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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013414 ID=TCONS_00013414|Name=TCONS_00013414|organism=Clytia hemisphaerica|type=transcript|length=914bp
AACACATTCAAAGAAGAAGTAAAGATAACTGAAGAAAAGAGTATCGTTAA
AAAACAGAACATGACTATGATGAAGTTGGTTTTCTTGCTTGCTGCTGTCT
TCATGGTTGTACAATGTGCACCAACAGTGCCAGACGAGGAAAATAACCTT
TCCACTTCAGAAGATGTTTTTGACGCATTGGAAGATTCACCAATGAATGA
TGAAGAAGATAAAGATGAACTCGATGAAGAAATCGAAGATCCTTCATACT
ACCGGAAAAAATGTCGATACGTTCGTAGATGCCGTTCGTCAAGGAAATGT
TCGCGTGTACGTATTCCCGTCAAATACAGCGGAAGCAAAGGTTCTTACCA
AAAGCCAAGATATGAATTACGTTGTAAACCTGTCCGACGTTGTCGACGTG
TTCGCGTTTGCCGTAAAGTTAGAGTTCAAAAAATTTACGCTTACGGAAAA
TAGATGCCAAACACGTGTtatgaaattcaacaaaataggTGCTGGAGATT
CCTGCTTGATTTCTTTAAGTCaagattttatttaaatttatatatttcaa
cctaaattttttcattgtatccattacatttttaatttctttcaaaGAAG
ACAGTggctttatttcaaaataaatgacaCTCATTCAAGAGGAGGTATCG
CGACGATATAATCGCGATATAATAAAATCTTGGTTTTTCACTATTTAAGT
AGCAAGCAATACGAGACAGAGTGAAATTTTAGATCTTTCCAGGATTGATA
TTTTTATAATagcaaatttctaaatgaaaaaaatcaaaaagaggaATAAT
TCTTACCTTCCAGTGAATATTGGGTTCTTCCATTTTTTTGTCGGTGTTTC
ATACATCGGATTTCCGTGCACAGGCCCTCATGGATGACCCCGACCAATAC
TTTACTTGCATTTT Run BLAST on NCBI protein sequence of TCONS_00013414-protein >TCONS_00013414-protein ID=TCONS_00013414-protein|Name=TCONS_00013414-protein|organism=Clytia hemisphaerica|type=polypeptide|length=150bp
NTFKEEVKITEEKSIVKKQNMTMMKLVFLLAAVFMVVQCAPTVPDEENNL
STSEDVFDALEDSPMNDEEDKDELDEEIEDPSYYRKKCRYVRRCRSSRKC
SRVRIPVKYSGSKGSYQKPRYELRCKPVRRCRRVRVCRKVRVQKIYAYGK Run BLAST on NCBI transcript from alignment at sc0000167:103239..105053- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013414 ID=TCONS_00013414|Name=TCONS_00013414|organism=Clytia hemisphaerica|type=transcript|length=1815bp|location=Sequence derived from alignment at sc0000167:103239..105053- (Clytia hemisphaerica)
AACACATTCAAAGAAGAAGTAAAGATAACTGAAGAAAAGAGTATCGTTAA
AAAACAGAACATGACTATGATGAAGTTGGTTTTCTTGCTTGCTGCTGTCT
TCATGGTTGTACAATGTAAGTGAAAAGATTTGCAGACCTAAACGTTTGTT
ACAAGAAAATGAAAAATTTTTGAAGCCTTTGGATGTTCTTAACTTCTTTA
ATTTCAATCCAAATAATGTTCTTTTTTTTCACCATTACGTGAGTATTTAT
TTTTGTCCATTTTCCTAAAAAGAATTGTTAAAAAGCCTGTTCTTTATTTG
TTCATATATTTTTGTCACCGAAGCCTTATGTTCTTATATTTTTTTCTAAG
AAAACGTGTATACAGTTCATTTTGTTTTGCTAAAATACCAATCTTCTTAA
GGAAAAACGCTCACTGTAGACTTTATTAATAAATTCAATTTACTAAGGGA
