TCONS_00013289 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013289
Unique NameTCONS_00013289
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3117

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013289 ID=TCONS_00013289|Name=TCONS_00013289|organism=Clytia hemisphaerica|type=transcript|length=3117bp
AATCTTTACATAGACTGTTTACACATCTCCGCCTGGTTTCAACTTTAATG
TTTTACAAATCTAATTCTGGTCTGAATCAAAGTTAACTCAAGGCTTGTTG
AACGATTTTTTAAGCATAATAGTTTATGGGGTGATAACAGAGATTCTGAT
AAGGTTTATTTGTAAGTCATCTCATcaatcattctttttttaaccctttt
tttTCGGGCAAAACCTTCAGAGAAaggacagatccagaaatacaTCGCAG
AACTTGGCCGTGCAAAACAACAACATAAAGAGTTGGTGACGGACTACAAA
ACGAACACACAACATGTGATGAACGTCGACCAAGACATTGGTGGTCCTCG
ACTAAGAGACATCATCGACCGTGATGGCGAACCGACCAAAGAACAAACAT
TGAATAATCTTTTACGGCGATTGGAAGAAAAACGTTCGTCCATCGGAAGG
GCGCATGAAATACTGgCAATGTCAAACGAACAGTTGAAGGAAGAGAAGTT
AGCTGTTCAAAAAGCTCTACTACAATACGAAAACATTCATGGAAGACCGg
caTCAAAAGAAGATAAAACGCTCATGAGACCAATATACGACCGTTATCGA
AAAATCAAACGACTCATTGCTGCTTATAAGGACGATGGGACGATAGAGGA
GCAAGATAGCAACATCAAAACGATCTACCAAAGCGATAATAATGAAGTGT
CGGATTTCGGAAGATCACGTGACCGTGCTAATTCCACAACACCTGAAAAC
GTTCTAACGGACGACCAAACACCTCATCAACACATCATGGATGATTCCAC
TCTTCCGGGTGATACCTTCTCCGTAACAAACCGGTTACAGTATACTCCAG
AACCCTTCTCACCGACGCCGCTCGAATCGCTGCAAAATTTCGATGAATCA
GTNGGAACCCTTCTCACCGACGCCGCTTGAATCGCTGCAGAATTTTGATG
AATCAGTATTACATAATGCTTCGATGAGCGAGTTAATGGAACAGCTGAAG
GAAACGAAGAGCTCAAAGAAGAAGCTTGGTAAAACGTTAAAAGATTTCGA
AGATGAATTCTATTTAGCCAATGATCGAAAAGTACAAAAAGAAGACCGTT
TGCCACACGAAGCCGAATATAGAGAATATAAGCTCATCAAAGCCAAGTTA
CGTCTATTGGAAGCTCTAATCTCGAAGAGGAAAAACGGTGAGTCGTTCTG
AAAGCTATTGCCCGGATCATCGGCTGTCGCCCAAATGGATGTTCCTGAGG
TTTGAAGATGACGTTTGTAATCCTTTGGTAACAAGTTCATCGTAGGAAGA
TAACAGCTTTTTTGACGATTGACATCAATTTGTTGAGGCTTTGTATCGAG
ATTAATCACTGGTATTAGGAACTTCGCTTCCTTTCTTTAGCTTGGACTCG
ACTATGAGAACAAAACAGGCTAGAGCTAGAAGTCGAAATTGAAAAAGGTT
GGTtacgttcaaaacttttttgacaagTTGATGAATGATTGTTTGAAGTG
GATACTGAAGGTTCGTAACTTTGAACATTCGCCATGAAGAAGTTCAAAGA
AGTTTATACATTGAGAGGTTTTACCGGTGATTGGACGGCCATCCCAAATC
TCTCAAACCAGGACCTGAATTACTTTAAAGTCTCCTAATAACTTGCATAG
AAAGATGTACAGTAGaagatttttttgcttttaattgTGAATAATATTGC
AATATGTTGGTCAACTACTTAACACCACTAAAGACATCTATTTCTTGATT
CTAATTTGGAATTAAATCGACAGCCCAGTTTCTACCTGATGGTTGCAGCT
TTTCTTTCGAGTACTTTATGTGGCACAATTCGAAATTTAAGTGAATAGTC
GGGAAATTCGTTGCCtgaaattttcgaaatatagaaatattcgaatgatg
gaagttcgaataagcgagaaaTTGTAGAACGGGCttgtgaaatttttgaa
attgatgtCCTTTAGTAGACTGCTAAGACTGCTAATGGTGGAGATTGTTC
GAGTCTGCAACTGTTAGAGCAAAATGCACAAGTTTTTCGCTCTTCTTCAC
ACCAGATGATAGGCTGCACGCAGCCcctttgatatgttttgatatagggg
gtgCTAATCGTGTATAAAATCCCCATCCgacctgtttcaattttcttaaa
