TCONS_00013597 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013597
Unique NameTCONS_00013597
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1517

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013597 ID=TCONS_00013597|Name=TCONS_00013597|organism=Clytia hemisphaerica|type=transcript|length=1517bp
ATTAATATAATtaataaagaaataaagaaaaaagcaaaatggcagaaaat
actacaaaaagagagaaaattgcCCAGATGTCTTCTGAGGTTGTGGATAG
TAATCCATATAgtCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATA
ATTATGAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGATTGGAGGT
GTGGGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTATAGGAAAGCT
AATTATGTTTGATTATGACAAAGTAGAACTTGCAAATATGAACAGACTGT
TTTTTCGACCTGATCAATCTGGGATGAGTAAAGTTGACGCAGCTGTAAAT
ACGTTAAgGGATATAAACCCTGATGTAGAGTTCGAAGCACACAATTACAA
TATTACAAGTGTAGATAATTTCAATCATTTCATGGGCAGAATAAAATCAG
GTGGCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGTTGATAAT
TTCGAAGCAAGAATGGCTATTAATACTGCGTGTAATGAAATCGGTCAAGC
ATGGATGGAATCAGGGGTCAGTGAGAATGCTGTATCAGGACATGTTCAAG
TCATATTACCTGGTGAAACAGCTTGTTTTGCTTGTGCACCACCGTTAGTA
GTGGCATCAAACATTGATGAGAAGACATTGAAGCGTGAAGGAGTATGTGC
TGCTTCTTTACCCACCACCATGGGAATTGTTGCTGGTTTCCTCGTACAAA
ATACACTAAAATACTTACTGAAGTTCGGTACAGTATCATACTACTTAGGT
TACAACGCAATGCAGGATTTCTTTCCAACAATGATTATGAAACCCAACCC
GCATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACCAGGAGA
AGTTAGCAAAACAACCGAAGGAAGAAGGCGTTaaagaaactgaagaagaa
gaaattgttCACGAAGATAATGAATGGGGTATTTCATTGGTCGACGAGTC
ATCCGATTTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTT
CGTACGCATATACTAAACCTGCAGAAACAACAGAAGAACAGACTGAACCA
GCCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTCTAGAGGA
TTTAATGagacaaatgaaacaaatttagttcttttttagatttaatttac
gaaaaaatcttcttttttaatttttttaagggGGTTGGGtctcttcttta
tttttttttgcaaaaatcaacaGAAGCGAGGCGTGATCTTCTAGCTTTGA
ACAATTCATACCTTTTTCGCCCGGGCTTTTTCgtcaaaaagtctttgaaa
tCCGACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGCTTTAataatt
attgaatttgaatttttgaaccaaatttttaaatttctttttatttttta
tgtacTTAAGTGgtataaattttatttattatacaaTACTGAACAATGAA
ATTAAAAcagaaaatca
Run BLAST on NCBI

transcript from alignment at sc0000170:49107..61032-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013597 ID=TCONS_00013597|Name=TCONS_00013597|organism=Clytia hemisphaerica|type=transcript|length=11926bp|location=Sequence derived from alignment at sc0000170:49107..61032- (Clytia hemisphaerica)
ATTAATATAATTAATAAAGAAATAAAGAAAAAAGCAAAATGGCAGAAAAT
ACTACAAAAAGAGAGAAAATTGCCCAGATGTCTTCTGAGGTTGTGGATAG
TAATCCATATAGGTATATTTTATTATTTCATCTTGTCTTTCTATCATTAA
TTTGTCTTATAATTTAGCATATTTTGGTGCACGTGCTACTGTACTTGATC
AGTTTTGTTTTTAGGAAGCTCTAGTCTACAGCTATTGGCTTTTATAGTTA
TAAATAAATTTTTGGTTAACGTGTATGTCTGTTTTCTTCAAAAGTTGTCT
