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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014000 ID=TCONS_00014000|Name=TCONS_00014000|organism=Clytia hemisphaerica|type=transcript|length=1044bp
GTACATGAAAGAGAATAAGAATTTGTTAGGTCCAGTCAGTCTGCCACCGC
CACCTAAGAGATCTGGTATTGTGGATCGTTTATCGAGCACTGGTCAAAAC
CAAACACGTATTGGTTGTCGTAAATGTGGTTATCctggtcatTTAACATT
CCAGTGCTTCAACACAGCGGAAACTTCAGCACCGGTTGATGATGTCGAAA
GCACAACATCCGATTCCGAAGCTGAAATCCAAGAATTGGAAGCTCAGTTG
AGGgagaaaagaaaacaagaaGAGTtgaaaaggaaaaagaagaaagaaaa
gaagaagaaaaaggagAAGAAGAGgaaaaggaAGTATTCGGACAGCGAAT
CTAACAGTGAAAGTGATTCTGACGATAAAAGAAGAAGCAATAGTAGTAGA
AGAAGGTGTAAAGAAGAGCGCGACAGAAAAcgaaaagagaaagagaaaaa
gaagaaaagaagccggtattcttcttcttcatcttcaagcGATTAACTTG
TGGTTTATACATGCATTAAAGGAAATTGAATGTTCGGGAACTGAGGTTTA
GTTGACAAGATGTATTGCTAAAGATACCCAACTCAGGCTGATTCACACTG
TTGAAGTTGTTGATAATTCAAGCATCGTCAATCCCCAAATGACTTCTTCA
CGGGCGAATTCGATTATCTTGCTTTTGCAGATTCCTTACAACAGTCTAGC
TGACATCCGGTCGTTAGGACCATGGGTGAATGCcgcctaatttttgaaaa
tctggaCATTTGAGAGAAGTGTActgaacaaaagaatttaatatATTGGT
TTTTGGCAGACATAAGTAAAGCTACATTTTTAATACTTTCAGACTTTGAA
TATGGCTAACCattatattttgtgtttttgacatttttaacaaATTCATA
ACCAAGTTGTACATGATTTGTATtcaatttttgtatatttttgctTAGTA
ATTAGCTTTTATCGTTATTCAAATTAAGCTTTTTACCATCTGACTATGTA
TATGATAATGACGTCTTCTTTAGGCTTTTTAGGCCAATTACCAC Run BLAST on NCBI protein sequence of TCONS_00014000-protein >TCONS_00014000-protein ID=TCONS_00014000-protein|Name=TCONS_00014000-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
YMKENKNLLGPVSLPPPPKRSGIVDRLSSTGQNQTRIGCRKCGYPGHLTF
QCFNTAETSAPVDDVESTTSDSEAEIQELEAQLREKRKQEELKRKKKKEK
KKKKEKKRKRKYSDSESNSESDSDDKRRSNSSRRRCKEERDRKRKEKEKK
KKRSRYSSSSSSSD Run BLAST on NCBI transcript from alignment at sc0000175:409351..421454- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014000 ID=TCONS_00014000|Name=TCONS_00014000|organism=Clytia hemisphaerica|type=transcript|length=12104bp|location=Sequence derived from alignment at sc0000175:409351..421454- (Clytia hemisphaerica)
GTACATGAAAGAGAATAAGAATTTGTTAGGTCCAGTCAGTCTGCCACCGC
CACCTAAGAGATCTGGTAGGGATTATTTTTTAATACATCTATCTGGAGAA
AGACAAATTAAAACTTCAAACTTACAGTTGACGCTCTCTGGTTCGATTTT
CAAGAGGAATTTGATTTTCATCGAATAAGGGAGCGCATCGAATAAGGGAG
CGCATCGAATAGTAGAGCGTTGTTTATAAGAGTCTCTTGTTGGTAGAGAC
TTTCAATTTTATCGAATAATGGAGCGTATATAATCGAGTAGCTCTCTAAT
TCGAATTTGAAGGGGAATTGTATTTTCATCGAATAAGAGAGCATATCGAT
TTTAGAGAGCGTCTTTTATGAGAGTTACTTGTTAACGGTGACTTTCTATG
TTATCGAATAATGGAGAGTATCAAGGAGTAAAAAGTCGAATTCGAGAAAG
TCAACCGTACGTTTTCATCCGGAAGGTAATGGAATCAGATATCCCTTGGT
TTCTTAAGTGAAAATTCAATTTGCTTCATATTTTTACTTTAAGGTTATAA
