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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013527 ID=TCONS_00013527|Name=TCONS_00013527|organism=Clytia hemisphaerica|type=transcript|length=1190bp
CAAATCTCAATGAAAAAAAGGTTTGCATAGTTTTCCAAACGCGGATTGAA
GCAGTATAAACCTCAAAAATTCAAGTCAAAGTGCCTGCTCTCCTATTTAG
GATACCTAAATCTCCAAATTAGGATACAACTCTCCCAAGTAGGAGAGATT
GCCGAcaggtatcctaatttgcacttgttcCTGACTGGAGGAGTCGCTAC
GATAATTAAGAAGTGGAGACGTGCGTGTTTGTTTACTAACACGAGATATA
ATATGTGTTTCGCAACTAGGTCTACCATTATTACAATAATGCTTTGGTAT
AATAAATGCTGACTAAGCCTAAAAGTAATGACAACAATAATGGCGGATAA
GCCGCGAGCAAACTATAAACGATAATATTGGCGTGATGCCTCATCTCCAT
GTCTCTCTCTTCTTGAGTTCGAGTCTCAAGGATACTAAACGTGTAGTGAA
CaataaaccaaaaacaaccaaacaatAATAGTAGAATAAGAAACACGCTA
TCATGTGATCACATGATATTCAACAGAATATAATACACCAAGCTGCCACA
GCTTGagtaacaacaaaatcaaatcccACGATGCGTGACGTGGGCAATCT
ATAAATGACAGGAACAATAAATCTGAATAGTGTTCTGCAAACGACGAAAA
CATTAACTTTCTGGCTGTTACATTTCAGCTCATATCGTAATCGCTAAAGC
GAACAGGGAGACGTGTCTGCCGCTTTGGGCGTGATATATCAACGTCAGGT
GTTTGTGATTGAACGTTGGAGGTAACATTGACAGAGGTTCGAGGTTCTGT
CAAAGCTGCAGGAGGAATCGGCACTGATGGGGGTTCCACTGTTGGGCGAG
GTTGCAGTGGGGCACTGATGGCAGTGTTGGTGTCAGGCGGCGATTCAGTT
TTGTGGGTGGTTTCTTCCTCGTCGTTGTGTGTGGTGGGTTGACCGGAGGA
AGGAGGGTCTGGGACGGGTATGTATGTTGATTACGGTGGACTCTGTAGGA
ATGATTCCTGAGTTGGGTGCCAATGAACTTCTTTACCCGGTACCAAGGGC
TGTCCTGGGATGAGACGATGTAGAGTGGACGAGATTGAGTCTTGTTCCGT
TCAGTGTTGATGTAGACAATTGAGCCTTCAGGGATAGGTAGATCGTTATG
GGAAGGCTTGCAGCTGATCTGATTGTGGCGCATGTTGTAG Run BLAST on NCBI transcript from alignment at sc0000168:188449..189638 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013527 ID=TCONS_00013527|Name=TCONS_00013527|organism=Clytia hemisphaerica|type=transcript|length=1190bp|location=Sequence derived from alignment at sc0000168:188449..189638 (Clytia hemisphaerica)
CTACAACATGCGCCACAATCAGATCAGCTGCAAGCCTTCCCATAACGATC
TACCTATCCCTGAAGGCTCAATTGTCTACATCAACACTGAACGGAACAAG
ACTCAATCTCGTCCACTCTACATCGTCTCATCCCAGGACAGCCCTTGGTA
CCGGGTAAAGAAGTTCATTGGCACCCAACTCAGGAATCATTCCTACAGAG
TCCACCGTAATCAACATACATACCCGTCCCAGACCCTCCTTCCTCCGGTC
AACCCACCACACACAACGACGAGGAAGAAACCACCCACAAAACTGAATCG
CCGCCTGACACCAACACTGCCATCAGTGCCCCACTGCAACCTCGCCCAAC
AGTGGAACCCCCATCAGTGCCGATTCCTCCTGCAGCTTTGACAGAACCTC
GAACCTCTGTCAATGTTACCTCCAACGTTCAATCACAAACACCTGACGTT
GATATATCACGCCCAAAGCGGCAGACACGTCTCCCTGTTCGCTTTAGCGA
TTACGATATGAGCTGAAATGTAACAGCCAGAAAGTTAATGTTTTCGTCGT
TTGCAGAACACTATTCAGATTTATTGTTCCTGTCATTTATAGATTGCCCA
CGTCACGCATCGTgggatttgattttgttgttactCAAGCTGTGGCAGCT
TGGTGTATTATATTCTGTTGAATATCATGTGATCACATGATAGCGTGTTT
CTTATTCTACTATTattgtttggttgtttttggtttattGTTCACTACAC
GTTTAGTATCCTTGAGACTCGAACTCAAGAAGAGAGAGACATGGAGATGA
GGCATCACGCCAATATTATCGTTTATAGTTTGCTCGCGGCTTATCCGCCA
TTATTGTTGTCATTACTTTTAGGCTTAGTCAGCATTTATTATACCAAAGC
ATTATTGTAATAATGGTAGACCTAGTTGCGAAACACATATTATATCTCGT
GTTAGTAAACAAACACGCACGTCTCCACTTCTTAATTATCGTAGCGACTC
CTCCAGTCAGgaacaagtgcaaattaggatacctgTCGGCAATCTCTCCT
ACTTGGGAGAGTTGTATCCTAATTTGGAGATTTAGGTATCCTAAATAGGA
GAGCAGGCACTTTGACTTGAATTTTTGAGGTTTATACTGCTTCAATCCGC
GTTTGGAAAACTATGCAAACCTTTTTTTCATTGAGATTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013527-exon-sc0000168-1491911889:188449..189638 | TCONS_00013527-exon-sc0000168-1491911889:188449..189638 | Clytia hemisphaerica | exon |
| TCONS_00013527-exon-sc0000168-1510915933:188449..189638 | TCONS_00013527-exon-sc0000168-1510915933:188449..189638 | Clytia hemisphaerica | exon |
| TCONS_00013527-exon-sc0000168-1575043694:188449..189638 | TCONS_00013527-exon-sc0000168-1575043694:188449..189638 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000168 | supercontig | sc0000168:188449..189638 . |
Blast
The following BLAST results are available for this feature:
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