aaggtttAGAAATCTAATGATCATTTTAAGctctagccattcaaattttc
aatttcaaatttgatgaaacttatgatttttcatataaaagaagctaatc
aagtttctaaaattcAATAACACAAAGACGGTACTCTCGGACTGGAATTT
TAAATAAGATGAGCAACCCtcatatcaaaacatatcagagaggatgcatg
cagcctaacTAACCAGATGACTCTGTTAGCCTATATATGTTGAAATGTAA
ATGAACACGTTGAATATTCACCAATCCATTTGTTGACGatcaaaaacctt
taaaaaaagcCTGGGATGATCAAGGCAAGTCTGTATTTGAAGCTGATTTT
TTTGCTCGAAATACCTCTTCAATAAGTCTGGGATGATCGAGGCAAATCTG
GATTgttgaatattgaatttcgCCTGTAAGAAGAATATTGTATATAAATT
AATATATTATTGTTGTTATTAGATAAACTCCCAAAAAggcgaaatttttt
aaatgttaaacagattttttttgcgttttgtcactctatttttcattttc
acaatatcttttcttttttattgattgcaaggaaaatattttctccCGGG
GTAAGAAAACTTAAAGACTCCCTGACCCcctttgaaattgattagataaT
TTGGACAAGCCTATTCCCTTTTGAAGTGTAATTAGGATAAGATTCATGAA
GTTCAGTATTCGTCATTAGTAATTCATGAAAACGTcctttggaaaaatat
tttccttacaAAATTGACACAAATTCAGGAATATTTaaataacaaagaat
ttttttttaagtttacaaaaattgcttatttcaatttttcatttttgttc
atGATCTAACATATTATTATAAAAGAATCAACAAAAACGCTGATTCgaca
gttttttatttattttgttgacaGTTTTGTTTCAAAAAGAATATTTCTCT
TCAAATTTCATCCTTTA
Run BLAST on NCBI

protein sequence of TCONS_00013289-protein

>TCONS_00013289-protein ID=TCONS_00013289-protein|Name=TCONS_00013289-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
MNVDQDIGGPRLRDIIDRDGEPTKEQTLNNLLRRLEEKRSSIGRAHEILA
MSNEQLKEEKLAVQKALLQYENIHGRPASKEDKTLMRPIYDRYRKIKRLI
AAYKDDGTIEEQDSNIKTIYQSDNNEVSDFGRSRDRANSTTPENVLTDDQ
TPHQHIMDDSTLPGDTFSVTNRLQYTPEPFSPTPLESLQNFDESXGTLLT
DAA
Run BLAST on NCBI

transcript from alignment at sc0000164:97481..106789-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013289 ID=TCONS_00013289|Name=TCONS_00013289|organism=Clytia hemisphaerica|type=transcript|length=9309bp|location=Sequence derived from alignment at sc0000164:97481..106789- (Clytia hemisphaerica)
AATCTTTACATAGACTGTTTACACATCTCCGCCTGGTTTCAACTTTAATG
TTTTACAAATCTAATTCTGGTCTGAATCAAAGTTAACTCAAGGCTTGTTG
AACGATTTTTTAAGCATAATAGTTTATGGGGTGATAACAGAGATTCTGAT
AAGGTTTATTTGTAAGTCATCTCATCAATCATTCTTTTTTTAACCCTTTT
TTTTCGGGCAAAACCTTCAGAGAAAGGACAGATCCAGAAATACATCGCAG
AACTTGGCCGTGCAAAACAACAACATAAAGGTTTGTAGCAAAGCTACTTG
TTTGTAAAAAACGTTGATAATTTCCGGCTTAAGTGGCTTCTTGCAGGTCA
AACTCTGTAGGATTGATGACGAAGCATTGTGGGGAAGAGTGCTTACTGTT
TAATTCTCGACTCTTTATATGGATTGCAGCACTCTCCACCATGGGTGAAT
TCTCCTCTCCATCTTCTGATGTAGGTTAATTTGAATAAAATGAATTTCCT
TTCCCTCCAGATCGAACAGCTTCGATCAGATTACGAAATCTGTCCCCTAC
TGTGAACGATCTTTCTCCAACAGTGATAAATTTAGCAATTCATTTTCACT
GACAAAAACTTTAAAACAAATCTTTTGCAATTTTGTAACAATTTTCACGG
ATATCAATTATCCTCCTAAGCAGGGTGTTTTCAATAAGAGGGTGATTGAT
TCAGAGTAAAAATGCGCAGCTGGCTTTTATTTTATCAGTTTTCTCTTTAA
TTCTGTAATTTATCGACTGATCTTTTCGTCTACTTTTTAATTAGCAATCA
