TCONS_00013833 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00013833
Unique Name	TCONS_00013833
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3000

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000174:286345..300395+

transcript sequence

>TCONS_00013833 ID=TCONS_00013833|Name=TCONS_00013833|organism=Clytia hemisphaerica|type=transcript|length=3000bp
GCTGAAAATCGGAAAAGATACTCCGCTGAAAAAGTGAACAAATTAATCAA
GGCAGCCAATTATATCTAAAATATTTATAGACTGAAAACCTTACTTTACC
TTATTTACCGTCACGAAAGGAACGTTTTTGGATTGCAGGTGTCAACGGAC
AGGATTAAAAGCGgaagcgaaaaaataaaaataaattagagttCCGTTGA
TTACGTCAATGGTTGGCACTAGAAGGAAAGATCTTCAAAGAGTCAATCGC
AATCCAGGAATAAACTTTGTATTGAAGTGTCTTTTCACCTTGATACTACT
TTAGAAAAAATTGACAGAATTTATTGTCTTCCACGGATGGAAGATTTGAA
TGTAGTGCTAAGCAACAATCAAGTAAATTAGAGACGATACAACCTAATTA
ACTCCGAAAAGAAAACACTGTAATAATTGTCGGGAAAAAgagaaattaac
aaaaagaaGCACAATATAATTTTCAACAAATCCGTCTATTGTTAAAGCAA
TTGATTTCTATTGTTAGAAGAATTGATTTCCATTATTGCTGTTGTTGATT
TCATTATGTTGACGGAGAATAGACTTTTGTTTCGTCACCATCAACCGCAA
CAACGAAGAACTGTTGGAAAAATTCTTCGATTGTATAATCACAGGCGAAG
AGATTCAATAACATTTGAGAATACAATCTTATCACCTCTCAAACGAAGCA
TGTCTGAGAATGGTTACCTCAACGCTGAAACTGCTGTTCAGAATCTGACC
ATCACCACATCTGCCAACACCACCACTAAGCCACAATTTAAACGTCAGAA
ATCGCTAGATTTAGAAGAAGATCAGCAACGATCAGTTTCGCCATCATCAT
CACCAAAGATGTTCTCATCACCAGAAGGTAGCGTCAATACAAACAGACGT
GATTCAAATGCCAGTTCTGATTCACAGAAAAGTGCCAAGAAACCAGCATC
TTTGGATGAAATACAAGACCTGTATAGTGCTTTGCAAGACTTGGTCAAAA
CGAACGTGAGTACAACACCGTTGCCAGAACGACGTACCAAGATGTTGTCT
CCATCACCAATGAGCAGCCCTAGGTTGAGTGATCGTTCATTAACAGTACC
TGAGAAAACACTCAGAAAAATCTCCTCAAAAATCACACCGTCCTCTTCTT
TTGAGAAAGAACAAAGCGAAGGAAGTCCAACGCCACGTTTGAAACATCGA
AGAGGAGTTTCAACAGGTACCATGGATTCTGTCATTAATTTAATGCGAAT
TTCACCGTTCCCAGGACGTAAATTTTCACACGATGTCAATACAACGAGTC
AAAAAGACAGTAAAAAATTATCCACTTCTAAAACCCCGAATATGGTCTCC
TCCAAGGCCGGTAAGAAAGAACGCAATAGTGGCGATCATGGAAAACGTTG
GAAAGGCTCCAAATTATTTCACCGATTGCGATCGAAAAGTAACGCCGAAT
TATCCGACAACGACGACAAATTATCAACCGACGACGAGGAATGTGTTCGA
GAAAAAAACCGCCGTATGTCCGAAGCCGATGCATTGAAATTAAAGCGTAA
CCGAGATAGTGGGTTAACACCACCGCAACGTAAAAGTTTACAAGAGGAGA
AAAACAAGGATATCGAGAATTTAGTTGCATCTTTAACCATCAAGAGTTCT
GATTCCAATTTGTTACAGACACCGAAAGAGACCTTTACGAACCCTTTGAA
TGAGTTAAATCAACTTGAGAGCTGGTTCGAAAAAGCATCCGTTGCACTAA
ACCCTAACGTAGGACGTTATATCTTAAATGATGAATCGAGTAGCGACGCC
GCTTCACCAAACGTACGTGCTAACCGATTCCGTAAGAAGAACGGTAACAA
ACGTACTGGTCCGGGAATACGTAGAGCAAACTCTAACGTTGGAACGTCGC
ACCGTAATAAGGAGGAACGACGCGCCAAAAGGAATAAAATGACGTCCAAA
