TCONS_00013869 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013869
Unique NameTCONS_00013869
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length946

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013869 ID=TCONS_00013869|Name=TCONS_00013869|organism=Clytia hemisphaerica|type=transcript|length=946bp
TAGACAGCAGCCTTAACTAAAGCCACCTATGATAATAACAAATCAGATGG
CAACCAACACGAGAAGCCAATCCGAATATAATCTAATCAAAGAAAACATC
AGAAAAGGTAGAACAATTTCAGAGCACTCAAGCAAGATTTGAAGATAATA
AACTACAAAGATGGAACTTTTAAAAAACATGggaaaaaaaacatcaacag
CGACCAACGAGATTGCTAAACCAACAACCAGTATGGCCAAACAGATGTCT
TCAGCCGATGATATTGCAGCTTGGTATGAAGGAGTTCAACTATATGATAT
CAACAGGATTGATGAAGCACTCGaagtcttcaaaaatacaaaacagaATG
CAAAGATGTTATTGAATATTGGGTGTtgttatttgagaaaaaatgacTTG
CAGAGTGCTTCAGAGAATTATGAAAAAGCAGTCAAAAGCGACCCACACTC
AGCATTAGGATTCTTTTTCCTTGGACTGACAAATTATTTTCAAGACAAGT
ATCGAGATGCActatcaaactttcaaaaatcaCAAGAACTGTTGCGAGGA
AACAAATTTGTGGATTATCGACAACTTGGTTTTAAATTCCAACTATATTC
TTGTGAGATTTACACCAATGAAGCAGCAACGCATCACCATTTGGGTAACG
ATGAAAGCGCACAAGCATCACTCAAACAAGCTTTAGAGATGAAAGCTGAC
AAAAGACATGAAAGAATTATGGTAGATATTCAAAAGATCGCTAAAGGAAA
GCCCATTCAGCTTTTCTATCCTCCacaaagtgaaatatttcgacCAGCCA
AAGCACTCGTCGCAAATGTAGAAAAGAAAGATTATCTTGGGGCTTCTAAA
GTTATTTCTACAGATAGCGAGGAAGATTGTTATGCATGTTTCTCTGGAAT
TAAAGATAAAGTCATCGAACAAAAGGTTTGTTGCTAGGATCTTCGG
Run BLAST on NCBI

transcript from alignment at sc0000174:182413..191328-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013869 ID=TCONS_00013869|Name=TCONS_00013869|organism=Clytia hemisphaerica|type=transcript|length=8916bp|location=Sequence derived from alignment at sc0000174:182413..191328- (Clytia hemisphaerica)
TAGACAGCAGCCTTAACTAAAGCCACCTATGATAATAACAAATCAGATGG
CAACCAACACGAGAAGCCAATCCGAATATAATCTAATCAAAGGTATGTAT
TGTAATCATTGTAGATATCAAAAGTGGGAGTTAAAATTATTTGTTTTACA
AAGAGAAGGTAGGAAGAGAATTCACTTAATTCTATTAACAATATATCCTC
TATGTCCTCCGTGAATAGTGTTTGATTAACTTTAGTGCTTTATCTCTAAG
AACCTGTCTACTAAATACTTAATTTAGTCCTAGAACTCGACGAGAGAACT
ACATAAGAAACTCTTTGAAGCTAAACTGTTATTTTGAACTGGCATTATAT
GGTTTTGTTTCCTGTCAACTTAAGATGCAGTCACTGCTGGCTGCAATTAG
TCCTTTTGCCACAAAACAAGAAGAAATTTATAAGCAATTAAAAGTCTAAT
TATTCTTATAACAAATTCTACATTAATGAATGATAATTAAGTTTCGTGCT
ATTATGACCATAAGTCCCTGCTTTTTAATCATCAAGCATCTAAATGGTTC
TAAACTTTCTGTACATTAAATGTTTTGGTGGAATCAGAGCTTACCTGTGT
AACTTTGGAGCAGTTTAGACTTTTCTTGATTTTAAAAGATGGTGATTGCA
GGTTCGAGCCTGGGATGAGATTTTAGTTAGGACAAGCACCGTCATTTGCT
TATTTAAGGTTAATTATCGTTATCTGTAACGTTTAAATATGCCTTGCTTC
TGTATAAACAATCAAGATATCTCTATTACTCGAATGCATGCCTTGCATTT
TGGTAAAGCAATTCCTATACTAACGATTATCAGTTTCTTAGTCTCAATCA
CAGACCTCTTTCGAAATACAGTGGAGTCTCTTTAACTGGGACCTCTATAA