ATTTGCTAACATCGTTCGCTTTCGAACCTTCCGAGTTTTTCTTGTTCCTG
TTTGGTTTTGATTCACTTTGGTTATATACTCAAAGGTGCTTATTGCAACC
ACTTTTGAAACTGTTTTGAAGTTTACGTTTCAAAGAATTCGTTACTATTT
GTCCTGGGAATAATTTTCATAATTGATGGAAAATGTTGACCTACCTTGTT
GAAGATAGAGTTCATGGAATATTTCCGAGTGAGTACATCAGAGAATTACC
TTTTTACTGATTTTGTAACCCTGTAGAAACTTGATTGACTTTTGTAAGAC
GTTGCTTTAGACATTTCGAACTTAGAACTCTGTATTAACCCAATGAAGGA
ATACAGAACTCAATAACTTACCTAGTAAATCAACCTCAATTTCATTCTGT
AGAGTTGGTGACGGACTACAAAACGAACACACAACATGTGATGAACGTCG
ACCAAGACATTGGTGGTCCTCGACTAAGAGGTAAAAACGATAAATTATGT
AAACGGGATGAATTTGCTCGAAATTGTTTTGGTGTCTATGAATCAATGTT
TTCCAACCACTTATTCTTTTATGGAAGGCAAAGCGCCCCCTCCCCTGTGC
TTGCTAGTTCTAAATGTGCTTATGACGTGACATTTTCATACTATGCTAAA
AGACATGACAATAAAACAAAATGATCTCAAAATCTTTAGTTCAAACACCT
CTAGACCGGAACATGGTCTTTGGTCTTTTCACCATCCCTGCTTTTCTCAT
TCAGACATCATCGACCGTGATGGCGAACCGACCAAAGAACAAACATTGAA
TAATCTTTTACGGCGATTGGAAGAAAAACGTTCGTCCATCGGAAGGGCGC
ATGAAATACTGGTACGTTTGACTGATTTTGAATATCCAACAACTCTGGAT
ATAATTTTTAGAACTTTCCAATAATACCCCCTTTCTCGATGCCGAAAAAC
AGGATCTTTAAATAGGATCAGAGCATCCATTAGTTAAATTTTAATATTGA
AGAGTTGAGAGCCCCAAAATATTTGTCCTCTATTGAAGTATTGGAACTTC
CTAGGGCCTTGGTGAACCACTGCCTATCTGACGTTGTAATTTTGTAAATT
GCAGTCTCGAGTTTATTCCACTGTCAAAATACTTAAACAGCATAAAGAGC
CACGTTTTTTACACCATCATTTTTATGAGCAGAAGCAAACACATACACCA
GACTCTCGCTTATTTGAACTAATACTATTCGAATATAGTTTGAACCGTAA
ATCTCGAGTCAAGGAAAACCTTCTTAGAATACTTCCTATAATTCGATTCT
CTCTGTAATTCGAACAAATAAGATTCCCCGTTCAAGTTCGAATTAGCGGG
AGTCAACTGTATGATAATTAACACTCTTCGAAATTCACTTTTTTCAGGCA
ATGTCAAACGAACAGTTGAAGGAAGAGAAGTTAGCTGTTCAAAAAGCTCT
ACTACAATACGAAAACATTCATGGAAGACCGGTATGTCATCCTTCTTTCT
ACCCAATAATCCTGATGCGTAGTTTTTATGGCTTTGAAAGTAGGTGACAG
CCTAATCTTAGCTATATAATCTTTTTAGACAAATGCTCTTTTTACAAGAA
CACGGGTCTGAAATTTAATCTAAAACCTAGCAACAAAATAAGACGAATCG
GACAGCGATCTAAAGAAATTTCACAAATGACCCTCTTAAGCTATTAAATA
AACAAACTAAGCGTATTAGAACACCTTCAGAACAAGCCTAAAAATTTCAA
AATATAAGAACTTGCTGAGGCTGGGCGAAGATTTTTAAACATTATTTTTA
ATTGGAATATTTTTCTTTTTTTCAGGCATCAAAAGAAGATAAAACGCTCA
TGAGACCAATATACGACCGTTATCGAAAAATCAAACGACTCATTGCTGCT
TATAAGGTAGGTAAAGTCAATGCACTAAACATGTTCCTTAAGTGGATTAA
AGGCCGGTCTCCACTTGCGCGCGCTTCAATCGCTCTTCTTCGAGCAAAGC
TTCCACGCTATTGGTCAAAAGAAAAATGAAGCAACTCCATTGGNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNAAGCAACTCCATTGGTGCGATATGACGTAACG
ATCGCGCGCTTGAAAAAAAAGTTGAAATACATTCAACTTTTTTTCCAAGC
GCGCGCTGCGTTTTTATAACGTAATCTTTTCTCCAAGCAAAAATGATTGA
AGCCAAAGTTGCGATCGCAGCGCGCGCAAGTGGAGACCGGCCTTAAATCC
CGCATGGATTTATTTTCGCGAAATTTATAGTCCTCGCGAAAAATTTAAAA
TCAGCAATTATGCAAAAACTCCTGGGAAAATGAAAGAAATTAGGTGAAAA
ATAGGCCGATTCGCGAAATTTTGTCCACGCAAAAATTTTAGATTCTCGAT
TCACAAAAAAATTTCACGCCAAATTTAATCCACTCAACGTATTCAACAAG
