCATACATCAGCAAATCCAAACTGACACAACGCGTCCAAAGTCCAAATA
ACATCCAtgtaacgtccaaataacgttatctAGACGTTAAAACAATGTCA
CGTGTCAGCTTTTCGAGGAATGTGCTTCTGCTCCAATTATATTATCATTC
GATCCCACTTCTTCATGACAATGCATTGTTCTGGAACCTAACTGGTCGGC
AATAATCTTGGAATGTCCGACTAATTAGTATATAAGTCAATAGATTTCCT
TTTCCTTTGACTGGTACATAACCTCTCTGTTCGAACTCAAAACCACGATC
TTTCAATACTTCATATGTGTCCCCCAacacctgaa
Run BLAST on NCBI

protein sequence of TCONS_00013255-protein

>TCONS_00013255-protein ID=TCONS_00013255-protein|Name=TCONS_00013255-protein|organism=Clytia hemisphaerica|type=polypeptide|length=542bp
MKSAILQLIFLFSFLTLVILILNYYTIGGSNVSHKASNIINLAFEHKIQY
LTSKRSTIKRINVRQRLVNDIGIVIAEEQPDLQEINTLYKDVDIDTLKKQ
RNNTTSSTTVVNQALVLSSIIEHDPTIDENALPLSFKYYDNSRRRLPECS
EEKPAQRIALSALHHTDDDQILNNIFYRYGDFNNLYFALPKAPTFEYYWP
LRFNPSFVDKLLMHQSKPNFIVNSARNSQGKLRGMLSSKTLFLTMLRDPV
KHFRDIYEKIDMSKLMKSIHKTNSDIENFKEFIERPLANIDQILNTTKKF
YPQFHLLKNPQLFDLGYEVGDYRTKNDLKEILNDIDEEMSMVMMNEYLDE
SLVLLQRLLCWQLADMVHLKRRITKQEKYHLSSNVKAKIRSWNKEDVALY
EYFNKTLWRTIRENEDPLFWNDVKTLKEMNGKINKECFVEENENLVIRDD
VIEETKPICERLALQEKDYVTLLKVKQKERIKEEFESLWKSNDVMNGTDG
KFLYWSAEENNASDWLVTKRDQNGRQAVREDGEEEKIDILKL
Run BLAST on NCBI

transcript from alignment at sc0000163:304239..311636-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013255 ID=TCONS_00013255|Name=TCONS_00013255|organism=Clytia hemisphaerica|type=transcript|length=7398bp|location=Sequence derived from alignment at sc0000163:304239..311636- (Clytia hemisphaerica)
GTCGGTTTTCAAGATGTTAGAGAGCAACAATGATTTTCGTCGGTTAAGTT
GCGTGTGATTTTTTGCACAAAATGAAATCTGCCATTTTACAACTGATTTT
TTTGTTCAGTTTTTTGACACTGGTAATTCTAATATTAAACTACTACACCA
TCGGTGGATCTAACGTGAGTCATAAAGCATCGAATATCATTAATCTGGCG
TTTGAACATAAAATACAGTATCTAACATCCAAACGGTCCACGATTAAGAG
AATAAATGTCAGACAACGGTTGGTAAATGACATTGGTATAGTAATAGCAG
AAGAGCAGCCAGATTTACAAGAAATTAACACACTTTATAAAGACGTTGAT
ATTGACACTTTAAAGAAACAAAGGAATAATACAACTTCTTCAACGACGGT
GGTGAACCAAGCTCTGGTTTTGTCGTCTATCATTGAACATGATCCAACCA
TTGATGAAAATGCTCTTCCACTGTCCTTCAAGTATTATGATAACTCAAGA
CGAAGGTACAAGTTCTTGTTTTTATTAAATAAGGAAGTATTAAAAGACTC
CTGATGATTCACTATAAAGACTATAAAGACTCCTATATTTTCTTCTTTTC
TAAGAAATTGCATGTTTTTAGACGCTAATTCCAAATGCCATTTTAATATT
TTATTCTCAAAACATGTTCTTGTTGTGAATCTATAGAACACATCACATAA
TCCTAAAGTAGCGTCATCAGTAAACTAACGAAGTTATAAAATACGAATCT
ATCAAAGATAATTTAGCCTTTTTATACTATATTGTATCTATGGTTAAATA
TTATTCATTTGTTAAATACTTTCAGACTTCCAGAATGTTCGGAAGAAAAG
CCAGCTCAAAGAATCGCATTGTCAGCACTTCACCACACAGATGACGATCA
AATACTCAATAACATTTTTTATAGATACGGAGACTTTAACAATCTATATT
TCGCATTACCAAAAGCACCTACATTCGAATATTATTGGCCGCTTAGATTC
AATCCGTCATTCGTTGATAAGCTTTTGATGCATCAATCGAAACCAAATTT
TATAGTCAATTCTGCTCGTAATAGCCAAGGAAAGCTGCGCGGAATGTTGT
CCTCGAAAACTTTATTTTTGACGATGTTACGGGACCCTGTGAAACATTTT
CGAGATATTTATGAAAAAATCGACATGAGTAAGCTTATGAAATCGATTCA
TAAGACGAATTCAGATATTGAAAACTTTAAAGAGTTTATTGAAAGACCTT
TGGCTAATATTGATCAGATTTTGAACACAACGAAAAAGTTCTATCCACAG
TTTCACCTGCTGAAAAATCGTAAGTTATTATCGAAAGTGTTCATCTATTA