TCACAGAAGCGCTGTTTATTATTCGGGATAATATAACGTAAATATTCGGG
GAAAAGGGGATTTAAATAACCCCTCCAAAATTGAATTGTTCGATGACAGA
AAGTTGAAGTGCTAAAAAGCTATAAAAACTCGGTCGTTTTATAATCTATT
ATACTAGTTTGAGTAAAGAAAACGATTTAAGTTAATTTCATACTCAAAGT
TTCATGCCATCCAGGATGGCAATCTTCAGTGAAATGAACGTTCTATAAAA
ATCTACAATTTAATGTCTTCAAAAGGTTTTCTGACGTCGATTCAAAATAA
GAATTATTCGAAAGTTTCGAGGAGAAATTTCCGTCTGTGACGGCATTTGG
GGATGATTTCAGTTCGCTTGTTTAGCAAGTTCCGACCCGGATAGGTAGCA
ATCTCAAATCCAAATTTCACTAAGCAACACCGCATTACCCGCATCAGTTT
CACCAAGCATCACTGCATCAGTTTTGAAGCCATTACGAAGGCGATTTAAA
TCCCTTGAATCTTTGAGTGTTACTTTTATAGATTGAGTAAATTTCTTTGT
ATGAACTCCTCTGTAATATTTTGAAAATGAGGTAAGCGTTGCTCTGTACG
GCCTATTTATAAGTTGGACATAATCCGTGGGAGTTTTTTCGGAACTATAT
AATGATGAGAAACTTTGAATTAAGTAAGTCTGCGACCGCAGTCGGAGGCT
ACCCGAAGGCTCCTCTTTCGATAACTATCTACCCGAAGATAGGGGAGGGC
GCCACTCTTTCTCCCTGGATTGGTCCGCTTACCCTTGATCCTTCTCTTAA
TTGCTGAGTATCAAGCAGAGAGGCATCAATTACCATTTTGGAAATCTTTG
GTATGATCTGGTTGGGGGGCTGAACCCACAACCTTGCGCACCGTAGCTGG
ATGCTCTACCACTGTACTACGGTCGCTACGGTAGCTTTTTCTGAACTTAC
AGTATCCTTCGTTTTTCAGGTATTGTGGATCGTTTATCGAGCACTGGTCA
AAACCAAACACGTATTGGTTGTCGTAAATGTGGTTATCGTATGTAAAAGC
TTATTTTAAACTCTGATTTTAGCGGGAACTAATTTTCGCGATCGAAAAAA
AATGGAAAAAATCGCTTTTCGCAGGAATTAATTTTTATGGTTTTGCCCTA
TTTTGGACACATTTTTTTCAATTTCCTAGGGATTTTCGATGAAAATGGAC
AAATTTGTTATTTGTGGGTTATAACACGCCCGGCGGAACAACCATAAAAG
TGGGGAGGTTGAAGACTCAAAATGAGACAAAATTCGCCAGGATATTGAGA
AAAAAAATCTCATTTGCTCAAAAGTGGGGAGGCTGAAGTCTCCCAAGTCT
CCCCGCTTCCGCCGGGCCTGTATAATTTTCACAGGCTCAGGCAAAATTGG
GTACGGGGACGTGCCGCTTGTCAGGGTTCCTTTTTTAGGCTCTGAAGATA
TGTGACAGGTTCCCAAATTTACTAATTTTCAAGATGTGTATCTGACAGGG
TCGATTTTTTATTATTTTGGACAATTTTCAGGGTGGAAAACAGAAAATCT
TTCAAATTTTCGTCTATTTTTATTTTCAGGGCGAAAATAGGAAACATTTT
CAATTTTTTGTTCTGACAGGGTCCCAATCTTGCCAATCTTTCATATCTGA
CAGGGTCCACTTTTCAAACTCAAGCAGCACGTCCCCGTCGGCCGTCAAGG
TCAATGCCCCCCCCCGGGAACCGTGGACACTCAACGAGGGGCAGCCTTGA
CTGGAGAAAAAATAAATAAATTTCAATAAAAATGCCAAAAATGAACAAAA
GTGACGAAGGCGCAGTGAACATATTATAAAGCGCCCGCCTCGGATACTTT
ATCAGAGAATAAAGAACAGGTTTAAGACATTCTAATGAAAAGATTTATGT
GTAATTCCAAGGATGAAATAATCTATCACATATTCAACTTTGTGTTAAAC
TTTTTTTTGTCTGAAAAATGAGCTTTTCAACATCTTTGGCTTTAACATCG
AATTAGGTTTCTTGATTGTACTTTCTTCTAATCGTTTTAAGCTTATTGGG
CTGACCTTCCAGCGCAGCTGGTTTATTCCTTTAATTATTGATCTTTCTAT
TTCTATAAAAACCTCAACATTTGTGGTATTTTTTTATACAAAAGAATCCA
AAAATAAACTGGAGTAAAGTTTTCTGTTTTAAATTTTAACCGCTTAAACT
CTATTTTTAAAGAATCCCACATTGAACTTTTAATTAGCTTTTTTCTGAAG
GTTTATCGGTTAATTTGGCACAATTGCATCTTAATTTTAGGCGACCCGAA
GGCTCCTCTTTCGATAGCTATTTACTTTAAGGTGGATTACCTGGATTGCT
CTTCTTACCCATCATTCGATTTTGGACTAAGTATGAATTCTTTGGTATGA
CCCTGCCGGGGATTGGACCCACGACCCTCTCTGCACGCCGTAGCCGGATG
