|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013350 ID=TCONS_00013350|Name=TCONS_00013350|organism=Clytia hemisphaerica|type=transcript|length=931bp
ACCCGGTTTTTGTTCGCGGAAAAGGGGgacagtttttctataagaacata
aaacgCTTACGAGCTACTACTTGGTCATTtttgttctttgtttttctttt
gtttaactTTGTCGTGTTTCTGTCGGATGGGGATGGACGTCTGAAGTCTG
TACTGCGAAAAAAAGTTCTGTGAAAATCTTTAAGTTGAAACCCCAAAGGA
AAGAACCTACTCAAAATTGAGTATTGACTGCGTAAAGTTAGTTCCCTTGC
TAAACTAAAGAAACACAAATTAGTTCACGGTcctttatttgtttatttta
tagaaaaaatctatttttggtCTATTTTAATTCGTTTATATCATGACGAG
TAAGTAAACAATTATTTTGCTCACGCTAATTTATGCAAGACATAACAATA
ATAATTATGATAATTTATGCATCTTAATGAAGTTATTAAAAGATTATCTG
TAAATAAGTGGAAATTAGTTTGAACTACTACTCTTATAATTTTAGAATTA
TTATCTGGTTGACGATTACCTCAATTTAATGGCTAATATTAACCTAATTA
CATTTTTTACCAAGGCAAGAAATTCGAAATTTATGGCCACTGGCCTATAA
AGAAAACCTAGATTCACTCTGTCactctgaaaaaaataagaagctCTGTA
ACTAGCAACACAACATCCggttaacgttcatctaacgttaaatggacgtt
agGGACGTCAGATAAACATTGAAACGCTTTCATTCTTgagtttatatttt
ttgaaacaatttttagGTTGTTTAAAATACGAGATTATAGAATTTATGCA
TTCATATTATTTTTAAGATAATAACTTAATTACTTGTAGTATAGAGATGT
AGTCAATGTTTACTAGTaataattcaaaagaaaataatgtatTTGCTTAA
ACAGCAGTAGGGAGGGTGTGGTcctaaaaca Run BLAST on NCBI transcript from alignment at sc0000164:468279..469209 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013350 ID=TCONS_00013350|Name=TCONS_00013350|organism=Clytia hemisphaerica|type=transcript|length=931bp|location=Sequence derived from alignment at sc0000164:468279..469209 (Clytia hemisphaerica)
tgttttaggACCACACCCTCCCTACTGCTGTTTAAGCAAatacattattt
tcttttgaattattACTAGTAAACATTGACTACATCTCTATACTACAAGT
AATTAAGTTATTATCTTAAAAATAATATGAATGCATAAATTCTATAATCT
CGTATTTTAAACAACctaaaaattgtttcaaaaaatataaactcAAGAAT
GAAAGCGTTTCAATGTTTATCTGACGTCCctaacgtccatttaacgttag
atgaacgttaaccGGATGTTGTGTTGCTAGTTACAGagcttcttattttt
ttcagagtGACAGAGTGAATCTAGGTTTTCTTTATAGGCCAGTGGCCATA
AATTTCGAATTTCTTGCCTTGGTAAAAAATGTAATTAGGTTAATATTAGC
CATTAAATTGAGGTAATCGTCAACCAGATAATAATTCTAAAATTATAAGA
GTAGTAGTTCAAACTAATTTCCACTTATTTACAGATAATCTTTTAATAAC
TTCATTAAGATGCATAAATTATCATAATTATTATTGTTATGTCTTGCATA
AATTAGCGTGAGCAAAATAATTGTTTACTTACTCGTCATGATATAAACGA
ATTAAAATAGaccaaaaatagattttttctataaaataaacaaataaagg
ACCGTGAACTAATTTGTGTTTCTTTAGTTTAGCAAGGGAACTAACTTTAC
GCAGTCAATACTCAATTTTGAGTAGGTTCTTTCCTTTGGGGTTTCAACTT
AAAGATTTTCACAGAACTTTTTTTCGCAGTACAGACTTCAGACGTCCATC
CCCATCCGACAGAAACACGACAAagttaaacaaaagaaaaacaaagaaca
aaAATGACCAAGTAGTAGCTCGTAAGcgttttatgttcttatagaaaaac
tgtcCCCCTTTTCCGCGAACAAAAACCGGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013350-exon-sc0000164-1491911889:468279..469209 | TCONS_00013350-exon-sc0000164-1491911889:468279..469209 | Clytia hemisphaerica | exon |
| TCONS_00013350-exon-sc0000164-1510915933:468279..469209 | TCONS_00013350-exon-sc0000164-1510915933:468279..469209 | Clytia hemisphaerica | exon |
| TCONS_00013350-exon-sc0000164-1575043694:468279..469209 | TCONS_00013350-exon-sc0000164-1575043694:468279..469209 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000164 | supercontig | sc0000164:468279..469209 . |
Blast
The following BLAST results are available for this feature:
|
