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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014106 ID=TCONS_00014106|Name=TCONS_00014106|organism=Clytia hemisphaerica|type=transcript|length=798bp
NNTtatcattatcattattattttaCAAGAGAATTCAGTCCGTCTATGAA
CCGGGTAAGAAAAAATGAATTCTTTGGTGTCCAAAATGAACATAATTTTG
GCGCAGAAAATTGGGGGCCTTAGGCATGGTCCCCAAATTTCTGCACCAAA
CGTACGTCCTTTTTGGACATGCCATAAGTTACTCGATCCACCATCGAATC
ATTACCAAGAAGTGTTTTTCTATTCCACATAACACCATTACGAACTTTAA
GCAATAGTTGACCATTCATGAAACACAAAATATATTCTACTTTTTGACAG
TCTGGCGAGAGGCATGTCATAATAGCAAAGCATAATAACTTTTTTCCCAT
ATAATGGTCATAGATGAGAGTGGTATTACTGTTTCTGGTGCATGATGAAC
TTTCCAACGATTTTGTAGATCGTTGTGTTGtagtttttatgaaaaacaaa
tTAATCGTTCTTTGAACAAGTATTGAAttaaaacaataataaattgTCGA
GTTCACCAttgtaagtttttgaaaactctGGGTCATCTCCGAGAAGAGTA
AGAAATCTTTCAATGTGTTCATAGTGAAGATAACGGTTGATGTAAAATCT
TCTTTTGTCAATGGTTTTGAAAATACGACATCAATTTGCGCGTTGGCGGC
GGATTTCTGTTGTGAAATGTTTGAAGACTCAGGGTTTTGGGTTTTATCAT
AGGATGGATTTGAGTGAATAGAATACCAGGGCTTCAATTTCGCCGTTGAT
AGTGACGGTATTGACGCCGATGATAAGAGTGACGGCTTTCTAACATAG Run BLAST on NCBI transcript from alignment at sc0000181:87934..89149+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014106 ID=TCONS_00014106|Name=TCONS_00014106|organism=Clytia hemisphaerica|type=transcript|length=1216bp|location=Sequence derived from alignment at sc0000181:87934..89149+ (Clytia hemisphaerica)
NNTtatcattatcattattattttaCAAGAGAATTCAGTCCGTCTATGAA
CCGGGTAAGAAAAAATGAATTCTTTGGTGTCCAAAATGAACATAATTTTG
GCGCAGAAAATTGGGGGCCTTAGGCATGGTCATTTATacgtcaaaagaag
cgtattagcATGTTGATTTCAGAACTGCCTGTTAAtagaataaatttttt
gacttttttaacaaATTCAGGAAAAAGTAATTTATGACGACATAATTTGA
ATATCTCAAAAACTAACGATCAAAATaggaataaaatcaaaataacataa
TCATTTCATAatcttttgataaatacttttcGAGACATTCAAATCATcat
caatgacgtcataaagCACTTTTTccctaatttctcaaaaaagacaaaaa
attaattCTATTAACAGGCAGTTCTGAAATCTACATCCTAATACGCTTCC
TTTGACGCATAAATGACCATGTCTAAGGTCCCCAAATTTCTGCACCAAAC
GTACGTCCTTTTTGGACATGCCATAAGTTACTCGATCCACCATCGAATCA
TTACCAAGAAGTGTTTTTCTATTCCACATTACACCATTACAAACTTTCAG
CAAATCCAATATCGAATCATTACCAAGAAGAGTTTTTCTTGTCCACATAA
CACCATTACGAACTTTAAGCAATAGTTGACCATTCATGAAACACAAAATA
TATTCTACTTTTTGACAGTCTGGCGAGAGGCATGTCATAATAGCAAAGCA
TAATAACTTTTTTCCCATATAATGGTCATAGATGAGAGTGGTATTACTGT
TTCTGGTGCATGATGAACTTTCCAACGATTTTGTAGATCGTTGTGTTGta
gtttttatgaaaaacaaatTAATCGTTCTTTGAACAAGTATTGAAttaaa
acaataataaattgTCGAGTTCACCAttgtaagtttttgaaaactctGGG
TCATCTCCGAGAAGAGTAAGAAATCTTTCAATGTGTTCATAGTGAAGATA
ACGGTTGATGTAAAATCTTCTTTTGTCAATGGTTTTGAAAATACGACATC
AATTTGCGCGTTGGCGGCGGATTTCTGTTGTGAAATGTTTGAAGACTCAG
GGTTTTGGGTTTTATCATAGGATGGATTTGAGTGAATAGAATACCAGGGC
TTCAATTTCGCCGTTGATAGTGACGGTATTGACGCCGATGATAAGAGTGA
CGGCTTTCTAACATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014106-exon-sc0000181-1491911889:87934..88061 | TCONS_00014106-exon-sc0000181-1491911889:87934..88061 | Clytia hemisphaerica | exon |
| TCONS_00014106-exon-sc0000181-1510915933:87934..88061 | TCONS_00014106-exon-sc0000181-1510915933:87934..88061 | Clytia hemisphaerica | exon |
| TCONS_00014106-exon-sc0000181-1575043694:87934..88061 | TCONS_00014106-exon-sc0000181-1575043694:87934..88061 | Clytia hemisphaerica | exon |
| TCONS_00014106-exon-sc0000181-1491911889:88411..88510 | TCONS_00014106-exon-sc0000181-1491911889:88411..88510 | Clytia hemisphaerica | exon |
| TCONS_00014106-exon-sc0000181-1510915933:88411..88510 | TCONS_00014106-exon-sc0000181-1510915933:88411..88510 | Clytia hemisphaerica | exon |
| TCONS_00014106-exon-sc0000181-1575043694:88411..88510 | TCONS_00014106-exon-sc0000181-1575043694:88411..88510 | Clytia hemisphaerica | exon |
| TCONS_00014106-exon-sc0000181-1491911889:88580..89149 | TCONS_00014106-exon-sc0000181-1491911889:88580..89149 | Clytia hemisphaerica | exon |
| TCONS_00014106-exon-sc0000181-1510915933:88580..89149 | TCONS_00014106-exon-sc0000181-1510915933:88580..89149 | Clytia hemisphaerica | exon |
| TCONS_00014106-exon-sc0000181-1575043694:88580..89149 | TCONS_00014106-exon-sc0000181-1575043694:88580..89149 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000181 | supercontig | sc0000181:87934..89149 + |
Blast
The following BLAST results are available for this feature:
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