AACCATCAACTCTTGTGCCAAAATTCATATAAAGCCAAATTGTATTCGAG
TTTACTACATCAAATGTTTTAAAACATTGGCGAACTCACGGTTCCACGTA
TTGGACAATGTAAAACGAGGTTCTATGAGTCAGTAGCGTGGTTATGGTAG
ACCAAAATTTGGGCAAACTGGGGAGACAATTTTAGAAGATTTTGATTTGG
GCGCCTTTGTTTTTTTGGCCAAAAACTGTCAATTCTAAGGTGTAGAAAAT
CAAAGGGGCGCCAAAATTAGTAATCAGAGGTGTTATTTCGCGCCCTTTGT
ATTTTCAGCGCCCTTAAAAAAATCGGCCGCTAGGGGGGGGGGGCACTCCC
CCTGCCCCACCACGCTACTGCTAGGAGTCCTCTTTTCTTTCAGATGTAAA
TTCTACATATTGATAAGCAAGCCAAATTTTTTTCATGTCCTCTAATTTGA
ACCTCTATTTTTTCTAATTTGCACTAAAATATTGTTTCCTCGGCATAGCT
TTATCAAAACTCTATAATCAACAATCTCTATCTCCTGGGAATTCTTGTTT
CTTTTGAAATTGAATACGAGACGATCGAGTTTGACCGAGTTAGCAATTTA
TCCATACAGCATATCTTATAACAAATTCCCCGAAACAATAATTCGAAACT
ATAGGATAATATCATTTGAAGAGGATTTTTTGTGAAACAGTCAGGTTCGG
CGGAGGCGGGGAGACTGGAGAGGCCAAAACCTCTCTCAACTTTGAGCAAA
TGAGATTATTATCTCAAATTCCTAGCGAGTTTTATCTCATTTTGAACCTT
CAGCCTCCCCGCTTTTACGGTAGTTCCACCGGGTCTGGACAGTGAGTGTG
CTGTATAAAAAGCCTCTCTCTTTCATTTTTTCAGCCCAATTATTTGATCT
CGGTTATGAAGTTGGCGATTACCGGACAAAGAATGATTTGAAGGAGATTC
TGAACGATATTGATGAAGAAATGAGTATGGTAATGATGAACGAATATCTT
GATGAATCATTAGTGCTATTGCAGAGATTGTTATGTTGGCAATTGGCTGA
TATGGTACACCTCAAACGCCGTATAACCAAGCAAGAGAAATATCATCTTT
CATCTAACGTTAAGGTATTTATTTCTTCTATTCAACGATTTCAGTTTAAA
ATCAGAAATAACTTCTAAATAGATGTTGACATTCTTACGTGACCTTTGAC
TGTCTTAGGCTATGTCATATCTTCTCTTGTCTCGTGCATAGAACTCTTAT
TCTTCGAGTAAGTCCTGAAATCTTGGAGCTGTCTACTGTTAAGACAAGAA
TTGTCTCATCTAAGAAAATTACTGACACAAGAAATTATCGTGTACAGTAA
GAATGGTCGGTTGGGAATTTGGATGGTCGGGTGTGAGTTTGTTTACACGT
GTAAATTTGTCTTGCTATTGCCCATGAGGATGTACAAAGCTTTTAGAATG
GAGGAAGGGTAGATAGTAATATGGGGGAACCATACAGAGACTATCTGTAG
ACAATTCCCCTTCGGAATATTGTAAAACGAGCTGGCAATATATTGAATTA
AAGACATCTTTTCAGTATATTGTGAGCACTTTACAATATATTGCTGGTAC
TCGCCAATATATTGCCTGACAATGTATTGTATGTAGACCTTAAATGATAC
AATAAATCCTAAAAACTAGCAGCCCAAAGTTGACAATTTATCTTGAATTC
GTAAGTAAAATCATATAGAAAATAGGTGCTTCTAGGTATTATCAATTATT
TCAGGCGAAGATTCGTAGTTGGAACAAAGAAGACGTAGCACTATACGAAT
ACTTCAATAAGACGTTGTGGAGGACTATCCGTGAAAACGAGGATCCTTTG
TTTTGGAATGATGTCAAAACGTTGAAGGAAATGAATGGAAAAATAAACAA
GGAATGCTTTGTAGAAGAAAACGGTATGTTGTTTAAATGAGTAGTGTAGA
CAGTTCCTTAGGGTCTGTTGCATTTATGGTGTGATAACTGAAAAAAACCT
GGCGGTCTAAGAAGGCTCACTGCAATCCGGGTCCTGGTTTCCTGTTTTCA
CTCATAATCGTCTGACCTTGCGGGATTCCTGTATCGAAAAGATCGTTAAC
AAGTTCTATATCCATCTGAAATATTGTATGCTTTTTATCTTTAAATTTCT
TTAAATTTTAGAGAATTTAGTTATCCGTGATGACGTCATTGAAGAAACTA
AACCCATTTGTGAGCGATTGGCTCTTCAAGAGAAAGATTACGTCACTTTA
CTGAAAGTCAAGCAGAAAGAACGAATCAAGGAAGAGTTCGAATCTTTGTG
GAAAAGTAACGATGTCATGAATGGTACGGATGGAAAGTTTCTTTATTGGT
CGGCTGAAGAAAATAATGCATCTGATTGGTTGGTTACAAAAAGGGATCAA
AATGGTAGGCAAGCTGTGAGGGAAGATGGGGAAGAGGAGAAAATAGACAT
TTTGAAACTTTGATATCAATTAGTAAAAGGCATGGTTCAGTTTTATTCCA
AAGCTCTGACGCCCCAAATGATACCCCTCGTTACGCCATCGCACAATTGC
CCTCAAGCAGTAGCGGAGTGGGTGCTTCAGAGCTGGGGGACAAAACTCAT
TTGACCTTTTTGGCGCCCCTATTTTTGTAGGCGCCTGCCCCATTCGACCC
TACCCTTTAAGTACTTGGTCAACGGATTTATTTATACTTTAAGACAATTT
