TCONS_00013387 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013387
Unique NameTCONS_00013387
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4927

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013387 ID=TCONS_00013387|Name=TCONS_00013387|organism=Clytia hemisphaerica|type=transcript|length=4927bp
ttttaaaggaaataaaCTTCAGACGTTgttaagaaaaataataaaattca
gatGAGGAAAAACGTAAGATAAATGGATAAAAATTAGCGCATAAACATAT
ATCGGTATTGTTTGGGACGACACAGAGGGTTATAAGCAAATTGATCGGAG
GTATTTTTTAAAAGACGTTTGCCATCACCACAAAAATGTTCAGCTTGATT
TTTAAGAAGACAACTGCTTCTGCTTCACTTTCAGAGTTTATGAGATCGAG
GCCGTTGCCTGGGATACCACCACCGACATCAACCAGCTCGGCGTCCACAC
CATCAGAGACTAGCAATGATTTCCCGCCATCGCCGGTGGCCGATAATTCT
TTCGATACAGCAACTGGTGTTGCTACGGACAACGGAGATGCAGAAATGTA
TTATGTTCAGTATGATTTTGATGCTGGAGATAATGAGAATCAATTATCCA
TCCATAAAGGAGAGCTCATTCGAGTCATTAGTTATGATGACACTAAAGTT
TGGTGTGAAGGACAAAATCGTAACGGCAAAATTGGTTGGCTCCCTTTTGC
ATATATAGTTGCTCACACAAGTTTTCATAAATTCGATTGGTATCATGGAC
GAATATCAAGGAACAGAGCTGAGTACCTTTTAAACAGTGGCATAAATGGC
AGTTTTTTGATgcgtgaaagtgaaagtgctccCGGACAACATTCTTTATC
GCTGCGATTTGACGGACGTGTTTATCATTATAGAGTGTATTTCGACGATA
ACGATTTCGCTTACGTACGTGAGGAGGCTAAATTTAAGACGCTAGTAGAA
TTAGTACAATTTCATACGGAACAAGCTGGTGGACTAGTCACTAATCTTCG
TTACGCTGCATTAAAAGTTGATAAGCCACCTGTCTATGGGTTTTCCCCTT
CTGAAGATGAATGGGAAATCCCTAGAATGGATATTTGGATGGGCCAAAAG
TTGGGTGGAGGGCAGTATGGAGATGTTTATAAAGCAGAGTACAAGAAATA
TGGTGCCACGGTAGCTGTGAAGACGCTCAAGGAAACACATACTGACGTGG
AAGAATTCCTTAAAGAAGCAGATATGATGAAGCAAATCAAACATGACAAT
CTGGTAAAACTTATCGGTGTTTGTACCAAAGAAACACCCATCTATATTGT
GACTGAGTACATGCCTCTTGGTAACCTGCTAGAATTTTTAAGACAAGCAG
ACAAGAGCGAGTTACCGGCCAAAACGTTATTGTATATGGCGTCACAGGTG
GCCTTAGCAATGAAGTATCTGGAATCGAGAAATTTCATTCATAGGGATTT
AGCGGCACGTAATTGTTTGGTGGGTGAAAACCACTTGATCAAAGTTGCAG
ACTTCGGGCTGGCCCGTTCCGTCGACCAAGATTACTATAAGGCCCATTCC
GGAGCCAAATTCCCGATCAAATGGACTAGCCCTGAAGCACTGGCTTACAA
TAAATTTTCAACCAAATCAGACGTTTGGGCGTTTGGTATTTTGATGTGGG
AGATTGCAACGTACGGCATGTCACCTTACCCTGGGCACGACTTGAATCAG
GTATATGGCTTCATAGAGAAAGGCTTACGAATGGAATGTCCCAGTGGCTG
TCCTGAACCCGCATATCAACTGATGCTTGATTGTTGGGAATGGAAAGCAG
AAAACCGGCCGACTTTTATTGATATTTGTACTCGACTCGAACATATGTTA
GATGTGCTTGATGAAgAAGTAAAGAAGGCGTTGAAATCACGCCCTCTTTC
CATGCATTCAAGCGATATTGAGGGGCTTGTTTTACCACCCAAACCGCCCA
AACGAAAGGGTGACAAAAAGGAAAAGGACGATGAGAAACTCAACAATAAC
ACTGAGCAAAAAccgaagaaagaaaagaaagaaaaattcaattttaaaaa
cactcTACGCAAAGATAAAAAGAATAAAGATACGTCACCCTCTCATCAAC
CCGTAACGCCCAACGACAGGCGAGGCTCAGCCTCCAGTGGCTCTTCTACT
