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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013402 ID=TCONS_00013402|Name=TCONS_00013402|organism=Clytia hemisphaerica|type=transcript|length=1811bp
TGATAGCTGACGATTCGATAAAGATGAAATTTGAAGtactataattcaaa
ttttgattttttcttgtaTACTGTATGAAGCTCTGGTCCTGGTCATCGAG
CACTCTTTAATGGAATCATCTATTACTTATTGATATTGATTAATCAAAAG
ACACTTTTGCACTTTAAGCTTACAAGATACCTTCCTTTATCTCATTGCAG
GACGAAACTGAGCACAACATGGTTGCAGTTGATTTTAGCTACAAAGACTG
gctcaaaaaacgaaaaataactACCAGAGTTTTTGTTGCCGTTCAATTTG
CGATAGGTATTGAATATTCGATGACTTTTACAACATTGTACGTGTACTTA
AAGGACGTTTTACACATCACAAACAACCTTAATGCTTTTTATAGCAGTAT
TTGTGGAATATACGTTTTGACACAGATTGTTGCATCGTTGGTTTTATGCC
GCTTGTTTGATAAATGTCGAACATTAAAACTTTTCTTTACTCTCGTTACG
TTTATAACATTTGTTGGAAATGTTTTGTACACAATCCCATTCTCACCGTA
TCTCTTGTTAGCCGGACGTTTCCTTTCCGGAGCTGGAGGCTCCCTGAGAC
CGATTATGTTATCTGAATTGACCAGGTCATATCCTAGTGATGAAGTTATG
GCACAAATGTCGACGATGAGTGTTAGCTATGGTATTGGTTTCACACTTGG
TCCGgcaattaattttgcttttgTGAAAGCACGATTTACACTACTTGGTA
TACCGATCGGGTATGCTAATGGAGCTGGATTAGCGTTATCAATCGCATTC
CTAGTAGCTTTTGCTATGTCTCTCTTTTTTGTAAGTGAtctatcaaaaga
atttgactTAAAAGAGGAAATACAAAAGATGGATGCTGACAAACAATCAG
TAGATAGTTTATGTGGAAGTGAAGAAGATCCATCTGAAATATTCTCTGAT
TTTGATAACGAACCTCTGTTGGGTAAAGATTCTTCCGAGAATAGAACAGA
AGTGAACCAATTAGGAATAATAGAGACTCTTATGAAGTTGTTCTCTTCAA
TAgacattgttcttatttttgttcTCTCGTTTTTCGCCTTCATCACAATG
CTAATGCAAGATCTATGGATACCTATGGCAGTTATAAAACTATTGCATTG
GACAGCCTTGGAAATCAATCTCATTTTCCTGTTCAATGGTACCATTATCA
GTTTAATGTGTTTGTTCTTGGTATTCAAACCGCCATCGAAGAATCAGTTG
GTCAATCTTGGGATTTTGAGTTTTGTAACTACATGCTACCCGTTTGgatg
ttttttatatttccGTTTGGTTAACAGCATGGAATGGATCAATGTGGCAT
TATGGGTTACTTATCCTTTTATGATGTCTCCTATTGCCATCGTTGATGAG
ATATTCATGATGAGTGTTTTGGCCAAAATGGTTCCATCTAAGATTCAATC
ATTTTCTGAAAGCGTTCGTTTGATGTGCTCCAGATTTGGAGCAACTCTTG
GTTTGTTTACTGCAGCCTTCGCCTTTGAACATATCCTATATGTTTGTCCA
CTATTCATGGCTATATCTTTGGTATTGATGCTTTTCTTGATTTGGAGAAA
GGAACACTTTCAAAATCCGAGAATGGTGATttaataaaagtaaaatattt
acaGGAAAGTagaagaaaaatataatttaatgataaaaatttttttgtaa
cgAACTTAATAAAGTCTATTTCATTGAAAAGCTGAAATCTCGTAACTTGA
ATTAATAAAGAAAGAACACGGAGATAACAGTGCTTCCTTTTTAGATCTTA
ATATTACAATT Run BLAST on NCBI protein sequence of Major Facilitator Superfamily domain containing protein >TCONS_00013402-protein ID=TCONS_00013402-protein|Name=Major Facilitator Superfamily domain containing protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
MVAVDFSYKDWLKKRKITTRVFVAVQFAIGIEYSMTFTTLYVYLKDVLHI
TNNLNAFYSSICGIYVLTQIVASLVLCRLFDKCRTLKLFFTLVTFITFVG
NVLYTIPFSPYLLLAGRFLSGAGGSLRPIMLSELTRSYPSDEVMAQMSTM
SVSYGIGFTLGPAINFAFVKARFTLLGIPIGYANGAGLALSIAFLVAFAM