AAATATTGGTAATTGCTAAAAAGTGCATGAAAATTATTTTATAAATGAGC
TTTATAAATCCTGGAAGCAGTTTCTCAATTCCGACCAAGCAAGATCTTTC
GAGTTTTTTAGAAAATGGTTCCCTGATTGTACCACTACTCGATATAGGTA
TAAATGCACTCAGAGCGCTAGATCTACATTTTCTGGAGTCCTCGATGATG
TAGCGCCGTTTACCATTTATTTATGTGCAATGACTTCTTTGCGGGTATCA
CTTTCAAAAACTCTAAATCAAAGATGTCGGAAATAGTTTAGTTTAGGGTT
TATAAGTGTCAGTGGGTTTTACCCGTCTTAAATACTTTTAAACCTCAAGT
GAATAATATTTAGTTTTTTAACACTTTTTGAATTCACAGGACGATGGGAC
GATAGAGGAGCAAGATAGCAACATCAAAACGATCTACCAAAGCGATAATA
ATGGTATGTAAGCACATTTTTATAAGAACATCCAAACTTTTTGAAGCCTT
TGGATTTTCTCAACTTTTATAAGTTTTAAGACTAAAACTTTTCTTAAAAT
GTTCTTATTTTTAAAATTTGTGAGTATTTATTAAAAAATGGCGAAATAAA
GTTATTTGGGAAAAAACTGATTTGACGTATTGTCCTTTACGGAAGACTTA
TTTTCATTCAGTGTACACGGCTAATAATGTGTTTTTGGACCTACCCCGGT
GGGCTGTAGGTCCTATAAATTAACCTCTGTTCGTCCGTTCGTTCGTCCGT
TTGTTACTAGCTTTTCTCGGGATTGGCTCATTAGTTTTTCCTAATTTTTG
GCACAAAGATGCAAAATGGTAATGCCCAAAATGTGACGGAGCCCGATTTT
CGAAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCTAAA
CGATATATTTTCTGACTGATTTTTTTCTCCTCGCATTGCTATCTAACTTT
CATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTGTTTTTGAAAGAAA
AAGATATAGTGTATCTTTGACAGCAAAGAATATCTAATGTTTTTCTATTA
TCCTCATTCAAATCTCTTTTTAACAGAAGTGTCGGATTTCGGAAGATCAC
GTGACCGTGCTAATTCCACAACACCTGAAAACGTTCTAACGGACGACCAA
ACACCTCATCAACACATCATGGATGATTCCACTCTTCCGGGTGATACCTT
CTCCGTAACAAACCGGTTACAGTATACTCCAGAACCCTTCTCACCGACGC
CGCTCGAATCGCTGCAAAATTTCGATGAATCAGTNGGAACCCTTCTCACC
GACGCCGCTTGAATCGCTGCAGAATTTTGATGAATCAGTATTACATAATG
CTTCGATGTAAGAGATCTCTAATGTTCTTCGTTGTAATTTTTCAATCCTG
GGTTAGAGAAATGTAACTTTTTATGAATTTTCTAACCCCGCCCCTGCAGA
ATTACGTCAATATTTTCCATTACTTGCATTTCTAAAACTTCGAGAATTGT
AAGAAATATCCTTCCATGGTGGCAGCTGGCATACAAAGTTGTTTCAACGT
TCATCTAATGTTTACAGGATCTATATAACGTTAGATTGACGTTGTGTGCC
AGCTGTGAAACTGGTTTTAAAATTTGATTAAATTTTTCTGATGATGAAAC
TTTTTGTTGTTACAGGAGCGAGTTAATGGAACAGCTGAAAGAAACGAAGA
GCTCNGAAACTTTCTGATGATTAAAACTTTTTGTTGTTACAGGAGCGAGT
TAATGGAACAGCTGAAGGAAACGAAGAGCTCAAAGAAGAAGCTTGGTAAA
ACGTTAAAAGATTTCGAAGATGAATTCTATTTAGCCAATGATCGAAAAGT
ACAAAAAGAAGACCGTTTGCCACACGAAGCCGAATATAGAGAATATAAGG
TACGTTATAAGTTGATTGACTTTCGCCTATTTTTCATTGACTGGACTTTC
ATTTTATTTTTACACTATAATCCTTCATTATTATGGAAACACCTGGGAAA
CACTGTCACCGCTATCAAACTATAGCTTGTACAGGCCTGTAAAACTTTCC
AGACCTTAGTAACAGATGAACCCCTAGCGAAAGTACGTACTTAACACTAT
TGCAGGAAATCACGTGATTGCATCCAAAAATGCCACCGCACGTATCCTAA
AAAGTTTTTTATCCTACAATGTCTGAAATCTTAACATAACATCAAATTTA
AGTTTTTTTTTCTCTCGTTTGCAGCTCATCAAAGCCAAGTTACGTCTATT
GGAAGCTCTAATCTCGAAGAGGAAAAACGGTGAGTCGTTCTGAAAGCTAT
TGCCCGGATCATCGGCTGTCGCCCAAATGGATGTTCCTGAGGTTTGAAGA
TGACGTTTGTAATCCTTTGGTAACAAGTTCATCGTAGGAAGATAACAGCT
TTTTTGACGATTGACATCAATTTGTTGAGGCTTTGTATCGAGATTAATCA