AGTTTCGATGCAACCGGATTagcgcacgctaaaagtacacCTGATTTATC
CAAAACAGGTGTTGAATCAGAAGATATTTTAAACGATACAGGAATATCGT
ATAAAGTTTTAGGACAATTAAATCATTTCACTGAAAATCGAGTGCGCGAT
TTAACACCGAAAGACAATAAGAAAGAATCGAAGAGAGTTTCTTTAGATGC
TAATTCAGTTAAACGATTACCTGACACGCCTTTATTCTATGTACCTGGGG
ACGAAGAGAATGGAAGACTAAGCCCAAGTGAGttatcaaaaacatttaaa
agacAGAAATCAGAAGGCTCAATGTTTTACACCgaggaagaaaacaaaaa
cgcTAAAAACTTATTATCTCCACCTGCTGAGTCAGCAATTTCATACGAAA
AGCCTCAAAGAAGTGAATCCTTATCAACTCCTAATAAATCGAATAACAAA
AGATCGAAcaacaataaaataaagaacaaaacaaGACCCAAATCAATGTT
TGACTATTTTGATCAAGAAATCTTAGGGGAGGATCCTAACGATGAGGTTT
GGTCGTCCGAAGAAAAAGACATTGTACAACAGAACAATTTTGATAATAAC
GCTAATTTTTGTCGAGCCAAAATCATGAATAATGCACACCGACTATCTTT
ATGTGATTTGACCAAAACGACTGTGGTTCAAGAGAAAACTTTGTGGGACA
AGTTCAGGAAAGTGGCAGCAAGCAAGAAAGCTAAAGCTTtgATGGCTTGA
ATCTCAACCGAATCCAATCTCTAACTGATCGAAAGGTATGGACAAAGATG
ACCAAAATTTATGTATAAAGATGTTTAAATATAATTATGTTAATTTATAT
GAGTAATATATCATTTTTACACCCTTTTTTATTCCATTTTTGTACAGAAT
TTATGATAAGAAATTGAGAAAGTTGAGAATCTAATCGTCAAAAATCCTGA
ATAAGTTATTGCCCAAAAAATCCTGATTTAAATCATCAATTCCTTAAAGG
GTAAACATTGCGTGAACCACGtttcattaaagagaacaattaaaataacg

Run BLAST on NCBI

transcript from alignment at sc0000174:286345..300395+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00013833 ID=TCONS_00013833|Name=TCONS_00013833|organism=Clytia hemisphaerica|type=transcript|length=14051bp|location=Sequence derived from alignment at sc0000174:286345..300395+ (Clytia hemisphaerica)
GCTGAAAATCGGAAAAGATACTCCGCTGAAAAAGTGAACAAATTAATCAA
GGCAGCCAATTATATCTAAAATATTTATAGACTGAAAACCTTACTTTACC
TTATTTACCGTCACGAAAGGAACGTTTTTGGATTGCAGGTGTCAACGGAC
AGGATTAAAAGCGgaagcgaaaaaataaaaataaattagagttCCGTTGA
TTACGTCAATGGTTGGCACTAGAAGGAAAGATCTTCAAAGAGTCAATCGC
AATCCAGGAATAAACTTTGTATTGAAGTGTCTTTTCACCTTGATACTACT
TTAGAAAAAATTGACAGAATTTATTGTCTTCCACGGATGGAAGATTTGAA
TGTAGTGCTAAGCAACAATCAAGTAAATTAGAGACGATACAACCTAATTA
ACTCCGAAAAGAAAACACTGTAATAATTGTCGGGAAAAAgagaaattaac
aaaaagaaGCACAATATAATTTTCAACAAATCCGTCTATTGTTAAAGCAA
TTGATTTCTATTGTTAGAAGAATTGATTTCCATTATTGCTGTTGTTGATT
TCATTATGTTGACGGAGAATAGACTTTTGTTTCGTCACCATCAACCGCAA
CAACGAAGAACTGTTGGAAAAATTCTTCGATTGTATAATCACAGGCGAAG
AGGTaattatatgaaaaataattttctcttttgatgcgtgttgttttgtt
ttgtgtcAAAGATGTGGCaagattttttcgtttttcttctaTAATTTGAG
CAAAGTAGTTCTAAAAcagttgatgattttttttaaagacatgataaatt
tttcaaattattttaacgTTTGTGAAATTGGCAATGATAAAGATTTTTGc
gttgaattctattgtttttcattATCTTTCGAAATAGCACAAAATTCATA
TCATTCATGTTGGCTTTCTTCACTTGAACAATGTTTACATATTGTTGCAA
GGCCCCTTGCAAAATGTTGAAGAAAAAACCATAGAACTGCAATGGAGGGG