SLFFVSDLSKEFDLKEEIQKMDADKQSVDSLCGSEEDPSEIFSDFDNEPL
LGKDSSENRTEVNQLGIIETLMKLFSSIDIVLIFVLSFFAFITMLMQDLW
IPMAVIKLLHWTALEINLIFLFNGTIISLMCLFLVFKPPSKNQLVNLGIL
SFVTTCYPFGCFLYFRLVNSMEWINVALWVTYPFMMSPIAIVDEIFMMSV
LAKMVPSKIQSFSESVRLMCSRFGATLGLFTAAFAFEHILYVCPLFMAIS
LVLMLFLIWRKEHFQNPRMVI Run BLAST on NCBI transcript from alignment at sc0000167:24130..26545- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013402 ID=TCONS_00013402|Name=TCONS_00013402|organism=Clytia hemisphaerica|type=transcript|length=2416bp|location=Sequence derived from alignment at sc0000167:24130..26545- (Clytia hemisphaerica)
TGATAGCTGACGATTCGATAAAGATGAAATTTGAAGTACTATAATTCAAA
TTTTGATTTTTTCTTGTATACTGTATGAAGCTCTGGTCCTGGTCATCGAG
CACTCTTTAATGGAATCATCTATTACTTATTGATATTGATTAATCAAAAG
ACACTTTTGCACTTTAAGCTTACAAGATACCTTCCTTTATCTCATTGCAG
GACGAAACTGAGCACAACATGGTTGCAGTTGATTTTAGCTACAAAGACTG
GCTCAAAAAACGAAAAATAACTACCAGAGTTTTTGTTGCCGTTCAATTTG
CGATAGGTATTGAATATTCGATGACTTTTACAACATTGTACGTGTACTTA
AAGGACGTTTTACACATCACAAACAACCTTAATGCTTTTTATAGCAGTAT
TTGTGGAATATACGTTTTGACACAGATTGTTGCATCGTTGGTTTTATGCC
GCTTGTTTGATAAATGTCGAACATTAAAACTTTTCTTTACTCTCGTTACG
TTTATAACATTTGTTGGAAATGTTTTGTACACAATCCCATTCTCACCGTA
TCTCTTGTTAGCCGGACGTTTCCTTTCCGGAGCTGGAGGCTCCCTGAGAC
CGATTATGTTATCTGAATTGACCAGGTCATATCCTAGTGATGAAGTTATG
GCACAAATGTCGACGATGAGTGTTAGCTATGGTATTGGTTTCACACTTGG
TCCGGCAATTAATTTTGCTTTTGTGAAAGCACGATTTACACTACTTGGTA
TACCGATCGGGTATGCTAATGGAGCTGGATTAGCGTTATCAATCGCATTC
CTAGTAGCTTTTGCTATGTCTCTCTTTTTTGTAAGTGATCTATCAAAAGA
ATTTGACTTAAAAGAGGAAATACAAAAGATGGATGCTGACAAACAATCAG
TAGATAGTTTATGTGGAAGTGAAGAAGATCCATCTGAAATATTCTCTGAT
TTTGATAACGAACCTCTGTTGGGTAAAGATTCTTCCGAGAATAGAACAGA
AGTGAACCAATTAGGAATAATAGAGACTCTTATGAAGTTGTTCTCTTCAA
TAGACATTGTTCTTATTTTTGTTCTCTCGTTTTTCGCCTTCATCACAATG
CTAATGCAAGATCTATGGATACCTATGGCAGTTATAAAACTATTGCATTG
GACAGCCTTGGAAATCAATCTCATTTTCCTGTTCAATGGTACCATTATCA
GTTTAATGTGTTTGTTCTTGGTATTCAAACCGCCATCGAAGAATCAGTTG
GTCAATCTTGGGATTTTGAGTTTTGTAACTACATGCTACCCGTTTGGATG
TTTTTTGTACTTCCGTTTGGTGAACAGCATGGAATGGATAAATGTGGCAT
TATGGGTTACTTATCCTTTTATGATGTCTCCTATTGCAATCGTTGATGAG
ATATTCATGATGAGTGTTTTGGCCAAAATGGTTCCATCTAAGATTCAANA
AAAGAATTTGACTTAAAAGAGGAAATACAAAAGATGGATGCTAACAAACA
ATCAGTAGATAGTTTATGTGGTGCAAATGAAGAAGATCCATCTGAAATAT
TCTCTGATTTTGATAACGAACCTCTGTTGGGTAAAGATTCTTCCGAGAAT
AGAACAGAAGTCCAATTAGGAATAATAGAGACTATTATGAAGTTGTTCTC
TTCAATAGATATTGTTCTTATTTTTGTTCTCTCGTTTTTCGCCTTCATCA
CAATGCTAATGCAAGATCTATGGATACCCATGGCAGTTATAAAACTATTG
CATTGGACAGCCTTGGAAATCAATCTCATTTTTCTGTTCAATGGTACCAT
CATCAGTTTAATGTGTTTGTTCTTGGTATTCAAACCACCATCGAAGAATC
