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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013944 ID=TCONS_00013944|Name=TCONS_00013944|organism=Clytia hemisphaerica|type=transcript|length=903bp
agtttattaaaaaaaatttaattctcAATTAAAGATATCACGCTGAAAAG
CTTGGTAAAGCAAAAACTGACTTGTTTCTTATCTTTTAAATATTATTTAC
TACACGTACAAGTCATTTTTAAAGAGTGTGCTTGAGGTTAGCATATGCAA
AGGCTAACGGTAATACAGATAAAGAAACTATCGTAATTCCTCtatataca
ttttttaaatagataTTGAATATCATATCATCCATAAGTGACCTAATAGC
AATGTTTTTATCTTTACTATTATCATGGGTACATTCATTTCCATTAAgtg
tttcattttgattttggttAACCTCCttgatattttctttataaacgCTT
TTTGTTCCCCTACGACTatgacaacaacaacaacagcaaaaaATGACTGT
AGTGACTGTCAAAAATGGTAATGTAATATAGGTAAACATAAGGGCTACAA
CTATTCCAGAAGTCATTCCGTTTGGTGAATGCGATGGTGGATATCCAGAA
GCCAAGGTTAAAAACAATGCTATCACAACTATCGCAAAATAAATCAAGGT
CATCTTAAATAAGTACATTTTCAACCTTAAAAATAGTCTCAATCTGTTTG
TTTCAGCAGTAACTTTTTTGTCTAAAGTATATAATCATGATAAAAAAAGT
CACTTTACCcaagcttatttttttctttattgcgAAAACAAtaacgacaa
caacaacaacaaaagagCAGAGTAGAGGAGACCCACAAGGGTAAAACAAT
TACAAGTGACATTTCTGGACCCCATTGCATGCCATTTGGTGAAATTCGCT
CACTTTCAAATTGAGATACAAAATAGTAAAGTGCAGCTAAAGTTGCAATG
TAAAGAATCAGTATTTCTAACACTGACATTTTGAAATAGCtgtaaaatta
aaa Run BLAST on NCBI protein sequence of TCONS_00013944-protein >TCONS_00013944-protein ID=TCONS_00013944-protein|Name=TCONS_00013944-protein|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
MYLFKMTLIYFAIVVIALFLTLASGYPPSHSPNGMTSGIVVALMFTYITL
PFLTVTTVIFCCCCCCHSRRGTKSVYKENIKEVNQNQNETLNGNECTHDN
SKDKNIAIRSLMDDMIFNIYLKNVYRGITIVSLSVLPLAFAYANLKHTL Run BLAST on NCBI transcript from alignment at sc0000174:529960..530862 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013944 ID=TCONS_00013944|Name=TCONS_00013944|organism=Clytia hemisphaerica|type=transcript|length=903bp|location=Sequence derived from alignment at sc0000174:529960..530862 (Clytia hemisphaerica)
ttttaattttacaGCTATTTCAAAATGTCAGTGTTAGAAATACTGATTCT
TTACATTGCAACTTTAGCTGCACTTTACTATTTTGTATCTCAATTTGAAA
GTGAGCGAATTTCACCAAATGGCATGCAATGGGGTCCAGAAATGTCACTT
GTAATTGTTTTACCCTTGTGGGTCTCCTCTACTCTGctcttttgttgttg
ttgttgtcgttaTTGTTTTcgcaataaagaaaaaaataagcttgGGTAAA
GTGACTTTTTTTATCATGATTATATACTTTAGACAAAAAAGTTACTGCTG
AAACAAACAGATTGAGACTATTTTTAAGGTTGAAAATGTACTTATTTAAG
ATGACCTTGATTTATTTTGCGATAGTTGTGATAGCATTGTTTTTAACCTT
GGCTTCTGGATATCCACCATCGCATTCACCAAACGGAATGACTTCTGGAA
TAGTTGTAGCCCTTATGTTTACCTATATTACATTACCATTTTTGACAGTC
ACTACAGTCATtttttgctgttgttgttgttgtcatAGTCGTAGGGGAAC
AAAAAGcgtttataaagaaaatatcaaGGAGGTTaaccaaaatcaaaatg
aaacacTTAATGGAAATGAATGTACCCATGATAATAGTAAAGATAAAAAC
ATTGCTATTAGGTCACTTATGGATGATATGATATTCAAtatctatttaaa
aaatgtatataGAGGAATTACGATAGTTTCTTTATCTGTATTACCGTTAG
CCTTTGCATATGCTAACCTCAAGCACACTCTTTAAAAATGACTTGTACGT
GTAGTAAATAATATTTAAAAGATAAGAAACAAGTCAGTTTTTGCTTTACC
AAGCTTTTCAGCGTGATATCTTTAATTgagaattaaattttttttaataa
act Coding sequence (CDS) from alignment at sc0000174:529960..530862 >TCONS_00013944 ID=TCONS_00013944|Name=TCONS_00013944|organism=Clytia hemisphaerica|type=CDS|length=450bp|location=Sequence derived from alignment at sc0000174:529960..530862 (Clytia hemisphaerica)
ATGTACTTATTTAAGATGACCTTGATTTATTTTGCGATAGTTGTGATAGC
ATTGTTTTTAACCTTGGCTTCTGGATATCCACCATCGCATTCACCAAACG
GAATGACTTCTGGAATAGTTGTAGCCCTTATGTTTACCTATATTACATTA
CCATTTTTGACAGTCACTACAGTCATtttttgctgttgttgttgttgtca
tAGTCGTAGGGGAACAAAAAGcgtttataaagaaaatatcaaGGAGGTTa
accaaaatcaaaatgaaacacTTAATGGAAATGAATGTACCCATGATAAT
AGTAAAGATAAAAACATTGCTATTAGGTCACTTATGGATGATATGATATT
CAAtatctatttaaaaaatgtatataGAGGAATTACGATAGTTTCTTTAT
CTGTATTACCGTTAGCCTTTGCATATGCTAACCTCAAGCACACTCTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013944-exon-sc0000174-1491911889:529960..530862 | TCONS_00013944-exon-sc0000174-1491911889:529960..530862 | Clytia hemisphaerica | exon |
| TCONS_00013944-exon-sc0000174-1510915933:529960..530862 | TCONS_00013944-exon-sc0000174-1510915933:529960..530862 | Clytia hemisphaerica | exon |
| TCONS_00013944-exon-sc0000174-1575043694:529960..530862 | TCONS_00013944-exon-sc0000174-1575043694:529960..530862 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000174 | supercontig | sc0000174:529960..530862 . |
Blast
The following BLAST results are available for this feature:
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