GATCATATAGCTTTTATAATTTGCCCGATCAAGGGTTTTGAATTACCGTA
GATTTATGCATGGAAGTCCTTAGAACATTGGTCAAAAACATTATTCTATT
AATTTAAGATTATACCGTTTGATTATGTAGTGCTATTACTATATTTAGGA
TTTATCCTTGAGCGCCTTGAGAGTACGTGTCTGCAAAATAGAAAGATCTA
ATCAATCCGACAAACCAAACAACATTGCCAAAACCTTCGAAAAGAGGCGT
ATACAAAAAAGGTGGGACTTTAAGTATAGCGAGTAATGATTGAGCATCTG
TATATAACAAAACTGTATAGTCTTTGGTAACCAAGAgctagctggcacac
aacgtcggtTTAACGTTCGTCCAACGTTATAGGTATTCTCACTGAACGTT
GAATTAAGGGTATCTAACACTGTCAAATATCACCATTCTGTGATATTTAA
TTAGTTGACATATTTTTAGTTGATATCGTTAGAAAAAATCACAAAGACCT
TCGTGCCGTTGATTTTGTAAGAGACTTCACTGCCGTCTATAAAAAGTACC
GTTTATTTAGCTTGGAAAGCACCCTCTTTGAAAGAATGAGTGGAATGTAT
ACTTATTGTTCATCTTCAAATAGCAGGATGAGCAAAATTATGgctcattt
tcaaaacaagccGCCCAGTAATGAATGAAAGCGGTCTTCATTTTAACAAA
ATCATTACTTTGTATAAAGTACCTGACTGTCAAATCTGGTCAATCAATAT
CGAATTTGAAAATTAATGACCAATTGAAGCTATAATGACAGAAACCTTCG
TCAAACAACCAAATTATGTTACAAATCTATTGTTTTTGAGAAGATTTACA
TGTAAGCCATAATTACGTATAAttaattttggccaatttcgaTCAATTCA
ATTTTGGTTTTCAAGATATCAATTTGTTGATACGGCTGGTTTGGTTAGAA
TGATCAAATTTGTTAttgaattttcttgattttcgtttttaaaaaattgt
ctggttgttttttttggttttgcaATATTGTCTTTAGTGAGTTTATCTAT
CGGAGCGATATCGAGGgcaagtcgatagttgatgtgcGGCTCTTTATCGC
ccttgctcacctaaacagacgacaatattttggtgtttttaccgtcttTG
AGCAAAGTGGTCGGcgatttttttgctttataCTATCTCTacttcgattt
atctcgaatacataaactcgcttgtATACAGTCTGTGACAAGAGGAGGTT
GTTGTCGATTcttcaattgaaattcaattggAATATGATTCgctgaaatt
tcattttgctGAGCCGTAGATAGATCTAAATAGATTTATGAGCATACATT
AAACTTTGCAGACTTGTAGCAGAATTGTAAAACCGATCTGCAAGTCAAAT
GCATTTCATTGGTATGATCTGATTTGAAAGATACAATTATGAATTCTCAT
ATCACTAACAGTCTCCATACCCTTTTACTTCAAGGACCCTTGCTTGAAGT
TTAAATTGAGGAAGGAAATTAAGAAGTAGGGTCCATGCTTTATTCAGTGC
ATCGTTAGTCAGAGAAGTGCTTGAATGATACCGGTATTGACGGTAACTCC
TTTTTATAACTCCGTTTTGTTCGTATTATAAAATCGTGTTaattttgaag
acttttttgTTAATTCTAAATGCATGAAAACTTGGTTGAAACAGAAATTG
TCTATGTTTGACCGCATTTGAATCCCCGATTCCTGAAAATAAAGCATTAA
TCGGATAAATTGCATTCTGCTAAGCTATTCGTCATAACTGAGCATTGTTT
CCCTTCTCGCAGACCCattgggaacccttcccactagaaaaaatggccaa
aatatcgtccccagtggaaaattatatgaatattctggctcgaaaacaat
tgacttcaaatccccagttataaaaaacatgggatAATCAATCCCCATAG
AGTTTTCGTCCGTTATTTtcacccccactggctgaaaaaatcttaccggg
tctgtgagaaggggatgttttttttttaaaaaatttctgtaTATTGCATG
TCTACACGCCAAGCAAACTTTGTTATGTTTTGCCCGGAAGATGACACCTG
TTAAGAACGACAATTTACAACGTTTtcatataagaaaaaaatctataaaa
cacATAAAAAATACAATCTCTTATGAAATCACACCCAAATACTTTCAAAA
TGCTGAACATTTTTGAAGCATATTTTTATTTAGCCTTGAAACcaaatgtt
tagttttttgacgcgaccttataaaaaatgtgtgactggtttaaaaatat
