TCONS_00013592 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00013592
Unique Name	TCONS_00013592
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1515

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000170:49107..61030-

transcript sequence

>TCONS_00013592 ID=TCONS_00013592|Name=TCONS_00013592|organism=Clytia hemisphaerica|type=transcript|length=1515bp
TAATATAATtaataaagaaataaagaaaaaagcaaaatggcagaaaatac
tacaaaaagagagaaaattgcCCAGATGTCTTCTGAGGTTGTGGATAGTA
ATCCATATAgtCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATAAT
TATGAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGATTGGAGGTGT
GGGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTATAGGAAAGCTAA
TTATGTTTGATTATGACAAAGTAGAACTTGCAAATATGAACAGACTGTTT
TTTCGACCTGATCAATCTGGGATGAGTAAAGTTGACGCAGCTGTAAATAC
GTTAAgGGATATAAACCCTGATGTAGAGTTCGAAGCACACAATTACAATA
TTACAAGTGTAGATAATTTCAATCATTTCATGGGCAGAATAAAATCAGGT
GGCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGTTGATAATTT
CGAAGCAAGAATGGCTATTAATACTGCGTGTAATGAAATCGGTCAAGCAT
GGATGGAATCAGGGGTCAGTGAGAATGCTGTATCAGGACATGTTCAAGTC
ATATTACCTGGTGAAACAGCTTGTTTTGCTTGTGCACCACCGTTAGTAGT
GGCATCAAACATTGATGAGAAGACATTGAAGCGTGAAGGAGTATGTGCTG
CTTCTTTACCCACCACCATGGGAATTGTTGCTGGTTTCCTCGTACAAAAT
ACACTAAAATACTTACTGAAGTTCGGTACAGTATCATACTACTTAGGTTA
CAACGCAATGCAGGATTTCTTTCCAACAATGATTATGAAACCCAACCCGC
ATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACCAGGAGAAG
TTAGCAAAACAACCGAAGGAAGAAGGCGTTaaagaaactgaagaagaaga
aattgttCACGAAGATAATGAATGGGGTATTTCATTGGTCGACGAGTCAT
CCGATTTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTCG
TACGCATATACTAAACCTGCAGAAACAACAGAAGAACAGACTGAACCAGC
CTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTCTAGAGGATT
TAATGagacaaatgaaacaaatttagttcttttttagatttaatttacga
aaaaatcttcttttttaatttttttaagggGGTTGGGtctcttctttatt
tttttttgcaaaaatcaacaGAAGCGAGGCGTGATCTTCTAGCTTTGAAC
AATTCATACCTTTTTCGCCCGGGCTTTTTCgtcaaaaagtctttgaaatC
CGACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGCTTTAataattat
tgaatttgaatttttgaaccaaatttttaaatttctttttattttttatg
tacTTAAGTGgtataaattttatttattatacaaTACTGAACAATGAAAT