CTCGAATTTCTCCTCAACTCGAACAAGTTTACTATTCCCTTCAGCTAACA
ATGCCTTATAAACCTTACTCCACATCTTGAAATTTTTTTAATTTTGTGAA
TAAATTTGTGTTCCAATTTCTAAACGGTGCTGTAACACAGGGATTTTAGA
AGGTGCTATATACACAGGAAAAAAATTTCGATTTCCAAGTTTGGAAATTT
CAAGATTTCTTAGTTGGAAAATAGATAAAATCCAATGGAAAATCCAACCT
GGAAACTTGGGACACTCTCCAAGGATGGAATCTTTGCATTTTCCATGGCT
TGGAATTTTCAAAAATCCAGGTTGAAAAAAGCCACAATCCAAAGTAAACA
AACTTGGAATTTTCAAAAATCTAGGTTGAATAAAGCCAAAATCCAAGCTA
AAAAAGGTTGGAATTTTCAAAAATCCAGGTTGAAAAAAGCCAAAATCCAA
AAAGAAATGACAGAGATGTGGAAAAAGAGATCTTAAACAAGGTTTTTGTT
TTTGTGAACAGTCACTCGCGAGCCTCAGCTCGATGGCTCCCGGTCAATCT
CTCGTTATTGTTCGCACAGATACGTGGTTGATCTTAGATCACCCACACAG
CTCAGCAGGGCACCATTTGAAACTATGACACAAGTACCCTATGTGCTTCA
TTGTGCGAACTCACTGCGATTGACCGAGGCCGCTCCGAAGGGACGCCTCA
CCTGACGGAAACTTACAGCTTGACTGCTCACATTATAGCCTAATATCTAG
GTTAGCTATATATCACGACAGTTCTAGGCGAAAAATCGCTTGTGGTGTTC
TCAAAGGACATGTGCAGAAAATGGTACAAAAACGTAATTTCCACATGGGT
TTTTACCGTTTTCCAAACTGCTTGGAGAAAAACACATTTTCGATGCAAAA
AGACTAGTTTTGCAAGGAGGAGTCTCAATTTCACAAAAATGTAATTTCCA
CATGAATTTTTTACGTTTTCCAAACTGTTTCGAGAAACACACATTTCCAA
CGCAAAAAGACTAGTTTTTCAATCTGAAATCTTAATCTTAAAAAAAATCA
TATTTCCAACATCGATTTTTGACGCTTTTTTCATCTCCCAATCTGTTTGG
AAAAATAAAAATGTCCCACCCAAAAAGTCATCTTTTCCAACCAGCCTTGG
AAAATTGTCATTTCGACATTGCTTTTTTTTCACTTGATTTTTCAAGGACA
TTGGTTTATTCTACAAAACCTATGGGTAATTTACGTTTTCCAAATCAGCT
TAAGATAATCGCTCAAATTTCCAGCCTTCAATTATTAAATCAAATTTTCC
AACCCAAAAATATTGAATTTTCAACCTTGGAAATAGAAATTTTTCCTGTG
ATATATGGGCCCTCCCGGGGGTTCGCGTGAATGCGTGAATGGACATTTTC
GGTTGCGTGAATGTGTGAAAATTAAAAAGAAATGCGTGAATGCGTCAATT
GAAAAGACTTGCGTGAACGTGAAAATCCACTTTTTGATTGCGTGAATGCG
TGAATCTGGGCTATTTTGTGAATCGAGGGTCCACTGGGGAGCCTCATATA
TGGAAGTATTATGTCTTTTCTTAAGAGTGACCGTAGCATAAAGCCTATTC
ATTCAACTATGAACCGGAAAGCTGTGGGTTTAACGCGTGCGTGTTTGAGT
TATACAGACGTCACTGTATTTCTCATTGGTTTTTCATAGCAATTTATTTT
TTTCCGTATAGAAATGATATTTTGATAATATTTTGCCGACTTTTATGGTA
TAGCATTTCAGAACATACCATAACTGTTTTTCTATTCCTACTATTTCAAT
GATAGAAAACATCAGAAAAGGTAGAACAATTTCAGAGCACTCAAGCAAGA
TTTGAAGATAATAAACTACAAAGATGGAACTTTTAAAAAACATGGGAAAA
AAAACATCAACAGCGGTAAGATAAACTCAACTTAATAACATATGAAACGG
CTAAGCAAACGTTAACTTAACGTTAACTTAACGTCTTTTTCATGAATTAC
GTTAGGAACATCACTCGCCTCGTCTTGAAATTATTGCCATGGTGATTAAA
TCCCGCCAGCGGGTTTTATTAAGACTACTTCCTATATTCATAAAAAATCA
TTTAATGTCTCAAGACGAGACCCATGGTAATTGTTTGAATACGAGACAAG
TGATGTTTGTGACGTAATTCATGAAAAGGTCTATTCTAATCTCTTAAAGA
GAAAAATCAAGGGAGAAATATCCAACAAACGGCGCGTCGCTACCTTCGGG
TAGACAGCAAAGGAAATGGTGCCTTCGGCTGCAAACTTACTCAACTTATA
CTCATCTCCTTTAGACCAACGAGATTGCTAAACCAACAACCAGTATGGCC
AAACAGATGTCTTCAGCCGATGATATTGCAGCTTGGTATGAAGGAGTTCA
ACTATATGATATCAACAGGATTGATGAAGCACTCGAAGTCTTCAAAAATA