cattttctttgtctttcaCTAATGACATACTATTAAAAGAAGAATGGCGG
TGTTGTTTCCAAGCATCATGAGAAAATAATCTTCCTGGTACCGAAATGGT
TTTTTAATGAAGGAAAATTCTTTCTTGATTGAAAAATTCGGATGTAGATC
GAACCGTTGAGGAGgtttatgttttttataagaactgttttataagaaca
cgacaCGAGGCTCGGtattcaaaacttaaaaacaaatttggaGAAACCTA
TAAGCCTTGCTATTTTAGAAATTACTAAGGAAGTACTAATTCTGATTGAT
TTTGTTTGGTACTTTTAAACATTAAAGCGTTTTAAGTAAATTAAACGATT
AAACAGCAGCCAAGatatttactggttcttataaaaaatattgttctgtt
gtttatttttttcacagtTGGTTTACTGCGCCTACACTGACAATCAATTC
CTCTAACTCAAATTTTCCAATCTTCGGATCTGATTTATTGCTTCCTTTAA
GAGCTTTTGTACGGTACAGGATTTCTAAACTTCATTATGATTATGTTGTG
TTTAAAAGTAAATGTCAGATGTTAGAAATAGTTGTTGGCACAAGAGtcag
aaatctaaaaatataaGATTTCTCATTGATATGCTCATAGATACGGCTGT
AAACAAGTGTAAATCACTTTGCAAAGTGCACTTGAACTTGTTAAAAACTT
TCCCTTCCTTTTTGCATAACTATTATACACTTCTGTCTGaagttttggca
tttttcaagtttcaccaatatgaaaatattcaaaggcAGAGACTCCTGAA
TCACCATATACGGTATATCACAACAAGATTTTGCACTCcatttttgtgtg
tttttatatCTACAGGCTGTGAGAGTTTTGAGTACCCTAAAATTCGCTGC
TATATCGTAACTTCTATTGTTCATCACGCGTGAGAAAATAAAACTGCCTC
TTGAAGTGATACAAGACCACCACTGCTATTTTGGAGTGCTCTTTGGTTTG
GTATTATAGAAAAGAATCTTTTGTCAGTAGTATAAAGCGTCCACAAGTCT
ATCAAATCCTCAAAAGACAGACACTATAAAAATTTGAAGTCGTTTCCAGG
TCACTTCTTGAGCAATATTTTGCTAATGACATCGATAATAATACAGTCCA
TTCGCTTTAATTCTGCAATTTCTTGCTAGCATGTGGAAACCACACCAGTG
TACAATCTCCATCGAAATACATTAAGAATTTGGGCTATTTcctcattttt
cgaaatttgaagttcAGGCGTGAAAGTCGCTTAGGGGCTAACTGTCAAAT
GTAATCGAATTTAAATTTATGGGTAgagtttatagacttccaggctatat
tctgagcctgtttgaactaattttgaacttttggatcctcagatcctaag
gtccgaagtcctaagtctagcgttaaaactcaccTAAGTTACAGCGCTTc
caaatgaaattttccttttttctcaaatattacgacctcGATTGTGACAT
GACAAGTTCCCTTCAAGGTGGTTTCGAAGCGAAAGAGAGTGCACAACTTA
AAGCAAATAGAAATTACTATGACCAGTCTCTGACATTGAAACCAATCTGT
TTCGTCCACTTGAAGATACCAAACGTCATGAAGTAATACTTCCTTCCTTT
TTACCACAAATTACTCGTGCAAACTTATCACCAATGAAAATCAGATCAAG
AAACTGTGATGTTCAAGAGTTTAACAAGCAATGACTAATCAACGAGTAAA
TATAACGTTCATTTTGATCATCAATTTATACACATCGCACCAAATTGGTG
TTGCAATTTTTGTCATCTCagagaagaagtcattgcattgatttttcgcg
cgcgttctattttgtgccaatcaaattgcgtcacgcattcgaaagattcg
aaaatgttgcaatcaaaatcaaaacaaaaaatttcatttgagaCTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATTTTTCTTGTCttc
tttttgacatattttcgaacgtttacccccgtcttttctgACGTTCGATT
CTTTGACGTCAAAACACGGAAACCCCATTTGTCGCGATGACAAATATCTT
TGTCTCAGCATTTTCCTGTGAACTCTAAATCTCCACTAGAGAGGGGCCAA
AATGACAATATGAGAAGGACGTTAAGGTTGTTTTTAATCTATTTCCAACA
TGGAAAACGTGTCCCTTTTTTCCTAGATGCCTTAATCACTGAAAATAAAG
GCTTGTCGGTGAGATAAATAAGGTCTGGACCAACTAAGCTATTTCTAAAG
TTAGCCATAGTGCAATGTCTTCActaaaaagttgattttcaaaaatctaa