CTCTACCTTTGCACTACAGTCGATCATTTTTTAAAGGTTACCTTTGAGAA
TATTTTAAAATTATTGTAAAATCCTAGCGGCATATTAGGCCATTCCATTT
TATATCCATACAGGGGGGGATGGACCAATATTTCCAGAGGATAATCCGAG
AAAAACTCCCAGAAGGTAATCCGAGAAAAGTTTCCAAGGGGTGTTCTTTC
ATTTTTCCAAAGGGGTAAAGAGTTTTTCTAAAATTTCCAGGGGTAAAAGA
CTAATTTTATCTCGTCCACCCTCACTTTAAGGTATGAAAAGAATTTTTCC
AAGGGTATTTTTGTAAATTTTGCCATTTTTCAGGGGATATCCACACATTT
TTAATAATTATTTTTTGACTTGAAAAGGTTCGTCCACCCTGTATGGTTTT
TAAATGGAACAACCCATTTGGGGGTTTTCATATGAAAGATTACCTTTTTT
TTCTTATTTTTCCAGCTGGTCATTTAACATTCCAGTGCTTCAACACAGCG
GAAACTTCAGCACCGGTTGATGATGTCGAAAGCACAACATCCGATTCCGA
AGCTGAAATCCAAGAATTGGAAGCTCAGTTGAGGGAGAAAAGAAAACAAG
AAGAGTGTAAGTTACCAAGCTATAATATAGTTGTTGTGTGAGTGAGGAGA
GAGTCTATCACCATATTTCCCTAACACCCCTGTCTGGAAGAGCTTGGGAT
TCGAACACAGTCCATTGCGGTGAAAGTCTGATCGAAACCTTCACACTTCC
AATCGGCAGAATGTTAGTGAGACACAGCGATAGCCTTGTCCAGATGGCGT
GTGTATACCGAGTTTATCGTTCTTTATCTGCAATTTGAGCTTTACTGTAC
TAAAGTTCCTTCGGCTATACCTTTACTGATCGTATCTAGCGCCCTTCTAA
CGCCCAACTGCGCCTTCCACGCTNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNCTCCCCTAGGTTCCTTTAGCCCGCCCCT
TTCGTAGTCTAGACTCACTCACCCACTGCGTCTTATTCGTCTGCTAGGCC
AGCACTCGGATAAGGCTCCAGTACATTACTAAGCTCATTTTGACATCAAT
CGATACTTCGATTATCATATAGTTGTTGTTTTACTAAAGGAGTTTTGATT
TTCCACATATGGAATTTAGAAATATCCAGACCTGCACGTTTTTTTATGAG
AACAAACTATATAAGAACACAAGGCTTCGATGGCCAAAATGCTAAGAATT
AGTTAAGAATATTGTAAGCCTTTGCGGACTCTAAAACACCCGATTTCTTA
GGAAAATTGATCACAGAATGGGGAAAATAAGAACATGTTAAGAACATTTT
TAGGCTTAAAACATGAAAAGTTAAGAACATCCAGAGGCTTCAAAAATTTT
GGATATATATAAAAAAACGTGTGTGTGTGTGTGGTCGAATAATTAATTAA
CATCTGGAAATCGACGATCATTGGGCTAATTCTTTCCTGCGTACAGCCTG
ATCATTTTAGATGGAAGTTGTTTGAATGTCAAAAGAATACCTTTTATTAC
ACGAATATTACTAGTCATTTTACTAACACGAATTGAACCCCCTAAATTAA
AACCAGCCGTATTGTCCTTCAGAAAGCACAAAAAATTCGTGTTAATTTTT
TGCGTGTTAATTTCAAGGCCGTTGAATACTTGCCTAGTAATATTCGTGTA
ATAAGGTATTTACTTTTTTTTATTGTCTAATGATGTTTGTGCCGTTATTA
ATTGTGTTCTATCCCCTCAAATTTGTTATTTTGAAAGCACTTGAGCTGAT
TAAAACGAGATGAATTAAGTCATTGTAGTGTTAACATTTTACGTCAAGCG
GCGCTACATCGTTGAAAAGTAAGATCTAGCGCTCTCGATGCATTTATAGG
ACTGTTGAGTAGTACTACCTTTAAGGTACCACTTAAAGAAAACTTTGAAA
AGCCAAAGAAAATTTTAAGTGGTTAGAATGGAAAAGCCTCCAGGGTTTAT
ATGAAGCTCATTGACTTTAGCATGTCTCTCGGGAAAGTGATTTGTCAAAG
CGTGAAAGAGATAGCATGTCAAAATTTAGAGCTTTTAATCTGAAGTTTAT
ATAAAGTAGGTTCTAAGAAAAAAAAATTAAACGGAAAAGTCATTGAATTA
TGAATTGATCTATGAAGTGNTCTGAAGTTTATATAAAGTAGGTCCTTAGA
AAAAAAAATTAAACGGAAAAGTCATTGAATTATGAATTGAGCTATGAATT
ATGAAAAGTACTACCATTAGGGTACCACTTTTCAAAAATCTCCGATCAAA
GATGACAGATAAACCTTGGTCCAGGGAATATTAGGTTCAGTGGTCTGAAC
ATACAAAAACGGTTGAAACACACAGCACCTTCACCTTATCTGACGTCAAT
ATAGTCAATTTAGTGTCTTCTCCTTGATCTGCGAGAGCATTGATTTCCGA