TATGATTGTGACTATCTTCTGGGTTATGTCTGTTTATAACCTTAGTTAAA
AATCTATTATCAATCCTTACAACACTTTGGTTTTTTTTATAAATTGTGAT
TAGTTTTACTTCTTTAGTTGTTCTTTTTCTTCAATTACACTCGACTTTAA
AAATCATTAGATATATTAGCACAGTTTAGTGGCCAATATACCCAATATAC
TATAATCCTGTACAATTTTGTAATGGTTCAAATTTTCTCGCAAAACAGAA
TATCAGAGACTATATCAGGCTTATACTTTGTTAAAATTGTAAGAACAATC
GAGCTCTAGTTTTTTCATTTCAAGATAATCCACTTTTTTGTTCAAAAAAC
TCAACATGATTTTTTTTTAACTTTCAGTCGTTTGATGGCTCTGAAAAGGA
TGGGAATAGTTGATAATTATGAGGTAGGGCATCATTTAAAAAATTTATAC
GTCAAAAATAAAATGTATAAAAGGAACCAAGAAATTAAATTTTATATAAC
CTTGCTATACATTCTTTTCAGTTTTGATTATTTGTCATATTTGCAAGAAA
AATGTAGAAATGTATAAAATCGGAACACGAAATGATAAAAACGTTTTCTA
AGAAAGTGGGAAAATATTGATTTTAAGTCATGTGGCTTTTTTATGATCAT
ATTATGATTTAGTCAAACATACAGCAATGCACAAAGTTCATTTGTCTCGT
CTTTATCATTCCGTTCTTCACAATTTGGAGAATCCAGGTTTATTTTTGTG
TAGGATTAAGTTTCCTTCTGAAATTTAAAAAATTTTAATTTAAAGATCCA
AATTTACAAAAAGTTATTCCCCTCTTTTTCAGCGTATTCGTGATTACAGC
ATTGCAGTAGTTGGGATTGGAGGTGTGGGCAGTGTAACTTCAGAAATGTT
GACCAGGTGTGGTATAGGAAAGGTAACGTAATGTGTTTTTAGGTTAGATA
TTAAAAAATCAAATCAAATATTTAAAAACAAGCTCTCCTAGGATGATATA
GTGCAATACTTTTACTTAAAGGTTTTGTTTTTAAATAAGAGTGATCGTTT
GCTTATTCATCAATTTTAATTTACAAGCTATTTCACATTGGATTGACACG
GATGTGGAGCAAGATGATTAAAAAGAGGGAAAGAAAAACAGTTTTTATAT
CAGCACAAGATAACAATAGGCAGACACTGTCCTGATATGAAATATGTGTC
TCATATGAAACGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATTA
CATTTTNCCAGATGTCTTCTGAGGTTGTGGATAGTAATCCATATAGGTAT
ATTTTATTATTTCATCTTGTCTTTCTATCATTAATTTGTCTTATAATTTA
GCATATTTTGGTGCACGTGCTACTGTACTTGATCAGTTTTGTTTTTAGGA
AGCTCTAGTCTACAGCTATTGGCTTTTATAGTTATAAATAAATTTTTGGT
TAACGTGTATGTCTGTTTTCTTCAAAAGTTGTCTTATGATTGTGACTATC
TTCTGGGTTATGTCTGTTTATAACCTTAGTTAAAAATCTATTATCAATCC
TTACAACACTATGTTTTTTTTTATAAATTGTGATTAGTTTTACTTCTTTA
GTTGTTCTTTTTCTTCAATTACACTCGACTTTAAAAATCATTAGAGATAT
TAGCACAGTTTAGTGGCCAATATACCCAATATACTATAATCCTGTACAAT
TTTGTGATGGTTCAAATTTTCTCGCAAAAAGGAATATCAGAGACTATATC
AGGCTTATACTTTGTTAAAATTATAAGAACAATCGAGCTCTAGTTTTTTC
ATTTCAAGATAATCCACTTTTTTGTTCAAAAAACTCAACATAATTTTTTT
TTAACTTTCAGTCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATAA
TTATGAGGTAGGGCATCATTTAAAAAATTTATACGTCAAAAATAAAATGT
ATAAAAGGAACCAAGAAATTAAATTTTATATAACCTTGCTATACATTCTT
TTCAGTTTTGATTATTTGTCATATTTGCAAGAAAAATGTAGAAATGTATA
AAATCGGAACACGAAATGATAAAAACGTTTTCTAAGAAAGTGGGAAAATA
TTGATTTTAAGTCATGTGGCTTTTTTATGATCATATTATGATTTAGTCAA
ACATACAGCAATGCACAAAGTTCATTTGTCTCGTCTTTATCATTCCGTTC
TTCACAATTTGGAGAATCCAGGTTTATTTTTGTGTAGGATTAAGTTTCCT
TCTGAAATTATTGAAATTCTAATTTAAAGATCCAAATTTACAAAAAGTTA
TTCCCCTCTTTTTCAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGA
TTGGAGGTGTGGGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTATA
GGAAAGGTAACGTAATGTGTTTTTAGGTTAGATATTAAAAATCAAATATA