ccATTTTTCTCTAGACAAAACAGGAAGACCTTaccaaatttctaaaataa
acaCAAGAATACCATAGAAATGACTAGCAAATTTCTTGGCAAAAAATACC
GAAATATACATCAACAAAAATGTTGAAGGTGCTTGAACACCTACCTCCTG
TCCTTAAGGTTTCTATTTATATTATGACGTAACAACTCTTGGATAAGTGG
TTAAGGTGTAAGAGTTAGTATCAACTTAGCTTGTGTCATctcctttttat
aaaaattggcatTGGAAGGTCATAAACATTAGTTGGCATGTCTGTTTAGG
ATCTTTAATTCTTTTTACGCTTTGTTTCTTTATATAAGCATAACTATTAT
AAGCGTATCAACTAGGACTCAAAATAATAGTTTTTAACATTATGCAGAGC
CTAAAAAACGTGTCTATTGGAAGTTTGTATGTAGATATTTTTAAGGAACA
AGCAGAAAATCTTATTGGGCGCCCTGGGCTTCAATAAATTATCTAGAAGC
ATTTTAAAACCTTCTGGAGGGGTCTCAGAAGCTCATATACAGTTCGTAGT
TTGAGctcaatttcttttgttttttcttcatgAACTTTTCCTTAcaattt
tcaatagtttgaGTTTGCAGCCTTCATAGTCATGGTCGAGAAGTTtttga
aattagaaattttaaataccaaaattttagCTGGCACTTTTTTCCCCACT
TTTGGACCGGGAATAGTTAAACAGTGCGACTAATCAGTCCCCCGGACaaa
ttaaagtttttatgaGAAGAAAATCAGTTCAAAATGTTCtaacaaaaaag
tgaaagataCCCGCAAATGTTTTGATAAATCAAGtaggattttttttgtt
ttcttgaacCCTGAATGTTTTGATAATGTATGAGATCATCTTTTCTCACG
ATCATTTGTTTTTGAACCCCCTAACTTCTTTTTTCATATATAAAGGGAAT
GGAGAATCAAAGACATATATCAGTTCATCATGTTAATGTTTCGATTCTGA
TTTTGTTACAAATGATATCGCGTTTTGGGTCATTTCACTTGGTTGGAAGT
CAAGTTATAACTTGAAATAATTCTATTTGCTAAATTGATcgattgaattt
tctttttttgcgaaATCTATATTGCTCTTGGGTCATCAAATAAAGCAAAA
GTCTGACTGAATTGTATCAGAGAGTTCAAATATTCAAGTGTTAGATTGGA
TGTTTTTGTCAGTTCTTGATTTCGATTTAAAGAAGAACGGTTATGTATTG
ATTACTGTTGCGAAAAGCTGCGTATTTAAATAGGCTCGAGTTCGAGTCAA
TTAGAGTGACGTCAAATGTCTGAAGAGATTGCATTGATGCGCTCAGATAT
TCAGGCGTTATTTGACTCGGATAAACACAAGCCTTGCTCTTTTGTACATG
TCGCAGGTGTTGGATGATTTTTAAAGTTCTTCTGGCTAGTGTTATTAGGA
TTTTAATAAACAATTACATTCTTCCCGGCTCGATGTTTTGCTCGACGGTT
TTGTAACGCTATCAGTTACCTTCAAGTTATCATCAAGTTTTGTTATCAGC
AACCTCGAGGTGTTTATGGGGAAAGAGATGCATTGTCAATCTCTAATTTC
TTATGTAATGTTGAgtcacaattttcaaaaagagcatgaaaaaaaacaga
atacAGGAAAGTAGTGCTAAAGTAAGTTAGTAGTNTTATCAGCAACCTCG
AGGTGTTTGTGGGGAAAGAGATGCATTGTCAATCTCTAATTTCTTATGTA
ATGTTGAgtcacaattttcaaaaagagcatgaaaaaaaacagaatacAGG
AAAATAGTGCTAAAGTAAGGGAAAAGTACCGCTAAAGGGAAGATTCTTCG
AATTTCAATGCGAGGGTTGTGTCATAAGATGCAAAATTATTAAACTACTA
ACAAGGTCATAAACTAAAGGTGACTTTTTGATTCCACCAATCAAATGAAA
GATTTGTCAATAATGAACCAATCATAGCCACGTATTGGTTAATACTAATA
TCGTCATTAAAATCAGCCATTAATTACGCAATTACTCAAAAGCggtaaaa
agattcgaaaattCCCACTTAAATCAGGTTGAAACTTTAATGTCGTCATT
TTCCTTTATAAGAATAGTTTATTAAGAGAATGAGGCTTGATTTTGACCAA
ACTTGAAGACAAAAGCCTTTTAACTTTTAGAAATGATCAAAGACAGGATT
GAAgattttatgtattttcaaaGTTCTCACATAATATAGAACATAATTCA
AAAAGACTACAAGAACACTTTAGCCTGAATATCCCGAAAGATTAAGAACA