CTTACTGTCTTAAGCCTGTTCAGTTGTTGGAGTAGAAAATGCAGGTAATA
CGAATGAAGATTATTTTCTCAAGATCCTAAGAATAAATTTTCTTAAAAAA
GGATCTACTGTTTACGCGGTAAAAACGTAACACTCTATCATAAGACATAC
ACTGTGGATTTTCCAAAGGTGGTAGCAAAAGGGCGCGAAACACTCAACTG
TTTGTTTTTGTGAGCATTTATTTACTTTTATTAACCCACTGTCACTGGAT
CATTCAAACGACGTACTGAGAAAAGGAGTAATTGGCTCACCTAATGGATT
TTACTTTCCCATTCATAATAAACTGTTTATCAATTTTCAAACTTGTAAGC
GCCACTATGAGCGTACTTCCTTATACGTACAAGAGAAGAGCAAAGTATTT
TATTTGTAATGATTTGTTCGCGCCCCATCCTTTTTAGCGTCCCCTTAAAA
AATTTCTCGCTGAGGGGGCATTGCCCCCCTTGCCCCCCCCTGCCACACCG
CTACTGCCTCAAGACTCTTATGCAAAAACATGTCACTTTGAAATCATAAT
TATTCATATTTTTTTCAGTTTGAACATATCAGCTTGTAAAAATCCGCTAT
TATTTCAAGTCTTGCATTGATAAGTAGCGTATTTTGAAGTTCTCCTGTAA
TTTAGCTGTCAACAACAAAAATCTCGGGTGTCTTTTCCAAAAAGTGTCGT
CAAAGTCTGTTGTTATTTTATTTTGAATAATCGTGGTGAATGGTGGCGTT
TAGATTTATAACGCCCTTAAAACACGCTTTTTTGTAAGAACTAATAAATT
TTGGCTCAGGCTGGGCTAATCTTAATTTTTTGAAATTTTCAGCCTTAAAA
TGTTCTTTTTGTAATATGACTTTAGAACATTTCATTTATTTTGAGCAAAA
TGATATTTAGTTTGTTCTTAGATATTCGGCAGATTGTTTATCATTTGTTC
TTAGTTTCGTGGGCTTAAAAAATTGTTCTTATAAAAAATACGTGTAGCTG
GTTACCCCTAATGGGGGGGGGTTAGTCTGAATCGCAGACCTCTACAAAAC
CGAAGGTAGTATAGCTAAAAGTACAAATTCGATTGTTTTCGTTAGAGGAT
GCAAGCTGCCTATAATGGGGATATAATTTATTTTTCTCATTTAAGACAAT
ATTTTGAACGCCGTTCCCAGTAGGTTAAGGGCCACACAGGATCTGTGACA
ATGGGGCGTAAGGGAAGAAGCAATATCACCGAAGAACTTAATCTTCATTT
TTTTTACAATATTTTTAAATAGTAATAATTTATTATCCAACAAAGTCTTT
CTTTTGGTTCCAGCTTTGTACAGTCTGTTTATATAAAAGAAAAATATATA
AAGCATTTTCAAATATTATTTTTTTCATAATATTCTTTTCTCTAAACTAT
AATAATCATAAACTATAATCGAGGCATCCCGTTACCTTAAAGGTACAATC
ATGGTCGAAATATATTGAGAATTCCGGTTATTTTAACGTTTTTTCAAGAT
TTAAAGTTCCGGCGAGAAAGTCGATTTTGGGCTATCTCTTTAATTTAATC
GAATATTTCAATTTGGGAGATCCCAAGGTCCTAAGTCTAGCGTTAAAACT
CAGCGTTAAAACTCTACCCCTCGAACCTACTTTAGAGCACTTACAAATCA
ATTGTGGTTTCAAAACTTCCTGGGGAATTTTCCTTTTTTCTCAAATATTA
TGACCTTGATTGTAAATTAATCTATCTTTTGCTCAAAATTGCAGTTGAAT
AATGATTCAAAAAAGTTGTAAAAGAGGTGGCTTGTACGGGTCTGACGGTC
TGACGGTATCAACTGTCGCTGTTTTGATGGCGGTATTCCAATAAAATAAA
AAGGGTATTTCGGGTGTTCACGGCTCCCCGTCTAAAGGTATTTTTTAGGT
TCAAACTTTTGTTAATTGTAGCTTTTCTGTCAGTACTTAGGTAGTGCCCT
TTTTTCAAACGAATCGTCTCTAGCTCTCTTAAAAAGTTATAAGGATTTAA
AATATAAGGACAAGTACCTCTTTAAAAAGTAAACCGGATAATGCACGCCA
TTATATCTCGGGAGCCCCAAAAGAAGCCTAACCAGACGTAATTAATCGAA
CAGTTCGATTACTGAACTAATCGAACTTTGTCGACTTTAATCGAACGACA
AAGTTTGATTAAATTAATTAATCAAACTTTTCAAAAGTTGCTAAAATTGT
GAGTATTCGATTATGATTTAGTTCGACAAAGTTCGATTAAAAATACAGTT
CGATTGGTTTGATTAATTACGTCTGGGCCTAACAAGGGGGCACCACACTG
CCATTTTTTTTCTACGCTAACATAGTTTGCACCCCCTTTGGGTGCACCAA
CCAGGGCCTTTGTAAAGGGGGAGCTACAAAGTTTCAAATTACGCGGGAGA
GCATAATGAGTGCCAACACACACCTCAATGTTCGACGTGTCACCTATAAT
CTTATGTCACAATTATGGTGCCCAATCCCTCTCATTATAATTTGAAATCA
TTTTTAAAAGTTTAAAAATTCTCTTTGAACTGAAAACAAGACTGGTTAGT
CTCATAAATTTCCATTAGAGGGGGTTTATCTAAAGAATCCAGCATTACTA
AAAATAGACAAAAAGAACGACAAATTTCATAAAAAACGACATATTTCGCC
GTCCACAACCCCGGCGACTGAAAGTGACTGTACCACCCCTAGCGATTCAT
TCCCCTTCGTTTATCACGGGAATTAACTACATGTGGTCTAAAAGAACGAC