ATCTCAGAACAAAGCTACCCACCACCCGTACCGACATCGAGTGCTCCTCC
TCCTCCTGTACCCAATTCTCAAGGAAGTAAATCTGTCTCAATGAATGAGC
TGCAAGATAGTTTGAAACTGTTGGCCAAACGGAACCCACAAGTAGCTTCA
TTGAACGAATCTCTTGCTTCCAGACTGGAAGAGCAACGACGTAGCTCAGT
ATCTACACCATCCAATAGGCCACCGCCTCCTCCGAGACCAGCCGAAGATA
ATCCTCCATCGAGCACCTTACCACGCCCAAAGAAGCCACCATTGCCACCC
AATCGTCCTCTGACGTCGAGAACCCTACCACAGGGTAGTGATCCCAACAT
CCCTGCAACACTATCTCACAGTCCACCTCGTCATCCTGCGCCGCCACCCC
CTGGTTTCCAAACGTCGAGGACATTACCACCTGGAAGTTCAAGCCCGATC
GCCAACCATACCCCACTGCAAGCGCCTCCCTCGCCACCTACTGTCAGCAA
TAGACCATTACCGCCACCTTCTGCTAACAAACCCTCACTACACACTCCCT
TGCAACCACCACCACCTCCTCCGTCGCAATACAACAAACCTGAGCCTCCT
TCAGAACCAGTTGAAGAGAAACCAAAAGTAGTGCCACCACGCCCTATTCC
AGCTGCTCGCCCTTCTGTCAAACCTCGCCCTGGTAAGCCACGCCCTGATA
GCTTACCACCAAAGCCAGGAACACCAGCTAAACCAGCTGCCCATGTAAGC
AATAGTAAACAGAGTTGTATAACAGTTGACCGTTCTAAGGTCAAGGAACA
GTTGCACCCAGTAGCAGACACATTGGAAACATTGGATAGTGTACTTAAGA
ACTTGATTCACTTAGCTAACCAAAGACTTTCTGAAAATATCGGTGAAAAA
TCAAACGATTGCTTGAGTTGCTGTAACGAGTTGGTCGATCGTATTTCATC
ATATCGAGATTCAATCGGGCCTGTTGCTCGAATGAAAGTTAACAAACATT
TAACGGGTATCGAATCGAGTGTCAACGATTTTACGAGTTTATCGAAGAAT
TTACCTCGCATACCTACTGCGACAGACTTAGAAAAGATGAGCAAGACTTT
GAAATTACTTTGTTCCGGGCTAGATAATTTATCACAGGCTTTGCCGTCTC
TATAGAAAGAGTTATTTCTTCAAtatattgaaattattttattaaccAAA
AAATTGAGATTCATTTTTTATAATGTTATCTATATACTAGCTGTTATtat
ttttagtcttttttttttacaatttttcacttgcaatgttttaattttcc
tCGCGTATTTCATTTTTACGTTCTGTTTTTAATCAGTTTTGATGTATATT
TTACTATTGATTCAATCTTCGATTTATGTTCGAATGTTTCGAATATCACG
AGCCTATAAGTCCTTCTAACTTTTTACTCAACGAATGTACCCTTCCAGAC
GTTACTAATcgattatcgattaaaatcgatagctaatcgataattattcg
attgattaaatatcgattaaaaacgataatcgatagctaatcgatacGCT
CAATTTTTCAGGACTCAATTAAATTATCACCATAGATTCTTAATCGATAA
TATCGATTACAGTGTTAATAATTGATAATATCAATTAATATCGGTATAAT
CGATACCTCGACCCTATCGATTTTAATAGATAATTTCGATGAAACTTGGT
TTAATATCTTACATCagatcgatataatcgatactCGATATTTTTTAGGC
tccgattatttatcgattatcgtttttaatcgatatttaATGAATCGATT
AATTATCGATTAGCTATCAATTTTAATCGATAATCGATTTTATTGATTAG
TAACCTCTGGACCCTTtgaataaaaatgataattgaAAGCTGTGGTTGCT
TCTTAAACAACAATTTTTTGACATGCGCTGAATTTCAATCTGCAATTTCA
AGATCAAAATGCTAAATAGGGTAGAAAACGGCTCACTACAATCAGCACCG
AAATATaatggcaattttgggtattttaaagtttttcagaatttaaaggt
cgAAGCCAGAATTGCCGTTTCAGTTTTCCACTTTGCTTCATCGGATTTTT
CGATTTAGGAGGGGTtgagtggcttccaggctatattctctgccttattg
gaacatttttgagctttatGATCTGtgatcctaaggtcgtaagtcttaag
tctaatgttataactcagagttaaaactctacttccgaGCTATACTTCAA
AATACTTAAAAgtcacttgcggttttaaagttttgagggaattcccatgt