tctaataattaaaaaaataaacttatTCTTATGAAGGAGGAGAGTATGTA
TAACTGGTTAATCAACTATTGTGGTTAATTTGAATTTTCGAATAATTGCG
AAAGCAGTCCCACTAAATGGGTACGTATTGAAATTAAGTAGCAATGAAGT
CATGCATTGTATTCTTGTTCTTTTTGTTCTAAAGAAAGCTCACTTTGTGA
CGAAAAGGATATGAAAATTTGGAACAcagttgaattatttttttgaaacg
aTCAAATTGGATGATAGTAGAAATAttgaaactttgaaaacagGTGTTAT
TATTTGAAACatggtttttgttttgttagagTTGATTATGTGCGTGTTAA
TGTGTGACGAAATGATGAAAAACTGGAATAAAaatccaaaagttttgaaa
taatatATACAAGTTCACAAGTTGATATAACACATACgcgttatttttta
taagaacaaccaaaAAGCCTTCAGATCGTGTTctgaactttttgagtttt
aagtctaaaaatgttcttaacatgttcttattttgaccatttcgtgaata
tttttgaccattttcctaagaaatagggtgtttttgattccacaaagcct
taaaatgttcttaacttgttcttaacattttggccagcgaagccttacgt
tcttatatagtttgttcttataaaaagaaaacgtgtacgtAATAAACATA
AATAATATGATGCTACTGGTTTTGTTGGcgaaaagaatatttttcttcgt
ttgtttatttgtttgagGTGATGACGTTGTATGATAAGGTTGGTCTGAAG
TTGTTCTTATTGTCAGATTTATGGTTTTTATGGTCAGATTAAAGGGGCGT
TTTAATACCGTATCATCTCTaagaatttaaaataaattttagaggAAAAT
TGCAGACGATGCTTTTTTATTGCCTtggatatacacgttttttttattat
aagaacgtcaaaaattttcgaagccttcggatgttcttagttttttggat
tttaagcctaaaaatgttcttaaaacgttcttattttcagaattttttga
gcattttgatgtaatttcttaagaaaatgcatgtttttaagtctccaaag
ccttagaatgttcttagaatgttcttaaatttttgggcctcgaagcctta
tgttcttatatagtttgttcttataaaaaaaaaacgtgtaatagtTATGA
TCCACTTATTGTAATGATAAACTTGCTTAGTAAGGGATTTAAATAGGTGC
TGGTTAATATGGTGTATCAAATATTCTTTGACCTCTTCCAGGGGAGGTAT
ATAGGAAAGAGTTTCATCACAAGCAGAGTCGCATCTAGACAACTACATAA
GTCAGACAGGGTCTAACTCATTCAATATAGGTTAGTGCTTAAGGTCAgaa
ctaaaaatattttgctctAATGACGTGGAAGATTAAtcttttaatgaatt
tttttgttttcaatcaaaatttcaacCCGAAAGAAGTGAGATTTTACTAT
TTAACATAAAcagttttagtcaaatttttgtccCTATGTTCCTATTTTTA
AACAACAGCAAACTTCAGAAGTGTGACGTTATGTTtagttttgtttcaaa
attatcCCCATTAAAGTTTATTTTAAACTCTGTTTTCATTTGGCCCTTAT
TTCTGACCCTAACTTTCTCCTGACGATATCATTTAAAGTTTTGACGCAGT
TAATTTATTTAAAGAACAACTAAAACCTTAATTTGAGTTTAGTCTACAAT
ACTTCAAACCTTGACCGTCTTTCAGGTCTCAAATGATAGCCTTAGGAATA
AACAGTCTTAagattcaaatttcttttacgAGACTTTCAGGACAATCTCT
CAAAACAAGATAAAATAAATGGTTGAGAGACCAAGCCGAAATAAGCCATC
AAAAAATATCCTCAATTTGAAAATCACAGCAaagttgtttacttttttcc
taTTTTGGTTTTCTAAATAACGGATAACTTATCCCCAATCCGGAAATTCC
CGACTAGCGGATCCGGAGGTGCTAATCGCTCTAGAAAGTCTCCTTGattg
ttgtttttgaattgggcgctatatttttcaaaaagctcaTCATGGGGGAT
CAACATTCAAATTGATACTGTATATTATCGCTATCTTGACGATATTCTTG
ATTCGCTTTTGAAGCTTCTTTGATCCTCTTTGAGATAGAATAAAACGCGT
TTCAGATTTTTCTCTCTTGTTGccagatgaaatattttgaaagtcaaaaa
ttcttgaACTCTAATCGATCgattgctgatttttttgttgataatCGATA
TCTATAAGagtgtcttttttgaaaagagctttTTCTTCGTGTTTGgcgat