AACCTAGACGTCACATACTGAACAAAATTTAAACCATGTTTGCTTTGTGG
TGCCGTCTGACGGAATCTGATTTCCAATGCTTCTCGCACTTTCCTATCAA
ATTTTCCTCAATATTTTCACTCTTTTCTTTCCGAGAACTTTCGTGCTTAG
CAGATAAAGAAATAATCAGTTCTCGACAATCTAAGACCATGTTCACACGT
TACTCTTCCGTTTCGCTCCGGTCCGATTTTCGTTACGAATCGAGCGTGTT
CATATTGGTTTCGAAAACGAAGCAGTTCCGTTCAACGAAAAAAGTGGAGC
GAAACGGTTTCGATCTGTTTTGCTTTGTCACGTCTTCTTTTTTGACGTTT
CGAATTTTGACGCTCAGACTTGTTTCGGAACCGTTTCGTTTCGGAACGGA
ACAGAACCGTAACGTCTGAACATGGTCTAAATAATTGGTTTTTGTAAGAC
GGAGGTAATTGAAAAATTACTTTGTTATAGTGAAAAGGAAAAAGAAGAAA
GAAAAGAAGAAGAAAAAGGAGAAGAAGAGGTAGGAATTTCCATTGAATTA
TAACTAGCATCATATCGCCGATTACCTTTAGTGCATGACGCTCTCTATTC
GACGCTCCATTATTTGATAACATTTAAAGTCAACGTCAACAAGAAACTTT
CAAAAACAACGTTCCGCTATTCGATACGCTACATTATTCGATGAAAATCT
AATTCCCTTGGAAATTGATTTAAAGCTAGCTTCAACTGTACAACACAACA
ATTACCTTTAAATTTCTGCAAAATCTGTACGGTGTTGCTGGCTTCAACAA
AGTCATTTTCGTACGACGTTTTTTTTTTTCAGGAAAAGGAAGTATTCGGA
CAGCGAATCTAACAGTGAAAGTGATTCTGGTAAGATGTATTTAATTATGT
TGTTTTAAAACAGTGTTAAAGTTTTTCTGTTTTTTCTTCATTTTACGAGA
ATTTTTCCTTGAAGGGGACTGAGAATTTGTTCGAATTACCCTATCGGCGA
AAACTTAGCCGGCCTTAATTATTAGTCCGCCCTAATTTTAGTTACCTCGT
CAAAATTTAGCCACTAAAGGCCGACCAATAATTAAGACCGACTAAAAATT
TGGGCCATTTCTAAATTTACAAGCGGATGGAAAATAGGAGAAAGCTTAAA
ATACTGAAAAATAAGGAAAGCTTAATTATAAACTTTAATTTGGCCCTAAT
TTTTAGTCGGCCCTAATTTTAGTCACCAAGCCAAAAATTAGTCACTTAGG
GCCGACTAAGTTTTGGCCGATAAGGTATAGAAATATTAAAATGGGTGTAA
GTTCGAAAATTGGCGAGAGTTCTGCATAATTCACCAAAATCTGAAGAATA
TGTGCTGATTTATTGTGTAAGATCCATTTTTCTTGCTTCGAACACTTTTA
AATATTACAGTGGTATCCCCCATAACTCGAACACGCACGGGGAACACAAA
TCTGTTCGAGTTAAAGAAATTTCGAGTTATGGAGAAAGGTTTTTATAAGT
TATTGTCAACTAAAGGGATCATGAAACTTTTTTTCGTGTTAAGGAGACAT
TCGAGTTATAGAGGTTCGAGCTAAAGAGACTAAAGTGTACTTAAAGTATA
TGTCCTTATTACATCGACACGTTCATTCACTAATTGGCGTAGAAAGTGGC
AAAGCTCTGGATTGATTTTATGCCGTGCTATATGATAATTTTCAACTAAA
TAAAGTTTGGTTCAGAAATTACTCGAACTTATTCGAACTCGAAAGTTAGT
AGCTATGAATACCTTTTCGTGTAAGACTGTCTGGATGAACGGTTTTGACC
TTTTTCAAAAATTATCAATTCATTCTGAATATTCTGTTTGAAACAATCCA
ATTGTTATATGATTTTCAGACGATAAAAGAAGAAGCAATAGTAGTAGAAG
AAGGTGTAAAGAAGAGCGCGACAGGTATTCTATTAATCTGGATTAAATTT
CGCATAGATAAATTATTGCAAAATTCTTTTAGGAATTTCGCCCAAACCTC
TACAGGGTGGCCAGCGATACTGGAAATACTTGAAAATACTTGAATATACT
GGAAAAAAATATTGGTACTTGATTATACTGGAGTTTTTGAAAAAATGCCC
GTTTTTCCAGTATATACTTGAAAATGATAAATCGGAATACTTGAAAATAC
TTGAATTTCTTTTTTCAATCAAATCTTCTTTTTCCAGGGCTCTTACAGGC
TGTTTTGAAGTATAAATTTTCCAAAATTTTCTATTCGGACCCAACCATGG
TGGGTCCTCCTGATAACAATGTATTGTACCCTATTTGTAAGGTTAGACAT
TCTTGGTTGGTCTTAATCACTTAACCTATTTGATATGGCTTTTTTTTAAA
AGATGAACCTTAATGGGCATACAAAACTGTACAAAAAATGAAAAAAAGTA