caaatatttcggcgccgagAATAGTACCTCCAATCTGCttaaaaaatgag
aacagcTAACAGTAGAGTTTAGAAAGAAACTAACAATCTTTTGTAAAATG
TGTTTCTCGGAAACAGGGACAAGGGGTTATTTCCTTCATTTAATTATTCT
TTAATATTTTGTCATAAAATGAAGAGCTGcattttttacctgaaaattAT
AATATGTCActaattattttattaaaatacttttaactttttttgttcaT
AATTTTTCTACCCAATAATTGTAGCATTTTCCTgtattttttcataatta
tcagTGAAGTTTCTAATAACTTCTAACTAGCTCTCAAGAAAATTGCAGTT
GGAATGTTCTATTTGATTTAATATTGATAATGAATGGAATCAAAGGCTAA
TAAATTGACGACTCTAAAATATAGTGTTCCACAACTTGGAAAACCACACA
GAATTTCGGACAAACCTTCCTTAGCATCTTTCACTGATAAGAAAGTTAac
tttattgttattattatttgtcGATTAGATAATTTTAGAATCGAGAAata
ttattttgtaaaatagaagaattttttttttggtttttcttagaGATATC
TTGAATAATACGTTATTGTAAGGACCA
Run BLAST on NCBI

transcript from alignment at sc0000167:291182..299024+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013387 ID=TCONS_00013387|Name=TCONS_00013387|organism=Clytia hemisphaerica|type=transcript|length=7843bp|location=Sequence derived from alignment at sc0000167:291182..299024+ (Clytia hemisphaerica)
ttttaaaggaaataaaCTTCAGACGTTgttaagaaaaataataaaattca
gatGAGGAAAAACGTAAGATAAATGGATAAAAATTAGCGCATAAACATAT
ATCGGTATTGTTTGGGACGACACAGAGGGTTATAAGCAAATTGATCGGAG
GTATTTTTTAAAAGACGTTTGCCATCACCACAAAAATGTTCAGCTTGATT
TTTAAGAAGACAACTGCTTCTGCTTCACTTTCAGAGTTTATGAGATCGAG
GCCGTTGCCTGGGATACCACCACCGACATCAACCAGCTCGGCGTCCACAC
CATCAGAGACTAGCAATGATTTCCCGCCATCGCCGGTGGCCGATAATTCT
TTCGATACAGCAACTGGTGTTGCTACGGACAACGGAGATGCAGAAATGTA
TTATGTTCAGTATGATTTTGATGCTGGAGATAATGAGAATCAATTATCCA
TCCATAAAGGAGAGCTCATTCGAGTCATTAGTTATGATGACACTAAAGTT
TGGTGTGAAGGACAAAATCGTAACGGCAAAATTGGTTGGCTCCCTTTTGC
ATATATAGTTGCTCACACAAGTTTTCATAAATTCGATTGGTATCATGGAC
GAATATCAAGGAACAGAGCTGAGTACCTTTTAAACAGTGGCATAAATGGC
AGTTTTTTGATgcgtgaaagtgaaagtgctccCGGACAACATTCTTTATC
GCTGCGATTTGACGGACGTGTTTATCATTATAGAGTGTATTTCGACGATA
ACGATTTCGCTTACGTACGTGAGGAGGCTAAATTTAAGACGCTAGTAGAA
TTAGTACAATTTCATACGGAACAAGCTGGTGGACTAGTCACTAATCTTCG
TTACGCTGCATTAAAAGTTGATAAGCCACCTGTCTATGGGTTTTCCCCTT
CTGAAGATGAATGGGAAATCCCTAGAATGGATATTTGGATGGGCCAAAAG
TTGGGTGGAGGGCAGTATGGAGATGTTTATAAAGCAGAGTACAAGAAATA
TGGTGCCACGGTAGCTGTGAAGACGCTCAAGGTAAGAGATACGGTATCCT
ACTTCATTGTTTTGTCACATGAAGCGATCCTCCCACTACACTTAAAGTAA
TGTTTTAAATTAGTTTTCTACAAATTTGATCCCGCTTGACGAAAGACATC
ACGCTATGTAACATTTTATTCTTAAGTAAGAAGATCCGAAGGATTCGTCC
TTTATTTCGATATCAGTATAATTGGTCGAAAGTATCATTTCAGCCGGAGG
TTTAGCTTGGACCGGCGATCTGCAAAAGACGAAAATCAGGATTTTTTAAT
GCCTCGCAAGCATtctaataataatataataataacataaaatgttttaa
