TCONS_00014076 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014076
Unique NameTCONS_00014076
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length100

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014076 ID=TCONS_00014076|Name=TCONS_00014076|organism=Clytia hemisphaerica|type=transcript|length=100bp
AAAGAGCTAAAAATGTCATCAGTCAGTCCaacatttccaaattaaaaCAG
CTTTCATAGTCAAAAACACTGCTGACAGCCTccaaatttgtgtgtttttt
Run BLAST on NCBI

transcript from alignment at sc0000180:20015..20114

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014076 ID=TCONS_00014076|Name=TCONS_00014076|organism=Clytia hemisphaerica|type=transcript|length=100bp|location=Sequence derived from alignment at sc0000180:20015..20114 (Clytia hemisphaerica)
aaaaaacacacaaatttggAGGCTGTCAGCAGTGTTTTTGACTATGAAAG
CTGttttaatttggaaatgttGGACTGACTGATGACATTTTTAGCTCTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007876XLOC_007876Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014076-exon-sc0000180-1491911889:20015..20114TCONS_00014076-exon-sc0000180-1491911889:20015..20114Clytia hemisphaericaexon
TCONS_00014076-exon-sc0000180-1510915933:20015..20114TCONS_00014076-exon-sc0000180-1510915933:20015..20114Clytia hemisphaericaexon
TCONS_00014076-exon-sc0000180-1575043694:20015..20114TCONS_00014076-exon-sc0000180-1575043694:20015..20114Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000180supercontigsc0000180:20015..20114 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014076 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top