TAAAAcagaaaatca

Run BLAST on NCBI

transcript from alignment at sc0000170:49107..61030-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00013592 ID=TCONS_00013592|Name=TCONS_00013592|organism=Clytia hemisphaerica|type=transcript|length=11924bp|location=Sequence derived from alignment at sc0000170:49107..61030- (Clytia hemisphaerica)
TAATATAATTAATAAAGAAATAAAGAAAAAAGCAAAATGGCAGAAAATAC
TACAAAAAGAGAGAAAATTGCCCAGATGTCTTCTGAGGTTGTGGATAGTA
ATCCATATAGGTATATTTTATTATTTCATCTTGTCTTTCTATCATTAATT
TGTCTTATAATTTAGCATATTTTGGTGCACGTGCTACTGTACTTGATCAG
TTTTGTTTTTAGGAAGCTCTAGTCTACAGCTATTGGCTTTTATAGTTATA
AATAAATTTTTGGTTAACGTGTATGTCTGTTTTCTTCAAAAGTTGTCTTA
TGATTGTGACTATCTTCTGGGTTATGTCTGTTTATAACCTTAGTTAAAAA
TCTATTATCAATCCTTACAACACTTTGGTTTTTTTTATAAATTGTGATTA
GTTTTACTTCTTTAGTTGTTCTTTTTCTTCAATTACACTCGACTTTAAAA
ATCATTAGATATATTAGCACAGTTTAGTGGCCAATATACCCAATATACTA
TAATCCTGTACAATTTTGTAATGGTTCAAATTTTCTCGCAAAACAGAATA
TCAGAGACTATATCAGGCTTATACTTTGTTAAAATTGTAAGAACAATCGA
GCTCTAGTTTTTTCATTTCAAGATAATCCACTTTTTTGTTCAAAAAACTC
AACATGATTTTTTTTTAACTTTCAGTCGTTTGATGGCTCTGAAAAGGATG
GGAATAGTTGATAATTATGAGGTAGGGCATCATTTAAAAAATTTATACGT
CAAAAATAAAATGTATAAAAGGAACCAAGAAATTAAATTTTATATAACCT
TGCTATACATTCTTTTCAGTTTTGATTATTTGTCATATTTGCAAGAAAAA
TGTAGAAATGTATAAAATCGGAACACGAAATGATAAAAACGTTTTCTAAG
AAAGTGGGAAAATATTGATTTTAAGTCATGTGGCTTTTTTATGATCATAT
TATGATTTAGTCAAACATACAGCAATGCACAAAGTTCATTTGTCTCGTCT
TTATCATTCCGTTCTTCACAATTTGGAGAATCCAGGTTTATTTTTGTGTA
GGATTAAGTTTCCTTCTGAAATTTAAAAAATTTTAATTTAAAGATCCAAA
TTTACAAAAAGTTATTCCCCTCTTTTTCAGCGTATTCGTGATTACAGCAT
TGCAGTAGTTGGGATTGGAGGTGTGGGCAGTGTAACTTCAGAAATGTTGA
CCAGGTGTGGTATAGGAAAGGTAACGTAATGTGTTTTTAGGTTAGATATT
AAAAAATCAAATCAAATATTTAAAAACAAGCTCTCCTAGGATGATATAGT
GCAATACTTTTACTTAAAGGTTTTGTTTTTAAATAAGAGTGATCGTTTGC
TTATTCATCAATTTTAATTTACAAGCTATTTCACATTGGATTGACACGGA
TGTGGAGCAAGATGATTAAAAAGAGGGAAAGAAAAACAGTTTTTATATCA
GCACAAGATAACAATAGGCAGACACTGTCCTGATATGAAATATGTGTCTC
ATATGAAACGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATTACA
TTTTNCCAGATGTCTTCTGAGGTTGTGGATAGTAATCCATATAGGTATAT
TTTATTATTTCATCTTGTCTTTCTATCATTAATTTGTCTTATAATTTAGC