AAATTACGCATGCGTGTTACAATGCAGGATCCTTTAGAGGAACAGACTGT
TAGAGTGTAAGAAGAATGAAACTTTCCTTTGCTTCCATAGTAATACAAAA
ATATATTGGCCATTGTTATTAACATTTAAGACTGGATTGGAACTAGTTTT
GTTATGTGACGGGAATGTCCGAGGCTGTTAAAATGGGACCCTTGGACCGC
ACATAACCGACAACCATTATGCCTAAGTCCCCGGGTACAAAGTCCTGACC
ACATTGAATCTAGCTCATACATCAGCAAATCCAAACTGACACAACGCGTC
CAAAGTCCAAATAACATCCATGTAACGTCCAAATAACGTTATCTAGACGT
TAAAACAATGTCACGTGTCAGCTTTTCGAGGAATGTGCTTCTGCTCCAAT
TATATTATCATTCGATCCCACTTCTTCATGACAATGCATTGTTCTGGAAC
CTAACTGGTCGGCAATAATCTTGGAATGTCCGACTAATTAGTATATAAGT
CAATAGATTTCCTTTTCCTTTGACTGGTACATAACCTCTCTGTTCGAACT
CAAAACCACGATCTTTCAATACTTCATATGTGTCCCCCAACACCTGAA

Coding sequence (CDS) from alignment at sc0000163:304239..311636-

>TCONS_00013255 ID=TCONS_00013255|Name=TCONS_00013255|organism=Clytia hemisphaerica|type=CDS|length=8145bp|location=Sequence derived from alignment at sc0000163:304239..311636- (Clytia hemisphaerica)
AGAATTTAGTTATCCGTGATGACGTCATTGAAGAAACTAAACCCATTTGT
GAGCGATTGGCTCTTCAAGAGAAAGATTACGTCACTTTACTGAAAGTCAA
GCAGAAAGAACGAATCAAGGAAGAGTTCGAATCTTTGTGGAAAAGTAACG
ATGTCATGAATGGTACGGATGGAAAGTTTCTTTATTGGTCGGCTGAAGAA
AATAATGCATCTGATTGGTTGGTTACAAAAAGGGATCAAAATGGTAGGCA
AGCTGTGAGGGAAGATGGGGAAGAGGAGAAAATAGACATTTTGAAACTTT
GAGCGAAGATTCGTAGTTGGAACAAAGAAGACGTAGCACTATACGAATAC
TTCAATAAGACGTTGTGGAGGACTATCCGTGAAAACGAGGATCCTTTGTT
TTGGAATGATGTCAAAACGTTGAAGGAAATGAATGGAAAAATAAACAAGG
AATGCTTTGTAGAAGAAAACGCCCAATTATTTGATCTCGGTTATGAAGTT
GGCGATTACCGGACAAAGAATGATTTGAAGGAGATTCTGAACGATATTGA
TGAAGAAATGAGTATGGTAATGATGAACGAATATCTTGATGAATCATTAG
TGCTATTGCAGAGATTGTTATGTTGGCAATTGGCTGATATGGTACACCTC
AAACGCCGTATAACCAAGCAAGAGAAATATCATCTTTCATCTAACGTTAA
GACTTCCAGAATGTTCGGAAGAAAAGCCAGCTCAAAGAATCGCATTGTCA
GCACTTCACCACACAGATGACGATCAAATACTCAATAACATTTTTTATAG
ATACGGAGACTTTAACAATCTATATTTCGCATTACCAAAAGCACCTACAT
TCGAATATTATTGGCCGCTTAGATTCAATCCGTCATTCGTTGATAAGCTT
TTGATGCATCAATCGAAACCAAATTTTATAGTCAATTCTGCTCGTAATAG
CCAAGGAAAGCTGCGCGGAATGTTGTCCTCGAAAACTTTATTTTTGACGA
TGTTACGGGACCCTGTGAAACATTTTCGAGATATTTATGAAAAAATCGAC
ATGAGTAAGCTTATGAAATCGATTCATAAGACGAATTCAGATATTGAAAA
CTTTAAAGAGTTTATTGAAAGACCTTTGGCTAATATTGATCAGATTTTGA
ACACAACGAAAAAGTTCTATCCACAGTTTCACCTGCTGAAAAATCATGAA
ATCTGCCATTTTACAACTGATTTTTTTGTTCAGTTTTTTGACACTGGTAA
TTCTAATATTAAACTACTACACCATCGGTGGATCTAACGTGAGTCATAAA
GCATCGAATATCATTAATCTGGCGTTTGAACATAAAATACAGTATCTAAC
ATCCAAACGGTCCACGATTAAGAGAATAAATGTCAGACAACGGTTGGTAA
ATGACATTGGTATAGTAATAGCAGAAGAGCAGCCAGATTTACAAGAAATT
AACACACTTTATAAAGACGTTGATATTGACACTTTAAAGAAACAAAGGAA
TAATACAACTTCTTCAACGACGGTGGTGAACCAAGCTCTGGTTTTGTCGT
CTATCATTGAACATGATCCAACCATTGATGAAAATGCTCTTCCACTGTCC
TTCAAGTATTATGATAACTCAAGACGAAGAGAATTTAGTTATCCGTGATG
ACGTCATTGAAGAAACTAAACCCATTTGTGAGCGATTGGCTCTTCAAGAG
AAAGATTACGTCACTTTACTGAAAGTCAAGCAGAAAGAACGAATCAAGGA
AGAGTTCGAATCTTTGTGGAAAAGTAACGATGTCATGAATGGTACGGATG
GAAAGTTTCTTTATTGGTCGGCTGAAGAAAATAATGCATCTGATTGGTTG