gtggcatgctccgaaaaattcaaaagtttttaggcagctggagaattgtt
tccacgaagggccactCTGTTCTAAGAgtgatcttttttttcttcaaaat
gcacGAGTTGTAATGCCTGCCTCGCAAGTTGACctctttttatttcaata
tcGAGCTCTCTGTTCATATCAATGCACTGCATTTCAACCCTATTTTAACA
TAACATTGAgaaatcaaaagtaaatcaaaagtCTATTTTTGAACGCtgtt
ttaatttctttgatCTTCTAACTTCCGTATTTTAAGAGTTtgttaagagt
tgtcattttaaaagaattttatagGATTTGTGGTgactttttgtcatttt
atcaggAGTGAGGGGGTTGGAGATAacatatgacgtcataaattgaTATT
ATGTCATAAAACTCACTTGTTTACTAATGACTCTTTGTAGCAAACTAACA
AAAGACAATCGGAGTTTTGTATATCTTATGTCTACGAATTATGAAGTGcc
ttagatttttaaattgccCATAATGAAGGCCTTGTTAAGATGCTTACGTT
GTATCGTGTTTTAATAAGATATTTATGGTTTGTACTTTCGATGAATTTCC
GAATGATGTAATAATTAAAAATCATCAAGCTATGACGACAACTTTTTTTG
ACAAATGATTCTCTTTCTCTTACTCTTTCTCATACATAATTTTAATAAGT
TTATTTCATGTTGATTACATTCCCCTACGCGCTTTATAAGGCTTGATACC
AAAATGATAGTAATACCTTGTAATACCATTGAAAAGAACCAACCGAACAT
CAATGTCATTAAGATACAATCTCTCAGTTATGGAAACCATGTACATTACA
ATGattattctttttataagcagttatagtattttttcaatagcTATATC
TTCTGAGAAAGCTAAGAATATAGAAGGTAATCCCCTTGCTTTAGATGGCC
GATATTTTTACAGTCATACCTCTGTTCGATGGAAGAATTGTCGGTAactc
aatttttatcaaaaccattcgttctttttataaaattaatgtttttttgt
gttAACTTTTAAGAGTTTACAGGAACTGCTAATAAAAAAGCTATCTTGGC
TAGCTTTTGCCTAAAACGTGCATGCTTTTAGACCTTTCTAGAGACTTTCG
AGAATATCGAGCTTCAAATTCTTCAAACTCCAgtcactttttctttctta
gtgACCTCTTGAGATTATATTTTCTGTATTCTAGGAAACACATACTGACG
TGGAAGAATTCCTTAAAGAAGCAGATATGATGAAGCAAATCAAACATGAC
AATCTGGTAAAACTTATCGGTGTTTGTACCAAAGAAACACCCATCTATAT
TGTGACTGAGTACATGCCTCTTGGTAACCTGCTAGAATTTTTAAGACAAG
CAGACAAGAGCGAGTTACCGGCCAAAACGTTATTGTATATGGCGTCACAG
GTGGCCTTAGCAATGAAGTATCTGGAATCGAGAAATTTCATTCATAGGTA
TGATGGCTCACTTTTTGTTTCGATACTGTTTTCTCTTCCCTTTCCTGGTC
TACTGGCCTGGCCTACTTTGGATCAATACTGAAAAAGATGTTTTGAGTAA
CTTGATTTCGTAGAAACTGCTTATGTAATAGGGTTGTTTATTTAGATGAA
GTGACTTGGACCCCCTTCGatccttcaattcacgcaatcgtgcaaaattt
tttttcccgcaaagttttccaattcacgcactcacacagtttttttaaat
ttaagaaTCTTCTTATTTTTTGCCACCGTAGGGATTTAGCGGCACGTAAT
TGTTTGGTGGGTGAAAACCACTTGATCAAAGTTGCAGACTTCGGGCTGGC
CCGTTCCGTCGACCAAGATTACTATAAGGCCCATTCCGGAGCCAAATTCC
CGATCAAATGGACTAGCCCTGAAGCACTGGCTTACAATAAATTTTCAACC
AAATCAGACGTTTGGGGTAATTTTCTTgtaattttattgctttttcctct
ttttgctTAGCTTTTCTTAATGTTTGCTAACGATCTCATTCTTGAGTGAA
TGATGAGGGTTAATTTGAGTAGATCATTACACGGGTAGAAAACTCTCTTT
TCAGTCCCAATTGTAATAATGGTAGACACTCGCAAATTTGATCTTCTACG
TCGATCTTCTATATTAATTCGAACCCATTTTCTGTTCCTGTTAAAGGAAA
ATCCTTGTAGAATACTCTTCATAATtagaatctttctgtaattcaaacaA
ATTAGATTTTGAATTAACAAAGTCTAACTTTACATATGACTAAAACGTTT