ATATTTTGGTGCACGTGCTACTGTACTTGATCAGTTTTGTTTTTAGGAAG
CTCTAGTCTACAGCTATTGGCTTTTATAGTTATAAATAAATTTTTGGTTA
ACGTGTATGTCTGTTTTCTTCAAAAGTTGTCTTATGATTGTGACTATCTT
CTGGGTTATGTCTGTTTATAACCTTAGTTAAAAATCTATTATCAATCCTT
ACAACACTATGTTTTTTTTTATAAATTGTGATTAGTTTTACTTCTTTAGT
TGTTCTTTTTCTTCAATTACACTCGACTTTAAAAATCATTAGAGATATTA
GCACAGTTTAGTGGCCAATATACCCAATATACTATAATCCTGTACAATTT
TGTGATGGTTCAAATTTTCTCGCAAAAAGGAATATCAGAGACTATATCAG
GCTTATACTTTGTTAAAATTATAAGAACAATCGAGCTCTAGTTTTTTCAT
TTCAAGATAATCCACTTTTTTGTTCAAAAAACTCAACATAATTTTTTTTT
AACTTTCAGTCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATAATT
ATGAGGTAGGGCATCATTTAAAAAATTTATACGTCAAAAATAAAATGTAT
AAAAGGAACCAAGAAATTAAATTTTATATAACCTTGCTATACATTCTTTT
CAGTTTTGATTATTTGTCATATTTGCAAGAAAAATGTAGAAATGTATAAA
ATCGGAACACGAAATGATAAAAACGTTTTCTAAGAAAGTGGGAAAATATT
GATTTTAAGTCATGTGGCTTTTTTATGATCATATTATGATTTAGTCAAAC
ATACAGCAATGCACAAAGTTCATTTGTCTCGTCTTTATCATTCCGTTCTT
CACAATTTGGAGAATCCAGGTTTATTTTTGTGTAGGATTAAGTTTCCTTC
TGAAATTATTGAAATTCTAATTTAAAGATCCAAATTTACAAAAAGTTATT
CCCCTCTTTTTCAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGATT
GGAGGTGTGGGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTATAGG
AAAGGTAACGTAATGTGTTTTTAGGTTAGATATTAAAAATCAAATATATA
AAAACAGCTTTTAATTTACAAGCTATTTCACATTGGATTGGCACAGATGT
GGAGCAAGATGATTAGAAAGAGGGGAAGAAAAACAGTTTTTATCAGCATA
GTATAACAATAGGCAGACACTGTCTTGATTTGAAATATGTGTCTCATATG
AAATGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATTACATTTCG
ATGATAACATTTTAAAGGTCGTTTTCAGGTATTCAATCATCGAATTTTAG
ATTTTTTACAATTTTAGATTTTATGACTGGGCTAATCAATAACAAATTTA
ATCGAGGTGTTAAATTCTTTTTGGAAGCTCTCAATCCCCTAGACTTTGAT
AAATTTATTACTGATCCCAGCATTTCCAAAGAAATACTGAAAATACTCTC
AAGCTATACTTTAACTTTTCCTCTACTTTAGCTAATTATGTTTGATTATG
ACAAAGTAGAACTTGCAAATATGAACAGGTATGTCTGCTTTCTAATCAAA
ATGCAAGGTATATACCCCTAGTCTCTTTCAATTTCTATCTTTTAAAGTTA
AGTATCCAAGGTTGCAGAAAATGGTTGCTATCAACTTTTTATCAGAGTAT
TTAACTTTTCTTCTGATTCTAGACTGTTTTTTCGACCTGATCAATCTGGG
ATGAGTAAAGTTGACGCAGCTGTAAATACGTTAAGGTTTGGAATTTTTTA
TTGAAGACCAAAATATTCTATCTGTACTCATGGGTAATCACCTCATGTTG
GTTAAAATTTTGGAGGTTTTTGCGTCTAACCAACAGCAAGCCGTTATGAG
GGCGCAATCAGTCCTGATTACTAATGATTCATTTGAAATGATCCTATATT