AAAGCAGAATCTTAGATATTCTTCAGCTCAAGTTATTTACTGCAAGATAA
TCCTCATTGAGAATTTCAAAAATCTAGCCTTTGGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACTTGAAAAT
AGCAAAGATATACTTGAAAATTATCAAAAATGCTCCAAAAAGTACTTGAA
TATACTTGATTTTCAATGACTAAAATCGCTGGCCACCCTGCTCTAGGAAA
ATAGAAGAAAATAGGTGAAAAAAGAAACCGATTCGCGAAATTTTGTTCAT
GTAAAGCAAGTACGAATCCACCTCATTATTATTCAAAATCCCTTACAAGA
ATATCCGTAATGCGAGATTCGTTGCGTGAGCGGAAAACAGACTCATAAAG
GCCGGTCTCCACTTGCGCGCGCTGCGATCGCACTTTTTTATTGGACCTAC
CTCCGGGTACCCCGGTGGAGGTCCTATAAATTAACCGTTGTCCGTTCGTC
TGTTACCAGCTTTTCTCGAGATTAGCTCATTAGTTTTTTCTGATTTTTGG
CACAAAGATGCAAAATGGCAATGGCCAAAATGTGACGGAGCCCGATTTTC
GAAAAGAAAATTTCCGGAAATTATTTGCCGGAAAAACTGTTTTTTTGGCA
TTTTCTCGAGATTTTATCTTTAGTTTTTTCTGATTTTTTGCTCAAAGATG
CGTATTAACAATGCCCAAAACATGGCCGAGTCCGATTTTGAGTTTTCGGC
CGAAAATGCCGGAAATATGCCGGAAATCGCCGTTTTTCTGTATTTTCATT
GGACTTTTTTTTATTATTGGTTGTTTTTTCATTCAAAAACATTATTAATA
GCAATGCCCACCATCAAGCATGTTTCAATTTTCAATAAAATTGATTTTTG
AAGCCGGGACTATTTAAAAATCACCGGAACAACAGTATTCCTTGAATTTT
TCGAGATGTACTTTATATTTTTTTATGAAATTTTGCATATTGATCATCAT
CAGGTAGGTCCATTCAGCATCTAGCTTGTTTCAATCCTTTTTGCTTGGAA
AAAAGATTACATCATTTTTTTCAACCGTTACGTCAGATCGCGCCAATGGA
GTTGCTTCATTTTTCTTTTGACCAATAGCGTGGAAGCTTTACTCAAAAAA
GTGCGATCGTAGCGCGCGCAAATGGTGACCGGTCTCAAGGATTACGCCCA
TCTCGAACAAGATCATTCTTCGCTTGCCTATTGTTCTGTTTTATTAGCTC
AGATAAAGGTAGATGTTGACTCACTCACTTGGGCAGCGAATAATAAAGCC
TTTCGAATAAATTCCTAAGGTTATCTTGTCAATGAATCTTTCCTTTGAAA
GTATAATCGACACCATTGAAATTAGAGCCTAGAAGGGGCTGGAGACTAAA
CTCTTGGATTGGAAATAAGCCACTCATTTCCCATCCGAGACACGTGAACG
TTGTGGTTTTAAAAACTAGATTGAAAATAAAATTCATCGTCAGGTTTCGA
ACAACGTGCCGTAGGAAAGCAAAGAGAACGCTAGATTTAATGCGTCATTC
TAAAAGTAGCACAAATCTGAAGAATTCACTTTTTCTTGCTTGAGAAAGAT
TGAAGATTCCTCTCTTTCCCCTTCGGGCTTTAAGCTCGATCAATGATGAT
CACATTACTATTTAGCGACCGTAGCATGAAGGTAGAGCATCCAGCTACGG
TGCGCAATGTTGTGGGTTCAATCCTCAGCCGGGTCCATACCAAAAATTCC
CAAAATGGTACTTGATGCCTCTCTGCTTGATGTTCAGAAACTAAAAAGAC
GGATCAAGGGTAAGTTGAGAAATCCAGGGAAAGGAGTAGCGCCCTCCCCT
ACAGCTAGAGAAAAGGTAGCCTCCGGGGTCGCGCTCGACTGTGTTTGCAA
ACTTACTTACTACTTACTTACTACTTCTTTAGAAAGGCGTAGTGGTATAG
TGGTTATGTTATCATCCTTGTTTCCCGCATGGGAGGCCCGAGTTCGATAC
CCACCGTGTCTCTACGATTCACTTGACAAGTGAATATACATTCGCCCGGG
TCAACCCTTGCCATGTGAGGGGAATTGGGTACCAATACTCTGATACAAGA
GTGTGGGTAGATTAGACAGACATTGTGACGTGTCATGGCATTCATAAGGT
TCGGCCTCGCGTGAGCATCGCTCTCCCAGTGTCGTTCGAGTGTCATGGTA
TACGCCATGGCTTGACAGCTCGCGTCTGTCAAGTCGTAGCGTCTGTCAGC
GCGGTGATTCATACTCCTTCGTGGGTAGGACCCATCCCGGATGCATTCGG
CGGGCTCATATCTATCTATTTCTCTATCTACTTTAGAAAACGAAAAGAGA
AAGAGAAAAAGAAGAAAAGAAGCCGGTATTCTTCTTCTTCATCTTCAAGC
GATTAACTTGTGGTTTATACATGCATTAAAGGAAATTGAATGTTCGGGAA
CTGAGGTTTAGTTGACAAGATGTATTGCTAAAGATACCCAACTCAGGCTG