CTGGTATTAGGAACTTCGCTTCCTTTCTTTAGCTTGGACTCGACTATGAG
AACAAAACAGGCTAGAGCTAGAAGTCGAAATTGAAAAAGGTTGGTTACGT
TCAAAACTTTTTTGACAAGTTGATGAATGATTGTTTGAAGTGGATACTGA
AGGTTCGTAACTTTGAACATTCGCCATGAAGAAGTTCAAAGAAGTTTATA
CATTGAGAGGTTTTACCGGTGATTGGACGGCCATCCCAAATCTCTCAAAC
CAGGACCTGAATTACTTTAAAGTCTCCTAATAACTTGCATAGAAAGATGT
ACAGTAGAAGATTTTTTTGCTTTTAATTGTGAATAATATTGCAATATGTT
GGTCAACTACTTAACACCACTAAAGACATCTATTTCTTGATTCTAATTTG
GAATTAAATCGACAGCCCAGTTTCTACCTGATGGTTGCAGCTTTTCTTTC
GAGTACTTTATGTGGCACAATTCGAAATTTAAGTGAATAGTCGGGAAATT
CGTTGCCTGAAATTTTCGAAATATAGAAATATTCGAATGATGGAAGTTCG
AATAAGCGAGAAATTGTAGAACGGGCTTGTGAAATTTTTGAAATTGATGT
CCTTTAGTAGACTGCTAAGACTGCTAATGGTGGAGATTGTTCGAGTCTGC
AACTGTTAGAGCAAAATGCACAAGTTTTTCGCTCTTCTTCACACCAGATG
ATAGGCTGCACGCAGCCCCTTTGATATGTTTTGATATAGGGGGTGCTAAT
CGTGTATAAAATCCCCATCCGACCTGTTTCAATTTTCTTAAAAAGGTTTA
GAAATCTAATGATCATTTTAAGCTCTAGCCATTCAAATTTTCAATTTCAA
ATTTGATGAAACTTATGATTTTTCATATAAAAGAAGCTAATCAAGTTTCT
AAAATTCAATAACACAAAGACGGTACTCTCGGACTGGAATTTTAAATAAG
ATGAGCAACCCTCATATCAAAACATATCAGAGAGGATGCATGCAGCCTAA
CTAACCAGATGACTCTGTTAGCCTATATATGTTGAAATGTAAATGAACAC
GTTGAATATTCACCAATCCATTTGTTGACGATCAAAAACCTTTAAAAAAA
GCCTGGGATGATCAAGGCAAGTCTGTATTTGAAGCTGATTTTTTTGCTCG
AAATACCTCTTCAATAAGTCTGGGATGATCGAGGCAAATCTGGATTGTTG
AATATTGAATTTCGCCTGTAAGAAGAATATTGTATATAAATTAATATATT
ATTGTTGTTATTAGATAAACTCCCAAAAAGGCGAAATTTTTTAAATGTTA
AACAGATTTTTTTTGCGTTTTGTCACTCTATTTTTCATTTTCACAATATC
TTTTCTTTTTTATTGATTGCAAGGAAAATATTTTCTCCCGGGGTAAGAAA
ACTTAAAGACTCCCTGACCCCCTTTGAAATTGATTAGATAATTTGGACAA
GCCTATTCCCTTTTGAAGTGTAATTAGGATAAGATTCATGAAGTTCAGTA
TTCGTCATTAGTAATTCATGAAAACGTCCTTTGGAAAAATATTTTCCTTA
CAAAATTGACACAAATTCAGGAATATTTAAATAACAAAGAATTTTTTTTT
AAGTTTACAAAAATTGCTTATTTCAATTTTTCATTTTTGTTCATGATCTA
ACATATTATTATAAAAGAATCAACAAAAACGCTGATTCGACAGTTTTTTA
TTTATTTTGTTGACAGTTTTGTTTCAAAAAGAATATTTCTCTTCAAATTT
CATCCTTTA

Coding sequence (CDS) from alignment at sc0000164:97481..106789-

>TCONS_00013289 ID=TCONS_00013289|Name=TCONS_00013289|organism=Clytia hemisphaerica|type=CDS|length=3672bp|location=Sequence derived from alignment at sc0000164:97481..106789- (Clytia hemisphaerica)
AAGTGTCGGATTTCGGAAGATCACGTGACCGTGCTAATTCCACAACACCT
GAAAACGTTCTAACGGACGACCAAACACCTCATCAACACATCATGGATGA
TTCCACTCTTCCGGGTGATACCTTCTCCGTAACAAACCGGTTACAGTATA
CTCCAGAACCCTTCTCACCGACGCCGCTCGAATCGCTGCAAAATTTCGAT
GAATCAGTNGGAACCCTTCTCACCGACGCCGCTTGAGACGATGGGACGAT
AGAGGAGCAAGATAGCAACATCAAAACGATCTACCAAAGCGATAATAATG
GCATCAAAAGAAGATAAAACGCTCATGAGACCAATATACGACCGTTATCG
AAAAATCAAACGACTCATTGCTGCTTATAAGGCAATGTCAAACGAACAGT
TGAAGGAAGAGAAGTTAGCTGTTCAAAAAGCTCTACTACAATACGAAAAC