TTTCGTATATTTTTCATGATTCAGCACTACTATAGGCTGCACGCAGCCCC
TCTGATATGTTTTGATATAGGGGCTGAGTGTCGTGTATGAAATCCTCCTC
CGAGAGTTACCCCCGTCTTTGTGTTTTTGAATTTTAGAAACTTGATTAGC
TTGTGATTTTCAATACCCGTCGCCGAAAAAAAAATCTCATCATAATTAAA
CTTCTTATACGCCTCAAAGAGTTGAAAAACCTCTCTAAATAATCGAAATC
TCATCGTTTGACTTTTAATAACAGTATTTTTCATTCCCTGTTTTTAGGGA
TATAAACCCTGATGTAGAGTTCGAAGCACACAATTACAATATTACAAGTG
TAGATAATTTCAATCATTTCATGGGCAGAATAAAGTAAGATAAGTATTGA
TTTATATTTATTTATTTATATGTTGTGTTTGTTTTAAAATTTTGTTTTGA
AACACCAAAAATGGTTTTTAGTAATTCTTTTCCTAGGCCCTTAAATCTGG
CTAAATGTTTTATCTGAAATGGTCAAAGTACACTTGACACGTTTTTTTAG
ATCAGGTGGCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGTTG
ATAATTTCGAAGCAAGAATGGCTATTAATACTGTAAGTAAGATCTATTTT
TCTGTTCTAGTTTTCCATCGTTTACCCCGTGAAATTAAATTAATTAATAT
TTCTCGTGAATTCCCCTTTCAAAAGGTACTCTGGGCTTACAAGACTTCTT
CCGTCTCCAATATTTTATAATAGGAATAAAATTAAAATATTGTTTTTAAG
GCGTGTAATGAAATCGGTCAAGCATGGATGGAATCAGGGGTCAGTGAGAA
TGCTGTATCAGGACATGTTCAAGTCATATTACCTGGTGAAACAGCTTGTT
TTGCTGTAAGTAGTCTATATGTCACCATCTGCACAGATATCTTATTTAAA
ACACTAGATGGAGCCACTCTGTTGCTGGCTGAAGTAAAACAATGCACAGT
ATTTAAAAGTAGACCACAGCAACTGTGCTATTAGCCAGGAGTTTGACCAT
CTACCCATTCCATGCTCTGTTTGCATTTCTCGACTTCAATTATTGTGAAG
TCGAACAAAAACATCTTTTTCTTAGCACTACTGAAAAAGGCCAGAAAAGG
CTCGATTTTGGTCAAGATAAGAACATACATGGCGCGAGGATCATCGCCCC
AGAACAAGTATCGCGTTTTCGACTAATTTAAGCCTTTTACCTGCTTTTAC
AAATATTTGGAGATATCGATGTATTTACTTGAACTGTCGTTTGATCGAAG
ACAATTAGTCCAGAACTCATACCTAAAAAGCCTTGGGGCGTTTTATGCCT
AAATTACTTATCGGCCTTTTTACGCAGACCCTAATTTAGCGCCGGCCCCT
ATTAGGCCAAAGCTAAATTTTTAGCCCGATTCCTTACGCCGCCCCCTATT
ACGCCAGTGACGAAAAAGTAACGCCATTAAGGACCGGATTAAGAAATGGC
TGATAAAATAATAATGATAACTTGTAATTTCGATTTTTAAAAGACAGTTT
ATATTGATTGTCTTTGGGACATAATGGTGAATTCTTGATTTATTTTTACT
AGTGTGCACCACCGTTAGTAGTGGCATCAAACATTGATGAGAAGACATTG
AAGCGTGAAGGAGTATGTGCTGCTTCTTTACCCACCACCATGGGAATTGT
TGCTGGTTTCCTCGTACAAAATACACTAAAGTAAACAAGTTTTCATCTTT
ATGTTTCTACTGTAAATTTTAAGTTGAATCGTAGCTTTCTAAAAGTTTTT
CACCTTTAAATATTACTCCCATAAGTCACTGCACGCCTACTAAAGTCTGT
TCACGATAAGTGTGCACTCTTTTTTCTTTTATCTATAACTTTTGAAGGAA
TTCTTCAATCTTTATAAATTTGGTATTATTGGAAAGATATCAGTGAGTGG
AACAATTTGAAATAAAAAAATCTTTTAAAAAATTCTAAAAATGAAGATGA