tttatttattttagtgtATTTCATGTTTGGATAGCTTGGTATAAGGTTCA
AAAGATGTTAGAGCTACAAACGTTTTTCAAACCCTCAGTCACGATGCTTG
TGTTTTCGTAATCGATATAGAAGCATTcgtcattaaaaaaaattttcttc
aaaaaatttgaaaaataatattattctttctttttcatcatCAGATTCAA
TAACATTTGAGAATACAATCTTATCACCTCTCAAACGAAGCATGTCTGAG
AATGGTTACCTCAACGCTGAAACTGCTGTTCAGAATCTGACCATCACCAC
ATCTGCCAACACCACCACTAAGCCACAATTTAAACGTCAGAAATCGCTAG
ATTTAGAAGAAGATCAGCAACGATCAGTTTCGCCATCATCATCACCAAAG
ATGTTCTCATCACCAGAAGGTAGCGTCAATACAAACAGACGTGATTCAAA
TGCCAGTTCTGATTCACAGAAAAGTGCCAAGAAACCAGCATCTTTGGATG
AAATACAAGACCTGTATAGTGCTTTGCAAGACTTGGTCAAAACGAACGTG
AGTACAACACCGTTGCCAGAACGACGTACCAAGATGTTGTCTCCATCACC
AATGAGCAGCCCTAGGTTGAGTGATCGTTCATTAACAGTACCTGAGAAAA
CACTCAGAAAAATCTCCTCAAAAATCACACCGTCCTCTTCTTTTGAGAAA
GAACAAAGCGAAGGAAGTCCAACGCCACGTTTGAAACATCGAAGAGGAGT
TTCAACAGGTACCATGGATTCTGTCATTAATTTAATGCGAATTTCACCGT
TCCCAGGACGTAAATTTTCACACGATGTCAATACAACGAGTCAAAAAGAC
AGTAAAAAATTATCCACTTCTAAAACCCCGAATATGGTCTCCTCCAAGGC
CGGTAAGAAAGAACGCAATAGTGGCGATCATGGAAAACGTTGGAAAGGCT
CCAAATTATTTCACCGATTGCGATCGAAAAGTAACGCCGAATTATCCGAC
AACGACGACAAATTATCAACCGACGACGAGGAATGTGTTCGAGAAAAAAA
CCGCCGTATGTCCGAAGCCGATGCATTGAAATTAAAGCGTAACCGAGATA
GTGGGTTAACACCACCGCAACGTAAAAGTTTACAAGAGGAGAAAAACAAG
GATATCGAGAATTTAGTTGCATCTTTAACCATCAAGAGTTCTGATTCCAA
TTTGTTACAGACACCGAAAGAGACCTTTACGAACCCTTTGAATGAGTTAA
ATCAACTTGAGAGCTGGTTCGAAAAAGCATCCGTTGCACTAAACCCTAAC
GTAGGACGTTATATCTTAAATGATGAATCGAGTAGCGACGCCGCTTCACC
AAACGTACGTGCTAACCGATTCCGTAAGAAGAACGGTAACAAACGTACTG
GTCCGGGAATACGTAGAGCAAACTCTAACGTTGGAACGTCGCACCGTAAT
AAGGAGGAACGACGCGCCAAAAGGAATAAAATGACGTCCAAAAGTTTCGA
TGCAACCGGATTagcgcacgctaaaagtacacCTGATTTATCCAAAACAG
GTGTTGAATCAGAAGATATTTTAAACGATACAGGAATATCGTATAAAGTT
TTAGGACAATTAAATCATTTCACTGAAAATCGAGTGCGCGATTTAACACC
GAAAGACAATAAGAAAGAATCGAAGAGAGTTTCTTTAGATGCTAATTCAG
TTAAACGATTACCTGACACGCCTTTATTCTATGTACCTGGGGACGAAGAG
AATGGAAGACTAAGCCCAAGTGAGttatcaaaaacatttaaaagacAGAA
ATCAGAAGGCTCAATGTTTTACACCgaggaagaaaacaaaaacgcTAAAA
ACTTATTATCTCCACCTGCTGAGTCAGCAATTTCATACGAAAAGCCTCAA
AGAAGTGAATCCTTATCAACTCCTAATAAATCGAATAACAAAAGATCGAA
caacaataaaataaagaacaaaacaaGACCCAAATCAATGTTTGACTATT
TTGATCAAGAAATCTTAGGGGAGGATCCTAACGATGAGGTTTGGTCGTCC
GAAGAAAAAGACATTGTACAACAGAACAATTTTGATAATAACGCTAATTT
TTGTCGAGCCAAAATCATGAATAATGCACACCGACTATCTTTATGTGATT
TGACCAAAACGACTGTGGTTCAAGAGAAAACTTTGTGGGACAAGTTCAGG
AAAGTGGCAGCAAGCAAGAAAGCTAAAGCTTGTAAGTATCTTTTGAAATT
ACGTTTCTTCTTCTTGTCAAAAGTTTTTGTCTGAAATCTTTAAGCTAGCC
ATGAGTTCGAATGAAATCTTTTCAATCATCAGCTTCCATTTGGGATTTAT