GTTACAAAAAGGGATCAAAATGGTAGGCAAGCTGTGAGGGAAGATGGGGA
AGAGGAGAAAATAGACATTTTGAAACTTTGAGCGAAGATTCGTAGTTGGA
ACAAAGAAGACGTAGCACTATACGAATACTTCAATAAGACGTTGTGGAGG
ACTATCCGTGAAAACGAGGATCCTTTGTTTTGGAATGATGTCAAAACGTT
GAAGGAAATGAATGGAAAAATAAACAAGGAATGCTTTGTAGAAGAAAACG
CCCAATTATTTGATCTCGGTTATGAAGTTGGCGATTACCGGACAAAGAAT
GATTTGAAGGAGATTCTGAACGATATTGATGAAGAAATGAGTATGGTAAT
GATGAACGAATATCTTGATGAATCATTAGTGCTATTGCAGAGATTGTTAT
GTTGGCAATTGGCTGATATGGTACACCTCAAACGCCGTATAACCAAGCAA
GAGAAATATCATCTTTCATCTAACGTTAAGACTTCCAGAATGTTCGGAAG
AAAAGCCAGCTCAAAGAATCGCATTGTCAGCACTTCACCACACAGATGAC
GATCAAATACTCAATAACATTTTTTATAGATACGGAGACTTTAACAATCT
ATATTTCGCATTACCAAAAGCACCTACATTCGAATATTATTGGCCGCTTA
GATTCAATCCGTCATTCGTTGATAAGCTTTTGATGCATCAATCGAAACCA
AATTTTATAGTCAATTCTGCTCGTAATAGCCAAGGAAAGCTGCGCGGAAT
GTTGTCCTCGAAAACTTTATTTTTGACGATGTTACGGGACCCTGTGAAAC
ATTTTCGAGATATTTATGAAAAAATCGACATGAGTAAGCTTATGAAATCG
ATTCATAAGACGAATTCAGATATTGAAAACTTTAAAGAGTTTATTGAAAG
ACCTTTGGCTAATATTGATCAGATTTTGAACACAACGAAAAAGTTCTATC
CACAGTTTCACCTGCTGAAAAATCATGAAATCTGCCATTTTACAACTGAT
TTTTTTGTTCAGTTTTTTGACACTGGTAATTCTAATATTAAACTACTACA
CCATCGGTGGATCTAACGTGAGTCATAAAGCATCGAATATCATTAATCTG
GCGTTTGAACATAAAATACAGTATCTAACATCCAAACGGTCCACGATTAA
GAGAATAAATGTCAGACAACGGTTGGTAAATGACATTGGTATAGTAATAG
CAGAAGAGCAGCCAGATTTACAAGAAATTAACACACTTTATAAAGACGTT
GATATTGACACTTTAAAGAAACAAAGGAATAATACAACTTCTTCAACGAC
GGTGGTGAACCAAGCTCTGGTTTTGTCGTCTATCATTGAACATGATCCAA
CCATTGATGAAAATGCTCTTCCACTGTCCTTCAAGTATTATGATAACTCA
AGACGAAGAGAATTTAGTTATCCGTGATGACGTCATTGAAGAAACTAAAC
CCATTTGTGAGCGATTGGCTCTTCAAGAGAAAGATTACGTCACTTTACTG
AAAGTCAAGCAGAAAGAACGAATCAAGGAAGAGTTCGAATCTTTGTGGAA
AAGTAACGATGTCATGAATGGTACGGATGGAAAGTTTCTTTATTGGTCGG
CTGAAGAAAATAATGCATCTGATTGGTTGGTTACAAAAAGGGATCAAAAT
GGTAGGCAAGCTGTGAGGGAAGATGGGGAAGAGGAGAAAATAGACATTTT
GAAACTTTGAGCGAAGATTCGTAGTTGGAACAAAGAAGACGTAGCACTAT
ACGAATACTTCAATAAGACGTTGTGGAGGACTATCCGTGAAAACGAGGAT
CCTTTGTTTTGGAATGATGTCAAAACGTTGAAGGAAATGAATGGAAAAAT
AAACAAGGAATGCTTTGTAGAAGAAAACGCCCAATTATTTGATCTCGGTT
ATGAAGTTGGCGATTACCGGACAAAGAATGATTTGAAGGAGATTCTGAAC
GATATTGATGAAGAAATGAGTATGGTAATGATGAACGAATATCTTGATGA
ATCATTAGTGCTATTGCAGAGATTGTTATGTTGGCAATTGGCTGATATGG
TACACCTCAAACGCCGTATAACCAAGCAAGAGAAATATCATCTTTCATCT
AACGTTAAGACTTCCAGAATGTTCGGAAGAAAAGCCAGCTCAAAGAATCG
CATTGTCAGCACTTCACCACACAGATGACGATCAAATACTCAATAACATT
TTTTATAGATACGGAGACTTTAACAATCTATATTTCGCATTACCAAAAGC
ACCTACATTCGAATATTATTGGCCGCTTAGATTCAATCCGTCATTCGTTG
ATAAGCTTTTGATGCATCAATCGAAACCAAATTTTATAGTCAATTCTGCT
CGTAATAGCCAAGGAAAGCTGCGCGGAATGTTGTCCTCGAAAACTTTATT
TTTGACGATGTTACGGGACCCTGTGAAACATTTTCGAGATATTTATGAAA
AAATCGACATGAGTAAGCTTATGAAATCGATTCATAAGACGAATTCAGAT
ATTGAAAACTTTAAAGAGTTTATTGAAAGACCTTTGGCTAATATTGATCA
GATTTTGAACACAACGAAAAAGTTCTATCCACAGTTTCACCTGCTGAAAA
ATCATGAAATCTGCCATTTTACAACTGATTTTTTTGTTCAGTTTTTTGAC
ACTGGTAATTCTAATATTAAACTACTACACCATCGGTGGATCTAACGTGA