AAATGAAGAAGAAAAAAATGAAGATCTTATAGAAAAGTGCTATAACTGTC
ATTTTCACTGAAGTGAATCCTTGATCATCGAACATTATCACTGAAAAAAT
TTCTCAAAAATAATTATTTTGTCAAAAGATATCAAACAAAGTTATAAGCT
GATTGACGTCTAAAAACGCTGTTTTCTGCTGTTTTCTGCTTTTTTGGGGT
CAATCACTTATTAACTTTGTATCATAACTTTATATTGAATGAATATTCTA
GTGAAATTTCTTCACACTGATAACCTCCTAAGATCAAAGAATCTCTCCAG
TGAAAATGAAAGTCAAAGCCCTTCTCTACAAGATCTTCATTTTTTTCTTC
TTCATTTTCATCCTCGTTTTTAGAATTTTTTCAAAGATTTTTTTATTTCA
AATTGTTTCACTCACTGATATCTTTCCAACAATACCAAATTTATAAAGAT
TGAAGAATTGCTTAAAAAGTTATAGGTTAAAGAAAAAAGAGTGCACACTT
ATCGTGAATAGACTTTAGACCTGTAGATTTGGAATGCCATGAGTTGAAGT
AATTATTTTTTCGCCATTCAATGACTTATACATCTACTTATTTTTGAATA
ATTGTAAAAAACCTTGGACCTCAAAGAATATTATTATAGTGTGTTTATAT
TTTAATGACCTGTTTAGTTGCCTTGAGAATTTATTAGCAAATAATTACCA
TAAGCAGTACGGCACGATATCCTATATTTAAGGACCTTATATTTTTAGAA
CCGTCCTTATATAGGGATGTCCTTATATTTAAGGACCTTTTTTCTACTGG
ATCGATAAAAACCCGATCTAGTAAGCAAAGGTCCCTATTTATGGGGACGT
CCTTAAATATAGGTCCTCTCCCGTACAGATAAGGGAACTAATTTAGGCGA
ATTTGGCGAAATATTCAACCAAAATTGAAATAATTGCTGGCTCTGGCTTT
CAGTGTAAAGAAACTGATTTGCCATACCATTCGCCAAACTTAGTTCTCGC
CAAAAATAAAATTGCGTTTCTCATCAAAATGATTTCTTTTTAAAAATTTC
CCGGATACTGTTTTCCGATACCCTTCACACGTATTGATTTCTCTAAAATG
GTGGCTTCTAGGCTACGCCATCTTCCTTCGTTTCGAGCGTAAAACTTCTA
CTCTTCGGGATATGCTCGCAGCTCTTGTTTTGAATATTTCTCCGGATACA
TCGCATGCGCACTGAGGTTGTAAAGGAACAATCGAGAGTTTCGAAACCTA
AACCAATCAGCTGTGTTTCAAACATTCTTTTATTTGAAACCTCTATTGAT
AAACATCTTTTGTTAAAGTTTTCTATTATTTTTAAACCTAGTAATAAGCG
AATTTCCGGTGGGGGTCACTAGTTGCCTCCCATAGCAGTGCCTATAGACC
AAGAGTAAGGCCTAAAAGCCTGTAGCTGTCTATTGTTTAGACTAGGTTGC
TTTTCAATCACAAGATAGTTATGATATATCATTGATTTTCAAATTCTTGT
TTGCATATCTTTTCAGATACTTACTGAAGTTCGGTACAGTATCATACTAC
TTAGGTTACAACGCAATGCAGGATTTCTTTCCAACAATGATTATGAAACC
CAACCCGCATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACC
AGGTGAGCCAGGGCGACCCCCCCCCCCAAGGGCCCCCCCCCCCCCGTCCC
CTAGAAAGGAGGGTACTTAAAATCTTCCAAAAATAGGCCTTATCGAAGTT
TTTGATTTTTCTAAAAAAATCGATGCATTGTGGGATTTTTTCGAGTGTAT
TACAATAGAAATCTCTTAGGAATTCATCGAGGGAATTCTATTGTAATACA
CTTGAAACAATCCCACAATGCATTGCTTTTATAGAAAAATCAAGGTCTAT
TACTAAAAGGCAGGGTAAAGAACAAAACAAACTGTACCAAAGATTGTTAT