CTTTTTTCGATTCACGTGAACAGCGTTTGGTATTTTGATGTGGGAGATTG
CAACGTACGGCATGTCACCTTACCCTGGGCACGACTTGAATCAGGTATAT
GGCTTCATAGAGAAAGGCTTACGAATGGAATGTCCCAGTGGCTGTCCTGA
ACCCGCATATCAACTGATGCTTGATTGtatgtataattttattttgttta
gcTGAACTGCCAAATTGGGGTAaggtttcaaatgtttttaaaaattactg
TAGATTTGGATTAGTTTTTGGGAGAGAAGGCGCGCGATAAGTGCTAAGTG
TCAAAGAAGTAGTAACTTAACTTATAGTGGCGTTGAAAACTTTGTTAAAC
ATTGCGTTCCCCTCTGGCTTACCTTATCTTGGGGATCGTCAAATAACTCA
ACTAGGCAATGTCTTTTCACGATCTATTAGAAGTTTCCACACAACAACTT
TGAATTCATCCTTTTTAGTAGTGGTAGATTAAACTCTTAAACTATAACTT
ATTGGTTTAAATGTAATCGATTTTAGGATAATTGATTTGAATTTCTTTGC
AGGTTGGGAATGGAAAGCAGAAAACCGGCCGACTTTTATTGATATTTGTA
CTCGACTCGAACATATGTTAGATGTGCTTGATGAAggtttgaaattcttt
tgttatCGGTCAAAAGAAATACTGCTGTTTCTGCGTGTTGTCTGATTAAA
ATGAAGGTGTCACTCTGCCTCTAACTTGTATCTTCGATATTTTGacttgt
ttttcttcttatctTATGCTGAATTTGtttaattatcaaaatttcataCT
TTCTCATATTTGGACGAACCGATATTTCCTTCTTATTTCTTTCTACATTT
ACATGAAAATCATAATGATCTTCTTTTAAATTGTTCACTTTTCACAAAAT
ATAGAAGTAAAGAAGGCGTTGAAATCACGCCCTCTTTCCATGCATTCAAG
CGATATTGAGGGGCTTGTTTTACCACCCAAACCGCCCAAACGAAAGGGTG
ACAAAAAGGAAAAGGACGATGAGAAACTCAACAATAACACTGAGCAAAAA
ccgaagaaagaaaagaaagaaaaattcaattttaaaaacactcTACGCAA
AGATAAAAAGAATAAAGATACGTCACCCTCTCATCAACCCGTAACGCCCA
ACGACAGGCGAGGCTCAGCCTCCNGCAAAGATAAGAAGAATAAAGATACG
TCACCCTCTCATCAACCCGTAACGCCCAACGACAGGCGAGGCTCAGCCTC
CAGTGGCTCTTCTACTATCTCAGAACAAAGCTACCCACCACCCGTACCGA
CATCGAGTGCTCCTCCTCCTCCTGTACCCAATTCTCAAGGAAGTAAATCT
GTCTCAATGAATGAGCTGCAAGATAGTTTGAAACTGTTGGCCAAACGGAA
CCCACAAGTAGCTTCATTGAACGAATCTCTTGCTTCCAGACTGGAAGAGC
AACGACGTAGCTCAGTATCTACACCATCCAATAGGCCACCGCCTCCTCCG
AGACCAGCCGAAGATAATCCTCCATCGAGCACCTTACCACGCCCAAAGAA
GCCACCATTGCCACCCAATCGTCCTCTGACGTCGAGAACCCTACCACAGG
GTAGTGATCCCAACATCCCTGCAACACTATCTCACAGTCCACCTCGTCAT
CCTGCGCCGCCACCCCCTGGTTTCCAAACGTCGAGGACATTACCACCTGG
AAGTTCAAGCCCGATCGCCAACCATACCCCACTGCAAGCGCCTCCCTCGC
CACCTACTGTCAGCAATAGACCATTACCGCCACCTTCTGCTAACAAACCC
TCACTACACACTCCCTTGCAACCACCACCACCTCCTCCGTCGCAATACAA
CAAACCTGAGCCTCCTTCAGAACCAGTTGAAGAGAAACCAAAAGTAGTGC
CACCACGCCCTATTCCAGCTGCTCGCCCTTCTGTCAAACCTCGCCCTGGT
AAGCCACGCCCTGATAGCTTACCACCAAAGCCAGGAACACCAGCTAAACC
AGCTGCCCATGTAAGCAATAGTAAACAGAGTTGTATAACAGTTGACCGTT
CTAAGGTCAAGGAACAGTTGCACCCAGTAGCAGACACATTGGAAACATTG
GATAGTGTACTTAAGAACTTGATTCACTTAGCTAACCAAAGACTTTCTGA
AAATATCGGTGAAAAATCAAACGATTGCTTGAGTTGCTGTAACGAGTTGG
TCGATCGTATTTCATCATATCGAGATTCAATCGGGCCTGTTGCTCGAATG
AAAGTTAACAAACATTTAACGGGTATCGAATCGAGTGTCAACGATTTTAC