TAAAAACAGCTTTTAATTTACAAGCTATTTCACATTGGATTGGCACAGAT
GTGGAGCAAGATGATTAGAAAGAGGGGAAGAAAAACAGTTTTTATCAGCA
TAGTATAACAATAGGCAGACACTGTCTTGATTTGAAATATGTGTCTCATA
TGAAATGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATTACATTT
CGATGATAACATTTTAAAGGTCGTTTTCAGGTATTCAATCATCGAATTTT
AGATTTTTTACAATTTTAGATTTTATGACTGGGCTAATCAATAACAAATT
TAATCGAGGTGTTAAATTCTTTTTGGAAGCTCTCAATCCCCTAGACTTTG
ATAAATTTATTACTGATCCCAGCATTTCCAAAGAAATACTGAAAATACTC
TCAAGCTATACTTTAACTTTTCCTCTACTTTAGCTAATTATGTTTGATTA
TGACAAAGTAGAACTTGCAAATATGAACAGGTATGTCTGCTTTCTAATCA
AAATGCAAGGTATATACCCCTAGTCTCTTTCAATTTCTATCTTTTAAAGT
TAAGTATCCAAGGTTGCAGAAAATGGTTGCTATCAACTTTTTATCAGAGT
ATTTAACTTTTCTTCTGATTCTAGACTGTTTTTTCGACCTGATCAATCTG
GGATGAGTAAAGTTGACGCAGCTGTAAATACGTTAAGGTTTGGAATTTTT
TATTGAAGACCAAAATATTCTATCTGTACTCATGGGTAATCACCTCATGT
TGGTTAAAATTTTGGAGGTTTTTGCGTCTAACCAACAGCAAGCCGTTATG
AGGGCGCAATCAGTCCTGATTACTAATGATTCATTTGAAATGATCCTATA
TTTTTCGTATATTTTTCATGATTCAGCACTACTATAGGCTGCACGCAGCC
CCTCTGATATGTTTTGATATAGGGGCTGAGTGTCGTGTATGAAATCCTCC
TCCGAGAGTTACCCCCGTCTTTGTGTTTTTGAATTTTAGAAACTTGATTA
GCTTGTGATTTTCAATACCCGTCGCCGAAAAAAAAATCTCATCATAATTA
AACTTCTTATACGCCTCAAAGAGTTGAAAAACCTCTCTAAATAATCGAAA
TCTCATCGTTTGACTTTTAATAACAGTATTTTTCATTCCCTGTTTTTAGG
GATATAAACCCTGATGTAGAGTTCGAAGCACACAATTACAATATTACAAG
TGTAGATAATTTCAATCATTTCATGGGCAGAATAAAGTAAGATAAGTATT
GATTTATATTTATTTATTTATATGTTGTGTTTGTTTTAAAATTTTGTTTT
GAAACACCAAAAATGGTTTTTAGTAATTCTTTTCCTAGGCCCTTAAATCT
GGCTAAATGTTTTATCTGAAATGGTCAAAGTACACTTGACACGTTTTTTT
AGATCAGGTGGCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGT
TGATAATTTCGAAGCAAGAATGGCTATTAATACTGTAAGTAAGATCTATT
TTTCTGTTCTAGTTTTCCATCGTTTACCCCGTGAAATTAAATTAATTAAT
ATTTCTCGTGAATTCCCCTTTCAAAAGGTACTCTGGGCTTACAAGACTTC
TTCCGTCTCCAATATTTTATAATAGGAATAAAATTAAAATATTGTTTTTA
AGGCGTGTAATGAAATCGGTCAAGCATGGATGGAATCAGGGGTCAGTGAG
AATGCTGTATCAGGACATGTTCAAGTCATATTACCTGGTGAAACAGCTTG
TTTTGCTGTAAGTAGTCTATATGTCACCATCTGCACAGATATCTTATTTA
AAACACTAGATGGAGCCACTCTGTTGCTGGCTGAAGTAAAACAATGCACA
GTATTTAAAAGTAGACCACAGCAACTGTGCTATTAGCCAGGAGTTTGACC
ATCTACCCATTCCATGCTCTGTTTGCATTTCTCGACTTCAATTATTGTGA
AGTCGAACAAAAACATCTTTTTCTTAGCACTACTGAAAAAGGCCAGAAAA
GGCTCGATTTTGGTCAAGATAAGAACATACATGGCGCGAGGATCATCGCC
CCAGAACAAGTATCGCGTTTTCGACTAATTTAAGCCTTTTACCTGCTTTT
ACAAATATTTGGAGATATCGATGTATTTACTTGAACTGTCGTTTGATCGA
AGACAATTAGTCCAGAACTCATACCTAAAAAGCCTTGGGGCGTTTTATGC
CTAAATTACTTATCGGCCTTTTTACGCAGACCCTAATTTAGCGCCGGCCC
CTATTAGGCCAAAGCTAAATTTTTAGCCCGATTCCTTACGCCGCCCCCTA
TTACGCCAGTGACGAAAAAGTAACGCCATTAAGGACCGGATTAAGAAATG
GCTGATAAAATAATAATGATAACTTGTAATTTCGATTTTTAAAAGACAGT
TTATATTGATTGTCTTTGGGACATAATGGTGAATTCTTGATTTATTTTTA
CTAGTGTGCACCACCGTTAGTAGTGGCATCAAACATTGATGAGAAGACAT
TGAAGCGTGAAGGAGTATGTGCTGCTTCTTTACCCACCACCATGGGAATT