ATTCACACTGTTGAAGTTGTTGATAATTCAAGCATCGTCAATCCCCAAAT
GACTTCTTCACGGGCGAATTCGATTATCTTGCTTTTGCAGATTCCTTACA
ACAGTCTAGCTGACATCCGGTCGTTAGGACCATGGGTGAATGCCGCCTAA
TTTTTGAAAATCTGGACATTTGAGAGAAGTGTACTGAACAAAAGAATTTA
ATATATTGGTTTTTGGCAGACATAAGTAAAGCTACATTTTTAATACTTTC
AGACTTTGAATATGGCTAACCATTATATTTTGTGTTTTTGACATTTTTAA
CAAATTCATAACCAAGTTGTACATGATTTGTATTCAATTTTTGTATATTT
TTGCTTAGTAATTAGCTTTTATCGTTATTCAAATTAAGCTTTTTACCATC
TGACTATGTATATGATAATGACGTCTTCTTTAGGCTTTTTAGGCCAATTA
CCAC Coding sequence (CDS) from alignment at sc0000175:409351..421454- >TCONS_00014000 ID=TCONS_00014000|Name=TCONS_00014000|organism=Clytia hemisphaerica|type=CDS|length=3465bp|location=Sequence derived from alignment at sc0000175:409351..421454- (Clytia hemisphaerica)
AAAACGAAAAGAGAAAGAGAAAAAGAAGAAAAGAAGCCGGTATTCTTCTT
CTTCATCTTCAAGCGATTAAACGATAAAAGAAGAAGCAATAGTAGTAGAA
GAAGGTGTAAAGAAGAGCGCGACAGGAAAAGGAAGTATTCGGACAGCGAA
TCTAACAGTGAAAGTGATTCTGTGAAAAGGAAAAAGAAGAAAGAAAAGAA
GAAGAAAAAGGAGAAGAAGAGCTGGTCATTTAACATTCCAGTGCTTCAAC
ACAGCGGAAACTTCAGCACCGGTTGATGATGTCGAAAGCACAACATCCGA
TTCCGAAGCTGAAATCCAAGAATTGGAAGCTCAGTTGAGGGAGAAAAGAA
AACAAGAAGAGTGTATTGTGGATCGTTTATCGAGCACTGGTCAAAACCAA
ACACGTATTGGTTGTCGTAAATGTGGTTATCTACATGAAAGAGAATAAGA
ATTTGTTAGGTCCAGTCAGTCTGCCACCGCCACCTAAGAGATCTGAAAAC
GAAAAGAGAAAGAGAAAAAGAAGAAAAGAAGCCGGTATTCTTCTTCTTCA
TCTTCAAGCGATTAAACGATAAAAGAAGAAGCAATAGTAGTAGAAGAAGG
TGTAAAGAAGAGCGCGACAGGAAAAGGAAGTATTCGGACAGCGAATCTAA
CAGTGAAAGTGATTCTGTGAAAAGGAAAAAGAAGAAAGAAAAGAAGAAGA
AAAAGGAGAAGAAGAGCTGGTCATTTAACATTCCAGTGCTTCAACACAGC
GGAAACTTCAGCACCGGTTGATGATGTCGAAAGCACAACATCCGATTCCG
AAGCTGAAATCCAAGAATTGGAAGCTCAGTTGAGGGAGAAAAGAAAACAA
GAAGAGTGTATTGTGGATCGTTTATCGAGCACTGGTCAAAACCAAACACG
TATTGGTTGTCGTAAATGTGGTTATCTACATGAAAGAGAATAAGAATTTG
TTAGGTCCAGTCAGTCTGCCACCGCCACCTAAGAGATCTGAAAACGAAAA
GAGAAAGAGAAAAAGAAGAAAAGAAGCCGGTATTCTTCTTCTTCATCTTC
AAGCGATTAAACGATAAAAGAAGAAGCAATAGTAGTAGAAGAAGGTGTAA
AGAAGAGCGCGACAGGAAAAGGAAGTATTCGGACAGCGAATCTAACAGTG
AAAGTGATTCTGTGAAAAGGAAAAAGAAGAAAGAAAAGAAGAAGAAAAAG
GAGAAGAAGAGCTGGTCATTTAACATTCCAGTGCTTCAACACAGCGGAAA
CTTCAGCACCGGTTGATGATGTCGAAAGCACAACATCCGATTCCGAAGCT
GAAATCCAAGAATTGGAAGCTCAGTTGAGGGAGAAAAGAAAACAAGAAGA
GTGTATTGTGGATCGTTTATCGAGCACTGGTCAAAACCAAACACGTATTG
GTTGTCGTAAATGTGGTTATCTACATGAAAGAGAATAAGAATTTGTTAGG
TCCAGTCAGTCTGCCACCGCCACCTAAGAGATCTGAAAACGAAAAGAGAA
AGAGAAAAAGAAGAAAAGAAGCCGGTATTCTTCTTCTTCATCTTCAAGCG
ATTAAACGATAAAAGAAGAAGCAATAGTAGTAGAAGAAGGTGTAAAGAAG
AGCGCGACAGGAAAAGGAAGTATTCGGACAGCGAATCTAACAGTGAAAGT
GATTCTGTGAAAAGGAAAAAGAAGAAAGAAAAGAAGAAGAAAAAGGAGAA