CAAAACAGAATGCAAAGATGTTATTGAATATTGGGTGTTGTTATTTGAGA
AAAAATGACTTGCAGAGTGCTTCAGAGGTATAGCTATTACCGAGTTTATG
TATCGGAGGATATCGAGGGCGACAGTGAGTGAAATCGATACAAAACAAAG
TTGATAGTTGATGTGTAGCTCTATATCGCCTTTGCTCACCTAAACAGACG
ACTGTATTTTGGTGTTTTTACTGTCGTCGAGCAAAGTGGACGGTGATTTC
GGAGACATGTCAACTTTGCTTTATACCGTCTCCCTCGATTTATCTCGAAT
GCATAACCTCGCTATTACATCCCTGTTGCAAAGTCTTGGTGGAAATTTTC
GCCATGGGATAAGATTTCTATCGAAATCCCAATTGGAATCTAAATTTTAT
TGTCCTAAGCTAAAATCATCCAGTGGGGATCGTTTTGTTTGTTGCAATTT
TTTACATTGACTTCAATTGGAAAGTCTATTACCCAGTGGGGTTGAGAATG
TAGGGTATGTTTTCCACCGGGGACGAGATTTCGGTCAAATTTTCTTTTGG
GGCGCCACCGGGTCCGTGACACAGGGGTTTGCTATTTATTCTCTTCGAAC
TAAAAGCTATGAAACCTGCTTTTCTGTTGGAACAAGCTTATGATACTTTT
TGAACTTAATTTTTTACTATTCCCTATCATTTAGAATTATGAAAAAGCAG
TCAAAAGCGACCCACACTCAGCATTAGGATTCTTTTTCCTTGGACTGACA
AATTATTTTCAAGACAAGTAAGTTCAATATGATAATCATAACTAACTTAT
TGGAACTAATTTTCACGGGAACTAATATTCACGTTCGAAAAAAAAATAAA
TCGGAAAAATTGCATTTCATGGGTTTTGATTTTCGCGGTTTTGCCCTTTT
GTGGACAAATTTCTTTCATTTTCCTAGAGATTTTTCAAATGTTTCGATAA
AATTGGAAAAAATTGTATTTCGCGGGTTCAAATTTTTGTGGTTTTGCCAA
AAAACCGCTAAAATTAATTCCCGCGAAAATTAGTTCCAATAAGGGCAAAC
TTGAAAAAACCATCAAAACGTACTTGAAAGCCCATGTTGATTATTGTCGA
GTTGAAGACTACTCTTAGGTGCCAAATAAACGGGGGGGGGTTCGAATAAA
TGGGGGGGTTGGAAAAAATTTTGAAATTAAATAAACGGGGGGACCTAATT
ACCGGGGGGGTTGGAAAATGGACCTTTAAAGACCCTAAAAAGGGTCAAAA
TAGACTAAATTTAGGCTTTTTAGAGTAAAACAAGGAATTTTCCTTTTTGA
AGCNGAAAAAAATCGAAAAATTAACAAGCGGGGGGGACCGTTTATTTGGC
ACCTAAGAGTAAGACAATTCTATCGTTAGAAAAAGTCTAGAAAGAAATAG
TTTTCATAACATGATAATTTTAAAACAGATAAGCTGTCCGAGATAATGAA
AATTTCGGGCCTAGCTAGTAAGAGGTGGTGGAGGTGTCCTCTCAAACTCC
GTATCACTGCTTATTTTTCGGTATATGTATTTCCACTACCATAGACTAGT
TCTTTACTTTTCTTTGGTAGCTCTTTACTTTTCCTGCATATTTTCTATCT
GTGTATTCTGTGTAAAAACAGCATATTCTATGCTACACATATGGCCATAT
GACGATTAATGTGGGTGCGTTTTGGGCTACATTCTCTTTTTAAGATGGAT
CTAATTTTGTTAAAGTTATTAAAACTTTCTATAACTACATAGGTATCGAG
ATGCACTATCAAACTTTCAAAAATCACAAGAACTGTTGCGAGGAAACAAA
TTTGTGGATTATCGACAACTTGGTTTTAAATTCCAACTATATTCTTGTGA
GGTAGGGTGATAATCAGCTCCCGCTAATTCGAACTTAAATGGAGAATCTG
ATTTGTTCGAATTCCACATAAATTCGTATACAGAAACTAATTTAAAGAGG
GTTAGTTTGAATTATTTCGAAACATTCGTATAACAGAATTCCAAATTAGC
GTACCCTCAATCCCCCAACAAATATCTTGAGACAGAAGATTTCTAAACAT
TTTTGGAAGATAAAAATCCGTCCCCCGGACCCCACTGTCAGTGTTGAGTC
CGGAAATGGTCGAGAACTCAACGCTGACAGTGGGGGAAAGGGGGACCATG
TGAAGTGTCTCAGATATAAATTGGGGGATTGCTGTAGCTAGTCCATATTG
AGACTGCTGCTATTAACCTTCTCAGTTGGACATTGCGAGGAGGGCCCCCA
AGTGGTTTTCGTGATGACGTGATAGGGACTTTTTGTAGCGTGATTAAGTG
ATTTGGAATTTTTTTCTTCGTGATTGCGTGATGAGAGGTCAAAACGTGAT
CGTGATTTAAAAGATTTTTGAGCCGTGATACGTAATTTGGACTTTTTCAA
AGGGATATGTGATTGCTGATTTGCGTGATTGTGATTGAAGACAAAAAATT
GATGAGCGTTTCTTTCTCTGGGAAAATCATACACTCTTTTCAAAGGAAGA