TTTCGAAAGTCTGTCCTTTTGGGATCAAAAAAAGCTGGAATGGATTTTTT
TGGGGGTAGGTACATTATGCACTAAGTGGAGATTTAAGTTGTAAATTTAT
TAAGGTATGGATGGATTTTTCAGGGAAACCCAACTACGCACAAAGGGGAG
TGTTTCTACGGAAACTGTAATTTTTCAACAGAATGCTATGATAGAAAAGA
AATTCATGATATGCACCATTGCAATGTCTTCCATTCCACCCAATAGCTGA
TTGGTTGTAAGTGACGTATTGACTGATTTTACGTCACTTACAACCAATCA
GCTGTTGGGTCCGTGATGTAATGTCAGAAGACATTGCAGTGGTGCATATC
ATGAATACCCCATTTCATTCACAGTCGAAATGAATCATGGGTAATCAGGA
CCACCACGCTCCGATAAGGACTTTCAATTGGTCTAAATTTTAGGATGTTT
TTGTGTCTAGCCAACGAAAAGCTGTTATGGAGGCGCAATCATTCCTGATT
ACCCATGATTCATTTAGACTGTAAAATGGCTTAGAGAGGCCTTTAATATA
TCCTTTTCTAACTTTTAAACATAACTTTTTTATTCTTTACTTTACCTCAC
AGGAGAAGTTAGCAAAACAACCGAAGGAAGAAGGCGTTAAAGAAACTGAA
GAAGAAGAAATTGTTCACGAAGATAATGAATGGGGTATGTAAAGTCTACT
TCACTAGCAGGGAACAATAGCAAAGACTGTAATACTTTCGTTATAGTTTG
TATTTGAATAACATTCTTCTGATCGTTGAAAATATTTTTGTAAGACCTTT
GAAGTAAACCATTTTTCCTATGTCTGTAAATATTAATCTGTGAGTTCCCA
CGCGGTTTATTTTAAACATGGCAAACTGCTTCTTTGTCTGTACACCCAGT
ATCTACAGCTAATTCCAAAATTCATTGCCGTAGGGGATAAACGTACTCCG
TACTACGAAGCGATAAACGTGAGATACACTCTGGTACATAGTAACTGCTT
CTATGCTTGGTGTTTAATAGGATTTTTAATGGTATTAAAAATCTTTCCGA
AGATAGTTAAAGAAGACTCTTTCTCCCTGGATTGCTCTACCTACCCTTAA
TCATTCTCTTAGTTGCTAAGCATCAAGCAGAGAGGCGTCAAAGTACCATT
TTGGGAATCTTTGGTATGATCCGGCTGGGGGTCGAACCCACAACCTTGCG
CACCGTAGCCGGGTGCTCTACCACTGCACTACGGTCTGAATAAACTGAAA
CATATTTAATGTACCTTTTACTTGCACTTTTTAATCACCATAGGTATTTC
ATTGGTCGACGAGTCATCCGATTTACGGGAGGACACACAACTACAAGAAT
TGACTACTGGACTTTCGTACGCATATACTAAACCTGCAGTGAGTCCTTTC
TATGTATTAATGCTGACAAGCTTGATAAGATACTACCATTTTTAATAATT
TATTTTAAAAGCGAAATGCTTTGTCAAGAGACACAATTCAGTTTTTTTTC
TAACAAGCAAGTTTTAAAGTGTATGAAATGATAAACAAAATTTAAACCTT
TCCATATTATGTAACCTTTTTCAACGGAAAAAAGGAAAAAAGGCCAAAGC
CAAAATCTCCAACTAAAATCCAATTAAAAATGTCGATGATGTTATTAGCC
CTGGGTTCGAGGGTGGGTTCTTTGTTTTGTAAAATTCATGATATGTACCA
TTACAATGTCTTCCAAGTACCCATTAGCTGATTGGTTGAAAGTGACGTAA
AAAGACTAAATTGATTGATTTTACGTCACTTACAACCAATCAGCTGTTGG
GTCTTTAATGTAATGTAAGAAGACATTGCAATGGTGCATATTATGAATAG
GGACCTTTAGCATCTAGGACGGCAGGATTGAACAAAAATGCCCTTGGGAT
TGATATGTGGATCGCAGCTAGATTCTTANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
CTTTTTTATTCTTTACTTTACCTCACAGGAGAAGTTAGCAACACAACCGA