GAGTTTATCGAAGAATTTACCTCGCATACCTACTGCGACAGACTTAGAAA
AGATGAGCAAGACTTTGAAATTACTTTGTTCCGGGCTAGATAATTTATCA
CAGGCTTTGCCGTCTCTATAGAAAGAGTTATTTCTTCAAtatattgaaat
tattttattaaccAAAAAATTGAGATTCATTTTTTATAATGTTATCTATA
TACTAGCTGTTATtatttttagtcttttttttttacaatttttcacttgc
aatgttttaattttcctCGCGTATTTCATTTTTACGTTCTGTTTTTAATC
AGTTTTGATGTATATTTTACTATTGATTCAATCTTCGATTTATGTTCGAA
TGTTTCGAATATCACGAGCCTATAAGTCCTTCTAACTTTTTACTCAACGA
ATGTACCCTTCCAGACGTTACTAATcgattatcgattaaaatcgatagct
aatcgataattattcgattgattaaatatcgattaaaaacgataatcgat
agctaatcgatacGCTCAATTTTTCAGGACTCAATTAAATTATCACCATA
GATTCTTAATCGATAATATCGATTACAGTGTTAATAATTGATAATATCAA
TTAATATCGGTATAATCGATACCTCGACCCTATCGATTTTAATAGATAAT
TTCGATGAAACTTGGTTTAATATCTTACATCagatcgatataatcgatac
tCGATATTTTTTAGGCtccgattatttatcgattatcgtttttaatcgat
atttaATGAATCGATTAATTATCGATTAGCTATCAATTTTAATCGATAAT
CGATTTTATTGATTAGTAACCTCTGGACCCTTtgaataaaaatgataatt
gaAAGCTGTGGTTGCTTCTTAAACAACAATTTTTTGACATGCGCTGAATT
TCAATCTGCAATTTCAAGATCAAAATGCTAAATAGGGTAGAAAACGGCTC
ACTACAATCAGCACCGAAATATaatggcaattttgggtattttaaagttt
ttcagaatttaaaggtcgAAGCCAGAATTGCCGTTTCAGTTTTCCACTTT
GCTTCATCGGATTTTTCGATTTAGGAGGGGTtgagtggcttccaggctat
attctctgccttattggaacatttttgagctttatGATCTGtgatcctaa
ggtcgtaagtcttaagtctaatgttataactcagagttaaaactctactt
ccgaGCTATACTTCAAAATACTTAAAAgtcacttgcggttttaaagtttt
gagggaattcccatgtcaaatatttcggcgccgagAATAGTACCTCCAAT
CTGCttaaaaaatgagaacagcTAACAGTAGAGTTTAGAAAGAAACTAAC
AATCTTTTGTAAAATGTGTTTCTCGGAAACAGGGACAAGGGGTTATTTCC
TTCATTTAATTATTCTTTAATATTTTGTCATAAAATGAAGAGCTGcattt
tttacctgaaaattATAATATGTCActaattattttattaaaatactttt
aactttttttgttcaTAATTTTTCTACCCAATAATTGTAGCATTTTCCTg
tattttttcataattatcagTGAAGTTTCTAATAACTTCTAACTAGCTCT
CAAGAAAATTGCAGTTGGAATGTTCTATTTGATTTAATATTGATAATGAA
TGGAATCAAAGGCTAATAAATTGACGACTCTAAAATATAGTGTTCCACAA
CTTGGAAAACCACACAGAATTTCGGACAAACCTTCCTTAGCATCTTTCAC
TGATAAGAAAGTTAactttattgttattattatttgtcGATTAGATAATT
TTAGAATCGAGAAatattattttgtaaaatagaagaattttttttttggt
ttttcttagaGATATCTTGAATAATACGTTATTGTAAGGACCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007480XLOC_007480Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013387-exon-sc0000167-1491911889:291182..292212TCONS_00013387-exon-sc0000167-1491911889:291182..292212Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1510915933:291182..292212TCONS_00013387-exon-sc0000167-1510915933:291182..292212Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