GAGGTAGAGGCTCTTTGTTCTTATAAAACTGTTGCTGCGTATAAACGCTT
GGTCCTCCAAAAGTATGTAAGAATAGTGCTGACGATATACCTTATCACCC
AAAACTTAGTCGGCCTTAATTTTAGTCGGCCCAAATTTTTGTCACCTCGT
CAATTTAGTCGCTAAGGGCCGACTAATGATTAAGACCGACTAAAAATTAT
ATATTCGTAAATTCTTTGTTAAAGTAATACCGATATGAAAAGTGGATTAA
GGAAAGCTTAATTATAAACTTTTAATGTGGCCAAAATTTTAGTCGGCCTA
AATTTTCAATCGGCCCTAATTTTAGTCACCAAGCCAAAACTTAGTCACTT
AGGGCCGACCAAGTTTTGGCCGATGAGGTAAAAAGGAGCGTCTTACTATC
TGGAAAAGTTTGAAACTTTTAAGTGTTTTTTCTTCACATTTTATAGATTT
ACACCAATGAAGCAGCAACGCATCACCATTTGGGTAACGATGAAAGCGCA
CAAGCATCACTCAAACAAGCTTTAGAGATGAAAGCTGACAAAAGACATGA
AAGAATTATGGTAGATATTCAAAAGATCGCTGTAAGAGATTTCTTACTTG
TTCAAAAATCTTATCTTGTTTTCTTTATAATAGGGTAGAATCTACCACGC
TGGAGTTCTTTTGTGTATATCCCAGAGAAAAAAAATTTTAACGACCTGAA
ACTTTCTGACTTTTAACAAAATCTTATTAAGAGTACTTGTGCAAAATGTT
ACGGTCATAGGTCGTCCAGATCAGGTTTTATGACTTTATTGTGAAACTGA
CATAAAACCCATCTAAAATTGCTTAAAACTCGAAATTTTGCAGTGCTAAT
AACTTTTGAACTATTTATTCAATCATTTTCAATCATGTTCAAATTTTGAC
ACGTGATAGCCATTGACAATATAAATTTTAAAAATTAAAAAAAAGTTTAA
AAATGATGACGTCATCATAAATGAGGTCACAGGTCGACAGGTAGAAATTT
GGGGATGACGTCATCGGTTTTTGAANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTAATAAACGGGGGGGTCCTAATAAGGTCCGGGGGGGTTGGAAAAAAA
TCGAAAAATTAACAAGCGGGGGGGACCGTTTATTTGGCACCTAAGAGTAA
GACAATTCTATCGTTAGAAAAAGTCTAGAAAGAAATAGTTTTCATAACAT
GATAATTTTAAAACAGATAAGCTGTCCGAGATAATGAAAATTTCGGGCCT
AGCTAGTAAGAGGTGGTGGAGGTGTCCTCTCAAACTCCGTATCACTGCTT
ATTTTTCGGTATATGTATTTCCACTACCATAGACTAGTTCTTTACTTTTC
TTTGGTAGCTCTTTACTTTTCCTGCATATTTTCTATCTGTGTATTCTGTG
TAAAAACAGCATATTCTATGCTACACATATGGCCATATGACGATTAATGT
GGGTGCGTTTTGGGCTACATTCTCTTTTTAAGATGGATCTAATTTTGTTA
AAGTTATTAAAACTTTCTATAACTACATAGGTATCGAGATGCACTATCAA
ACTTTCAAAAATCACAAGAACTGTTGCGAGGAAACAAATTTGTGGATTAT
CGACAACTTGGTTTTAAATTCCAACTATATTCTTGTGAGGTAGGGTGATA
ATCAGCTCCCGCTAATTCGAACTTAAATGGAGAATCTGATTTGTTCGAAT
TCCACATAAATTCGTATACAGAAACTAATTTNGTTTTTTTCTTCACATTT
TATAGATTTACACCAATGAAGCAGCAACGCATCACCATTTGGGTAACGAT
GAAAGCGCACAAGCATCACTCAAACAAGCTTTAGAGATGAAAGCTGACAA
AAGACATGAAAGAATTATGGTAGATATTCAAAAGATCGCTGTAAGAGATT
TCTTACTTGTTCAAAAATCTTATCTTGTTTTCTTTATAATAGGGTAGAAT
CTACCACGCTGGAGTTCTTTTGTGTATATCCCAGAGAAAAAAAATTTTAA
CGACCTGAAACTTTCTGACTTTTAACAAAATCTTATTAAGAGTACTTGTG
CAAAATGTTACGGTCATAGGTCGTCCAGATCAGGTTTTATGACTTTATTG
TGAAACTGACATAAAACCCATCTAAAATTGCTTAAAACTCGAAATTTTGC
AGTGCTAATAACTTTTGAACTATTTATTCAATCATTTTCAATCATGTTCA
AATTTTGACACGTGATAGCCATTGACAATATAAATTTTAAAAATTAAAAA
AAAGTTTAAAAATGATGACGTCATCATAAATGAGGTCACAGGTCGACAGG
TAGAAATTTGGGGATGACGTCATCGGTTTTTGAATGACGTCGTCAATTTA
TTTTTTCTTCCTGGAAATTTATATCATAATGGAGAATATCTGTACCAAAT
TTCATGGCCATAGCTCTTCTAGATCAAAAATTATCGAGGGTGGCTAGATT