AGTTGGTCAATCTTGGGATTTTGAGTTTTGTAACCACATGCTACCCGTTT
GGATGTTTTTTATATTTCCGTTTGGTTAACAGCATGGAATGGATCAATGT
GGCATTATGGGTTACTTATCCTTTTATGATGTCTCCTATTGCCATCGTTG
ATGAGATATTCATGATGAGTGTTTTGGCCAAAATGGTTCCATCTAAGATT
CAATCATTTTCTGAAAGCGTTCGTTTGATGTGCTCCAGATTTGGAGCAAC
TCTTGGTTTGTTTACTGCAGCCTTCGCCTTTGAACATATCCTATATGTTT
GTCCACTATTCATGGCTATATCTTTGGTATTGATGCTTTTCTTGATTTGG
AGAAAGGAACACTTTCAAAATCCGAGAATGGTGATTTAATAAAAGTAAAA
TATTTACAGGAAAGTAGAAGAAAAATATAATTTAATGATAAAAATTTTTT
TGTAACGAACTTAATAAAGTCTATTTCATTGAAAAGCTGAAATCTCGTAA
CTTGAATTAATAAAGAAAGAACACGGAGATAACAGTGCTTCCTTTTTAGA
TCTTAATATTACAATT Coding sequence (CDS) from alignment at sc0000167:24130..26545- >TCONS_00013402 ID=TCONS_00013402|Name=TCONS_00013402|organism=Clytia hemisphaerica|type=CDS|length=2832bp|location=Sequence derived from alignment at sc0000167:24130..26545- (Clytia hemisphaerica)
ATGCTACCCGTTTGGATGTTTTTTATATTTCCGTTTGGTTAACAGCATGG
AATGGATCAATGTGGCATTATGGGTTACTTATCCTTTTATGATGTCTCCT
ATTGCCATCGTTGATGAGATATTCATGATGAGTGTTTTGGCCAAAATGGT
TCCATCTAAGATTCAATCATTTTCTGAAAGCGTTCGTTTGATGTGCTCCA
GATTTGGAGCAACTCTTGGTTTGTTTACTGCAGCCTTCGCCTTTGAACAT
ATCCTATATGTTTGTCCACTATTCATGGCTATATCTTTGGTATTGATGCT
TTTCTTGATTTGGAGAAAGGAACACTTTCAAAATCCGAGAATGGTGATTT
AAATGGTTGCAGTTGATTTTAGCTACAAAGACTGGCTCAAAAAACGAAAA
ATAACTACCAGAGTTTTTGTTGCCGTTCAATTTGCGATAGGTATTGAATA
TTCGATGACTTTTACAACATTGTACGTGTACTTAAAGGACGTTTTACACA
TCACAAACAACCTTAATGCTTTTTATAGCAGTATTTGTGGAATATACGTT
TTGACACAGATTGTTGCATCGTTGGTTTTATGCCGCTTGTTTGATAAATG
TCGAACATTAAAACTTTTCTTTACTCTCGTTACGTTTATAACATTTGTTG
GAAATGTTTTGTACACAATCCCATTCTCACCGTATCTCTTGTTAGCCGGA
CGTTTCCTTTCCGGAGCTGGAGGCTCCCTGAGACCGATTATGTTATCTGA
ATTGACCAGGTCATATCCTAGTGATGAAGTTATGGCACAAATGTCGACGA
TGAGTGTTAGCTATGGTATTGGTTTCACACTTGGTCCGGCAATTAATTTT
GCTTTTGTGAAAGCACGATTTACACTACTTGGTATACCGATCGGGTATGC
TAATGGAGCTGGATTAGCGTTATCAATCGCATTCCTAGTAGCTTTTGCTA
TGTCTCTCTTTTTTGTAAGTGATCTATCAAAAGAATTTGACTTAAAAGAG
GAAATACAAAAGATGGATGCTGACAAACAATCAGTAGATAGTTTATGTGG
AAGTGAAGAAGATCCATCTGAAATATTCTCTGATTTTGATAACGAACCTC
TGTTGGGTAAAGATTCTTCCGAGAATAGAACAGAAGTGAACCAATTAGGA
ATAATAGAGACTCTTATGAAGTTGTTCTCTTCAATAGACATTGTTCTTAT
TTTTGTTCTCTCGTTTTTCGCCTTCATCACAATGCTAATGCAAGATCTAT
GGATACCTATGGCAGTTATAAAACTATTGCATTGGACAGCCTTGGAAATC
AATCTCATTTTCCTGTTCAATGGTACCATTATCAGTTTAATGTGTTTGTT
CTTGGTATTCAAACCGCCATCGAAGAATCAGTTGGTCAATCTTGGGATTT
TGAGTTTTGTAACTACATGCTACCCGTTTGGATGTTTTTTATATTTCCGT
TTGGTTAACAGCATGGAATGGATCAATGTGGCATTATGGGTTACTTATCC
TTTTATGATGTCTCCTATTGCCATCGTTGATGAGATATTCATGATGAGTG
TTTTGGCCAAAATGGTTCCATCTAAGATTCAATCATTTTCTGAAAGCGTT