1575043694:291182..292212TCONS_00013387-exon-sc0000167-1575043694:291182..292212Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1491911889:293766..294028TCONS_00013387-exon-sc0000167-1491911889:293766..294028Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1510915933:293766..294028TCONS_00013387-exon-sc0000167-1510915933:293766..294028Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1575043694:293766..294028TCONS_00013387-exon-sc0000167-1575043694:293766..294028Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1491911889:294313..294497TCONS_00013387-exon-sc0000167-1491911889:294313..294497Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1510915933:294313..294497TCONS_00013387-exon-sc0000167-1510915933:294313..294497Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1575043694:294313..294497TCONS_00013387-exon-sc0000167-1575043694:294313..294497Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1491911889:294855..295007TCONS_00013387-exon-sc0000167-1491911889:294855..295007Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1510915933:294855..295007TCONS_00013387-exon-sc0000167-1510915933:294855..295007Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1575043694:294855..295007TCONS_00013387-exon-sc0000167-1575043694:294855..295007Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1491911889:295384..295467TCONS_00013387-exon-sc0000167-1491911889:295384..295467Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1510915933:295384..295467TCONS_00013387-exon-sc0000167-1510915933:295384..295467Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1575043694:295384..295467TCONS_00013387-exon-sc0000167-1575043694:295384..295467Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1491911889:295736..295988TCONS_00013387-exon-sc0000167-1491911889:295736..295988Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1510915933:295736..295988TCONS_00013387-exon-sc0000167-1510915933:295736..295988Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1575043694:295736..295988TCONS_00013387-exon-sc0000167-1575043694:295736..295988Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1491911889:296067..299024TCONS_00013387-exon-sc0000167-1491911889:296067..299024Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1510915933:296067..299024TCONS_00013387-exon-sc0000167-1510915933:296067..299024Clytia hemisphaericaexon