ATTCATGGAAGACCGACATCATCGACCGTGATGGCGAACCGACCAAAGAA
CAAACATTGAATAATCTTTTACGGCGATTGGAAGAAAAACGTTCGTCCAT
CGGAAGGGCGCATGAAATACTGATGAACGTCGACCAAGACATTGGTGGTC
CTCGACTAAGAGAAGTGTCGGATTTCGGAAGATCACGTGACCGTGCTAAT
TCCACAACACCTGAAAACGTTCTAACGGACGACCAAACACCTCATCAACA
CATCATGGATGATTCCACTCTTCCGGGTGATACCTTCTCCGTAACAAACC
GGTTACAGTATACTCCAGAACCCTTCTCACCGACGCCGCTCGAATCGCTG
CAAAATTTCGATGAATCAGTNGGAACCCTTCTCACCGACGCCGCTTGAGA
CGATGGGACGATAGAGGAGCAAGATAGCAACATCAAAACGATCTACCAAA
GCGATAATAATGGCATCAAAAGAAGATAAAACGCTCATGAGACCAATATA
CGACCGTTATCGAAAAATCAAACGACTCATTGCTGCTTATAAGGCAATGT
CAAACGAACAGTTGAAGGAAGAGAAGTTAGCTGTTCAAAAAGCTCTACTA
CAATACGAAAACATTCATGGAAGACCGACATCATCGACCGTGATGGCGAA
CCGACCAAAGAACAAACATTGAATAATCTTTTACGGCGATTGGAAGAAAA
ACGTTCGTCCATCGGAAGGGCGCATGAAATACTGATGAACGTCGACCAAG
ACATTGGTGGTCCTCGACTAAGAGAAGTGTCGGATTTCGGAAGATCACGT
GACCGTGCTAATTCCACAACACCTGAAAACGTTCTAACGGACGACCAAAC
ACCTCATCAACACATCATGGATGATTCCACTCTTCCGGGTGATACCTTCT
CCGTAACAAACCGGTTACAGTATACTCCAGAACCCTTCTCACCGACGCCG
CTCGAATCGCTGCAAAATTTCGATGAATCAGTNGGAACCCTTCTCACCGA
CGCCGCTTGAGACGATGGGACGATAGAGGAGCAAGATAGCAACATCAAAA
CGATCTACCAAAGCGATAATAATGGCATCAAAAGAAGATAAAACGCTCAT
GAGACCAATATACGACCGTTATCGAAAAATCAAACGACTCATTGCTGCTT
ATAAGGCAATGTCAAACGAACAGTTGAAGGAAGAGAAGTTAGCTGTTCAA
AAAGCTCTACTACAATACGAAAACATTCATGGAAGACCGACATCATCGAC
CGTGATGGCGAACCGACCAAAGAACAAACATTGAATAATCTTTTACGGCG
ATTGGAAGAAAAACGTTCGTCCATCGGAAGGGCGCATGAAATACTGATGA
ACGTCGACCAAGACATTGGTGGTCCTCGACTAAGAGAAGTGTCGGATTTC
GGAAGATCACGTGACCGTGCTAATTCCACAACACCTGAAAACGTTCTAAC
GGACGACCAAACACCTCATCAACACATCATGGATGATTCCACTCTTCCGG
GTGATACCTTCTCCGTAACAAACCGGTTACAGTATACTCCAGAACCCTTC
TCACCGACGCCGCTCGAATCGCTGCAAAATTTCGATGAATCAGTNGGAAC
CCTTCTCACCGACGCCGCTTGAGACGATGGGACGATAGAGGAGCAAGATA
GCAACATCAAAACGATCTACCAAAGCGATAATAATGGCATCAAAAGAAGA
TAAAACGCTCATGAGACCAATATACGACCGTTATCGAAAAATCAAACGAC
TCATTGCTGCTTATAAGGCAATGTCAAACGAACAGTTGAAGGAAGAGAAG
TTAGCTGTTCAAAAAGCTCTACTACAATACGAAAACATTCATGGAAGACC
GACATCATCGACCGTGATGGCGAACCGACCAAAGAACAAACATTGAATAA
TCTTTTACGGCGATTGGAAGAAAAACGTTCGTCCATCGGAAGGGCGCATG
AAATACTGATGAACGTCGACCAAGACATTGGTGGTCCTCGACTAAGAGAA
GTGTCGGATTTCGGAAGATCACGTGACCGTGCTAATTCCACAACACCTGA
AAACGTTCTAACGGACGACCAAACACCTCATCAACACATCATGGATGATT
CCACTCTTCCGGGTGATACCTTCTCCGTAACAAACCGGTTACAGTATACT
CCAGAACCCTTCTCACCGACGCCGCTCGAATCGCTGCAAAATTTCGATGA
ATCAGTNGGAACCCTTCTCACCGACGCCGCTTGAGACGATGGGACGATAG
AGGAGCAAGATAGCAACATCAAAACGATCTACCAAAGCGATAATAATGGC
ATCAAAAGAAGATAAAACGCTCATGAGACCAATATACGACCGTTATCGAA
AAATCAAACGACTCATTGCTGCTTATAAGGCAATGTCAAACGAACAGTTG
AAGGAAGAGAAGTTAGCTGTTCAAAAAGCTCTACTACAATACGAAAACAT