GTCATAAAGCATCGAATATCATTAATCTGGCGTTTGAACATAAAATACAG
TATCTAACATCCAAACGGTCCACGATTAAGAGAATAAATGTCAGACAACG
GTTGGTAAATGACATTGGTATAGTAATAGCAGAAGAGCAGCCAGATTTAC
AAGAAATTAACACACTTTATAAAGACGTTGATATTGACACTTTAAAGAAA
CAAAGGAATAATACAACTTCTTCAACGACGGTGGTGAACCAAGCTCTGGT
TTTGTCGTCTATCATTGAACATGATCCAACCATTGATGAAAATGCTCTTC
CACTGTCCTTCAAGTATTATGATAACTCAAGACGAAGAGAATTTAGTTAT
CCGTGATGACGTCATTGAAGAAACTAAACCCATTTGTGAGCGATTGGCTC
TTCAAGAGAAAGATTACGTCACTTTACTGAAAGTCAAGCAGAAAGAACGA
ATCAAGGAAGAGTTCGAATCTTTGTGGAAAAGTAACGATGTCATGAATGG
TACGGATGGAAAGTTTCTTTATTGGTCGGCTGAAGAAAATAATGCATCTG
ATTGGTTGGTTACAAAAAGGGATCAAAATGGTAGGCAAGCTGTGAGGGAA
GATGGGGAAGAGGAGAAAATAGACATTTTGAAACTTTGAGCGAAGATTCG
TAGTTGGAACAAAGAAGACGTAGCACTATACGAATACTTCAATAAGACGT
TGTGGAGGACTATCCGTGAAAACGAGGATCCTTTGTTTTGGAATGATGTC
AAAACGTTGAAGGAAATGAATGGAAAAATAAACAAGGAATGCTTTGTAGA
AGAAAACGCCCAATTATTTGATCTCGGTTATGAAGTTGGCGATTACCGGA
CAAAGAATGATTTGAAGGAGATTCTGAACGATATTGATGAAGAAATGAGT
ATGGTAATGATGAACGAATATCTTGATGAATCATTAGTGCTATTGCAGAG
ATTGTTATGTTGGCAATTGGCTGATATGGTACACCTCAAACGCCGTATAA
CCAAGCAAGAGAAATATCATCTTTCATCTAACGTTAAGACTTCCAGAATG
TTCGGAAGAAAAGCCAGCTCAAAGAATCGCATTGTCAGCACTTCACCACA
CAGATGACGATCAAATACTCAATAACATTTTTTATAGATACGGAGACTTT
AACAATCTATATTTCGCATTACCAAAAGCACCTACATTCGAATATTATTG
GCCGCTTAGATTCAATCCGTCATTCGTTGATAAGCTTTTGATGCATCAAT
CGAAACCAAATTTTATAGTCAATTCTGCTCGTAATAGCCAAGGAAAGCTG
CGCGGAATGTTGTCCTCGAAAACTTTATTTTTGACGATGTTACGGGACCC
TGTGAAACATTTTCGAGATATTTATGAAAAAATCGACATGAGTAAGCTTA
TGAAATCGATTCATAAGACGAATTCAGATATTGAAAACTTTAAAGAGTTT
ATTGAAAGACCTTTGGCTAATATTGATCAGATTTTGAACACAACGAAAAA
GTTCTATCCACAGTTTCACCTGCTGAAAAATCATGAAATCTGCCATTTTA
CAACTGATTTTTTTGTTCAGTTTTTTGACACTGGTAATTCTAATATTAAA
CTACTACACCATCGGTGGATCTAACGTGAGTCATAAAGCATCGAATATCA
TTAATCTGGCGTTTGAACATAAAATACAGTATCTAACATCCAAACGGTCC
ACGATTAAGAGAATAAATGTCAGACAACGGTTGGTAAATGACATTGGTAT
AGTAATAGCAGAAGAGCAGCCAGATTTACAAGAAATTAACACACTTTATA
AAGACGTTGATATTGACACTTTAAAGAAACAAAGGAATAATACAACTTCT
TCAACGACGGTGGTGAACCAAGCTCTGGTTTTGTCGTCTATCATTGAACA
TGATCCAACCATTGATGAAAATGCTCTTCCACTGTCCTTCAAGTATTATG
ATAACTCAAGACGAAGAGAATTTAGTTATCCGTGATGACGTCATTGAAGA
AACTAAACCCATTTGTGAGCGATTGGCTCTTCAAGAGAAAGATTACGTCA
CTTTACTGAAAGTCAAGCAGAAAGAACGAATCAAGGAAGAGTTCGAATCT
TTGTGGAAAAGTAACGATGTCATGAATGGTACGGATGGAAAGTTTCTTTA
TTGGTCGGCTGAAGAAAATAATGCATCTGATTGGTTGGTTACAAAAAGGG
ATCAAAATGGTAGGCAAGCTGTGAGGGAAGATGGGGAAGAGGAGAAAATA
GACATTTTGAAACTTTGAGCGAAGATTCGTAGTTGGAACAAAGAAGACGT
AGCACTATACGAATACTTCAATAAGACGTTGTGGAGGACTATCCGTGAAA
ACGAGGATCCTTTGTTTTGGAATGATGTCAAAACGTTGAAGGAAATGAAT
GGAAAAATAAACAAGGAATGCTTTGTAGAAGAAAACGCCCAATTATTTGA
TCTCGGTTATGAAGTTGGCGATTACCGGACAAAGAATGATTTGAAGGAGA
TTCTGAACGATATTGATGAAGAAATGAGTATGGTAATGATGAACGAATAT
CTTGATGAATCATTAGTGCTATTGCAGAGATTGTTATGTTGGCAATTGGC
TGATATGGTACACCTCAAACGCCGTATAACCAAGCAAGAGAAATATCATC
TTTCATCTAACGTTAAGACTTCCAGAATGTTCGGAAGAAAAGCCAGCTCA
AAGAATCGCATTGTCAGCACTTCACCACACAGATGACGATCAAATACTCA
