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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014016 ID=TCONS_00014016|Name=TCONS_00014016|organism=Clytia hemisphaerica|type=transcript|length=974bp
aaaaaaatacacaattggTGACTCCATTTCGgtatcaaagaaaatatttg
tttctttaaaatgataaaatgtaacaaaaactGAAATAATTATCTCGAAA
ATTCTATGTACTAAGTTCAAAGATTATGATTAATTATTTAAGTCTTAGTC
TTTTAAGTTTAATCATCAGAAGAATCGTCACTATCGGTTTCATCTAAAGA
ATCGCCACTATCGGTTTCATCTGAAGATACTTCACTATCGAAAATTCTTC
TTTCATCAACAATCATGAGATTCGTCGTGCatctcatgatgtaattacat
ATATGGCCATCAAAATCACCCGGGTATGCTCccttgatgatgatgatgtt
atTCCATTCAAAACCGGAAATTAAATCATAGCCCTTAATCAATAAAATGT
TTCCGTCTACGAGAAATTGATATGGACTTTCACCTTCATTGAAATCGTTT
TTGTATATGCCATACCTTTTCCATTTCAATTGCAACTTGTTCAATGTTTG
AAGATCATCATCATCCTCGTATGGAATATCATATATCACTAGCACTCCAT
CGTTCGCGATCTTTCTCATTTCTGTGATGCCGTTTTCAAATGAGTCGGAA
TGGTAGGGTTGTTTTCCATTAGGGTGATTCGGTGGTGGAAGTACTATCCC
TTCTTTATAGAGCGaagtttttctttcttcaaatgCCTCTCTAACGATAC
TTTCACAGTTTCTTAAATTTACGTCAAGTTCATATTTCATGAAATCGTCA
TACATCGAAAGATCTTCATTACCTTTTAAAAGATCCCGATGACCGTACCC
GTTTGATGCAATCCAAATCACATCAACGTGTTCTTTGACTTTCATTATCA
TATCTTTCATTGGATTATTGGGAATATAACACTCATCGATGAATAACGCT
TTGATGTTTCCCGTTCGAATCCTTTTCGTCAGCTTTTCAGTTTCCTCTTT
ATTCTTTTCATCGATATCGGTAAT Run BLAST on NCBI protein sequence of TCONS_00014016-protein >TCONS_00014016-protein ID=TCONS_00014016-protein|Name=TCONS_00014016-protein|organism=Clytia hemisphaerica|type=polypeptide|length=271bp
ITDIDEKNKEETEKLTKRIRTGNIKALFIDECYIPNNPMKDMIMKVKEHV
DVIWIASNGYGHRDLLKGNEDLSMYDDFMKYELDVNLRNCESIVREAFEE
RKTSLYKEGIVLPPPNHPNGKQPYHSDSFENGITEMRKIANDGVLVIYDI
PYEDDDDLQTLNKLQLKWKRYGIYKNDFNEGESPYQFLVDGNILLIKGYD
LISGFEWNNIIIIKGAYPGDFDGHICNYIMRCTTNLMIVDERRIFDSEVS
SDETDSGDSLDETDSDDSSDD Run BLAST on NCBI transcript from alignment at sc0000175:117769..118742 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014016 ID=TCONS_00014016|Name=TCONS_00014016|organism=Clytia hemisphaerica|type=transcript|length=974bp|location=Sequence derived from alignment at sc0000175:117769..118742 (Clytia hemisphaerica)
ATTACCGATATCGATGAAAAGAATAAAGAGGAAACTGAAAAGCTGACGAA
AAGGATTCGAACGGGAAACATCAAAGCGTTATTCATCGATGAGTGTTATA
TTCCCAATAATCCAATGAAAGATATGATAATGAAAGTCAAAGAACACGTT
GATGTGATTTGGATTGCATCAAACGGGTACGGTCATCGGGATCTTTTAAA
AGGTAATGAAGATCTTTCGATGTATGACGATTTCATGAAATATGAACTTG
ACGTAAATTTAAGAAACTGTGAAAGTATCGTTAGAGAGGcatttgaagaa
agaaaaacttCGCTCTATAAAGAAGGGATAGTACTTCCACCACCGAATCA