GAAGAGCTGGTCATTTAACATTCCAGTGCTTCAACACAGCGGAAACTTCA
GCACCGGTTGATGATGTCGAAAGCACAACATCCGATTCCGAAGCTGAAAT
CCAAGAATTGGAAGCTCAGTTGAGGGAGAAAAGAAAACAAGAAGAGTGTA
TTGTGGATCGTTTATCGAGCACTGGTCAAAACCAAACACGTATTGGTTGT
CGTAAATGTGGTTATCTACATGAAAGAGAATAAGAATTTGTTAGGTCCAG
TCAGTCTGCCACCGCCACCTAAGAGATCTGAAAACGAAAAGAGAAAGAGA
AAAAGAAGAAAAGAAGCCGGTATTCTTCTTCTTCATCTTCAAGCGATTAA
ACGATAAAAGAAGAAGCAATAGTAGTAGAAGAAGGTGTAAAGAAGAGCGC
GACAGGAAAAGGAAGTATTCGGACAGCGAATCTAACAGTGAAAGTGATTC
TGTGAAAAGGAAAAAGAAGAAAGAAAAGAAGAAGAAAAAGGAGAAGAAGA
GCTGGTCATTTAACATTCCAGTGCTTCAACACAGCGGAAACTTCAGCACC
GGTTGATGATGTCGAAAGCACAACATCCGATTCCGAAGCTGAAATCCAAG
AATTGGAAGCTCAGTTGAGGGAGAAAAGAAAACAAGAAGAGTGTATTGTG
GATCGTTTATCGAGCACTGGTCAAAACCAAACACGTATTGGTTGTCGTAA
ATGTGGTTATCTACATGAAAGAGAATAAGAATTTGTTAGGTCCAGTCAGT
CTGCCACCGCCACCTAAGAGATCTGAAAACGAAAAGAGAAAGAGAAAAAG
AAGAAAAGAAGCCGGTATTCTTCTTCTTCATCTTCAAGCGATTAAACGAT
AAAAGAAGAAGCAATAGTAGTAGAAGAAGGTGTAAAGAAGAGCGCGACAG
GAAAAGGAAGTATTCGGACAGCGAATCTAACAGTGAAAGTGATTCTGTGA
AAAGGAAAAAGAAGAAAGAAAAGAAGAAGAAAAAGGAGAAGAAGAGCTGG
TCATTTAACATTCCAGTGCTTCAACACAGCGGAAACTTCAGCACCGGTTG
ATGATGTCGAAAGCACAACATCCGATTCCGAAGCTGAAATCCAAGAATTG
GAAGCTCAGTTGAGGGAGAAAAGAAAACAAGAAGAGTGTATTGTGGATCG
TTTATCGAGCACTGGTCAAAACCAAACACGTATTGGTTGTCGTAAATGTG
GTTATCTACATGAAAGAGAATAAGAATTTGTTAGGTCCAGTCAGTCTGCC
ACCGCCACCTAAGAGATCTGAAAACGAAAAGAGAAAGAGAAAAAGAAGAA
AAGAAGCCGGTATTCTTCTTCTTCATCTTCAAGCGATTAAACGATAAAAG
AAGAAGCAATAGTAGTAGAAGAAGGTGTAAAGAAGAGCGCGACAGGAAAA
GGAAGTATTCGGACAGCGAATCTAACAGTGAAAGTGATTCTGTGAAAAGG
AAAAAGAAGAAAGAAAAGAAGAAGAAAAAGGAGAAGAAGAGCTGGTCATT
TAACATTCCAGTGCTTCAACACAGCGGAAACTTCAGCACCGGTTGATGAT
GTCGAAAGCACAACATCCGATTCCGAAGCTGAAATCCAAGAATTGGAAGC
TCAGTTGAGGGAGAAAAGAAAACAAGAAGAGTGTATTGTGGATCGTTTAT
CGAGCACTGGTCAAAACCAAACACGTATTGGTTGTCGTAAATGTGGTTAT
CTACATGAAAGAGAATAAGAATTTGTTAGGTCCAGTCAGTCTGCCACCGC
CACCTAAGAGATCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014000-exon-sc0000175-1575043694:421390..421454 | TCONS_00014000-exon-sc0000175-1575043694:421390..421454 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1575043694:419867..419935 | TCONS_00014000-exon-sc0000175-1575043694:419867..419935 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1575043694:417849..417989 | TCONS_00014000-exon-sc0000175-1575043694:417849..417989 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1575043694:415276..415324 | TCONS_00014000-exon-sc0000175-1575043694:415276..415324 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1575043694:414926..414972 | TCONS_00014000-exon-sc0000175-1575043694:414926..414972 