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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014086 ID=TCONS_00014086|Name=TCONS_00014086|organism=Clytia hemisphaerica|type=transcript|length=866bp
TAACCTATGAATGGGAAATTTATATTTATCCTCCAATGTGGATTGTTTTC
CAGAATGCTATATGGTACACATTATTAGTGAAATCAATCTATAATCTATT
ACTGATGTCTCTCGAAAGGTTCATCTCTATTAAGTATCCATTTGCGCAAA
TCCATCGAAAATATATCTATTTCGGTATGGTTTTCATTTGGTTTTACACC
ATTGGTGTTTTCATATTCTACTTTTTCCTGCAAGTAGTTCCTGAGGAGCA
ACAATATTACATGCACATGCCTCACTCTGCTGAAGCAGTTGgtttatttg
taaattttgtgaTTCCGATTTTTATAAATACGGGTATTTATGGATACGTG
TATTACATCGTTCGCCGTCAACGTAAACAAATCAGAGCTTTAAGTGTTGG
ACATAATGCACAACAGGAGTCTAATAATAAACGTAGCATGAAGAAAAACA
GGCTGTACACGTATGTTACGTTCGTGTTTGTGGTTCTCTGGCTACCTTGG
TCGTTCTTACAAATTGCAATCTTTATTGACCCTACTATATGGTTCAGTTG
TACTGGTGTTTCTATAGACGGGGTGATGTCGTCTTTAACTTTTATCAATA
ATTTTGCTAATGCTATTATTTATGGGACAACTAATGCTACTTTCAAAAAA
GCGTTAAAAGACATGACAAAGAGATTTTCTAATGAGAGATTTGACACTGA
TTGGAGAAGTAATACAACATCAAACGGAAGGACAACTTCCATTCAAATGA
CttgaaatacagttgacgctctatAATTCAATTCTCatggggaattggat
tttcatcgaataagggagtgtatcgaaaagtagagcgtcgtttatgaatG
TTTCTTATTGACGGTG Run BLAST on NCBI protein sequence of TCONS_00014086-protein >TCONS_00014086-protein ID=TCONS_00014086-protein|Name=TCONS_00014086-protein|organism=Clytia hemisphaerica|type=polypeptide|length=250bp
TYEWEIYIYPPMWIVFQNAIWYTLLVKSIYNLLLMSLERFISIKYPFAQI
HRKYIYFGMVFIWFYTIGVFIFYFFLQVVPEEQQYYMHMPHSAEAVGLFV
NFVIPIFINTGIYGYVYYIVRRQRKQIRALSVGHNAQQESNNKRSMKKNR
LYTYVTFVFVVLWLPWSFLQIAIFIDPTIWFSCTGVSIDGVMSSLTFINN
FANAIIYGTTNATFKKALKDMTKRFSNERFDTDWRSNTTSNGRTTSIQMT Run BLAST on NCBI transcript from alignment at sc0000180:435066..435931 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014086 ID=TCONS_00014086|Name=TCONS_00014086|organism=Clytia hemisphaerica|type=transcript|length=866bp|location=Sequence derived from alignment at sc0000180:435066..435931 (Clytia hemisphaerica)
CACCGTCAATAAGAAACattcataaacgacgctctacttttcgatacact
cccttattcgatgaaaatccaattccccatGAGAATTGAATTatagagcg
tcaactgtatttcaaGTCATTTGAATGGAAGTTGTCCTTCCGTTTGATGT
TGTATTACTTCTCCAATCAGTGTCAAATCTCTCATTAGAAAATCTCTTTG
TCATGTCTTTTAACGCTTTTTTGAAAGTAGCATTAGTTGTCCCATAAATA
ATAGCATTAGCAAAATTATTGATAAAAGTTAAAGACGACATCACCCCGTC
TATAGAAACACCAGTACAACTGAACCATATAGTAGGGTCAATAAAGATTG
CAATTTGTAAGAACGACCAAGGTAGCCAGAGAACCACAAACACGAACGTA
ACATACGTGTACAGCCTGTTTTTCTTCATGCTACGTTTATTATTAGACTC
CTGTTGTGCATTATGTCCAACACTTAAAGCTCTGATTTGTTTACGTTGAC
GGCGAACGATGTAATACACGTATCCATAAATACCCGTATTTATAAAAATC
GGAAtcacaaaatttacaaataaacCAACTGCTTCAGCAGAGTGAGGCAT
GTGCATGTAATATTGTTGCTCCTCAGGAACTACTTGCAGGAAAAAGTAGA
ATATGAAAACACCAATGGTGTAAAACCAAATGAAAACCATACCGAAATAG
ATATATTTTCGATGGATTTGCGCAAATGGATACTTAATAGAGATGAACCT
TTCGAGAGACATCAGTAATAGATTATAGATTGATTTCACTAATAATGTGT
ACCATATAGCATTCTGGAAAACAATCCACATTGGAGGATAAATATAAATT
TCCCATTCATAGGTTA Coding sequence (CDS) from alignment at sc0000180:435066..435931 >TCONS_00014086 ID=TCONS_00014086|Name=TCONS_00014086|organism=Clytia hemisphaerica|type=CDS|length=753bp|location=Sequence derived from alignment at sc0000180:435066..435931 (Clytia hemisphaerica)
tcaaGTCATTTGAATGGAAGTTGTCCTTCCGTTTGATGTTGTATTACTTC
TCCAATCAGTGTCAAATCTCTCATTAGAAAATCTCTTTGTCATGTCTTTT
AACGCTTTTTTGAAAGTAGCATTAGTTGTCCCATAAATAATAGCATTAGC
AAAATTATTGATAAAAGTTAAAGACGACATCACCCCGTCTATAGAAACAC
CAGTACAACTGAACCATATAGTAGGGTCAATAAAGATTGCAATTTGTAAG
AACGACCAAGGTAGCCAGAGAACCACAAACACGAACGTAACATACGTGTA
CAGCCTGTTTTTCTTCATGCTACGTTTATTATTAGACTCCTGTTGTGCAT
TATGTCCAACACTTAAAGCTCTGATTTGTTTACGTTGACGGCGAACGATG
TAATACACGTATCCATAAATACCCGTATTTATAAAAATCGGAAtcacaaa
atttacaaataaacCAACTGCTTCAGCAGAGTGAGGCATGTGCATGTAAT
ATTGTTGCTCCTCAGGAACTACTTGCAGGAAAAAGTAGAATATGAAAACA
CCAATGGTGTAAAACCAAATGAAAACCATACCGAAATAGATATATTTTCG
ATGGATTTGCGCAAATGGATACTTAATAGAGATGAACCTTTCGAGAGACA
TCAGTAATAGATTATAGATTGATTTCACTAATAATGTGTACCATATAGCA
TTCTGGAAAACAATCCACATTGGAGGATAAATATAAATTTCCCATTCATA
GGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014086-exon-sc0000180-1491911889:435066..435931 | TCONS_00014086-exon-sc0000180-1491911889:435066..435931 | Clytia hemisphaerica | exon |
| TCONS_00014086-exon-sc0000180-1510915933:435066..435931 | TCONS_00014086-exon-sc0000180-1510915933:435066..435931 | Clytia hemisphaerica | exon |
| TCONS_00014086-exon-sc0000180-1575043694:435066..435931 | TCONS_00014086-exon-sc0000180-1575043694:435066..435931 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000180 | supercontig | sc0000180:435066..435931 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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