GTTGCTGGTTTCCTCGTACAAAATACACTAAAGTAAACAAGTTTTCATCT
TTATGTTTCTACTGTAAATTTTAAGTTGAATCGTAGCTTTCTAAAAGTTT
TTCACCTTTAAATATTACTCCCATAAGTCACTGCACGCCTACTAAAGTCT
GTTCACGATAAGTGTGCACTCTTTTTTCTTTTATCTATAACTTTTGAAGG
AATTCTTCAATCTTTATAAATTTGGTATTATTGGAAAGATATCAGTGAGT
GGAACAATTTGAAATAAAAAAATCTTTTAAAAAATTCTAAAAATGAAGAT
GAAAATGAAGAAGAAAAAAATGAAGATCTTATAGAAAAGTGCTATAACTG
TCATTTTCACTGAAGTGAATCCTTGATCATCGAACATTATCACTGAAAAA
ATTTCTCAAAAATAATTATTTTGTCAAAAGATATCAAACAAAGTTATAAG
CTGATTGACGTCTAAAAACGCTGTTTTCTGCTGTTTTCTGCTTTTTTGGG
GTCAATCACTTATTAACTTTGTATCATAACTTTATATTGAATGAATATTC
TAGTGAAATTTCTTCACACTGATAACCTCCTAAGATCAAAGAATCTCTCC
AGTGAAAATGAAAGTCAAAGCCCTTCTCTACAAGATCTTCATTTTTTTCT
TCTTCATTTTCATCCTCGTTTTTAGAATTTTTTCAAAGATTTTTTTATTT
CAAATTGTTTCACTCACTGATATCTTTCCAACAATACCAAATTTATAAAG
ATTGAAGAATTGCTTAAAAAGTTATAGGTTAAAGAAAAAAGAGTGCACAC
TTATCGTGAATAGACTTTAGACCTGTAGATTTGGAATGCCATGAGTTGAA
GTAATTATTTTTTCGCCATTCAATGACTTATACATCTACTTATTTTTGAA
TAATTGTAAAAAACCTTGGACCTCAAAGAATATTATTATAGTGTGTTTAT
ATTTTAATGACCTGTTTAGTTGCCTTGAGAATTTATTAGCAAATAATTAC
CATAAGCAGTACGGCACGATATCCTATATTTAAGGACCTTATATTTTTAG
AACCGTCCTTATATAGGGATGTCCTTATATTTAAGGACCTTTTTTCTACT
GGATCGATAAAAACCCGATCTAGTAAGCAAAGGTCCCTATTTATGGGGAC
GTCCTTAAATATAGGTCCTCTCCCGTACAGATAAGGGAACTAATTTAGGC
GAATTTGGCGAAATATTCAACCAAAATTGAAATAATTGCTGGCTCTGGCT
TTCAGTGTAAAGAAACTGATTTGCCATACCATTCGCCAAACTTAGTTCTC
GCCAAAAATAAAATTGCGTTTCTCATCAAAATGATTTCTTTTTAAAAATT
TCCCGGATACTGTTTTCCGATACCCTTCACACGTATTGATTTCTCTAAAA
TGGTGGCTTCTAGGCTACGCCATCTTCCTTCGTTTCGAGCGTAAAACTTC
TACTCTTCGGGATATGCTCGCAGCTCTTGTTTTGAATATTTCTCCGGATA
CATCGCATGCGCACTGAGGTTGTAAAGGAACAATCGAGAGTTTCGAAACC
TAAACCAATCAGCTGTGTTTCAAACATTCTTTTATTTGAAACCTCTATTG
ATAAACATCTTTTGTTAAAGTTTTCTATTATTTTTAAACCTAGTAATAAG
CGAATTTCCGGTGGGGGTCACTAGTTGCCTCCCATAGCAGTGCCTATAGA
CCAAGAGTAAGGCCTAAAAGCCTGTAGCTGTCTATTGTTTAGACTAGGTT
GCTTTTCAATCACAAGATAGTTATGATATATCATTGATTTTCAAATTCTT
GTTTGCATATCTTTTCAGATACTTACTGAAGTTCGGTACAGTATCATACT
ACTTAGGTTACAACGCAATGCAGGATTTCTTTCCAACAATGATTATGAAA
CCCAACCCGCATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTA
CCAGGTGAGCCAGGGCGACCCCCCCCCCCAAGGGCCCCCCCCCCCCCGTC
CCCTAGAAAGGAGGGTACTTAAAATCTTCCAAAAATAGGCCTTATCGAAG
TTTTTGATTTTTCTAAAAAAATCGATGCATTGTGGGATTTTTTCGAGTGT
ATTACAATAGAAATCTCTTAGGAATTCATCGAGGGAATTCTATTGTAATA
CACTTGAAACAATCCCACAATGCATTGCTTTTATAGAAAAATCAAGGTCT
ATTACTAAAAGGCAGGGTAAAGAACAAAACAAACTGTACCAAAGATTGTT
ATTTTCGAAAGTCTGTCCTTTTGGGATCAAAAAAAGCTGGAATGGATTTT
TTTGGGGGTAGGTACATTATGCACTAAGTGGAGATTTAAGTTGTAAATTT
ATTAAGGTATGGATGGATTTTTCAGGGAAACCCAACTACGCACAAAGGGG
AGTGTTTCTACGGAAACTGTAATTTTTCAACAGAATGCTATGATAGAAAA
GAAATTCATGATATGCACCATTGCAATGTCTTCCATTCCACCCAATAGCT
GATTGGTTGTAAGTGACGTATTGACTGATTTTACGTCACTTACAACCAAT
