|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013298 ID=TCONS_00013298|Name=TCONS_00013298|organism=Clytia hemisphaerica|type=transcript|length=1008bp
CTGAGCGCACTACATACGACCAGCGTTCATAGTGTTTATCCGCGAACTCA
GGCATGCGTATGACTAATCGAATCCATTGTGCAAGACGTCCGCGATTCAG
ACCAGCTGAGATGAGTGCTTTCAACATGGCGTCGAAGCTTCGTTTACGTG
TCTCGTGAGTTGTCTTGATTCGATGGAGAACGGTTAGTAGTGACTGAGAG
AGAAGAGAAGAAATGAAGATTTAACAATCGCGTTTGGTTAAACATTAAAC
AAAATCGACTCTTGCATCTTCATGATTTCAGACTACTTTAAACTTTCTTC
cctgcatcatgaaaaagttatATCACCTTTTTATCAAGATTAAAATGCCC
TCAAAATGAccgtctagcaagctagacgactaattcagacataatagaaa
agaagcaaaaaataatgaagggaacaaattttagtttataaaaagtaaat
cccgtaacaataatcgtattatcatataacgcctatactactgtattaca
cgcattatgaaCGACTTCAGTCTATCGCAACGACCGTCCCCGTGTATTCT
AGGCTTTATTTACGCTACTGAAGGACGCCAGGGAATATTTGGCAATATCA
GTAAACATCAAAAATCTTGCAACCAGGTTGATGTCCCAATAATTCGTGAT
ATAGttataaaattctaaaatttgagATTAGAAGGATAAAGAAATAAAGT
CGTTCTTACTTGTTTGGGCGTTTGTTGGGTGCACCCGACATCCATAGCGA
ACGCCTCAGACAGCATCATGCTTGGCTGCTTACTGAACTGTCGTCCATGT
TTCATGTTATAGAAACGATCGAACAATTCCCAAATGTGCATGCCGTGTCC
TTGGGATGTCTTGTTGGACATACAACCGACAAGAGCTTTTGTTGATAAAG
CTTTAGTGGTGAATGACTGGAAAAACAAAAGAGGAgtcaatttcaaatat
ttatcaATGTACAATCCACTCGAATTCGAATCTCTATTAGTCGAATCTTt
ccgtaatt Run BLAST on NCBI transcript from alignment at sc0000164:253232..254297- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013298 ID=TCONS_00013298|Name=TCONS_00013298|organism=Clytia hemisphaerica|type=transcript|length=1066bp|location=Sequence derived from alignment at sc0000164:253232..254297- (Clytia hemisphaerica)
CTGAGCGCACTACATACGACCAGCGTTCATAGTGTTTATCCGCGAACTCA
GGCATGCGTATGACTAATCGAATCCATTGTGCAAGACGTCCGCGATTCAG
ACCAGCTGAGATGAGTGCTTTCAACATGGCGTCGAAGCTTCGTTTACGTG
TCTCGTGAGTTGTCTTGATTCGATGGAGAACGGTTAGTAGTGACTGAGAG
AGAAGAGAAGAAATGAAGATTTAACAATCGCGTTTGGTTAAACATTAAAC
AAAATCGACTCTTGCATCTTCATGATTTCAGACTACTTTAAACTTTCTTC
CCTGCATCATGAAAAAGTTATATCACCTTTTTATCAAGATTAAAATGCCC
TCAAAATGACCGTCTAGCAAGCTAGACGACTAATTCAGACATAATAGAAA
AGAAGCAAAAAATAATGAAGGGAACAAATTTTAGTTTATAAAAAGTAAAT
CCCGTAACAATAATCGTATTATCATATAACGCCTATACTACTGTATTACA
CGCATTATGAACGACTTCAGTCTATCGCAACGACCGTCCCCGTGTATTCT
AGGCTTTATTTACGCTACTGAAGGACGCCAGGGAATATTTGGCAATATCA
GTAAACATCAAAAATCTTGCAACCAGGTTGATGTCCCAATAATTCGTGAT
ATAGTTATAAAATTCTAAAATTTGAGATTAGAAGGATAAAGAAATAAAGT
CGTTCTTACTTGTTTGGGCGTTTGTTGGGTGCACCCGACATCCATGGCGA
ACGCCTCAGACAGCATCATGCTTGGCTGCTTACTGAACTGTNCCGACATC
CATAGCGAACGCCTCAGACAGCATCATGCTTGGCTGCTTACTGAACTGTC
GTCCATGTTTCATGTTATAGAAACGATCGAACAATTCCCAAATGTGCATG
CCGTGTCCTTGGGATGTCTTGTTGGACATACAACCGACAAGAGCTTTTGT
TGATAAAGCTTTAGTGGTGAATGACTGGAAAAACAAAAGAGGAGTCAATT
TCAAATATTTATCAATGTACAATCCACTCGAATTCGAATCTCTATTAGTC
GAATCTTTCCGTAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013298-exon-sc0000164-1575043694:253559..254297 | TCONS_00013298-exon-sc0000164-1575043694:253559..254297 | Clytia hemisphaerica | exon |
| TCONS_00013298-exon-sc0000164-1575043694:253232..253500 | TCONS_00013298-exon-sc0000164-1575043694:253232..253500 | Clytia hemisphaerica | exon |
| TCONS_00013298-exon-sc0000164-1510915933:253559..254297 | TCONS_00013298-exon-sc0000164-1510915933:253559..254297 | Clytia hemisphaerica | exon |
| TCONS_00013298-exon-sc0000164-1510915933:253232..253500 | TCONS_00013298-exon-sc0000164-1510915933:253232..253500 | Clytia hemisphaerica | exon |
| TCONS_00013298-exon-sc0000164-1491911889:253559..254297 | TCONS_00013298-exon-sc0000164-1491911889:253559..254297 | Clytia hemisphaerica | exon |
| TCONS_00013298-exon-sc0000164-1491911889:253232..253500 | TCONS_00013298-exon-sc0000164-1491911889:253232..253500 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000164 | supercontig | sc0000164:253232..254297 - |
Blast
The following BLAST results are available for this feature:
|