CGTTTGATGTGCTCCAGATTTGGAGCAACTCTTGGTTTGTTTACTGCAGC
CTTCGCCTTTGAACATATCCTATATGTTTGTCCACTATTCATGGCTATAT
CTTTGGTATTGATGCTTTTCTTGATTTGGAGAAAGGAACACTTTCAAAAT
CCGAGAATGGTGATTTAAATGGTTGCAGTTGATTTTAGCTACAAAGACTG
GCTCAAAAAACGAAAAATAACTACCAGAGTTTTTGTTGCCGTTCAATTTG
CGATAGGTATTGAATATTCGATGACTTTTACAACATTGTACGTGTACTTA
AAGGACGTTTTACACATCACAAACAACCTTAATGCTTTTTATAGCAGTAT
TTGTGGAATATACGTTTTGACACAGATTGTTGCATCGTTGGTTTTATGCC
GCTTGTTTGATAAATGTCGAACATTAAAACTTTTCTTTACTCTCGTTACG
TTTATAACATTTGTTGGAAATGTTTTGTACACAATCCCATTCTCACCGTA
TCTCTTGTTAGCCGGACGTTTCCTTTCCGGAGCTGGAGGCTCCCTGAGAC
CGATTATGTTATCTGAATTGACCAGGTCATATCCTAGTGATGAAGTTATG
GCACAAATGTCGACGATGAGTGTTAGCTATGGTATTGGTTTCACACTTGG
TCCGGCAATTAATTTTGCTTTTGTGAAAGCACGATTTACACTACTTGGTA
TACCGATCGGGTATGCTAATGGAGCTGGATTAGCGTTATCAATCGCATTC
CTAGTAGCTTTTGCTATGTCTCTCTTTTTTGTAAGTGATCTATCAAAAGA
ATTTGACTTAAAAGAGGAAATACAAAAGATGGATGCTGACAAACAATCAG
TAGATAGTTTATGTGGAAGTGAAGAAGATCCATCTGAAATATTCTCTGAT
TTTGATAACGAACCTCTGTTGGGTAAAGATTCTTCCGAGAATAGAACAGA
AGTGAACCAATTAGGAATAATAGAGACTCTTATGAAGTTGTTCTCTTCAA
TAGACATTGTTCTTATTTTTGTTCTCTCGTTTTTCGCCTTCATCACAATG
CTAATGCAAGATCTATGGATACCTATGGCAGTTATAAAACTATTGCATTG
GACAGCCTTGGAAATCAATCTCATTTTCCTGTTCAATGGTACCATTATCA
GTTTAATGTGTTTGTTCTTGGTATTCAAACCGCCATCGAAGAATCAGTTG
GTCAATCTTGGGATTTTGAGTTTTGTAACTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013402-exon-sc0000167-1575043694:25264..26545 | TCONS_00013402-exon-sc0000167-1575043694:25264..26545 | Clytia hemisphaerica | exon |
| TCONS_00013402-exon-sc0000167-1575043694:24130..24658 | TCONS_00013402-exon-sc0000167-1575043694:24130..24658 | Clytia hemisphaerica | exon |
| TCONS_00013402-exon-sc0000167-1510915933:25264..26545 | TCONS_00013402-exon-sc0000167-1510915933:25264..26545 | Clytia hemisphaerica | exon |
| TCONS_00013402-exon-sc0000167-1510915933:24130..24658 | TCONS_00013402-exon-sc0000167-1510915933:24130..24658 | Clytia hemisphaerica | exon |
| TCONS_00013402-exon-sc0000167-1491911889:25264..26545 | TCONS_00013402-exon-sc0000167-1491911889:25264..26545 | Clytia hemisphaerica | exon |
| TCONS_00013402-exon-sc0000167-1491911889:24130..24658 | TCONS_00013402-exon-sc0000167-1491911889:24130..24658 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000167 | supercontig | sc0000167:24130..26545 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0055085 |
transmembrane transport |
| cellular_component |
GO:0016021 |
integral component of membrane |
Blast
The following BLAST results are available for this feature:
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