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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013652 ID=TCONS_00013652|Name=TCONS_00013652|organism=Clytia hemisphaerica|type=transcript|length=1198bp
NNTTTAATAGgtttttgttaattgttttattattttcttgtattcttttt
gttattcatttgcctactcaaaaatcaaaaagactgtcacagagtttaaa
aaataaacaatatggaaaaatatggaatgaaaaaatatggaaGTGCATTG
CAAGTGAATTGATTCATCTATATATGTATGCATTTTGGTTGATATCATAA
GGATAACTATTGAAACGTCGAATAGTGGTATGAGTGGatatatatttcta
ttttggaATTATTACAATTGATGTAATCGCTTATCCTGATGCAGCTTAAA
TTCATTGAATCTCAAAATATCCTAAATCGTCGTCATTTTCAGTCTTTATT
AACAAATAGTCGAATGGCTTCGAACATTTTCATTACAATCACCAACATTC
GATACAATCGCCAACATCGATACTGCATAATATGCGCTTAAAGTCAATGT
ATCATATTATGGTTTCATCCGATTTTCACAATATGCTGTATTTGCTCAAc
ggaaacataaaattttattattttcagcatttttataGTAAATCAACTGT
CGCGTTCAGCCACCAACCgaccattgataatacaaaaataGCAATTCTTA
TCGCGATTTCCATGATTCCACTATGTATGACTTCTTTGAAGTACGTATCC
AAACTTGACCTCAATCTTCGAAATGTTTGGTGATTTGTTCCTGTTGGAAA
AAAACGATTTGGTATGTAAACTTTGTGTGGTTTGATTATGTGACATTTAT
GTAAGCGAAACactgaaaactaatttttgttattttggaaGCCGGAAATC
CACCGGATGTAAAAAAAAGCCAATTTTGCACAATTCTTGTAATTTTGTAA
ATTGCTATGAACTATGAACTATCGAAATTTTGGAATTACGAATACttaga
aatataatttttagattcattAAATCGAAACTCAAGTTACCCGTTTTTGC
CCCTGTACCAACCTGTATTTTCCTGTtcatttaaaaacgaaagcagaTTT
TCGGCTAtaatgaaagaaaacttttctacGAATTGcttggaatctcgaat
cttgtCTTTTCAAGTTCAAGATATTGGATAATTTCGACCGGAAATGACGT
AAAATTTTACCCTATCTTTCGttctaaactcactcaaaataGGTTTATCT
TATTAATTTTCTGCATTCatcttcaagttttaattgtcGTTTTCCAAG Run BLAST on NCBI transcript from alignment at sc0000170:496388..497585 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013652 ID=TCONS_00013652|Name=TCONS_00013652|organism=Clytia hemisphaerica|type=transcript|length=1198bp|location=Sequence derived from alignment at sc0000170:496388..497585 (Clytia hemisphaerica)
CTTGGAAAACgacaattaaaacttgaagatGAATGCAGAAAATTAATAAG
ATAAACCtattttgagtgagtttagaaCGAAAGATAGGGTAAAATTTTAC
GTCATTTCCGGTCGAAATTATCCAATATCTTGAACTTGAAAAGacaagat
tcgagattccaagCAATTCgtagaaaagttttctttcattaTAGCCGAAA
AtctgctttcgtttttaaatgaACAGGAAAATACAGGTTGGTACAGGGGC
AAAAACGGGTAACTTGAGTTTCGATTTaatgaatctaaaaattatatttc
taaGTATTCGTAATTCCAAAATTTCGATAGTTCATAGTTCATAGCAATTT
ACAAAATTACAAGAATTGTGCAAAATTGGCTTTTTTTTACATCCGGTGGA
TTTCCGGCttccaaaataacaaaaattagttttcagtGTTTCGCTTACAT
AAATGTCACATAATCAAACCACACAAAGTTTACATACCAAATCGTTTTTT
TCCAACAGGAACAAATCACCAAACATTTCGAAGATTGAGGTCAAGTTTGG
ATACGTACTTCAAAGAAGTCATACATAGTGGAATCATGGAAATCGCGATA
AGAATTGCtatttttgtattatcaatggtcGGTTGGTGGCTGAACGCGAC
AGTTGATTTACtataaaaatgctgaaaataataaaattttatgtttccgT
TGAGCAAATACAGCATATTGTGAAAATCGGATGAAACCATAATATGATAC
ATTGACTTTAAGCGCATATTATGCAGTATCGATGTTGGCGATTGTATCGA
ATGTTGGTGATTGTAATGAAAATGTTCGAAGCCATTCGACTATTTGTTAA
TAAAGACTGAAAATGACGACGATTTAGGATATTTTGAGATTCAATGAATT
TAAGCTGCATCAGGATAAGCGATTACATCAATTGTAATAATtccaaaata
gaaatatatatCCACTCATACCACTATTCGACGTTTCAATAGTTATCCTT
ATGATATCAACCAAAATGCATACATATATAGATGAATCAATTCACTTGCA
ATGCACttccatattttttcattccatatttttccatattgtttattttt
taaactctgtgacagtctttttgatttttgagtaggcaaatgaataacaa
aaagaatacaagaaaataataaaacaattaacaaaaacCTATTAAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013652-exon-sc0000170-1491911889:496388..497585 | TCONS_00013652-exon-sc0000170-1491911889:496388..497585 | Clytia hemisphaerica | exon |
| TCONS_00013652-exon-sc0000170-1510915933:496388..497585 | TCONS_00013652-exon-sc0000170-1510915933:496388..497585 | Clytia hemisphaerica | exon |
| TCONS_00013652-exon-sc0000170-1575043694:496388..497585 | TCONS_00013652-exon-sc0000170-1575043694:496388..497585 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000170 | supercontig | sc0000170:496388..497585 . |
Blast
The following BLAST results are available for this feature:
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