TCONS_00013724 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013724
Unique NameTCONS_00013724
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length369

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013724 ID=TCONS_00013724|Name=TCONS_00013724|organism=Clytia hemisphaerica|type=transcript|length=369bp
CTAAAGCAAAAAGTCGAATCAACGATAAAACTACATTTACATTAcgttaa
aacaaaacaaaaataaaatcttattattaTCACAAACTAAAAtcgattga
aataaaaaagcataattcttttaaaatatatattgttttttttaattgcg
GAAAACCCACATGTGCAAGAAAGGGGCTCTCAAAACATTCGCGAAACAAA
AGTCTAGATATAGGAAAGTGCCCTCAAAAGTCGGTCGATTGTTACTAGCT
TCCGTATTTATTGCTATCTTTTCAAAAGATCGCTTAACATCCAAATCAAT
CTGGCTGGTCAAATCTCGAAATTATGATGCGATTGTGCTAATCAAAGATC
Agaaaaatgatttgaattt
Run BLAST on NCBI

transcript from alignment at sc0000171:355637..356065-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013724 ID=TCONS_00013724|Name=TCONS_00013724|organism=Clytia hemisphaerica|type=transcript|length=429bp|location=Sequence derived from alignment at sc0000171:355637..356065- (Clytia hemisphaerica)
CTAAAGCAAAAAGTCGAATCAACGATAAAACTACATTTACATTACGTTAN
ACAAAGACAGCTAAAGCAAAAAGTCGAATCAACGATAAAACTACATTTAC
ATTACGTTAAAACAAAACAAAAATAAAATCTTATTATTATCACAAACTAA
AATCGATTGAAATAAAAAAGCATAATTCTTTTAAAATATATATTGTTTTT
TTTAATTGCGGAAAACCCACATGTGCAAGAAAGGGGCTCTCAAAACATTC
GCGAAACAAAAGTCTAGATATAGGAAAGTGCCCTCAAAAGTCGGTCGATT
GTTACTAGCTTCCGTATTTATTGCTATCTTTTCAAAAGATCGCTTAACAT
CCAAATCAATCTGGCTGGTCAAATCTCGAAATTATGATGCGATTGTGCTA
ATCAAAGATCAGAAAAATGATTTGAATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007660XLOC_007660Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013724-exon-sc0000171-1575043694:356026..356065TCONS_00013724-exon-sc0000171-1575043694:356026..356065Clytia hemisphaericaexon
TCONS_00013724-exon-sc0000171-1575043694:355637..355965TCONS_00013724-exon-sc0000171-1575043694:355637..355965Clytia hemisphaericaexon
TCONS_00013724-exon-sc0000171-1510915933:356026..356065TCONS_00013724-exon-sc0000171-1510915933:356026..356065Clytia hemisphaericaexon
TCONS_00013724-exon-sc0000171-1510915933:355637..355965TCONS_00013724-exon-sc0000171-1510915933:355637..355965Clytia hemisphaericaexon
TCONS_00013724-exon-sc0000171-1491911889:356026..356065TCONS_00013724-exon-sc0000171-1491911889:356026..356065Clytia hemisphaericaexon
TCONS_00013724-exon-sc0000171-1491911889:355637..355965TCONS_00013724-exon-sc0000171-1491911889:355637..355965Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:355637..356065 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013724 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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