TCATGGAAGACCGACATCATCGACCGTGATGGCGAACCGACCAAAGAACA
AACATTGAATAATCTTTTACGGCGATTGGAAGAAAAACGTTCGTCCATCG
GAAGGGCGCATGAAATACTGATGAACGTCGACCAAGACATTGGTGGTCCT
CGACTAAGAGAAGTGTCGGATTTCGGAAGATCACGTGACCGTGCTAATTC
CACAACACCTGAAAACGTTCTAACGGACGACCAAACACCTCATCAACACA
TCATGGATGATTCCACTCTTCCGGGTGATACCTTCTCCGTAACAAACCGG
TTACAGTATACTCCAGAACCCTTCTCACCGACGCCGCTCGAATCGCTGCA
AAATTTCGATGAATCAGTNGGAACCCTTCTCACCGACGCCGCTTGAGACG
ATGGGACGATAGAGGAGCAAGATAGCAACATCAAAACGATCTACCAAAGC
GATAATAATGGCATCAAAAGAAGATAAAACGCTCATGAGACCAATATACG
ACCGTTATCGAAAAATCAAACGACTCATTGCTGCTTATAAGGCAATGTCA
AACGAACAGTTGAAGGAAGAGAAGTTAGCTGTTCAAAAAGCTCTACTACA
ATACGAAAACATTCATGGAAGACCGACATCATCGACCGTGATGGCGAACC
GACCAAAGAACAAACATTGAATAATCTTTTACGGCGATTGGAAGAAAAAC
GTTCGTCCATCGGAAGGGCGCATGAAATACTGATGAACGTCGACCAAGAC
ATTGGTGGTCCTCGACTAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007427XLOC_007427Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013289-proteinTCONS_00013289-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013289-exon-sc0000164-1575043694:106510..106789TCONS_00013289-exon-sc0000164-1575043694:106510..106789Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1575043694:105510..105587TCONS_00013289-exon-sc0000164-1575043694:105510..105587Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1575043694:105129..105235TCONS_00013289-exon-sc0000164-1575043694:105129..105235Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1575043694:104509..104592TCONS_00013289-exon-sc0000164-1575043694:104509..104592Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1575043694:104084..104164TCONS_00013289-exon-sc0000164-1575043694:104084..104164Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1575043694:102487..102550TCONS_00013289-exon-sc0000164-1575043694:102487..102550Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1575043694:100333..100613TCONS_00013289-exon-sc0000164-1575043694:100333..100613Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1575043694:99791..99947TCONS_00013289-exon-sc0000164-1575043694:99791..99947Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1575043694:97481..99465TCONS_00013289-exon-sc0000164-1575043694:97481..99465Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1510915933:106510..106789TCONS_00013289-exon-sc0000164-1510915933:106510..106789Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1510915933:105510..105587TCONS_00013289-exon-sc0000164-1510915933:105510..105587Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1510915933:105129..105235TCONS_00013289-exon-sc0000164-1510915933:105129..105235Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1510915933:104509..104592TCONS_00013289-exon-sc0000164-1510915933:104509..104592Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1510915933:104084..104164TCONS_00013289-exon-sc0000164-1510915933:104084..104164Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1510915933:102487..102550TCONS_00013289-exon-sc0000164-1510915933:102487..102550Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1510915933:100333..100613TCONS_00013289-exon-sc0000164-1510915933:100333..100613Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1510915933:99791..99947TCONS_00013289-exon-sc0000164-1510915933:99791..99947Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1510915933:97481..99465TCONS_00013289-exon-sc0000164-1510915933:97481..99465Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1491911889:106510..106789TCONS_00013289-exon-sc0000164-1491911889:106510..106789Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1491911889:105510..105587TCONS_00013289-exon-sc0000164-1491911889:105510..105587Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1491911889:105129..105235TCONS_00013289-exon-sc0000164-1491911889:105129..105235Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1491911889:104509..104592TCONS_00013289-exon-sc0000164-1491911889:104509..104592Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1491911889:104084..104164TCONS_00013289-exon-sc0000164-1491911889:104084..104164Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1491911889:102487..102550TCONS_00013289-exon-sc0000164-1491911889:102487..102550Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1491911889:100333..100613TCONS_00013289-exon-sc0000164-1491911889:100333..100613Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1491911889:99791..99947TCONS_00013289-exon-sc0000164-1491911889:99791..99947Clytia hemisphaericaexon
TCONS_00013289-exon-sc0000164-1491911889:97481..99465TCONS_00013289-exon-sc0000164-1491911889:97481..99465Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000164supercontigsc0000164:97481..106789 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.17081	7.4996	4.7167	4.46243	16.627	12.277	13.36	16.2542	11.4056	12.742	11.1	11.7886	13.4061	14.2912	5.892	6.99251	12.0622	15.2047	15.2639	14.6825	16.6272	18.3288	7.82069	8.73259	47.5112	32.7377	7.03028	7.48057	7.40128	7.88585
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013289 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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