CAGCTGTTGGGTCCGTGATGTAATGTCAGAAGACATTGCAGTGGTGCATA
TCATGAATACCCCATTTCATTCACAGTCGAAATGAATCATGGGTAATCAG
GACCACCACGCTCCGATAAGGACTTTCAATTGGTCTAAATTTTAGGATGT
TTTTGTGTCTAGCCAACGAAAAGCTGTTATGGAGGCGCAATCATTCCTGA
TTACCCATGATTCATTTAGACTGTAAAATGGCTTAGAGAGGCCTTTAATA
TATCCTTTTCTAACTTTTAAACATAACTTTTTTATTCTTTACTTTACCTC
ACAGGAGAAGTTAGCAAAACAACCGAAGGAAGAAGGCGTTAAAGAAACTG
AAGAAGAAGAAATTGTTCACGAAGATAATGAATGGGGTATGTAAAGTCTA
CTTCACTAGCAGGGAACAATAGCAAAGACTGTAATACTTTCGTTATAGTT
TGTATTTGAATAACATTCTTCTGATCGTTGAAAATATTTTTGTAAGACCT
TTGAAGTAAACCATTTTTCCTATGTCTGTAAATATTAATCTGTGAGTTCC
CACGCGGTTTATTTTAAACATGGCAAACTGCTTCTTTGTCTGTACACCCA
GTATCTACAGCTAATTCCAAAATTCATTGCCGTAGGGGATAAACGTACTC
CGTACTACGAAGCGATAAACGTGAGATACACTCTGGTACATAGTAACTGC
TTCTATGCTTGGTGTTTAATAGGATTTTTAATGGTATTAAAAATCTTTCC
GAAGATAGTTAAAGAAGACTCTTTCTCCCTGGATTGCTCTACCTACCCTT
AATCATTCTCTTAGTTGCTAAGCATCAAGCAGAGAGGCGTCAAAGTACCA
TTTTGGGAATCTTTGGTATGATCCGGCTGGGGGTCGAACCCACAACCTTG
CGCACCGTAGCCGGGTGCTCTACCACTGCACTACGGTCTGAATAAACTGA
AACATATTTAATGTACCTTTTACTTGCACTTTTTAATCACCATAGGTATT
TCATTGGTCGACGAGTCATCCGATTTACGGGAGGACACACAACTACAAGA
ATTGACTACTGGACTTTCGTACGCATATACTAAACCTGCAGTGAGTCCTT
TCTATGTATTAATGCTGACAAGCTTGATAAGATACTACCATTTTTAATAA
TTTATTTTAAAAGCGAAATGCTTTGTCAAGAGACACAATTCAGTTTTTTT
TCTAACAAGCAAGTTTTAAAGTGTATGAAATGATAAACAAAATTTAAACC
TTTCCATATTATGTAACCTTTTTCAACGGAAAAAAGGAAAAAAGGCCAAA
GCCAAAATCTCCAACTAAAATCCAATTAAAAATGTCGATGATGTTATTAG
CCCTGGGTTCGAGGGTGGGTTCTTTGTTTTGTAAAATTCATGATATGTAC
CATTACAATGTCTTCCAAGTACCCATTAGCTGATTGGTTGAAAGTGACGT
AAAAAGACTAAATTGATTGATTTTACGTCACTTACAACCAATCAGCTGTT
GGGTCTTTAATGTAATGTAAGAAGACATTGCAATGGTGCATATTATGAAT
AGGGACCTTTAGCATCTAGGACGGCAGGATTGAACAAAAATGCCCTTGGG
ATTGATATGTGGATCGCAGCTAGATTCTTANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AACTTTTTTATTCTTTACTTTACCTCACAGGAGAAGTTAGCAACACAACC
GAAGGAAGAAGGCGTTAAAGAAACTGAAGAAGAAGAAATTGTTCACGAAG
ATAATGAATGGGGTATGTAAAGTCTACTTCACTAGCAGGGAACAATAGCA
AAGACTGTAATACTTTCGTTATAGTTTGTATTTGAATAACATTCTTCTGA
TCGTTGAAAATATTTTTGTAAGACCTTTGAAGTAAACCATTTTTCCTATG
TCTGTAAATATTAATCTGTGAGTTCCCACGCGGTTTATTTTAAACATGGC
AAACTGCTTCTTTGTCTGTACACCCAGTATCTACAGCTAATTCCAAAATT
CATTGCCGTAGGGGATAAACGTACTCCGTACTACGAAGCGATAAACGTGA
GATACACTCTGGTACATAGTAACTGCTTCTATGCTTGGTGTTTAATAGGA
TTTTTAATGGTATTAAAAATCTTTCCGAAGATAGTTAAAGAAGACTCTTT
CTCCCTGGATTGCTCTACCTACCCTTAATCATTCTCTTAGTTGCTAAGCA
TCAAGCAGAGAGGCGTCAAAGTACCATTTTGGGAATCTTTGGTATGATCC
GGCTGGGGGTCGAACCCACAACCTTGCGCACCGTAGCCGGGTGCTCTACC
ACTGCACTACGGTCTGAATAAACTGAAACATATTTAATGTACCTTTTACT
TGCACTTTTTAATCACCATAGGTATTTCATTGGTCGACGAGTCATCCGAT
TTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTCGTACGC
ATATACTAAACCTGCAGTGAGTCCTTTCTATGTATTAATGCTGACAAGCT