CTAGTTCCGGTGTAGAACATGTTTAGCTTCACAAAACTTTgcataaaaat
tctaaaaattattcttattaattaactaaaaatcaaatttcaagatttct
tgAAACATTTCTTTAACAGGttcgatttttcattttctagtgATGGCTTG
AATCTCAACCGAATCCAATCTCTAACTGATCGAAAGGTATGGACAAAGAT
GACCAAAATTTATGTATAAAGATGTTTAAATATAATTATGTTAATTTATA
TGAGTAATATATCATTTTTACACCCTTTTTTATTCCATTTTTGTACAGAA
TTTATGATAAGAAATTGAGAAAGTTGAGAATCTAATCGTCAAAAATCCTG
AATAAGTTATTGCCCAAAAAATCCTGATTTAAATCATCAATTCCTTAAAG
GGTAAACATTGCGTGAACCACGtttcattaaagagaacaattaaaataac
g

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_007732	XLOC_007732	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00013833-exon-sc0000174-1491911889:286345..286996	TCONS_00013833-exon-sc0000174-1491911889:286345..286996	Clytia hemisphaerica	exon
TCONS_00013833-exon-sc0000174-1510915933:286345..286996	TCONS_00013833-exon-sc0000174-1510915933:286345..286996	Clytia hemisphaerica	exon
TCONS_00013833-exon-sc0000174-1575043694:286345..286996	TCONS_00013833-exon-sc0000174-1575043694:286345..286996	Clytia hemisphaerica	exon
TCONS_00013833-exon-sc0000174-1491911889:297789..299825	TCONS_00013833-exon-sc0000174-1491911889:297789..299825	Clytia hemisphaerica	exon
TCONS_00013833-exon-sc0000174-1510915933:297789..299825	TCONS_00013833-exon-sc0000174-1510915933:297789..299825	Clytia hemisphaerica	exon
TCONS_00013833-exon-sc0000174-1575043694:297789..299825	TCONS_00013833-exon-sc0000174-1575043694:297789..299825	Clytia hemisphaerica	exon
TCONS_00013833-exon-sc0000174-1491911889:300085..300395	TCONS_00013833-exon-sc0000174-1491911889:300085..300395	Clytia hemisphaerica	exon
TCONS_00013833-exon-sc0000174-1510915933:300085..300395	TCONS_00013833-exon-sc0000174-1510915933:300085..300395	Clytia hemisphaerica	exon
TCONS_00013833-exon-sc0000174-1575043694:300085..300395	TCONS_00013833-exon-sc0000174-1575043694:300085..300395	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000174	supercontig	sc0000174:286345..300395 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.0954948	0.0754605	0.707099	0.334867	0.0463373	0.449445	0	0.0846106	2.06085	1.97887	1.74162	0.932127	0.0426845	0.0467421	0.829495	0.661804	0	0	0.0678948	0	0	0	0.259202	0.510689	0.0660062	0.54486

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00013833 vs. Swiss-Prot (Human)

BLAST of TCONS_00013833 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

You are here

TCONS_00013833 (transcript) - C. hemisphaerica