TATCTCATTTTACAGGTGCACCAACAGTGCCAGACGAGGAAAATAACCTT
TCCACTTCAGAAGATGTTTTTGACGCATTGGAAGATTCACCAATGAATGA
TGAAGAAGATAAAGATGAACTCGATGAAGGTATACACACACAACCTTCTC
ACAGACCCATTAGGATCCCTTCCCACTGGAATAATTGGCCAAAATATCGT
CCGGGAAAACTATACTTGAGTTTTTGTCCCCACTGCAAATAATCAAATAA
ACGCTCACTGTAAAATATTATGCTATTTTTCCAATCCCCACTGAATTTTC
TGACTTAAAAACAAGGGAATTTAAATCCCCAGCCATAAAAGATATGGGAA
TATCAATCCCCATCCAGTTTCAGTCCGTTATTTTTACCCCCACTGGCTGA
AAAAAAATCCTACAAAAGTCTGTGAGAAAAAGGTGTATAAACTATTTCTA
ACATAGGAAACAGCTAAACGTTTTTGAGGCCAAGCTGCTCTATTTTTTTG
CCGCTTCAAGAACAGCTTCTAGTCTTGTTCTCATTTTCATGGCGGAATAG
GCTTGTTACTCCTTTTATATTTTTGACTCTTAAATTTGCTTATTAAACTA
CTTAACTGAAAAGCTTATCCATTTCTCTTGTTCTCAATATTAACAAAAAG
AGTACATTTTATACATTTTTTCTTATTAAGAAATCGAAGATCCTTCATAC
TACCGGAAAAAATGTCGATACGTTCGTAGATGCCGTTCGTCAAGGAAATG
TTCGCGTGTACGTATTCCCGTCAAATACAGCGGAAGCAAAGGTTCTTACC
AAAAGCCAAGATATGAATTACGTTGTAAACCTGTCCGACGTTGTCGACGT
GTTCGCGTTTGCCGTAAAGTTAGAGTTCAAAAAATTTACGCTTACGGAAA
ATAGATGCCAAACACGTGTTATGAAATTCAACAAAATAGGTGCTGGAGAT
TCCTGCTTGATTTCTTTAAGTCAAGATTTTATTTAAATTTATATATTTCA
ACCTAAATTTTTTCATTGTATCCATTACATTTTTAATTTCTTTCAAAGAA
GACAGTGGCTTTATTTCAAAATAAATGACACTCATTCAAGAGGAGGTATC
GCGACGATATAATCGCGATATAATAAAATCTTGGTTTTTCACTATTTAAG
TAGCAAGCAATACGAGACAGAGTGAAATTTTAGATCTTTCCAGGATTGAT
ATTTTTATAATAGCAAATTTCTAAATGAAAAAAATCAAAAAGAGGAATAA
TTCTTACCTTCCAGTGAATATTGGGTTCTTCCATTTTTTTGTCGGTGTTT
CATACATCGGATTTCCGTGCACAGGCCCTCATGGATGACCCCGACCAATA
CTTTACTTGCATTTT Coding sequence (CDS) from alignment at sc0000167:103239..105053- >TCONS_00013414 ID=TCONS_00013414|Name=TCONS_00013414|organism=Clytia hemisphaerica|type=CDS|length=1359bp|location=Sequence derived from alignment at sc0000167:103239..105053- (Clytia hemisphaerica)
AAATCGAAGATCCTTCATACTACCGGAAAAAATGTCGATACGTTCGTAGA
TGCCGTTCGTCAAGGAAATGTTCGCGTGTACGTATTCCCGTCAAATACAG
CGGAAGCAAAGGTTCTTACCAAAAGCCAAGATATGAATTACGTTGTAAAC
CTGTCCGACGTTGTCGACGTGTTCGCGTTTGCCGTAAAGTTAGAGTTCAA
AAAATTTACGCTTACGGAAAATAGGTGCACCAACAGTGCCAGACGAGGAA
AATAACCTTTCCACTTCAGAAGATGTTTTTGACGCATTGGAAGATTCACC
AATGAATGATGAAGAAGATAAAGATGAACTCGATGAAGAACACATTCAAA
GAAGAAGTAAAGATAACTGAAGAAAAGAGTATCGTTAAAAAACAGAACAT
GACTATGATGAAGTTGGTTTTCTTGCTTGCTGCTGTCTTCATGGTTGTAC
AATAAATCGAAGATCCTTCATACTACCGGAAAAAATGTCGATACGTTCGT
AGATGCCGTTCGTCAAGGAAATGTTCGCGTGTACGTATTCCCGTCAAATA
CAGCGGAAGCAAAGGTTCTTACCAAAAGCCAAGATATGAATTACGTTGTA
AACCTGTCCGACGTTGTCGACGTGTTCGCGTTTGCCGTAAAGTTAGAGTT