TGATAAGATACTACCATTTTTAATAATTTATTTTAAAAGCGAAATGCTTT
GTCAAGAGACACAATTCAGTTTTTTTTCTAACAAGCAAGTTTTAAAGTGT
ATGAAATGATAAACAAAATTTAAACCTTTCCATATTATGTAACCTTTTTC
AACGGAAAAAAGGAAAAAAGGCCAAAGCCAAAATCTCCAACTAAAATCCA
ATTAAAAATGTCGATGATGTTATTAGCCCTGGGTTCGAGGGTGGGTTCTT
TGTTTTGTAAAATTCATGATATCTACCATTGCAATGTCTTCCAAGTACCC
ATTAGCTGATTGGTTAAAAGTGACGTAAAAAGACGAAATTGATTGATTTT
ACGTCACTTACAACCAATCAGCTGTTGGGTCTTTAATGTAATGTAAGAAG
ACATTGCAATGGTGCATATTATGAATAGGGACCTTTAGCATCTAGGACGG
CAGGATTGAACAAAAATGCCCTTGGGATTGATATGTGGATCGCAGCTAGA
TTCTATTCTTTTCATATCAATTTTCTCATGAGAATAGTGAATTTTAATAG
GGTAATTTTCAAATCTCAAGACGATATGAAAATTCTTTTCTGACGTCGTC
TTTGAGAAGATGGTAAAGGAAGAGTGCAATAGTTTTTAATGATATGAATC
ACTAGAGAATTATAACGTGATCTACAAAAAAATTGACTATATTTCAAATT
ATAGTTAATTCTAGATAAAATCGGATAAAATTTGCCGTTTGATTTAAGAT
TTACTTCACGTCCCTAAAGGTCCCTAATATTGTGTCCGTTACAGACGGAA
ATTTGATCCGAAGATCTTATATTTTCGGACAGAGCTTGTTTTTTCGGAAA
ATGAAGTTAATTCCAGACTTCTTTTAAGATGTCTTACTTTAAAATATCAA
CCGAACTCTAAAGCAAAAACTAGAGCGTACATTTCTATGGAAATTTGGAA
AGTTTTTCTGGGTAGTGAGAAAGTTGAGTAGCATTACAGTACCTTTTATA
TAAGTTCTATAAGTTCTTTCTTTATCCCATAGGAAACAACAGAAGAACAG
ACTGAACCAGCCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAG
TCTAGAGGATTTAATGAGACAAATGAAACAAATTTAGTTCTTTTTTAGAT
TTAATTTACGAAAAAATCTTCTTTTTTAATTTTTTTAAGGGGGTTGGGTC
TCTTCTTTATTTTTTTTTGCAAAAATCAACAGAAGCGAGGCGTGATCTTC
TAGCTTTGAACAATTCATACCTTTTTCGCCCGGGCTTTTTCGTCAAAAAG
TCTTTGAAATCCGACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGCT
TTAATAATTATTGAATTTGAATTTTTGAACCAAATTTTTAAATTTCTTTT
TATTTTTTATGTACTTAAGTGGTATAAATTTTATTTATTATACAATACTG
AACAATGAAATTAAAACAGAAAATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007592XLOC_007592Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013597-exon-sc0000170-1575043694:60921..61032TCONS_00013597-exon-sc0000170-1575043694:60921..61032Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:60310..60355TCONS_00013597-exon-sc0000170-1575043694:60310..60355Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:58327..58416TCONS_00013597-exon-sc0000170-1575043694:58327..58416Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:57803..57849TCONS_00013597-exon-sc0000170-1575043694:57803..57849Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:57596..57658TCONS_00013597-exon-sc0000170-1575043694:57596..57658Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:57047..57133TCONS_00013597-exon-sc0000170-1575043694:57047..57133Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:56799..56880TCONS_00013597-exon-sc0000170-1575043694:56799..56880Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:56526..56630TCONS_00013597-exon-sc0000170-1575043694:56526..56630Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