CCCTAATGGAAAACAACCCTACCATTCCGACTCATTTGAAAACGGCATCA
CAGAAATGAGAAAGATCGCGAACGATGGAGTGCTAGTGATATATGATATT
CCATACGAGGATGATGATGATCTTCAAACATTGAACAAGTTGCAATTGAA
ATGGAAAAGGTATGGCATATACAAAAACGATTTCAATGAAGGTGAAAGTC
CATATCAATTTCTCGTAGACGGAAACATTTTATTGATTAAGGGCTATGAT
TTAATTTCCGGTTTTGAATGGAataacatcatcatcatcaaggGAGCATA
CCCGGGTGATTTTGATGGCCATATatgtaattacatcatgagatGCACGA
CGAATCTCATGATTGTTGATGAAAGAAGAATTTTCGATAGTGAAGTATCT
TCAGATGAAACCGATAGTGGCGATTCTTTAGATGAAACCGATAGTGACGA
TTCTTCTGATGATTAAACTTAAAAGACTAAGACTTAAATAATTAATCATA
ATCTTTGAACTTAGTACATAGAATTTTCGAGATAATTATTTCagtttttg
ttacattttatcattttaaagaaacaaatattttctttgatacCGAAATG
GAGTCAccaattgtgtattttttt Coding sequence (CDS) from alignment at sc0000175:117769..118742 >TCONS_00014016 ID=TCONS_00014016|Name=TCONS_00014016|organism=Clytia hemisphaerica|type=CDS|length=816bp|location=Sequence derived from alignment at sc0000175:117769..118742 (Clytia hemisphaerica)
ATTACCGATATCGATGAAAAGAATAAAGAGGAAACTGAAAAGCTGACGAA
AAGGATTCGAACGGGAAACATCAAAGCGTTATTCATCGATGAGTGTTATA
TTCCCAATAATCCAATGAAAGATATGATAATGAAAGTCAAAGAACACGTT
GATGTGATTTGGATTGCATCAAACGGGTACGGTCATCGGGATCTTTTAAA
AGGTAATGAAGATCTTTCGATGTATGACGATTTCATGAAATATGAACTTG
ACGTAAATTTAAGAAACTGTGAAAGTATCGTTAGAGAGGcatttgaagaa
agaaaaacttCGCTCTATAAAGAAGGGATAGTACTTCCACCACCGAATCA
CCCTAATGGAAAACAACCCTACCATTCCGACTCATTTGAAAACGGCATCA
CAGAAATGAGAAAGATCGCGAACGATGGAGTGCTAGTGATATATGATATT
CCATACGAGGATGATGATGATCTTCAAACATTGAACAAGTTGCAATTGAA
ATGGAAAAGGTATGGCATATACAAAAACGATTTCAATGAAGGTGAAAGTC
CATATCAATTTCTCGTAGACGGAAACATTTTATTGATTAAGGGCTATGAT
TTAATTTCCGGTTTTGAATGGAataacatcatcatcatcaaggGAGCATA
CCCGGGTGATTTTGATGGCCATATatgtaattacatcatgagatGCACGA
CGAATCTCATGATTGTTGATGAAAGAAGAATTTTCGATAGTGAAGTATCT
TCAGATGAAACCGATAGTGGCGATTCTTTAGATGAAACCGATAGTGACGA
TTCTTCTGATGATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014016-exon-sc0000175-1491911889:117769..118742 | TCONS_00014016-exon-sc0000175-1491911889:117769..118742 | Clytia hemisphaerica | exon |
| TCONS_00014016-exon-sc0000175-1510915933:117769..118742 | TCONS_00014016-exon-sc0000175-1510915933:117769..118742 | Clytia hemisphaerica | exon |
| TCONS_00014016-exon-sc0000175-1575043694:117769..118742 | TCONS_00014016-exon-sc0000175-1575043694:117769..118742 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000175 | supercontig | sc0000175:117769..118742 . |
Blast
The following BLAST results are available for this feature:
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