ATAACATTTTTTATAGATACGGAGACTTTAACAATCTATATTTCGCATTA
CCAAAAGCACCTACATTCGAATATTATTGGCCGCTTAGATTCAATCCGTC
ATTCGTTGATAAGCTTTTGATGCATCAATCGAAACCAAATTTTATAGTCA
ATTCTGCTCGTAATAGCCAAGGAAAGCTGCGCGGAATGTTGTCCTCGAAA
ACTTTATTTTTGACGATGTTACGGGACCCTGTGAAACATTTTCGAGATAT
TTATGAAAAAATCGACATGAGTAAGCTTATGAAATCGATTCATAAGACGA
ATTCAGATATTGAAAACTTTAAAGAGTTTATTGAAAGACCTTTGGCTAAT
ATTGATCAGATTTTGAACACAACGAAAAAGTTCTATCCACAGTTTCACCT
GCTGAAAAATCATGAAATCTGCCATTTTACAACTGATTTTTTTGTTCAGT
TTTTTGACACTGGTAATTCTAATATTAAACTACTACACCATCGGTGGATC
TAACGTGAGTCATAAAGCATCGAATATCATTAATCTGGCGTTTGAACATA
AAATACAGTATCTAACATCCAAACGGTCCACGATTAAGAGAATAAATGTC
AGACAACGGTTGGTAAATGACATTGGTATAGTAATAGCAGAAGAGCAGCC
AGATTTACAAGAAATTAACACACTTTATAAAGACGTTGATATTGACACTT
TAAAGAAACAAAGGAATAATACAACTTCTTCAACGACGGTGGTGAACCAA
GCTCTGGTTTTGTCGTCTATCATTGAACATGATCCAACCATTGATGAAAA
TGCTCTTCCACTGTCCTTCAAGTATTATGATAACTCAAGACGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007398XLOC_007398Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013255-exon-sc0000163-1575043694:311132..311636TCONS_00013255-exon-sc0000163-1575043694:311132..311636Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1575043694:310318..310811TCONS_00013255-exon-sc0000163-1575043694:310318..310811Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1575043694:309173..309402TCONS_00013255-exon-sc0000163-1575043694:309173..309402Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1575043694:308364..308532TCONS_00013255-exon-sc0000163-1575043694:308364..308532Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1575043694:304239..308125TCONS_00013255-exon-sc0000163-1575043694:304239..308125Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1510915933:311132..311636TCONS_00013255-exon-sc0000163-1510915933:311132..311636Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1510915933:310318..310811TCONS_00013255-exon-sc0000163-1510915933:310318..310811Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1510915933:309173..309402TCONS_00013255-exon-sc0000163-1510915933:309173..309402Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1510915933:308364..308532TCONS_00013255-exon-sc0000163-1510915933:308364..308532Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1510915933:304239..308125TCONS_00013255-exon-sc0000163-1510915933:304239..308125Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1491911889:311132..311636TCONS_00013255-exon-sc0000163-1491911889:311132..311636Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1491911889:310318..310811TCONS_00013255-exon-sc0000163-1491911889:310318..310811Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1491911889:309173..309402TCONS_00013255-exon-sc0000163-1491911889:309173..309402Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1491911889:308364..308532TCONS_00013255-exon-sc0000163-1491911889:308364..308532Clytia hemisphaericaexon