AGGAAGAAGGCGTTAAAGAAACTGAAGAAGAAGAAATTGTTCACGAAGAT
AATGAATGGGGTATGTAAAGTCTACTTCACTAGCAGGGAACAATAGCAAA
GACTGTAATACTTTCGTTATAGTTTGTATTTGAATAACATTCTTCTGATC
GTTGAAAATATTTTTGTAAGACCTTTGAAGTAAACCATTTTTCCTATGTC
TGTAAATATTAATCTGTGAGTTCCCACGCGGTTTATTTTAAACATGGCAA
ACTGCTTCTTTGTCTGTACACCCAGTATCTACAGCTAATTCCAAAATTCA
TTGCCGTAGGGGATAAACGTACTCCGTACTACGAAGCGATAAACGTGAGA
TACACTCTGGTACATAGTAACTGCTTCTATGCTTGGTGTTTAATAGGATT
TTTAATGGTATTAAAAATCTTTCCGAAGATAGTTAAAGAAGACTCTTTCT
CCCTGGATTGCTCTACCTACCCTTAATCATTCTCTTAGTTGCTAAGCATC
AAGCAGAGAGGCGTCAAAGTACCATTTTGGGAATCTTTGGTATGATCCGG
CTGGGGGTCGAACCCACAACCTTGCGCACCGTAGCCGGGTGCTCTACCAC
TGCACTACGGTCTGAATAAACTGAAACATATTTAATGTACCTTTTACTTG
CACTTTTTAATCACCATAGGTATTTCATTGGTCGACGAGTCATCCGATTT
ACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTCGTACGCAT
ATACTAAACCTGCAGTGAGTCCTTTCTATGTATTAATGCTGACAAGCTTG
ATAAGATACTACCATTTTTAATAATTTATTTTAAAAGCGAAATGCTTTGT
CAAGAGACACAATTCAGTTTTTTTTCTAACAAGCAAGTTTTAAAGTGTAT
GAAATGATAAACAAAATTTAAACCTTTCCATATTATGTAACCTTTTTCAA
CGGAAAAAAGGAAAAAAGGCCAAAGCCAAAATCTCCAACTAAAATCCAAT
TAAAAATGTCGATGATGTTATTAGCCCTGGGTTCGAGGGTGGGTTCTTTG
TTTTGTAAAATTCATGATATCTACCATTGCAATGTCTTCCAAGTACCCAT
TAGCTGATTGGTTAAAAGTGACGTAAAAAGACGAAATTGATTGATTTTAC
GTCACTTACAACCAATCAGCTGTTGGGTCTTTAATGTAATGTAAGAAGAC
ATTGCAATGGTGCATATTATGAATAGGGACCTTTAGCATCTAGGACGGCA
GGATTGAACAAAAATGCCCTTGGGATTGATATGTGGATCGCAGCTAGATT
CTATTCTTTTCATATCAATTTTCTCATGAGAATAGTGAATTTTAATAGGG
TAATTTTCAAATCTCAAGACGATATGAAAATTCTTTTCTGACGTCGTCTT
TGAGAAGATGGTAAAGGAAGAGTGCAATAGTTTTTAATGATATGAATCAC
TAGAGAATTATAACGTGATCTACAAAAAAATTGACTATATTTCAAATTAT
AGTTAATTCTAGATAAAATCGGATAAAATTTGCCGTTTGATTTAAGATTT
ACTTCACGTCCCTAAAGGTCCCTAATATTGTGTCCGTTACAGACGGAAAT
TTGATCCGAAGATCTTATATTTTCGGACAGAGCTTGTTTTTTCGGAAAAT
GAAGTTAATTCCAGACTTCTTTTAAGATGTCTTACTTTAAAATATCAACC
GAACTCTAAAGCAAAAACTAGAGCGTACATTTCTATGGAAATTTGGAAAG
TTTTTCTGGGTAGTGAGAAAGTTGAGTAGCATTACAGTACCTTTTATATA
AGTTCTATAAGTTCTTTCTTTATCCCATAGGAAACAACAGAAGAACAGAC
TGAACCAGCCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTC
TAGAGGATTTAATGAGACAAATGAAACAAATTTAGTTCTTTTTTAGATTT
AATTTACGAAAAAATCTTCTTTTTTAATTTTTTTAAGGGGGTTGGGTCTC