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1575043694:413881..413935 | TCONS_00014000-exon-sc0000175-1575043694:413881..413935 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1575043694:409351..409968 | TCONS_00014000-exon-sc0000175-1575043694:409351..409968 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1510915933:421390..421454 | TCONS_00014000-exon-sc0000175-1510915933:421390..421454 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1510915933:419867..419935 | TCONS_00014000-exon-sc0000175-1510915933:419867..419935 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1510915933:417849..417989 | TCONS_00014000-exon-sc0000175-1510915933:417849..417989 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1510915933:415276..415324 | TCONS_00014000-exon-sc0000175-1510915933:415276..415324 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1510915933:414926..414972 | TCONS_00014000-exon-sc0000175-1510915933:414926..414972 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1510915933:413881..413935 | TCONS_00014000-exon-sc0000175-1510915933:413881..413935 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1510915933:409351..409968 | TCONS_00014000-exon-sc0000175-1510915933:409351..409968 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1491911889:421390..421454 | TCONS_00014000-exon-sc0000175-1491911889:421390..421454 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1491911889:419867..419935 | TCONS_00014000-exon-sc0000175-1491911889:419867..419935 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1491911889:417849..417989 | TCONS_00014000-exon-sc0000175-1491911889:417849..417989 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1491911889:415276..415324 | TCONS_00014000-exon-sc0000175-1491911889:415276..415324 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1491911889:414926..414972 | TCONS_00014000-exon-sc0000175-1491911889:414926..414972 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1491911889:413881..413935 | TCONS_00014000-exon-sc0000175-1491911889:413881..413935 | Clytia hemisphaerica | exon |
| TCONS_00014000-exon-sc0000175-1491911889:409351..409968 | TCONS_00014000-exon-sc0000175-1491911889:409351..409968 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000175 | supercontig | sc0000175:409351..421454 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001878 | Znf_CCHC |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
Blast
The following BLAST results are available for this feature:
|