TCONS_00013387-exon-sc0000167-1575043694:296067..299024TCONS_00013387-exon-sc0000167-1575043694:296067..299024Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000167supercontigsc0000167:291182..299024 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.238014	0	0	0.926947	0.922802	1.70755	6.3095e-09	0.313985	0.226548	0.218007	0	0.465075	0.646396	1.26724	0.201004	0.98048	4.45508	3.46839	2.35582	2.18964	5.01266	5.04959	2.94835	2.38655	1.45786	2.34497	23.1897	24.3235	14.2846	15.3723
Blast
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BLAST of TCONS_00013387 vs. Swiss-Prot (Human)
Match: ABL1 (Tyrosine-protein kinase ABL1 OS=Homo sapiens GN=ABL1 PE=1 SV=4)

HSP 1 Score: 577.4 bits (1487), Expect = 0.000e+0
Identity = 276/479 (57.62%), Postives = 349/479 (72.86%), Query Frame = 3 
Query:  315 NDFPPSPVAD----NSFDTATGVATDNGDAEMYYVQYDFDAGDNENQLSIHKGELIRVISYDDTKVWCEGQNRNGKIGWLPFAYIVAHTSFHKFDWYHGRISRNRAEYLLNSGINGSFLMRESESAPGQHSLSLRFDGRVYHYRVYFDDNDFAYVREEAKFKTLVELVQFHTEQAGGLVTNLRYAALKVDKPPVYGFSPSEDEWEIPRMDIWMGQKLGGGQYGDVYKAEYKKYGATVAVKTLKETHTDVEEFLKEADMMKQIKHDNLVKLIGVCTKETPIYIVTEYMPLGNLLEFLRQADKSELPAKTLLYMASQVALAMKYLESRNFIHRDLAARNCLVGENHLIKVADFGLARSVDQDYYKAHSGAKFPIKWTSPEALAYNKFSTKSDVWAFGILMWEIATYGMSPYPGHDLNQVYGFIEKGLRMECPSGCPEPAYQLMLDCWEWKAENRPTFIDICTRLEHML--DVLDEEVKKAL 1733
            +DF P  +++    NS +      ++N D  ++   YDF A   +N LSI KGE +RV+ Y+    WCE Q +NG+ GW+P  YI    S  K  WYHG +SRN AEYLL+SGINGSFL+RESES+PGQ S+SLR++GRVYHYR+    +   YV  E++F TL ELV  H+  A GL+T L Y A K +KP VYG SP+ D+WE+ R DI M  KLGGGQYG+VY+  +KKY  TVAVKTLKE   +VEEFLKEA +MK+IKH NLV+L+GVCT+E P YI+TE+M  GNLL++LR+ ++ E+ A  LLYMA+Q++ AM+YLE +NFIHRDLAARNCLVGENHL+KVADFGL+R +  D Y AH+GAKFPIKWT+PE+LAYNKFS KSDVWAFG+L+WEIATYGMSPYPG DL+QVY  +EK  RME P GCPE  Y+LM  CW+W   +RP+F +I    E M     + +EV+K L
Sbjct:   35 SDFEPQGLSEAARWNSKENLLAGPSEN-DPNLFVALYDFVA-SGDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQ-GWVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHSTVADGLITTLHYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 510
The following BLAST results are available for this feature:
BLAST of TCONS_00013387 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABL10.000e+057.62Tyrosine-protein kinase ABL1 OS=Homo sapiens GN=AB... [more]
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