CAAAAAATTTACGCTTACGGAAAATAGGTGCACCAACAGTGCCAGACGAG
GAAAATAACCTTTCCACTTCAGAAGATGTTTTTGACGCATTGGAAGATTC
ACCAATGAATGATGAAGAAGATAAAGATGAACTCGATGAAGAACACATTC
AAAGAAGAAGTAAAGATAACTGAAGAAAAGAGTATCGTTAAAAAACAGAA
CATGACTATGATGAAGTTGGTTTTCTTGCTTGCTGCTGTCTTCATGGTTG
TACAATAAATCGAAGATCCTTCATACTACCGGAAAAAATGTCGATACGTT
CGTAGATGCCGTTCGTCAAGGAAATGTTCGCGTGTACGTATTCCCGTCAA
ATACAGCGGAAGCAAAGGTTCTTACCAAAAGCCAAGATATGAATTACGTT
GTAAACCTGTCCGACGTTGTCGACGTGTTCGCGTTTGCCGTAAAGTTAGA
GTTCAAAAAATTTACGCTTACGGAAAATAGGTGCACCAACAGTGCCAGAC
GAGGAAAATAACCTTTCCACTTCAGAAGATGTTTTTGACGCATTGGAAGA
TTCACCAATGAATGATGAAGAAGATAAAGATGAACTCGATGAAGAACACA
TTCAAAGAAGAAGTAAAGATAACTGAAGAAAAGAGTATCGTTAAAAAACA
GAACATGACTATGATGAAGTTGGTTTTCTTGCTTGCTGCTGTCTTCATGG
TTGTACAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013414-exon-sc0000167-1575043694:104939..105053 | TCONS_00013414-exon-sc0000167-1575043694:104939..105053 | Clytia hemisphaerica | exon |
| TCONS_00013414-exon-sc0000167-1575043694:104475..104588 | TCONS_00013414-exon-sc0000167-1575043694:104475..104588 | Clytia hemisphaerica | exon |
| TCONS_00013414-exon-sc0000167-1575043694:103239..103923 | TCONS_00013414-exon-sc0000167-1575043694:103239..103923 | Clytia hemisphaerica | exon |
| TCONS_00013414-exon-sc0000167-1510915933:104939..105053 | TCONS_00013414-exon-sc0000167-1510915933:104939..105053 | Clytia hemisphaerica | exon |
| TCONS_00013414-exon-sc0000167-1510915933:104475..104588 | TCONS_00013414-exon-sc0000167-1510915933:104475..104588 | Clytia hemisphaerica | exon |
| TCONS_00013414-exon-sc0000167-1510915933:103239..103923 | TCONS_00013414-exon-sc0000167-1510915933:103239..103923 | Clytia hemisphaerica | exon |
| TCONS_00013414-exon-sc0000167-1491911889:104939..105053 | TCONS_00013414-exon-sc0000167-1491911889:104939..105053 | Clytia hemisphaerica | exon |
| TCONS_00013414-exon-sc0000167-1491911889:104475..104588 | TCONS_00013414-exon-sc0000167-1491911889:104475..104588 | Clytia hemisphaerica | exon |
| TCONS_00013414-exon-sc0000167-1491911889:103239..103923 | TCONS_00013414-exon-sc0000167-1491911889:103239..103923 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000167 | supercontig | sc0000167:103239..105053 - |
Blast
The following BLAST results are available for this feature:
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