TTCTTTATTTTTTTTTGCAAAAATCAACAGAAGCGAGGCGTGATCTTCTA
GCTTTGAACAATTCATACCTTTTTCGCCCGGGCTTTTTCGTCAAAAAGTC
TTTGAAATCCGACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGCTTT
AATAATTATTGAATTTGAATTTTTGAACCAAATTTTTAAATTTCTTTTTA
TTTTTTATGTACTTAAGTGGTATAAATTTTATTTATTATACAATACTGAA
CAATGAAATTAAAACAGAAAATCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_007592	XLOC_007592	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000170	supercontig	sc0000170:49107..61030 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	1.72543e-07	0	0.000431921	7.39319e-05	0.250135	0.000525797	0.337889	0.199135	1.65122	0.0441298	0.0211223	0.0474387	0	0	0.208836	0	0	0	0	0	0	0	0.0653176	0.0280133	0	0	0	0

Blast

[Close]

BLAST of TCONS_00013592 vs. Swiss-Prot (Human)
Match: UBA5 (Ubiquitin-like modifier-activating enzyme 5 OS=Homo sapiens GN=UBA5 PE=1 SV=1)

HSP 1 Score: 468.389 bits (1204), Expect = 1.743e-161
Identity = 226/288 (78.47%), Postives = 261/288 (90.62%), Query Frame = 1

Query:   58 REKIAQMSSEVVDSNPYSRLMALKRMGIVDNYERIRDYXXXXXXXXXXXXXTSEMLTRCGIGKLIMFDYDKVELANMNRLFFRPDQSGMSKVDAAVNTLRDINPDVEFEAHNYNITSVDNFNHFMGRIKSGGLN-GKPVDLVLSCVDNFEARMAINTACNEIGQAWMESGVSENAVSGHVQVILPGETACFACAPPLVVASNIDEKTLKREGVCAASLPTTMGIVAGFLVQNTLKYLLKFGTVSYYLGYNAMQDFFPTMIMKPNPHCDESFCLKRQQAYQEKLAKQPK 918
            R +I +MSSEVVDSNPYSRLMALKRMGIV +YE+IR +++A+VG+GGVGSVT+EMLTRCGIGKL++FDYDKVELANMNRLFF+P Q+G+SKV AA +TLR+INPDV FE HNYNIT+V+NF HFM RI +GGL  GKPVDLVLSCVDNFEARM INTACNE+GQ WMESGVSENAVSGH+Q+I+PGE+ACFACAPPLVVA+NIDEKTLKREGVCAASLPTTMG+VAG LVQN LK+LL FGTVS+YLGYNAMQDFFPTM MKPNP CD+  C K+Q+ Y++K+A  PK
Sbjct:   37 RVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPK 324

The following BLAST results are available for this feature:

BLAST of TCONS_00013592 vs. Swiss-Prot (Human)

BLAST of TCONS_00013592 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
UBA5	1.743e-161	78.47	Ubiquitin-like modifier-activating enzyme 5 OS=Hom...	[more]

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TCONS_00013592 (transcript) - C. hemisphaerica