TCONS_00013255-exon-sc0000163-1491911889:304239..308125TCONS_00013255-exon-sc0000163-1491911889:304239..308125Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013255-proteinTCONS_00013255-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000163supercontigsc0000163:304239..311636 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.368841	0.345981	0.308237	0.388209	1.24746	1.07296	1.23935	1.43786	1.1397	0.432265	1.72809	1.37617	1.32479	1.11188	1.2115	2.2378	1.422	1.59215	0.0981475	0.0728166	0.845688	1.04538	0.734539	0.612549	0.583996	0.929061	0.309246	0.262189	0.194347	0.271741
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009729Gal-3-0_sulfotransfrase
Vocabulary: Biological Process
TermDefinition
GO:0009247glycolipid biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0005794Golgi apparatus
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0001733galactosylceramide sulfotransferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009247 glycolipid biosynthetic process
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0001733 galactosylceramide sulfotransferase activity
Blast
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BLAST of TCONS_00013255 vs. Swiss-Prot (Human)
Match: G3ST1 (Galactosylceramide sulfotransferase OS=Homo sapiens GN=GAL3ST1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.521e-19
Identity = 84/319 (26.33%), Postives = 150/319 (47.02%), Query Frame = 3 
Query:  519 SEEKPAQRIALSALHHTDDDQILNNIFYRYGDFNNLYFALPKAPT-FEYYWPLRFNPSFVDKLLMHQSKP----NFIVNSARNSQGKLRGMLSSKTLFLTMLRDPVKHFRDIYEKIDMSKLMKSIHKTNSDIENFKEFIERPLANIDQILNTTKKFYPQFHLLKNPQLFDLGYEVGDYRTKNDLKEILNDIDEEMSMVMMNEYLDESXXXXXXXXXXXXADMVHLK---RRITKQEKYHLSSNVKAKIRSWNKEDVALYEYFNKTLWRTIRENEDPLFWNDVKTLKEMNGKINKECF--VEENENLVIRDDVIEETKPI 1445
             E +P + I     H T    +LN I +R+G  + L FA P     F+Y       P+F  + L+   +P    N I N  R    ++RG++ +  +F+T+LRDP + F   +       ++    K ++  +   EF++ P    D+  +         H L+N   FDLGY+     +   ++E + +++    +V++ EY DESLVLL+ LLCW+L D+++ K   RR +   +  LS  +  +  +WN  D  LY +FN + WR +          +V  L+  N ++   C       +   I+D+ ++  +P+
Sbjct:   70 GECQPRRNIVFLKTHKTASSTLLN-ILFRFGQKHRLKFAFPNGRNDFDY-------PTFFARSLVQDYRPGACFNIICNHMRFHYDEVRGLVPTNAIFITVLRDPARLFESSFHYF--GPVVPLTWKLSAG-DKLTEFLQDP----DRYYDPNGF---NAHYLRNLLFFDLGYDNSLDPSSPQVQEHILEVERRFHLVLLQEYFDESLVLLKDLLCWELEDVLYFKLNARRDSPVPR--LSGELYGRATAWNMLDSHLYRHFNASFWRKVEAFGRERMAREVAALRHANERMRTICIDGGHAVDAAAIQDEAMQPWQPL 368
The following BLAST results are available for this feature:
BLAST of TCONS_00013255 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
G3ST19.521e-1926.33Galactosylceramide sulfotransferase OS=Homo sapien... [more]
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