CTACTCCCCCCCTCTGGGACTACAAAAATCAAAAAAGCTGAGGTTAATAG
GGTTAAATCATGCAGAAAAACAATTTTTTTGCAGAATGAAAAGAAGAGTT
ACTCAATAGTACCTTTTCATAAAATTACGTTACGAACATCATTTGCCTCG
TTTTGAAATTATTGTCTCAATCAAAAGGTTTGGTACAATCATCGGAAACT
TCCTCTACCCACTATACGCTTCAGTATCTACACCACTATAGGTACAGGTA
GTTTTAGACCACGCTGAAATTATCAGAGGAAGATGAATTCGACGTGGTCT
AAAACCACCTATGAATAAGTATTAGAACTTCTGATTACCCATAATGCAAT
TTCTCATTCTAGAAAGGAAAGCCCATTCAGCTTTTCTATCCTCCACAAAG
TGAAATATTTCGACCAGCCAAAGCACTCGTCGCAAATGTAGAAAAGAAAG
ATTATCTTGGGGCTTCTAAAGTTATTTCTACAGATAGCGAGGAAGATTGT
TATGCATGTTTCTCTGGAATTAAAGATAAAGTCATCGAACAAAAGGTTTG
TTGCTAGGATCTTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007746XLOC_007746Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013869-exon-sc0000174-1575043694:191237..191328TCONS_00013869-exon-sc0000174-1575043694:191237..191328Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1575043694:188514..188623TCONS_00013869-exon-sc0000174-1575043694:188514..188623Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1575043694:187902..188114TCONS_00013869-exon-sc0000174-1575043694:187902..188114Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1575043694:187212..187294TCONS_00013869-exon-sc0000174-1575043694:187212..187294Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1575043694:186128..186236TCONS_00013869-exon-sc0000174-1575043694:186128..186236Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1575043694:183539..183673TCONS_00013869-exon-sc0000174-1575043694:183539..183673Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1575043694:182413..182616TCONS_00013869-exon-sc0000174-1575043694:182413..182616Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1510915933:191237..191328TCONS_00013869-exon-sc0000174-1510915933:191237..191328Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1510915933:188514..188623TCONS_00013869-exon-sc0000174-1510915933:188514..188623Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1510915933:187902..188114TCONS_00013869-exon-sc0000174-1510915933:187902..188114Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1510915933:187212..187294TCONS_00013869-exon-sc0000174-1510915933:187212..187294Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1510915933:186128..186236TCONS_00013869-exon-sc0000174-1510915933:186128..186236Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1510915933:183539..183673TCONS_00013869-exon-sc0000174-1510915933:183539..183673Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1510915933:182413..182616TCONS_00013869-exon-sc0