:55701..55828TCONS_00013597-exon-sc0000170-1575043694:55701..55828Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:53779..53914TCONS_00013597-exon-sc0000170-1575043694:53779..53914Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:52797..52878TCONS_00013597-exon-sc0000170-1575043694:52797..52878Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:50617..50711TCONS_00013597-exon-sc0000170-1575043694:50617..50711Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1575043694:49107..49550TCONS_00013597-exon-sc0000170-1575043694:49107..49550Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:60921..61032TCONS_00013597-exon-sc0000170-1510915933:60921..61032Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:60310..60355TCONS_00013597-exon-sc0000170-1510915933:60310..60355Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:58327..58416TCONS_00013597-exon-sc0000170-1510915933:58327..58416Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:57803..57849TCONS_00013597-exon-sc0000170-1510915933:57803..57849Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:57596..57658TCONS_00013597-exon-sc0000170-1510915933:57596..57658Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:57047..57133TCONS_00013597-exon-sc0000170-1510915933:57047..57133Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:56799..56880TCONS_00013597-exon-sc0000170-1510915933:56799..56880Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:56526..56630TCONS_00013597-exon-sc0000170-1510915933:56526..56630Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:55701..55828TCONS_00013597-exon-sc0000170-1510915933:55701..55828Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:53779..53914TCONS_00013597-exon-sc0000170-1510915933:53779..53914Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:52797..52878TCONS_00013597-exon-sc0000170-1510915933:52797..52878Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:50617..50711TCONS_00013597-exon-sc0000170-1510915933:50617..50711Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1510915933:49107..49550TCONS_00013597-exon-sc0000170-1510915933:49107..49550Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:60921..61032TCONS_00013597-exon-sc0000170-1491911889:60921..61032Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:60310..60355TCONS_00013597-exon-sc0000170-1491911889:60310..60355Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:58327..58416TCONS_00013597-exon-sc0000170-1491911889:58327..58416Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:57803..57849TCONS_00013597-exon-sc0000170-1491911889:57803..57849Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:57596..57658TCONS_00013597-exon-sc0000170-1491911889:57596..57658Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:57047..57133TCONS_00013597-exon-sc0000170-1491911889:57047..57133Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:56799..56880TCONS_00013597-exon-sc0000170-1491911889:56799..56880Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:56526..56630TCONS_00013597-exon-sc0000170-1491911889:56526..56630Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:55701..55828TCONS_00013597-exon-sc0000170-1491911889:55701..55828Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:53779..53914TCONS_00013597-exon-sc0000170-1491911889:53779..53914Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:52797..52878TCONS_00013597-exon-sc0000170-1491911889:52797..52878Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:50617..50711TCONS_00013597-exon-sc0000170-1491911889:50617..50711Clytia hemisphaericaexon
TCONS_00013597-exon-sc0000170-1491911889:49107..49550TCONS_00013597-exon-sc0000170-1491911889:49107..49550Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000170supercontigsc0000170:49107..61032 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	2.11404e-08	0	0.000456606	3.28695e-05	0.860685	0.000424504	0.0604452	0.0487786	0.270574	0.00640785	0.0195645	0.00412557	0	0	0.132413	0	0	0	0	0	0	0	0.00885332	1.46593	0	0	0	0
Blast
[Close]
BLAST of TCONS_00013597 vs. Swiss-Prot (Human)
Match: UBA5 (Ubiquitin-like modifier-activating enzyme 5 OS=Homo sapiens GN=UBA5 PE=1 SV=1)

HSP 1 Score: 468.389 bits (1204), Expect = 1.743e-161
Identity = 226/288 (78.47%), Postives = 261/288 (90.62%), Query Frame = 3 
Query:   60 REKIAQMSSEVVDSNPYSRLMALKRMGIVDNYERIRDYXXXXXXXXXXXXXTSEMLTRCGIGKLIMFDYDKVELANMNRLFFRPDQSGMSKVDAAVNTLRDINPDVEFEAHNYNITSVDNFNHFMGRIKSGGLN-GKPVDLVLSCVDNFEARMAINTACNEIGQAWMESGVSENAVSGHVQVILPGETACFACAPPLVVASNIDEKTLKREGVCAASLPTTMGIVAGFLVQNTLKYLLKFGTVSYYLGYNAMQDFFPTMIMKPNPHCDESFCLKRQQAYQEKLAKQPK 920
            R +I +MSSEVVDSNPYSRLMALKRMGIV +YE+IR +++A+VG+GGVGSVT+EMLTRCGIGKL++FDYDKVELANMNRLFF+P Q+G+SKV AA +TLR+INPDV FE HNYNIT+V+NF HFM RI +GGL  GKPVDLVLSCVDNFEARM INTACNE+GQ WMESGVSENAVSGH+Q+I+PGE+ACFACAPPLVVA+NIDEKTLKREGVCAASLPTTMG+VAG LVQN LK+LL FGTVS+YLGYNAMQDFFPTM MKPNP CD+  C K+Q+ Y++K+A  PK
Sbjct:   37 RVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPK 324
The following BLAST results are available for this feature:
BLAST of TCONS_00013597 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBA51.743e-16178.47Ubiquitin-like modifier-activating enzyme 5 OS=Hom... [more]
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