000174-1510915933:182413..182616Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1491911889:191237..191328TCONS_00013869-exon-sc0000174-1491911889:191237..191328Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1491911889:188514..188623TCONS_00013869-exon-sc0000174-1491911889:188514..188623Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1491911889:187902..188114TCONS_00013869-exon-sc0000174-1491911889:187902..188114Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1491911889:187212..187294TCONS_00013869-exon-sc0000174-1491911889:187212..187294Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1491911889:186128..186236TCONS_00013869-exon-sc0000174-1491911889:186128..186236Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1491911889:183539..183673TCONS_00013869-exon-sc0000174-1491911889:183539..183673Clytia hemisphaericaexon
TCONS_00013869-exon-sc0000174-1491911889:182413..182616TCONS_00013869-exon-sc0000174-1491911889:182413..182616Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174supercontigsc0000174:182413..191328 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.91632	3.04259	2.71595	2.9253	0.589619	0.828971	0.285542	0.496693	1.2858	1.52338	1.07148	0.692841	4.36913	1.901	0.219537	0.602459	1.31326	1.11459	6.08837	5.89939	0.667158	1.32108	0.896897	1.83987	2.14098	2.01031	2.09266	2.50809	2.55012	1.08798
Blast
[Close]
BLAST of TCONS_00013869 vs. Swiss-Prot (Human)
Match: NCF2 (Neutrophil cytosol factor 2 OS=Homo sapiens GN=NCF2 PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.502e-29
Identity = 66/226 (29.20%), Postives = 124/226 (54.87%), Query Frame = 2 
Query:  245 MSSADDIAAWYEGVQLYDINRIDEALEVFKNTK-QNAKMLLNIGCCYLRKNDLQSASENYEKAVKSDPHSALGFFFLGLTNYFQDKYRDALSNFQKSQELLRGNKFVDYRQLGFKFQLYSCEIYTNEAATHHHLGNDESAQASLKQALEMKADKRHERIMVDIQKIAKGKPIQLFYPPQSEIFRPAKALVANVEKKDYLGASKVISTDSEEDCYACFSGIKDKVIE 919
            MS  + I+ W EGV   D      AL+ F   +  ++++  NIGC Y    ++  A + + +++  D H A+ +F  G+  Y  +KY  A+ + +++   LRGN+ +DY+ LG +F+L++CE+  N A  +      + A+  L  A  MK++ RH +I   ++ + K K  +    P  ++FRP +  VA + KKDYLG + V+++  ++D ++ F+ ++ +  E
Sbjct:    1 MSLVEAISLWNEGVLAADKKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECVWKQKLYEPVVIPVGKLFRPNERQVAQLAKKDYLGKATVVASVVDQDSFSGFAPLQPQAAE 226
The following BLAST results are available for this feature:
BLAST of TCONS_00013869 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCF21.502e-2929.20Neutrophil cytosol factor 2 OS=Homo sapiens GN=NCF... [more]
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